F315930

General Info

Members Datasets Scaffolds Average Seq Length
207 162 203 241

Family's Representative Sequence

Representative Sequence 3300003784|Ga0055534_1000901|Ga0055534_10009017
Length 259
Sequence MSETSASLNMNAPLAGRVALVTGAAGTMGLAATRALLEDGCRVALVDVQRDRLAALADSLGADAAAFAFAFDIADPQAVHVGHAQVVRALGPVDILVNNAGILSNNKCEATDAAEWRRVLSINLDGAFYLAQQVLPGMKARRSGRIINTCSLAAKTGGLTAGTAYSVSKGALSSLTFSLARELAPFGVTANGISPAYVKTPMITEQLSEAQRQALLKDIPVGRFCEPEEFAHVVRFLASPLAGFITGEIIDLNGGLLMD

Samples

Sample ID Description Type Environment
1 2738543012 Acidovorax sp. CF301 Isolate Unclassified
2 2738543013 Variovorax sp. BT01 Isolate Unclassified
3 2816332133 Acidovorax radicis 2721A Isolate Unclassified
4 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
5 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
6 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
7 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
8 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
9 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
10 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
11 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
12 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
13 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
14 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
15 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
47 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
48 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
49 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
50 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
51 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
52 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
53 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
56 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
57 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
59 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
86 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
87 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
88 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
89 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
90 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
91 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
92 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
96 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
97 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
98 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
101 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
102 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
103 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
104 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
105 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
106 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
107 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
108 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
109 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
110 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
111 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
112 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
113 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
114 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
115 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
116 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
117 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
118 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
119 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
120 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
121 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
122 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
123 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
124 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
125 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
126 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
136 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
137 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
138 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
139 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
140 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
141 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
142 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
143 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
144 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
147 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
148 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
152 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
153 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
154 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
155 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
156 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
157 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
158 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
159 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
160 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
161 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
162 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.07
Metatranscriptomes 0
Isolates 1.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.84
Nodule 0.48
Rhizoplane 2.9
Rhizosphere 66.67
Stem 0
Stem Tuber 0
Unclassified 11.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000009 3300002704 Bacteria 224358
2 JGI25156J39149_1000009 3300002705 Bacteria 224379
3 JGI25154J39366_1000024 3300002738 Bacteria 211372
4 JGI25157J39369_1000007 3300002741 Bacteria 224377
5 JGI25159J45721_1001502 3300002987 Bacteria 9577
6 JGI25151J46595_10043411 3300003187 Bacteria 1609
7 JGI25160J50197_1000240 3300003354 Bacteria 42558
8 JGI25161J50226_1000009 3300003374 Bacteria 224699
9 Ga0055536_1007740 3300003781 Bacteria 4751
10 Ga0055534_1000901 3300003784 Bacteria 13451
11 Ga0055543_1000199 3300004625 Bacteria 49097
12 Ga0070658_10396856 3300005327 Bacteria 1185
13 Ga0070670_100105880 3300005331 Bacteria 2423
14 Ga0070668_100222123 3300005347 Bacteria 1559
15 Ga0070668_100279011 3300005347 Bacteria 1395
16 Ga0070669_100260900 3300005353 Bacteria 1383
17 Ga0070671_100197964 3300005355 Bacteria 1703
18 Ga0070674_100300972 3300005356 Bacteria 1278
19 Ga0070667_100145003 3300005367 Bacteria 2082
20 Ga0070678_100774948 3300005456 Bacteria 869
21 Ga0070662_100191126 3300005457 Bacteria 1619
22 Ga0068867_100238402 3300005459 Bacteria 1474
23 Ga0070672_100035208 3300005543 Bacteria 3805
24 Ga0070665_100005277 3300005548 Bacteria 13348
25 Ga0070704_100101429 3300005549 Bacteria 2170
26 Ga0068863_100923553 3300005841 Bacteria 874
27 Ga0075365_10113567 3300006038 Bacteria 1863
28 Ga0075365_10189375 3300006038 Bacteria 1439
29 Ga0075362_10052293 3300006177 Bacteria 1830
30 Ga0075366_10153297 3300006195 Bacteria 1396
31 Ga0097621_100108414 3300006237 Bacteria 2344
32 Ga0068871_100123612 3300006358 Bacteria 2188
33 Ga0075428_100049267 3300006844 Bacteria 4622
34 Ga0075430_100002790 3300006846 Bacteria 14601
35 Ga0075431_100134562 3300006847 Bacteria 2548
36 Ga0075431_100170430 3300006847 Bacteria 2237
37 Ga0075431_100181803 3300006847 Bacteria 2158
38 Ga0075429_100117773 3300006880 Bacteria 2321
39 Ga0099826_10134028 3300006948 Bacteria 1440
40 Ga0105245_10264573 3300009098 Bacteria 1675
41 Ga0114129_10591691 3300009147 Bacteria 1438
42 Ga0157375_10314296 3300013308 Bacteria 1731
43 Ga0157379_10624450 3300014968 Bacteria 1007
44 Ga0163161_10136653 3300017792 Bacteria 1853
45 Ga0213876_10005337 3300021384 Bacteria 7071
46 Ga0209435_100008 3300025206 Bacteria 503644
47 Ga0209436_101700 3300025208 Bacteria 7253
48 Ga0207425_1006372 3300025245 Bacteria 3234
49 Ga0209646_1000029 3300025246 Bacteria 386414
50 Ga0209026_1000016 3300025250 Bacteria 386457
51 Ga0209759_1000016 3300025256 Bacteria 386414
52 Ga0209130_1000014 3300025284 Bacteria 412039
53 Ga0209130_1004197 3300025284 Bacteria 5624
54 Ga0209675_1001283 3300025291 Bacteria 14924
55 Ga0209675_1003943 3300025291 Bacteria 6800
56 Ga0209676_1003560 3300025292 Bacteria 9415
57 Ga0209676_1005722 3300025292 Bacteria 6385
58 Ga0209025_1012446 3300025294 Bacteria 5449
59 Ga0209025_1012774 3300025294 Bacteria 5345
60 Ga0209025_1017872 3300025294 Bacteria 4063
61 Ga0209025_1032496 3300025294 Bacteria 2437
62 Ga0209758_1014723 3300025297 Bacteria 4130
63 Ga0209050_1012032 3300025298 Bacteria 4022
64 Ga0209050_1038286 3300025298 Bacteria 1369
65 Ga0209050_1040174 3300025298 Bacteria 1307
66 Ga0207426_1000242 3300025302 Bacteria 122839
67 Ga0209051_1024292 3300025303 Bacteria 2495
68 Ga0209257_1009089 3300025304 Bacteria 5433
69 Ga0209257_1015525 3300025304 Bacteria 3162
70 Ga0207656_10111877 3300025321 Bacteria 1263
71 Ga0207682_10059926 3300025893 Bacteria 1591
72 Ga0207650_10146571 3300025925 Bacteria 1860
73 Ga0207644_10205664 3300025931 Bacteria 1554
74 Ga0207704_10257574 3300025938 Bacteria 1314
75 Ga0207704_10646573 3300025938 Bacteria 871
76 Ga0207691_10025614 3300025940 Bacteria 5537
77 Ga0207651_10120062 3300025960 Bacteria 1992
78 Ga0207658_10131632 3300025986 Bacteria 2010
79 Ga0207648_10037790 3300026089 Bacteria 4251
80 Ga0207648_10260092 3300026089 Bacteria 1549
81 Ga0207648_10260424 3300026089 Bacteria 1548
82 Ga0207675_100233042 3300026118 Bacteria 1777
83 Ga0207683_10057216 3300026121 Bacteria 3422
84 Ga0207683_10097968 3300026121 Bacteria 2616
85 Ga0207683_10207030 3300026121 Bacteria 1784
86 Ga0209969_1000814 3300027360 Bacteria 4188
87 Ga0209969_1028918 3300027360 Bacteria 843
88 Ga0209967_1000270 3300027364 Bacteria 7084
89 Ga0209981_1001125 3300027378 Bacteria 3384
90 Ga0209996_1002410 3300027395 Bacteria 2316
91 Ga0210000_1001150 3300027462 Bacteria 3715
92 Ga0209995_1016456 3300027471 Bacteria 1215
93 Ga0209968_1002343 3300027526 Bacteria 2863
94 Ga0209999_1003137 3300027543 Bacteria 2947
95 Ga0209982_1012871 3300027552 Bacteria 1258
96 Ga0209966_1002088 3300027695 Bacteria 3338
97 Ga0209974_10020715 3300027876 Bacteria 2179
98 Ga0268266_10006738 3300028379 Bacteria 10476
99 Ga0307515_10029308 3300028794 Bacteria 9310
100 Ga0307515_10185752 3300028794 Bacteria 2009
101 Ga0265327_10000194 3300031251 Bacteria 129264
102 Ga0307513_10000025 3300031456 Bacteria 202918
103 Ga0307513_10000219 3300031456 Bacteria 82663
104 Ga0307513_10154501 3300031456 Bacteria 2197
105 Ga0307408_100035748 3300031548 Bacteria 3488
106 Ga0307408_100149185 3300031548 Bacteria 1844
107 Ga0307408_100590565 3300031548 Bacteria 985
108 Ga0307514_10005830 3300031649 Bacteria 10880
109 Ga0307516_10004231 3300031730 Bacteria 17873
110 Ga0307516_10129823 3300031730 Bacteria 2300
111 Ga0307413_10232931 3300031824 Bacteria 1354
112 Ga0307410_10151886 3300031852 Bacteria 1725
113 Ga0307412_10063749 3300031911 Bacteria 2488
114 Ga0307412_10177068 3300031911 Bacteria 1600
115 Ga0307409_100015966 3300031995 Bacteria 4950
116 Ga0307416_100102044 3300032002 Bacteria 2500
117 Ga0307416_100484040 3300032002 Bacteria 1298
118 Ga0307416_100877246 3300032002 Bacteria 996
119 Ga0307411_10190172 3300032005 Bacteria 1567
120 Ga0307411_10201692 3300032005 Bacteria 1528
121 Ga0307411_10356895 3300032005 Bacteria 1194
122 Ga0373937_0018936 3300036401 Bacteria 6156
123 Ga0400483_131347 3300039062 Bacteria 2533
124 Ga0400489_58689 3300039093 Bacteria 8102
125 Ga0436365_0788628 3300039437 Bacteria 25640
126 Ga0439436_0000196 3300041404 Bacteria 14457
127 Ga0439447_009743 3300041407 Bacteria 2892
128 Ga0439461_0025246 3300041410 Bacteria 1206
129 Ga0439466_0026161 3300041411 Bacteria 2031
130 Ga0439465_0000099 3300041413 Bacteria 19766
131 Ga0451802_1567369 3300041460 Bacteria 4872
132 Ga0451807_0904091 3300041486 Bacteria 1363
133 Ga0439431_0000556 3300041997 Bacteria 7908
134 Ga0439431_0008888 3300041997 Bacteria 2264
135 Ga0439433_0000436 3300041999 Bacteria 7637
136 Ga0439441_002744 3300042001 Bacteria 2511
137 Ga0439443_039659 3300042003 Bacteria 801
138 Ga0439445_0001215 3300042004 Bacteria 5557
139 Ga0439432_000749 3300042006 Bacteria 12145
140 Ga0439449_0003792 3300042007 Bacteria 5848
141 Ga0439452_001713 3300042010 Bacteria 8607
142 Ga0439454_017322 3300042011 Bacteria 1028
143 Ga0439457_005351 3300042014 Bacteria 3240
144 Ga0439462_0006094 3300042015 Bacteria 2988
145 Ga0439446_0000943 3300042156 Bacteria 6291
146 Ga0439434_0000158 3300042435 Bacteria 18217
147 Ga0439435_0000176 3300042436 Bacteria 8969
148 Ga0439435_0005171 3300042436 Bacteria 2857
149 Ga0450893_0004809 3300042532 Bacteria 2156
150 Ga0451576_0190632 3300045051 Bacteria 2141
151 Ga0495621_0041967 3300046539 Bacteria 1609
152 Ga0495656_0001920 3300046615 Bacteria 6858
153 Ga0495669_0141052 3300046684 Bacteria 1138
154 Ga0495670_0051332 3300046691 Bacteria 2064
155 Ga0496108_0554609 3300048911 Bacteria 1002
156 Ga0496109_0102587 3300048912 Bacteria 2655
157 Ga0496110_0239257 3300048913 Bacteria 1652
158 Ga0496112_0492403 3300048915 Bacteria 1162
159 Ga0501039_0056073 3300049575 Bacteria 3052
160 Ga0501039_0070947 3300049575 Bacteria 2706
161 Ga0501040_0165544 3300049576 Bacteria 1564
162 Ga0501042_0158944 3300049578 Bacteria 1630
163 Ga0501048_0180239 3300049582 Bacteria 1497
164 Ga0501068_0032648 3300049584 Bacteria 3096
165 Ga0501069_0221316 3300049585 Bacteria 1100
166 Ga0501071_0000191 3300049587 Bacteria 27590
167 Ga0501071_0213826 3300049587 Bacteria 1450
168 Ga0501072_0009205 3300049588 Bacteria 7502
169 Ga0501072_0116865 3300049588 Bacteria 2124
170 Ga0501073_0009841 3300049589 Bacteria 7038
171 Ga0501073_0252348 3300049589 Bacteria 1218
172 Ga0501074_0524036 3300049590 Bacteria 839
173 Ga0501075_0008079 3300049591 Bacteria 7317
174 Ga0501075_0055441 3300049591 Bacteria 2982
175 Ga0501076_0029407 3300049592 Bacteria 4273
176 Ga0501077_0030375 3300049593 Bacteria 3438
177 Ga0501079_0057646 3300049741 Bacteria 2997
178 Ga0501079_0069633 3300049741 Bacteria 2716
179 Ga0501080_0001849 3300049742 Bacteria 18173
180 Ga0501080_0209695 3300049742 Bacteria 1786
181 Ga0501080_0221500 3300049742 Bacteria 1731
182 Ga0501080_0546036 3300049742 Bacteria 1032
183 Ga0501081_0002438 3300049743 Bacteria 11741
184 Ga0501081_0074576 3300049743 Bacteria 2367
185 Ga0501083_0134681 3300049744 Bacteria 1619
186 Ga0501283_030187 3300049779 Bacteria 906
187 Ga0501035_0199910 3300049822 Bacteria 1715
188 Ga0501045_0046709 3300049824 Bacteria 3153
189 nmdc:mga03n38_149360_c1 3300050490 Bacteria 1174
190 nmdc:mga00v17_35128_c1 3300050491 Bacteria 2981
191 nmdc:mga0yw44_86190_c1 3300050492 Bacteria 1978
192 nmdc:mga0k408_87981_c1 3300050493 Bacteria 1824
193 nmdc:mga06z11_67394_c1 3300050494 Bacteria 1884
194 nmdc:mga07m45_123030_c1 3300050496 Bacteria 1499
195 nmdc:mga07m45_239300_c1 3300050496 Bacteria 1056
196 nmdc:mga05p37_111312_c1 3300050507 Bacteria 3367
197 nmdc:mga0qj67_2592_c1 3300050509 Bacteria 12941
198 nmdc:mga0qj67_73486_c1 3300050509 Bacteria 2731
199 nmdc:mga06r32_52600_c1 3300050510 Bacteria 3900
200 Ga0500611_003028 3300053727 Bacteria 2101
201 Ga0501082_0152938 3300060353 Bacteria 2004
202 Ga0501082_0224491 3300060353 Bacteria 1635
203 Ga0530510_0004218 3300061734 Bacteria 9938

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006847 Ga0075431_100170430 Ga0075431_1001704302 208
2 3300050509 nmdc:mga0qj67_2592_c1 nmdc:mga0qj67_2592_c1_3372_4034 208
3 3300006844 Ga0075428_100049267 Ga0075428_1000492674 210
4 3300006847 Ga0075431_100134562 Ga0075431_1001345623 210
5 3300006880 Ga0075429_100117773 Ga0075429_1001177733 210
6 3300009147 Ga0114129_10591691 Ga0114129_105916912 210
7 3300027360 Ga0209969_1028918 Ga0209969_10289181 210
8 3300027552 Ga0209982_1012871 Ga0209982_10128712 210
9 3300027695 Ga0209966_1002088 Ga0209966_10020883 210
10 3300006846 Ga0075430_100002790 Ga0075430_1000027909 212
11 3300006847 Ga0075431_100181803 Ga0075431_1001818033 212
12 3300036401 Ga0373937_0018936 Ga0373937_0018936_4005_4748 212
13 3300028794 Ga0307515_10185752 Ga0307515_101857522 215
14 3300031456 Ga0307513_10154501 Ga0307513_101545012 215
15 3300050496 nmdc:mga07m45_123030_c1 nmdc:mga07m45_123030_c1_623_1378 215
16 3300005356 Ga0070674_100300972 Ga0070674_1003009722 218
17 3300027876 Ga0209974_10020715 Ga0209974_100207152 218
18 3300031548 Ga0307408_100035748 Ga0307408_1000357483 218
19 3300032002 Ga0307416_100102044 Ga0307416_1001020443 218
20 3300032002 Ga0307416_100877246 Ga0307416_1008772462 218
21 3300032005 Ga0307411_10201692 Ga0307411_102016922 218
22 3300041410 Ga0439461_0025246 Ga0439461_0025246_26_715 218
23 3300041997 Ga0439431_0008888 Ga0439431_0008888_1295_1984 218
24 3300042001 Ga0439441_002744 Ga0439441_002744_25_717 218
25 3300042011 Ga0439454_017322 Ga0439454_017322_211_903 218
26 3300042436 Ga0439435_0000176 Ga0439435_0000176_3262_3951 218
27 3300050507 nmdc:mga05p37_111312_c1 nmdc:mga05p37_111312_c1_2398_3090 218
28 3300049575 Ga0501039_0056073 Ga0501039_0056073_201_908 219
29 3300050490 nmdc:mga03n38_149360_c1 nmdc:mga03n38_149360_c1_293_1039 224
30 3300039093 Ga0400489_58689 Ga0400489_58689_812_1558 225
31 3300027360 Ga0209969_1000814 Ga0209969_10008143 226
32 3300027364 Ga0209967_1000270 Ga0209967_10002701 226
33 3300027378 Ga0209981_1001125 Ga0209981_10011253 226
34 3300027462 Ga0210000_1001150 Ga0210000_10011504 226
35 3300027471 Ga0209995_1016456 Ga0209995_10164562 226
36 3300027526 Ga0209968_1002343 Ga0209968_10023433 226
37 3300027543 Ga0209999_1003137 Ga0209999_10031374 226
38 3300031548 Ga0307408_100590565 Ga0307408_1005905652 226
39 3300031911 Ga0307412_10063749 Ga0307412_100637492 226
40 3300042003 Ga0439443_039659 Ga0439443_039659_77_769 226
41 3300042436 Ga0439435_0005171 Ga0439435_0005171_1633_2325 226
42 3300049779 Ga0501283_030187 Ga0501283_030187_64_756 226
43 3300049822 Ga0501035_0199910 Ga0501035_0199910_917_1609 226
44 3300049576 Ga0501040_0165544 Ga0501040_0165544_748_1455 227
45 3300049578 Ga0501042_0158944 Ga0501042_0158944_673_1368 227
46 3300049582 Ga0501048_0180239 Ga0501048_0180239_652_1359 227
47 3300049587 Ga0501071_0213826 Ga0501071_0213826_689_1396 227
48 3300049588 Ga0501072_0009205 Ga0501072_0009205_2581_3288 227
49 3300049591 Ga0501075_0055441 Ga0501075_0055441_806_1513 227
50 3300049592 Ga0501076_0029407 Ga0501076_0029407_2815_3522 227
51 3300049741 Ga0501079_0069633 Ga0501079_0069633_903_1610 227
52 3300049742 Ga0501080_0221500 Ga0501080_0221500_342_1049 227
53 3300049743 Ga0501081_0002438 Ga0501081_0002438_10150_10857 227
54 3300049824 Ga0501045_0046709 Ga0501045_0046709_1583_2290 227
55 3300060353 Ga0501082_0152938 Ga0501082_0152938_590_1297 227
56 3300061734 Ga0530510_0004218 Ga0530510_0004218_7499_8206 227
57 3300005549 Ga0070704_100101429 Ga0070704_1001014292 228
58 3300027395 Ga0209996_1002410 Ga0209996_10024102 228
59 3300049589 Ga0501073_0252348 Ga0501073_0252348_482_1180 228
60 3300049742 Ga0501080_0546036 Ga0501080_0546036_17_715 228
61 3300050509 nmdc:mga0qj67_73486_c1 nmdc:mga0qj67_73486_c1_1014_1712 228
62 3300050510 nmdc:mga06r32_52600_c1 nmdc:mga06r32_52600_c1_2713_3411 228
63 3300048915 Ga0496112_0492403 Ga0496112_0492403_88_777 229
64 3300049575 Ga0501039_0070947 Ga0501039_0070947_1034_1741 229
65 3300049584 Ga0501068_0032648 Ga0501068_0032648_844_1551 229
66 3300049587 Ga0501071_0000191 Ga0501071_0000191_24357_25064 229
67 3300049588 Ga0501072_0116865 Ga0501072_0116865_1276_1983 229
68 3300049589 Ga0501073_0009841 Ga0501073_0009841_5272_5979 229
69 3300049591 Ga0501075_0008079 Ga0501075_0008079_6024_6731 229
70 3300049741 Ga0501079_0057646 Ga0501079_0057646_839_1546 229
71 3300049742 Ga0501080_0001849 Ga0501080_0001849_15004_15711 229
72 3300049743 Ga0501081_0074576 Ga0501081_0074576_1032_1739 229
73 3300049744 Ga0501083_0134681 Ga0501083_0134681_15_722 229
74 3300032002 Ga0307416_100484040 Ga0307416_1004840403 230
75 3300026089 Ga0207648_10037790 Ga0207648_100377906 235
76 3300021384 Ga0213876_10005337 Ga0213876_100053376 239
77 3300039437 Ga0436365_0788628 Ga0436365_0788628_2156_2878 239
78 3300031649 Ga0307514_10005830 Ga0307514_100058305 242
79 3300028794 Ga0307515_10029308 Ga0307515_100293088 244
80 3300031730 Ga0307516_10129823 Ga0307516_101298232 244
81 3300039062 Ga0400483_131347 Ga0400483_131347_1775_2512 244
82 3300045051 Ga0451576_0190632 Ga0451576_0190632_351_1097 244
83 iso_pu_bacteria 2738543012 2739244071 244
84 iso_pu_bacteria 2816332133 2816472396 244
85 3300005457 Ga0070662_100191126 Ga0070662_1001911262 246
86 3300009098 Ga0105245_10264573 Ga0105245_102645732 246
87 3300025938 Ga0207704_10257574 Ga0207704_102575742 246
88 3300025960 Ga0207651_10120062 Ga0207651_101200623 246
89 3300026089 Ga0207648_10260092 Ga0207648_102600922 246
90 3300026121 Ga0207683_10097968 Ga0207683_100979683 246
91 3300049585 Ga0501069_0221316 Ga0501069_0221316_154_897 246
92 3300049590 Ga0501074_0524036 Ga0501074_0524036_50_793 246
93 3300049742 Ga0501080_0209695 Ga0501080_0209695_808_1551 246
94 3300053727 Ga0500611_003028 Ga0500611_003028_1288_2031 246
95 3300002704 JGI25155J39150_1000009 JGI25155J39150_100000979 247
96 3300002705 JGI25156J39149_1000009 JGI25156J39149_1000009141 247
97 3300002738 JGI25154J39366_1000024 JGI25154J39366_1000024141 247
98 3300002741 JGI25157J39369_1000007 JGI25157J39369_1000007141 247
99 3300002987 JGI25159J45721_1001502 JGI25159J45721_10015029 247
100 3300003187 JGI25151J46595_10043411 JGI25151J46595_100434112 247
101 3300003354 JGI25160J50197_1000240 JGI25160J50197_100024033 247
102 3300003374 JGI25161J50226_1000009 JGI25161J50226_100000980 247
103 3300003781 Ga0055536_1007740 Ga0055536_10077402 247
104 3300003784 Ga0055534_1000901 Ga0055534_10009017 247
105 3300004625 Ga0055543_1000199 Ga0055543_100019933 247
106 3300005327 Ga0070658_10396856 Ga0070658_103968561 247
107 3300005331 Ga0070670_100105880 Ga0070670_1001058802 247
108 3300005347 Ga0070668_100222123 Ga0070668_1002221232 247
109 3300005347 Ga0070668_100279011 Ga0070668_1002790112 247
110 3300005353 Ga0070669_100260900 Ga0070669_1002609002 247
111 3300005355 Ga0070671_100197964 Ga0070671_1001979642 247
112 3300005367 Ga0070667_100145003 Ga0070667_1001450032 247
113 3300005456 Ga0070678_100774948 Ga0070678_1007749481 247
114 3300005459 Ga0068867_100238402 Ga0068867_1002384022 247
115 3300005543 Ga0070672_100035208 Ga0070672_1000352083 247
116 3300005548 Ga0070665_100005277 Ga0070665_1000052774 247
117 3300005841 Ga0068863_100923553 Ga0068863_1009235531 247
118 3300006038 Ga0075365_10113567 Ga0075365_101135672 247
119 3300006038 Ga0075365_10189375 Ga0075365_101893751 247
120 3300006177 Ga0075362_10052293 Ga0075362_100522932 247
121 3300006195 Ga0075366_10153297 Ga0075366_101532972 247
122 3300006237 Ga0097621_100108414 Ga0097621_1001084142 247
123 3300006358 Ga0068871_100123612 Ga0068871_1001236122 247
124 3300006948 Ga0099826_10134028 Ga0099826_101340281 247
125 3300013308 Ga0157375_10314296 Ga0157375_103142962 247
126 3300014968 Ga0157379_10624450 Ga0157379_106244502 247
127 3300017792 Ga0163161_10136653 Ga0163161_101366532 247
128 3300025206 Ga0209435_100008 Ga0209435_10000847 247
129 3300025208 Ga0209436_101700 Ga0209436_1017007 247
130 3300025245 Ga0207425_1006372 Ga0207425_10063723 247
131 3300025246 Ga0209646_1000029 Ga0209646_1000029231 247
132 3300025250 Ga0209026_1000016 Ga0209026_1000016231 247
133 3300025256 Ga0209759_1000016 Ga0209759_1000016231 247
134 3300025284 Ga0209130_1000014 Ga0209130_1000014146 247
135 3300025284 Ga0209130_1004197 Ga0209130_10041975 247
136 3300025291 Ga0209675_1001283 Ga0209675_100128313 247
137 3300025291 Ga0209675_1003943 Ga0209675_10039436 247
138 3300025292 Ga0209676_1003560 Ga0209676_10035602 247
139 3300025292 Ga0209676_1005722 Ga0209676_10057226 247
140 3300025294 Ga0209025_1012446 Ga0209025_10124466 247
141 3300025294 Ga0209025_1012774 Ga0209025_10127743 247
142 3300025294 Ga0209025_1017872 Ga0209025_10178722 247
143 3300025294 Ga0209025_1032496 Ga0209025_10324963 247
144 3300025297 Ga0209758_1014723 Ga0209758_10147232 247
145 3300025298 Ga0209050_1012032 Ga0209050_10120323 247
146 3300025298 Ga0209050_1038286 Ga0209050_10382862 247
147 3300025298 Ga0209050_1040174 Ga0209050_10401742 247
148 3300025302 Ga0207426_1000242 Ga0207426_100024233 247
149 3300025303 Ga0209051_1024292 Ga0209051_10242923 247
150 3300025304 Ga0209257_1009089 Ga0209257_10090892 247
151 3300025304 Ga0209257_1015525 Ga0209257_10155253 247
152 3300025321 Ga0207656_10111877 Ga0207656_101118772 247
153 3300025893 Ga0207682_10059926 Ga0207682_100599262 247
154 3300025925 Ga0207650_10146571 Ga0207650_101465712 247
155 3300025931 Ga0207644_10205664 Ga0207644_102056642 247
156 3300025938 Ga0207704_10646573 Ga0207704_106465731 247
157 3300025940 Ga0207691_10025614 Ga0207691_100256143 247
158 3300025986 Ga0207658_10131632 Ga0207658_101316322 247
159 3300026089 Ga0207648_10260424 Ga0207648_102604242 247
160 3300026118 Ga0207675_100233042 Ga0207675_1002330422 247
161 3300026121 Ga0207683_10057216 Ga0207683_100572162 247
162 3300026121 Ga0207683_10207030 Ga0207683_102070302 247
163 3300028379 Ga0268266_10006738 Ga0268266_100067383 247
164 3300031251 Ga0265327_10000194 Ga0265327_1000019446 247
165 3300031456 Ga0307513_10000025 Ga0307513_1000002539 247
166 3300031456 Ga0307513_10000219 Ga0307513_1000021951 247
167 3300031548 Ga0307408_100149185 Ga0307408_1001491852 247
168 3300031730 Ga0307516_10004231 Ga0307516_100042314 247
169 3300031824 Ga0307413_10232931 Ga0307413_102329312 247
170 3300031852 Ga0307410_10151886 Ga0307410_101518862 247
171 3300031911 Ga0307412_10177068 Ga0307412_101770682 247
172 3300031995 Ga0307409_100015966 Ga0307409_1000159662 247
173 3300032005 Ga0307411_10190172 Ga0307411_101901722 247
174 3300032005 Ga0307411_10356895 Ga0307411_103568952 247
175 3300041404 Ga0439436_0000196 Ga0439436_0000196_7504_8262 247
176 3300041407 Ga0439447_009743 Ga0439447_009743_1560_2318 247
177 3300041411 Ga0439466_0026161 Ga0439466_0026161_863_1621 247
178 3300041413 Ga0439465_0000099 Ga0439465_0000099_960_1718 247
179 3300041460 Ga0451802_1567369 Ga0451802_1567369_2759_3514 247
180 3300041486 Ga0451807_0904091 Ga0451807_0904091_266_1021 247
181 3300041997 Ga0439431_0000556 Ga0439431_0000556_5674_6432 247
182 3300041999 Ga0439433_0000436 Ga0439433_0000436_3234_3992 247
183 3300042004 Ga0439445_0001215 Ga0439445_0001215_1058_1816 247
184 3300042006 Ga0439432_000749 Ga0439432_000749_2907_3665 247
185 3300042007 Ga0439449_0003792 Ga0439449_0003792_3530_4288 247
186 3300042010 Ga0439452_001713 Ga0439452_001713_6172_6930 247
187 3300042014 Ga0439457_005351 Ga0439457_005351_1561_2319 247
188 3300042015 Ga0439462_0006094 Ga0439462_0006094_13_771 247
189 3300042156 Ga0439446_0000943 Ga0439446_0000943_1478_2236 247
190 3300042435 Ga0439434_0000158 Ga0439434_0000158_5260_6018 247
191 3300042532 Ga0450893_0004809 Ga0450893_0004809_1289_2035 247
192 3300046539 Ga0495621_0041967 Ga0495621_0041967_608_1366 247
193 3300046615 Ga0495656_0001920 Ga0495656_0001920_4501_5259 247
194 3300046684 Ga0495669_0141052 Ga0495669_0141052_48_806 247
195 3300046691 Ga0495670_0051332 Ga0495670_0051332_554_1312 247
196 3300048911 Ga0496108_0554609 Ga0496108_0554609_67_816 247
197 3300048912 Ga0496109_0102587 Ga0496109_0102587_782_1531 247
198 3300048913 Ga0496110_0239257 Ga0496110_0239257_710_1459 247
199 3300049593 Ga0501077_0030375 Ga0501077_0030375_2622_3365 247
200 3300050491 nmdc:mga00v17_35128_c1 nmdc:mga00v17_35128_c1_575_1318 247
201 3300050492 nmdc:mga0yw44_86190_c1 nmdc:mga0yw44_86190_c1_278_1024 247
202 3300050493 nmdc:mga0k408_87981_c1 nmdc:mga0k408_87981_c1_159_905 247
203 3300050494 nmdc:mga06z11_67394_c1 nmdc:mga06z11_67394_c1_920_1666 247
204 3300050496 nmdc:mga07m45_239300_c1 nmdc:mga07m45_239300_c1_159_905 247
205 3300060353 Ga0501082_0224491 Ga0501082_0224491_492_1247 247
206 iso_pu_bacteria 2738543013 2739252136 247
207 iso_pu_bacteria 2945972063 2945974077 247

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

17

211

0.96

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

23

257

0.93

PF08659

KR

KR domain

18

190

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
5cdy-assembly1.cif.gz_C the crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (fabg) from yersinia pestis at 2.85a resolution 0.9676 4 243
5cdy-assembly1.cif.gz_B the crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (fabg) from yersinia pestis at 2.85a resolution 0.9669 5 243
4wjz-assembly1.cif.gz_A crystal structure of beta-ketoacyl-acyl carrier protein reductase (fabg)(g141a) from vibrio cholerae 0.9649 1 243
5cdy-assembly1.cif.gz_A the crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (fabg) from yersinia pestis at 2.85a resolution 0.9638 4 242
1i01-assembly2.cif.gz_H crystal structure of beta-ketoacyl [acyl carrier protein] reductase from e. coli. 0.9597 5 243
ID Description Score Start End Superfamily
3grpC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9533 1 244 3.40.50.720
1ulsC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9512 4 242 3.40.50.720
4iboB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.951 4 242 3.40.50.720
4cqmK00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9503 5 239 3.40.50.720
4npcA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9496 2 243 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4P1AN66-F1-model_v4 deleted 0.973 4 237
AF-A0A843RIW2-F1-model_v4 SDR family oxidoreductase 0.9713 11 247 GO:0016491
AF-A0A6A5KVW5-F1-model_v4 deleted 0.9711 4 242
AF-A0A2V7GJT3-F1-model_v4 Beta-ketoacyl-ACP reductase 0.9701 2 185 GO:0016491
AF-A0A2X1JAJ9-F1-model_v4 3-oxoacyl-ACP reductase (EC 1.1.1.100) 0.9647 4 211 GO:0004316

Feature Viewer

pLDDT pTM Quality
92.51 0.92 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map