F315399

General Info

Members Datasets Scaffolds Average Seq Length
206 146 206 521

Family's Representative Sequence

Representative Sequence 3300038443|Ga0395901_0146655|Ga0395901_0146655_685_2307
Length 540
Sequence MTMTLADAPLDERSRTEILSDDALAFLAELHGRFGRRRRELLAARAERHAALRAGGTLDFLAETREIRAGDWQVAAPRDDYADRRVEITGPTDRKLVINALNSGARGFMADFEDANSPTWVNQVSGHANLVDAIEGTITYNSSDGRHYALADDTATLLVRPRGWHLDERHLAFDDGEAFAGAFLDFGLFAFHGAPRLHARGLGAYLYLPKLEHHLEARLWEDVLTFSEEALGLPRGTFRATVLIETLPAAFQMDEILYELRDHSYGLNAGRWDYIFSMIKSFRDRPEFVLPDRNDVKMTVPFMSAYAQLLVKTCHARGAFAMGGMAALIPSRTDPEANQRAIDAVRADKEREAGLGFDGTWVAHPDVVPVALEAFDAVLPDRPNQIDRRRDDVQVGAAELLDAASTPGAITEAGLRNDLSVGFQYISFWLGGRGAAGINNLMEDAATAEISRSQVWQWIRHGVRLEDGRIVTRELVRTLLDEELAKIRSAVGEETWAAGRPEQTRAIFEQVALGEDFPEFLTIPAYELLDDGPARNGATS

Samples

Sample ID Description Type Environment
1 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
33 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
36 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
66 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
67 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
68 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
69 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
70 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
71 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
72 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
73 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
78 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
79 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
80 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
81 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
82 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
83 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
84 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
85 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
86 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
87 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
90 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
91 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
92 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
93 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
94 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
95 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
96 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
97 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
100 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
101 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
104 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
105 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
108 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
109 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
110 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
111 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
112 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
113 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
114 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
115 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
116 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
131 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
132 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
135 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
136 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
137 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
140 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
142 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
145 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
146 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.97
Nodule 0
Rhizoplane 10.68
Rhizosphere 81.55
Stem 0
Stem Tuber 0
Unclassified 6.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10042097 3300005328 Bacteria 2650
2 Ga0070683_100005009 3300005329 Bacteria 10992
3 Ga0070683_100227049 3300005329 Bacteria 1775
4 Ga0070670_100106949 3300005331 Bacteria 2411
5 Ga0068868_100002571 3300005338 Bacteria 12592
6 Ga0070687_100054355 3300005343 Bacteria 2086
7 Ga0070661_100008747 3300005344 Bacteria 7007
8 Ga0070669_100045954 3300005353 Bacteria 3183
9 Ga0070667_100009482 3300005367 Bacteria 8076
10 Ga0070714_100000037 3300005435 Bacteria 124801
11 Ga0070701_10032517 3300005438 Bacteria 2598
12 Ga0070700_100008607 3300005441 Bacteria 5559
13 Ga0070662_100083938 3300005457 Bacteria 2378
14 Ga0070684_100055111 3300005535 Bacteria 3465
15 Ga0068853_100089854 3300005539 Bacteria 2698
16 Ga0070665_100026250 3300005548 Bacteria 5866
17 Ga0070665_100029456 3300005548 Bacteria 5526
18 Ga0068857_100052143 3300005577 Bacteria 3630
19 Ga0068852_100021661 3300005616 Bacteria 5138
20 Ga0068864_100004978 3300005618 Bacteria 10892
21 Ga0068863_100015918 3300005841 Bacteria 7214
22 Ga0068858_100044713 3300005842 Bacteria 4104
23 Ga0081538_10000688 3300005981 Bacteria 37095
24 Ga0081538_10004281 3300005981 Bacteria 13209
25 Ga0081538_10041730 3300005981 Bacteria 2906
26 Ga0081539_10020164 3300005985 Bacteria 4523
27 Ga0070717_10012390 3300006028 Bacteria 6502
28 Ga0075428_100028263 3300006844 Bacteria 6202
29 Ga0075433_10009493 3300006852 Bacteria 7774
30 Ga0075433_10087934 3300006852 Bacteria 2745
31 Ga0111539_10029818 3300009094 Bacteria 6639
32 Ga0111539_10035339 3300009094 Bacteria 6051
33 Ga0105245_10006777 3300009098 Bacteria 10043
34 Ga0105245_10042483 3300009098 Bacteria 4056
35 Ga0105245_10165934 3300009098 Bacteria 2099
36 Ga0105249_10072199 3300009553 Bacteria 3190
37 Ga0105239_10185213 3300010375 Bacteria 2330
38 Ga0157378_10053123 3300013297 Bacteria 3607
39 Ga0163163_10003351 3300014325 Bacteria 13597
40 Ga0157377_10030152 3300014745 Bacteria 2935
41 Ga0157376_10050847 3300014969 Bacteria 3440
42 Ga0213876_10015704 3300021384 Bacteria 4008
43 Ga0213876_10019109 3300021384 Bacteria 3618
44 Ga0207426_1028694 3300025302 Bacteria 1842
45 Ga0207692_10011240 3300025898 Bacteria 3800
46 Ga0207688_10040736 3300025901 Bacteria 2581
47 Ga0207680_10001823 3300025903 Bacteria 10036
48 Ga0207645_10059122 3300025907 Bacteria 2448
49 Ga0207643_10026412 3300025908 Bacteria 3214
50 Ga0207663_10058848 3300025916 Bacteria 2428
51 Ga0207662_10046316 3300025918 Bacteria 2573
52 Ga0207657_10129691 3300025919 Bacteria 2068
53 Ga0207681_10043797 3300025923 Bacteria 2997
54 Ga0207659_10004613 3300025926 Bacteria 8339
55 Ga0207687_10011480 3300025927 Bacteria 5788
56 Ga0207687_10139545 3300025927 Bacteria 1837
57 Ga0207700_10031893 3300025928 Bacteria 3750
58 Ga0207664_10000020 3300025929 Bacteria 218362
59 Ga0207664_10087617 3300025929 Bacteria 2545
60 Ga0207706_10009231 3300025933 Bacteria 9064
61 Ga0207709_10044612 3300025935 Bacteria 2680
62 Ga0207669_10060266 3300025937 Bacteria 2326
63 Ga0207711_10166233 3300025941 Bacteria 2000
64 Ga0207689_10022889 3300025942 Bacteria 5248
65 Ga0207689_10081932 3300025942 Bacteria 2653
66 Ga0207661_10049735 3300025944 Bacteria 3338
67 Ga0207661_10074838 3300025944 Bacteria 2777
68 Ga0207679_10015267 3300025945 Bacteria 5069
69 Ga0207658_10002490 3300025986 Bacteria 13426
70 Ga0207678_10043500 3300026067 Bacteria 3886
71 Ga0207708_10009048 3300026075 Bacteria 7367
72 Ga0207708_10015898 3300026075 Bacteria 5650
73 Ga0207674_10011290 3300026116 Bacteria 10039
74 Ga0207674_10110489 3300026116 Bacteria 2724
75 Ga0207674_10156904 3300026116 Bacteria 2231
76 Ga0207675_100141812 3300026118 Bacteria 2283
77 Ga0207675_100188493 3300026118 Bacteria 1977
78 Ga0207683_10076055 3300026121 Bacteria 2973
79 Ga0207428_10049747 3300027907 Bacteria 3357
80 Ga0268266_10000336 3300028379 Bacteria 73612
81 Ga0268266_10038227 3300028379 Bacteria 4087
82 Ga0268266_10138308 3300028379 Bacteria 2183
83 Ga0268264_10074274 3300028381 Bacteria 2888
84 Ga0265326_10000005 3300028558 Bacteria 257124
85 Ga0265334_10000024 3300028573 Bacteria 118525
86 Ga0265336_10004541 3300028666 Bacteria 5233
87 Ga0265338_10002617 3300028800 Bacteria 26582
88 Ga0265324_10029394 3300029957 Bacteria 1932
89 Ga0307409_100030568 3300031995 Bacteria 3872
90 Ga0307415_100000566 3300032126 Bacteria 16208
91 Ga0307415_100077215 3300032126 Bacteria 2364
92 Ga0307415_100154622 3300032126 Bacteria 1769
93 Ga0373941_0006580 3300035115 Bacteria 2806
94 Ga0373955_0040629 3300035172 Bacteria 2489
95 Ga0373937_0030288 3300036401 Bacteria 4901
96 Ga0395901_0146655 3300038443 Bacteria 2480
97 Ga0436365_0528908 3300039437 Bacteria 14388
98 Ga0436365_1120470 3300039437 Bacteria 2142
99 Ga0436365_1246114 3300039437 Bacteria 5760
100 Ga0436363_0357411 3300039450 Bacteria 40060
101 Ga0436362_0293302 3300039453 Bacteria 3246
102 Ga0466966_0131485 3300044684 Bacteria 1532
103 Ga0466961_0012527 3300044693 Bacteria 5427
104 Ga0466961_0029401 3300044693 Bacteria 3533
105 Ga0466963_0016772 3300044694 Bacteria 4558
106 Ga0466963_0021902 3300044694 Bacteria 4040
107 Ga0466963_0034041 3300044694 Bacteria 3313
108 Ga0466963_0055986 3300044694 Bacteria 2623
109 Ga0466963_0185371 3300044694 Bacteria 1453
110 Ga0466971_0000312 3300044719 Bacteria 18692
111 Ga0466971_0019687 3300044719 Bacteria 2999
112 Ga0466959_0000609 3300045049 Bacteria 20893
113 Ga0466959_0011199 3300045049 Bacteria 6434
114 Ga0466959_0049723 3300045049 Bacteria 3080
115 Ga0466958_0000990 3300045836 Bacteria 12838
116 Ga0466958_0001386 3300045836 Bacteria 11467
117 Ga0466958_0036037 3300045836 Bacteria 2959
118 Ga0466958_0067153 3300045836 Bacteria 2190
119 Ga0466958_0090171 3300045836 Bacteria 1897
120 Ga0466967_0005356 3300045976 Bacteria 8871
121 Ga0466967_0008940 3300045976 Bacteria 7394
122 Ga0466967_0027283 3300045976 Bacteria 4748
123 Ga0466967_0095027 3300045976 Bacteria 2716
124 Ga0466967_0117165 3300045976 Bacteria 2455
125 Ga0495664_0087891 3300046477 Bacteria 1868
126 Ga0495608_0007861 3300046511 Bacteria 7494
127 Ga0495587_0019932 3300046536 Bacteria 4145
128 Ga0495625_0000787 3300046660 Bacteria 43981
129 Ga0495657_0007025 3300046675 Bacteria 8735
130 Ga0495646_0031634 3300046680 Bacteria 3296
131 Ga0495674_0052149 3300047319 Bacteria 3601
132 Ga0495680_0005065 3300047322 Bacteria 12439
133 Ga0495675_0017292 3300047444 Bacteria 4569
134 Ga0495684_0042093 3300047471 Bacteria 3499
135 Ga0495686_0022969 3300047472 Bacteria 4120
136 Ga0495602_0013680 3300048088 Bacteria 8278
137 Ga0496100_0107173 3300048903 Bacteria 1935
138 Ga0496102_0028895 3300048905 Bacteria 4956
139 Ga0496103_0040091 3300048906 Bacteria 2878
140 Ga0496104_0020131 3300048907 Bacteria 6113
141 Ga0496104_0031044 3300048907 Bacteria 4967
142 Ga0496104_0034553 3300048907 Bacteria 4715
143 Ga0496105_0002953 3300048908 Bacteria 12487
144 Ga0496105_0107304 3300048908 Bacteria 2305
145 Ga0496107_0035079 3300048910 Bacteria 3596
146 Ga0496108_0009125 3300048911 Bacteria 8028
147 Ga0496109_0014277 3300048912 Bacteria 6911
148 Ga0496109_0114110 3300048912 Bacteria 2513
149 Ga0496110_0007301 3300048913 Bacteria 8816
150 Ga0496110_0210792 3300048913 Bacteria 1766
151 Ga0496111_0004175 3300048914 Bacteria 9091
152 Ga0496112_0011585 3300048915 Bacteria 8061
153 Ga0496112_0088816 3300048915 Bacteria 3059
154 Ga0496112_0162263 3300048915 Bacteria 2201
155 Ga0496112_0217230 3300048915 Bacteria 1868
156 Ga0496113_0013540 3300048916 Bacteria 5532
157 Ga0496113_0084045 3300048916 Bacteria 2443
158 Ga0496113_0110858 3300048916 Bacteria 2136
159 Ga0496118_0001682 3300048921 Bacteria 32356
160 Ga0496119_0006370 3300048922 Bacteria 10973
161 Ga0496121_0000537 3300048924 Bacteria 72149
162 Ga0496121_0044476 3300048924 Bacteria 3829
163 Ga0496124_0062430 3300048927 Bacteria 3118
164 Ga0496125_0044207 3300048928 Bacteria 3770
165 Ga0496126_0013919 3300048929 Bacteria 8161
166 Ga0496126_0028023 3300048929 Bacteria 5372
167 Ga0501031_0005722 3300049568 Bacteria 8101
168 Ga0501032_0007355 3300049569 Bacteria 8047
169 Ga0501033_0003291 3300049570 Bacteria 13350
170 Ga0501034_0002081 3300049571 Bacteria 24989
171 Ga0501036_0008987 3300049572 Bacteria 8216
172 Ga0501036_0049918 3300049572 Bacteria 3544
173 Ga0501036_0073988 3300049572 Bacteria 2881
174 Ga0501037_0000608 3300049573 Bacteria 27799
175 Ga0501038_0006003 3300049574 Bacteria 11235
176 Ga0501038_0057176 3300049574 Bacteria 3349
177 Ga0501039_0039462 3300049575 Bacteria 3647
178 Ga0501039_0048832 3300049575 Bacteria 3271
179 Ga0501039_0100661 3300049575 Bacteria 2255
180 Ga0501041_0020697 3300049577 Bacteria 3936
181 Ga0501042_0087738 3300049578 Bacteria 2232
182 Ga0501043_0008574 3300049579 Bacteria 8058
183 Ga0501046_0010168 3300049580 Bacteria 8096
184 Ga0501047_0000270 3300049581 Bacteria 60001
185 Ga0501048_0000374 3300049582 Bacteria 31047
186 Ga0501071_0163548 3300049587 Bacteria 1664
187 Ga0501073_0007642 3300049589 Bacteria 8023
188 Ga0501074_0130264 3300049590 Bacteria 1800
189 Ga0501076_0065934 3300049592 Bacteria 2889
190 Ga0501079_0130789 3300049741 Bacteria 1953
191 Ga0501081_0052345 3300049743 Bacteria 2817
192 Ga0501083_0006791 3300049744 Bacteria 8122
193 Ga0501035_0000643 3300049822 Bacteria 38500
194 Ga0501044_0000527 3300049823 Bacteria 46627
195 Ga0501044_0153135 3300049823 Bacteria 2287
196 Ga0501045_0082125 3300049824 Bacteria 2376
197 nmdc:mga0a205_18474_c1 3300050515 Bacteria 6558
198 Ga0495619_0018222 3300053085 Bacteria 4453
199 Ga0500646_0005516 3300053090 Bacteria 3199
200 Ga0501084_0013291 3300054114 Bacteria 6812
201 Ga0501082_0010221 3300060353 Bacteria 8080
202 Ga0466962_0010728 3300061719 Bacteria 4404
203 Ga0466962_0017178 3300061719 Bacteria 3486
204 Ga0466962_0061904 3300061719 Bacteria 1786
205 Ga0530510_0008017 3300061734 Bacteria 7367
206 Ga0530510_0027600 3300061734 Bacteria 4068

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044694 Ga0466963_0185371 Ga0466963_0185371_11_1255 414
2 3300044684 Ga0466966_0131485 Ga0466966_0131485_23_1327 434
3 3300048915 Ga0496112_0217230 Ga0496112_0217230_483_1829 448
4 3300035115 Ga0373941_0006580 Ga0373941_0006580_25_1392 449
5 3300025935 Ga0207709_10044612 Ga0207709_100446122 474
6 3300026075 Ga0207708_10015898 Ga0207708_100158982 480
7 3300009553 Ga0105249_10072199 Ga0105249_100721992 495
8 3300010375 Ga0105239_10185213 Ga0105239_101852132 495
9 3300025901 Ga0207688_10040736 Ga0207688_100407362 495
10 3300025942 Ga0207689_10022889 Ga0207689_100228893 495
11 3300026118 Ga0207675_100141812 Ga0207675_1001418122 495
12 3300049572 Ga0501036_0073988 Ga0501036_0073988_1160_2704 495
13 3300049575 Ga0501039_0048832 Ga0501039_0048832_1565_3109 495
14 3300049577 Ga0501041_0020697 Ga0501041_0020697_137_1681 495
15 3300049578 Ga0501042_0087738 Ga0501042_0087738_453_1997 495
16 3300049592 Ga0501076_0065934 Ga0501076_0065934_1036_2580 495
17 3300005438 Ga0070701_10032517 Ga0070701_100325172 496
18 3300005539 Ga0068853_100089854 Ga0068853_1000898542 496
19 3300005616 Ga0068852_100021661 Ga0068852_1000216612 496
20 3300005842 Ga0068858_100044713 Ga0068858_1000447134 496
21 3300009098 Ga0105245_10042483 Ga0105245_100424834 496
22 3300013297 Ga0157378_10053123 Ga0157378_100531234 496
23 3300014745 Ga0157377_10030152 Ga0157377_100301522 496
24 3300025908 Ga0207643_10026412 Ga0207643_100264122 496
25 3300026121 Ga0207683_10076055 Ga0207683_100760552 496
26 3300006852 Ga0075433_10009493 Ga0075433_100094938 505
27 3300050515 nmdc:mga0a205_18474_c1 nmdc:mga0a205_18474_c1_724_2298 505
28 3300006852 Ga0075433_10087934 Ga0075433_100879342 507
29 3300032126 Ga0307415_100077215 Ga0307415_1000772152 509
30 3300039437 Ga0436365_1120470 Ga0436365_1120470_38_1630 511
31 3300005618 Ga0068864_100004978 Ga0068864_1000049782 512
32 3300005841 Ga0068863_100015918 Ga0068863_1000159182 512
33 3300014325 Ga0163163_10003351 Ga0163163_100033512 512
34 3300025941 Ga0207711_10166233 Ga0207711_101662332 512
35 3300025944 Ga0207661_10074838 Ga0207661_100748382 512
36 3300048907 Ga0496104_0034553 Ga0496104_0034553_222_1796 512
37 3300048911 Ga0496108_0009125 Ga0496108_0009125_856_2430 512
38 3300048912 Ga0496109_0014277 Ga0496109_0014277_4946_6520 512
39 3300048913 Ga0496110_0007301 Ga0496110_0007301_6453_8027 512
40 3300048914 Ga0496111_0004175 Ga0496111_0004175_5537_7111 512
41 3300048915 Ga0496112_0162263 Ga0496112_0162263_482_2056 512
42 3300049575 Ga0501039_0039462 Ga0501039_0039462_745_2283 512
43 3300049587 Ga0501071_0163548 Ga0501071_0163548_111_1649 512
44 3300049743 Ga0501081_0052345 Ga0501081_0052345_260_1798 512
45 3300049824 Ga0501045_0082125 Ga0501045_0082125_746_2284 512
46 3300054114 Ga0501084_0013291 Ga0501084_0013291_4686_6224 512
47 3300061734 Ga0530510_0008017 Ga0530510_0008017_1315_2853 512
48 3300005985 Ga0081539_10020164 Ga0081539_100201642 513
49 3300044694 Ga0466963_0021902 Ga0466963_0021902_1134_2678 513
50 3300005981 Ga0081538_10000688 Ga0081538_100006882 514
51 3300005981 Ga0081538_10041730 Ga0081538_100417302 514
52 3300009098 Ga0105245_10165934 Ga0105245_101659342 514
53 3300025927 Ga0207687_10139545 Ga0207687_101395452 514
54 3300025937 Ga0207669_10060266 Ga0207669_100602662 514
55 3300025942 Ga0207689_10081932 Ga0207689_100819322 514
56 3300032126 Ga0307415_100000566 Ga0307415_1000005669 514
57 3300045049 Ga0466959_0049723 Ga0466959_0049723_1057_2604 514
58 3300045976 Ga0466967_0027283 Ga0466967_0027283_1808_3355 514
59 3300049572 Ga0501036_0049918 Ga0501036_0049918_1657_3201 514
60 3300049574 Ga0501038_0057176 Ga0501038_0057176_319_1863 514
61 3300061734 Ga0530510_0027600 Ga0530510_0027600_1778_3322 514
62 3300005329 Ga0070683_100227049 Ga0070683_1002270492 515
63 3300005981 Ga0081538_10004281 Ga0081538_100042819 515
64 3300006844 Ga0075428_100028263 Ga0075428_1000282633 515
65 3300009094 Ga0111539_10035339 Ga0111539_100353393 515
66 3300025302 Ga0207426_1028694 Ga0207426_10286942 515
67 3300027907 Ga0207428_10049747 Ga0207428_100497472 515
68 3300044694 Ga0466963_0055986 Ga0466963_0055986_516_2063 515
69 3300045836 Ga0466958_0090171 Ga0466958_0090171_226_1773 515
70 3300045976 Ga0466967_0005356 Ga0466967_0005356_6615_8162 515
71 3300045976 Ga0466967_0008940 Ga0466967_0008940_2219_3766 515
72 3300045976 Ga0466967_0117165 Ga0466967_0117165_488_2035 515
73 3300046660 Ga0495625_0000787 Ga0495625_0000787_11573_13168 515
74 3300048913 Ga0496110_0210792 Ga0496110_0210792_174_1721 515
75 3300048915 Ga0496112_0088816 Ga0496112_0088816_252_1799 515
76 3300048924 Ga0496121_0000537 Ga0496121_0000537_24441_26000 517
77 3300026118 Ga0207675_100188493 Ga0207675_1001884932 518
78 3300048907 Ga0496104_0020131 Ga0496104_0020131_153_1748 519
79 3300048908 Ga0496105_0002953 Ga0496105_0002953_2225_3820 519
80 3300048910 Ga0496107_0035079 Ga0496107_0035079_32_1627 519
81 3300048922 Ga0496119_0006370 Ga0496119_0006370_5176_6771 519
82 3300048928 Ga0496125_0044207 Ga0496125_0044207_667_2262 519
83 3300025919 Ga0207657_10129691 Ga0207657_101296912 522
84 3300044693 Ga0466961_0029401 Ga0466961_0029401_765_2351 522
85 3300044694 Ga0466963_0016772 Ga0466963_0016772_1080_2666 522
86 3300044694 Ga0466963_0034041 Ga0466963_0034041_146_1735 522
87 3300044719 Ga0466971_0019687 Ga0466971_0019687_198_1784 522
88 3300045049 Ga0466959_0000609 Ga0466959_0000609_12715_14301 522
89 3300045049 Ga0466959_0011199 Ga0466959_0011199_195_1784 522
90 3300045836 Ga0466958_0000990 Ga0466958_0000990_7209_8795 522
91 3300045836 Ga0466958_0067153 Ga0466958_0067153_50_1639 522
92 3300061719 Ga0466962_0061904 Ga0466962_0061904_70_1659 522
93 3300005577 Ga0068857_100052143 Ga0068857_1000521432 523
94 3300025898 Ga0207692_10011240 Ga0207692_100112403 523
95 3300025916 Ga0207663_10058848 Ga0207663_100588482 523
96 3300025928 Ga0207700_10031893 Ga0207700_100318932 523
97 3300025929 Ga0207664_10087617 Ga0207664_100876172 523
98 3300026116 Ga0207674_10110489 Ga0207674_101104892 523
99 3300035172 Ga0373955_0040629 Ga0373955_0040629_794_2386 523
100 3300036401 Ga0373937_0030288 Ga0373937_0030288_2010_3602 523
101 3300038443 Ga0395901_0146655 Ga0395901_0146655_685_2307 523
102 3300045836 Ga0466958_0036037 Ga0466958_0036037_810_2402 523
103 3300046477 Ga0495664_0087891 Ga0495664_0087891_85_1677 523
104 3300046511 Ga0495608_0007861 Ga0495608_0007861_1995_3587 523
105 3300046536 Ga0495587_0019932 Ga0495587_0019932_588_2180 523
106 3300046675 Ga0495657_0007025 Ga0495657_0007025_5934_7526 523
107 3300046680 Ga0495646_0031634 Ga0495646_0031634_1159_2751 523
108 3300047319 Ga0495674_0052149 Ga0495674_0052149_192_1784 523
109 3300047322 Ga0495680_0005065 Ga0495680_0005065_7713_9305 523
110 3300047444 Ga0495675_0017292 Ga0495675_0017292_1999_3591 523
111 3300047471 Ga0495684_0042093 Ga0495684_0042093_807_2399 523
112 3300048088 Ga0495602_0013680 Ga0495602_0013680_5477_7069 523
113 3300048907 Ga0496104_0031044 Ga0496104_0031044_1369_2961 523
114 3300048915 Ga0496112_0011585 Ga0496112_0011585_1361_2953 523
115 3300048916 Ga0496113_0013540 Ga0496113_0013540_1227_2819 523
116 3300048916 Ga0496113_0110858 Ga0496113_0110858_469_2061 523
117 3300053085 Ga0495619_0018222 Ga0495619_0018222_1818_3410 523
118 3300053090 Ga0500646_0005516 Ga0500646_0005516_114_1685 523
119 3300005367 Ga0070667_100009482 Ga0070667_1000094825 524
120 3300005435 Ga0070714_100000037 Ga0070714_10000003748 524
121 3300005548 Ga0070665_100026250 Ga0070665_1000262505 524
122 3300005548 Ga0070665_100029456 Ga0070665_1000294564 524
123 3300006028 Ga0070717_10012390 Ga0070717_100123903 524
124 3300014969 Ga0157376_10050847 Ga0157376_100508471 524
125 3300021384 Ga0213876_10015704 Ga0213876_100157043 524
126 3300021384 Ga0213876_10019109 Ga0213876_100191092 524
127 3300025903 Ga0207680_10001823 Ga0207680_100018237 524
128 3300025929 Ga0207664_10000020 Ga0207664_10000020146 524
129 3300025944 Ga0207661_10049735 Ga0207661_100497352 524
130 3300025986 Ga0207658_10002490 Ga0207658_1000249011 524
131 3300026116 Ga0207674_10156904 Ga0207674_101569042 524
132 3300028379 Ga0268266_10000336 Ga0268266_1000033665 524
133 3300028379 Ga0268266_10038227 Ga0268266_100382274 524
134 3300028379 Ga0268266_10138308 Ga0268266_101383082 524
135 3300028558 Ga0265326_10000005 Ga0265326_10000005113 524
136 3300028573 Ga0265334_10000024 Ga0265334_1000002439 524
137 3300028666 Ga0265336_10004541 Ga0265336_100045412 524
138 3300028800 Ga0265338_10002617 Ga0265338_100026173 524
139 3300029957 Ga0265324_10029394 Ga0265324_100293942 524
140 3300032126 Ga0307415_100154622 Ga0307415_1001546221 524
141 3300039437 Ga0436365_0528908 Ga0436365_0528908_10565_12160 524
142 3300039437 Ga0436365_1246114 Ga0436365_1246114_3763_5361 524
143 3300039450 Ga0436363_0357411 Ga0436363_0357411_32498_34096 524
144 3300039453 Ga0436362_0293302 Ga0436362_0293302_477_2072 524
145 3300044693 Ga0466961_0012527 Ga0466961_0012527_348_1943 524
146 3300044719 Ga0466971_0000312 Ga0466971_0000312_1170_2765 524
147 3300045836 Ga0466958_0001386 Ga0466958_0001386_486_2081 524
148 3300045976 Ga0466967_0095027 Ga0466967_0095027_357_1952 524
149 3300047472 Ga0495686_0022969 Ga0495686_0022969_845_2440 524
150 3300048903 Ga0496100_0107173 Ga0496100_0107173_310_1914 524
151 3300048905 Ga0496102_0028895 Ga0496102_0028895_2482_4077 524
152 3300048906 Ga0496103_0040091 Ga0496103_0040091_403_1998 524
153 3300048908 Ga0496105_0107304 Ga0496105_0107304_586_2190 524
154 3300048912 Ga0496109_0114110 Ga0496109_0114110_104_1708 524
155 3300048916 Ga0496113_0084045 Ga0496113_0084045_561_2165 524
156 3300048921 Ga0496118_0001682 Ga0496118_0001682_11132_12727 524
157 3300048924 Ga0496121_0044476 Ga0496121_0044476_1987_3582 524
158 3300048927 Ga0496124_0062430 Ga0496124_0062430_457_2055 524
159 3300048929 Ga0496126_0013919 Ga0496126_0013919_4272_5867 524
160 3300048929 Ga0496126_0028023 Ga0496126_0028023_3532_5127 524
161 3300049568 Ga0501031_0005722 Ga0501031_0005722_6348_7943 524
162 3300049569 Ga0501032_0007355 Ga0501032_0007355_6318_7913 524
163 3300049570 Ga0501033_0003291 Ga0501033_0003291_6356_7951 524
164 3300049571 Ga0501034_0002081 Ga0501034_0002081_23253_24848 524
165 3300049572 Ga0501036_0008987 Ga0501036_0008987_6494_8089 524
166 3300049573 Ga0501037_0000608 Ga0501037_0000608_19706_21301 524
167 3300049574 Ga0501038_0006003 Ga0501038_0006003_3397_4992 524
168 3300049575 Ga0501039_0100661 Ga0501039_0100661_563_2158 524
169 3300049579 Ga0501043_0008574 Ga0501043_0008574_6354_7949 524
170 3300049580 Ga0501046_0010168 Ga0501046_0010168_129_1724 524
171 3300049581 Ga0501047_0000270 Ga0501047_0000270_28743_30338 524
172 3300049582 Ga0501048_0000374 Ga0501048_0000374_143_1738 524
173 3300049589 Ga0501073_0007642 Ga0501073_0007642_6245_7840 524
174 3300049590 Ga0501074_0130264 Ga0501074_0130264_177_1772 524
175 3300049741 Ga0501079_0130789 Ga0501079_0130789_102_1697 524
176 3300049744 Ga0501083_0006791 Ga0501083_0006791_149_1744 524
177 3300049822 Ga0501035_0000643 Ga0501035_0000643_36719_38314 524
178 3300049823 Ga0501044_0000527 Ga0501044_0000527_6469_8064 524
179 3300049823 Ga0501044_0153135 Ga0501044_0153135_285_1877 524
180 3300060353 Ga0501082_0010221 Ga0501082_0010221_6352_7947 524
181 3300061719 Ga0466962_0010728 Ga0466962_0010728_1986_3581 524
182 3300061719 Ga0466962_0017178 Ga0466962_0017178_1266_2861 524
183 3300005328 Ga0070676_10042097 Ga0070676_100420972 525
184 3300005329 Ga0070683_100005009 Ga0070683_1000050094 525
185 3300005331 Ga0070670_100106949 Ga0070670_1001069492 525
186 3300005338 Ga0068868_100002571 Ga0068868_1000025717 525
187 3300005343 Ga0070687_100054355 Ga0070687_1000543552 525
188 3300005344 Ga0070661_100008747 Ga0070661_1000087472 525
189 3300005353 Ga0070669_100045954 Ga0070669_1000459542 525
190 3300005441 Ga0070700_100008607 Ga0070700_1000086072 525
191 3300005457 Ga0070662_100083938 Ga0070662_1000839382 525
192 3300005535 Ga0070684_100055111 Ga0070684_1000551112 525
193 3300009094 Ga0111539_10029818 Ga0111539_100298185 525
194 3300009098 Ga0105245_10006777 Ga0105245_100067773 525
195 3300025907 Ga0207645_10059122 Ga0207645_100591221 525
196 3300025918 Ga0207662_10046316 Ga0207662_100463162 525
197 3300025923 Ga0207681_10043797 Ga0207681_100437972 525
198 3300025926 Ga0207659_10004613 Ga0207659_100046133 525
199 3300025927 Ga0207687_10011480 Ga0207687_100114804 525
200 3300025933 Ga0207706_10009231 Ga0207706_100092312 525
201 3300025945 Ga0207679_10015267 Ga0207679_100152672 525
202 3300026067 Ga0207678_10043500 Ga0207678_100435002 525
203 3300026075 Ga0207708_10009048 Ga0207708_100090482 525
204 3300026116 Ga0207674_10011290 Ga0207674_100112904 525
205 3300028381 Ga0268264_10074274 Ga0268264_100742742 525
206 3300031995 Ga0307409_100030568 Ga0307409_1000305682 525

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01274

MS_TIM-barrel

Malate synthase, TIM barrel domain

156

403

0.98

PF20659

MS_C

Malate synthase, C-terminal

409

529

0.96

PF20656

MS_N

Malate synthase, N-terminal domain

10

66

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cux-assembly1.cif.gz_A atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design 0.9689 4 524
3cv2-assembly1.cif.gz_A atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design 0.9687 4 525
3cux-assembly1.cif.gz_A atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design 0.965 4 524
3cv2-assembly1.cif.gz_A atomic resolution structures of escherichia coli and bacillis anthracis malate synthase a: comparison with isoform g and implications for structure based drug design 0.9632 4 525
7yqm-assembly1.cif.gz_A 2.9-angstrom cryo-em structure of ecoli malate synthase g 0.8256 101 507
ID Description Score Start End Superfamily
af_A0A1D6E7V9_424_548_1.20.1220.12 Mainly Alpha;Up-down Bundle;Malate Synthase G; Chain: A; Domain 4;Malate synthase, domain III 0.9715 406 525 1.20.1220.12
3cv2A02 Mainly Alpha;Up-down Bundle;Malate Synthase G; Chain: A; Domain 4;Malate synthase, domain III 0.9683 406 525 1.20.1220.12
3cuxA02 Mainly Alpha;Up-down Bundle;Malate Synthase G; Chain: A; Domain 4;Malate synthase, domain III 0.9679 405 524 1.20.1220.12
af_Q10663_846_963_1.20.1220.12 Mainly Alpha;Up-down Bundle;Malate Synthase G; Chain: A; Domain 4;Malate synthase, domain III 0.966 406 524 1.20.1220.12
3cuxA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Malate synthase, domain 3 0.9632 4 403 3.20.20.360
ID Description Score Start End GO Terms
AF-A0A0K2QXZ3-F1-model_v4 deleted 1.002 180 278
AF-A0A6N9XW18-F1-model_v4 deleted 1.001 203 280
AF-A0A7X6ITL4-F1-model_v4 deleted 0.9998 405 480
AF-R4HJS4-F1-model_v4 Malate synthase (EC 2.3.3.9) 0.998 212 320 GO:0004474
GO:0006097
GO:0006099
GO:0009514
AF-A0A365CWD9-F1-model_v4 Malate synthase (EC 2.3.3.9) 0.9977 185 396 GO:0004474
GO:0005737
GO:0006097
GO:0006099

Feature Viewer

pLDDT pTM Quality
95.19 0.94 High
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Predicted Structure (AlphaFold2)

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