F315040

General Info

Members Datasets Scaffolds Average Seq Length
206 133 412 159

Family's Representative Sequence

Representative Sequence 3300009098|Ga0105245_10062882|Ga0105245_100628822
Length 186
Sequence MRLAELLSPDRIAIRKPAASGGNGHGSEHKLDKNGALHELAGMLGRGTSTDAAEVERVLAEREALQSTGIGEGVAIPHGALTDVAAQCAALLLVPEGLDFSSIDDREVHILFAVVGPKKATGEHLRTLARVSRLLKSAEFRGKLLSQESPAAAFDLIATEENNTLAPAPYRDKDAGGVDRDRGGKT

Samples

Sample ID Description Type Environment
1 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
59 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
60 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
61 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
62 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
64 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
65 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
66 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
69 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
73 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
74 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
75 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
76 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
77 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
78 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
79 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
80 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
81 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
82 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
83 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
84 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
85 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
86 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
87 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
88 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
91 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
92 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
95 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
96 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
97 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
98 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
99 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
100 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
101 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
102 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
103 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
104 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
105 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
106 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
107 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
110 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
113 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
119 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
120 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
121 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
122 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
123 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
124 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
125 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
126 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
127 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
130 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
131 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
132 3300059639 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 3R_CW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
133 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.54
Metatranscriptomes 1.46
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.88
Nodule 0
Rhizoplane 7.28
Rhizosphere 76.7
Stem 0
Stem Tuber 0
Unclassified 19.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105245_10062882 3300009098 Bacteria 3350
2 rootH2_10010790 3300003320 Bacteria 1865
3 rootH2_10050987 3300003320 Bacteria 23211
4 rootH2_10089208 3300003320 Bacteria 1316
5 rootH2_10224370 3300003320 Bacteria 2500
6 rootL2_10135840 3300003322 Bacteria 1362
7 rootL2_10206242 3300003322 Bacteria 3161
8 rootL2_10273159 3300003322 Bacteria 1919
9 rootH1_10018189 3300003323 Bacteria 1853
10 rootH1_10165149 3300003323 Bacteria 2036
11 rootH1_10165150 3300003323 Bacteria 1573
12 rootH1_10314655 3300003323 Bacteria 2104
13 Ga0070683_100125036 3300005329 Bacteria 2431
14 Ga0070683_101565798 3300005329 Bacteria 634
15 Ga0070677_10095270 3300005333 Bacteria 1302
16 Ga0070682_100001483 3300005337 Bacteria 13163
17 Ga0070682_100001977 3300005337 Bacteria 11425
18 Ga0070682_100240807 3300005337 Bacteria 1298
19 Ga0068868_100023539 3300005338 Bacteria 4662
20 Ga0070689_100014022 3300005340 Bacteria 5815
21 Ga0070673_100811797 3300005364 Bacteria 864
22 Ga0070688_100231121 3300005365 Bacteria 1308
23 Ga0070688_100243583 3300005365 Bacteria 1277
24 Ga0070688_100676615 3300005365 Unclassified 797
25 Ga0070700_101451851 3300005441 Bacteria 581
26 Ga0070694_100210962 3300005444 Bacteria 1452
27 Ga0070678_100065850 3300005456 Bacteria 2692
28 Ga0068867_100005823 3300005459 Bacteria 8741
29 Ga0070685_10120100 3300005466 Bacteria 1631
30 Ga0070698_100788024 3300005471 Bacteria 894
31 Ga0070684_100284933 3300005535 Bacteria 1514
32 Ga0070684_100609635 3300005535 Bacteria 1015
33 Ga0070684_100865860 3300005535 Bacteria 846
34 Ga0070672_100000141 3300005543 Bacteria 38703
35 Ga0070672_100161767 3300005543 Bacteria 1858
36 Ga0070695_100334752 3300005545 Unclassified 1129
37 Ga0070693_101098595 3300005547 Unclassified 606
38 Ga0070704_100127657 3300005549 Bacteria 1965
39 Ga0068855_100000039 3300005563 Bacteria 154012
40 Ga0068855_100240862 3300005563 Bacteria 2021
41 Ga0068855_101183017 3300005563 Bacteria 796
42 Ga0068856_100083572 3300005614 Unclassified 3171
43 Ga0068856_100550883 3300005614 Bacteria 1174
44 Ga0068859_100021142 3300005617 Bacteria 6530
45 Ga0068859_101934642 3300005617 Unclassified 651
46 Ga0068864_100293493 3300005618 Unclassified 1520
47 Ga0068864_100334673 3300005618 Bacteria 1425
48 Ga0068870_10119147 3300005840 Bacteria 1518
49 Ga0068863_100810269 3300005841 Bacteria 934
50 Ga0068858_100573718 3300005842 Bacteria 1093
51 Ga0075366_10023718 3300006195 Bacteria 3575
52 Ga0075366_10225215 3300006195 Unclassified 1142
53 Ga0075366_10305330 3300006195 Bacteria 974
54 Ga0075366_10602004 3300006195 Bacteria 681
55 Ga0068871_100112255 3300006358 Bacteria 2293
56 Ga0068865_101195200 3300006881 Bacteria 673
57 Ga0097620_100021142 3300006931 Bacteria 6530
58 Ga0097620_101934306 3300006931 Unclassified 651
59 Ga0075435_100006482 3300007076 Bacteria 8281
60 Ga0111539_10008691 3300009094 Bacteria 12889
61 Ga0111539_10030165 3300009094 Bacteria 6595
62 Ga0111539_10545514 3300009094 Unclassified 1351
63 Ga0111539_11659296 3300009094 Bacteria 741
64 Ga0105245_10032843 3300009098 Bacteria 4597
65 Ga0105247_10007106 3300009101 Bacteria 6877
66 Ga0114129_10439741 3300009147 Bacteria 1712
67 Ga0105241_10009488 3300009174 Bacteria 7146
68 Ga0105242_10226401 3300009176 Bacteria 1674
69 Ga0105242_10522109 3300009176 Bacteria 1133
70 Ga0105239_10331730 3300010375 Bacteria 1716
71 Ga0157374_10193537 3300013296 Bacteria 1989
72 Ga0157376_10012467 3300014969 Bacteria 6312
73 Ga0207682_10083782 3300025893 Bacteria 1371
74 Ga0207642_10038369 3300025899 Unclassified 2073
75 Ga0207710_10004699 3300025900 Bacteria 5925
76 Ga0207687_10002044 3300025927 Bacteria 13832
77 Ga0207687_10048360 3300025927 Bacteria 2952
78 Ga0207686_10242781 3300025934 Bacteria 1312
79 Ga0207686_11002245 3300025934 Bacteria 678
80 Ga0207670_10027310 3300025936 Bacteria 3606
81 Ga0207704_10422043 3300025938 Bacteria 1058
82 Ga0207704_10566653 3300025938 Bacteria 925
83 Ga0207691_10003213 3300025940 Bacteria 15941
84 Ga0207661_10057825 3300025944 Bacteria 3120
85 Ga0207661_10572528 3300025944 Bacteria 1036
86 Ga0207667_10000085 3300025949 Bacteria 151830
87 Ga0207667_10174253 3300025949 Bacteria 2210
88 Ga0207667_10737045 3300025949 Bacteria 986
89 Ga0207677_10004608 3300026023 Bacteria 7413
90 Ga0207702_10072455 3300026078 Unclassified 2969
91 Ga0207702_10472838 3300026078 Bacteria 1219
92 Ga0207641_10247891 3300026088 Bacteria 1662
93 Ga0207641_10620611 3300026088 Unclassified 1060
94 Ga0207676_10417402 3300026095 Bacteria 1258
95 Ga0207683_10083497 3300026121 Bacteria 2839
96 Ga0207428_10055719 3300027907 Unclassified 3142
97 Ga0265319_1000063 3300028563 Bacteria 85553
98 Ga0265318_10000294 3300028577 Bacteria 40800
99 Ga0265318_10001851 3300028577 Bacteria 11952
100 Ga0265338_10114151 3300028800 Bacteria 2168
101 Ga0265760_10091156 3300031090 Bacteria 954
102 Ga0265330_10000111 3300031235 Bacteria 68148
103 Ga0265330_10029787 3300031235 Bacteria 2453
104 Ga0265332_10000221 3300031238 Bacteria 45722
105 Ga0265328_10007037 3300031239 Bacteria 4718
106 Ga0265328_10123240 3300031239 Bacteria 968
107 Ga0265328_10200352 3300031239 Unclassified 758
108 Ga0265320_10000196 3300031240 Bacteria 49836
109 Ga0265320_10106629 3300031240 Bacteria 1287
110 Ga0265325_10000958 3300031241 Bacteria 20886
111 Ga0265329_10000156 3300031242 Bacteria 33725
112 Ga0265340_10001464 3300031247 Bacteria 13540
113 Ga0265340_10002529 3300031247 Bacteria 10389
114 Ga0265340_10005275 3300031247 Bacteria 7175
115 Ga0265339_10001735 3300031249 Bacteria 16063
116 Ga0265339_10010484 3300031249 Bacteria 5755
117 Ga0265331_10001500 3300031250 Bacteria 17225
118 Ga0265331_10030236 3300031250 Bacteria 2697
119 Ga0265331_10095005 3300031250 Bacteria 1376
120 Ga0265316_10000482 3300031344 Bacteria 45282
121 Ga0265316_10001042 3300031344 Bacteria 30024
122 Ga0265316_10042643 3300031344 Bacteria 3625
123 Ga0265316_10135672 3300031344 Bacteria 1851
124 Ga0307513_10495974 3300031456 Unclassified 939
125 Ga0307513_10546793 3300031456 Unclassified 871
126 Ga0265313_10000189 3300031595 Bacteria 65848
127 Ga0265313_10001115 3300031595 Bacteria 25682
128 Ga0307508_10001013 3300031616 Bacteria 32706
129 Ga0307514_10264438 3300031649 Unclassified 1003
130 Ga0316579_10015323 3300031691 Unclassified 3327
131 Ga0265314_10000001 3300031711 Bacteria 3792860
132 Ga0265314_10000379 3300031711 Bacteria 60808
133 Ga0265314_10594873 3300031711 Unclassified 570
134 Ga0265342_10000313 3300031712 Bacteria 55198
135 Ga0265342_10129750 3300031712 Unclassified 1413
136 Ga0316576_10062833 3300031727 Unclassified 2724
137 Ga0316576_10105232 3300031727 Bacteria 2112
138 Ga0316578_10003337 3300031728 Bacteria 7316
139 Ga0307516_10094575 3300031730 Unclassified 2812
140 Ga0307507_10056734 3300033179 Bacteria 3697
141 Ga0307510_10322635 3300033180 Bacteria 1001
142 Ga0373944_0336602 3300035089 Bacteria 572
143 Ga0373956_0099494 3300035119 Bacteria 1348
144 Ga0373956_0375312 3300035119 Bacteria 678
145 Ga0373935_0997507 3300035692 Unclassified 622
146 Ga0373933_0005425 3300035724 Bacteria 6940
147 Ga0373937_1038251 3300036401 Unclassified 768
148 Ga0316582_0051971 3300036647 Bacteria 2603
149 Ga0316582_0143655 3300036647 Bacteria 1610
150 Ga0316584_0555438 3300036712 Bacteria 801
151 Ga0316584_0747227 3300036712 Unclassified 667
152 Ga0400489_23392 3300039093 Bacteria 1450
153 Ga0400489_27073 3300039093 Bacteria 1567
154 Ga0436365_0887223 3300039437 Bacteria 8871
155 Ga0436361_0712647 3300039447 Unclassified 816
156 Ga0451791_1454916 3300041451 Bacteria 1484
157 Ga0451793_1157142 3300041452 Bacteria 2849
158 Ga0451793_1890922 3300041452 Unclassified 878
159 Ga0451797_1368420 3300041453 Bacteria 5639
160 Ga0451797_1470944 3300041453 Unclassified 692
161 Ga0451797_1499519 3300041453 Bacteria 612
162 Ga0451795_0198865 3300041456 Bacteria 825
163 Ga0451798_0108263 3300041458 Bacteria 709
164 Ga0451802_1162443 3300041460 Unclassified 1135
165 Ga0451807_0570628 3300041486 Bacteria 1368
166 Ga0451807_0687975 3300041486 Bacteria 2825
167 Ga0451839_1028884 3300041496 Bacteria 1098
168 Ga0451849_0536779 3300041505 Unclassified 844
169 Ga0451849_0750554 3300041505 Bacteria 7418
170 Ga0451843_0422726 3300041509 Bacteria 1243
171 Ga0439445_0223677 3300042004 Unclassified 559
172 Ga0451577_0134954 3300042876 Bacteria 2216
173 Ga0453683_0021961 3300044673 Unclassified 4072
174 Ga0453683_0341968 3300044673 Bacteria 960
175 Ga0453683_0448649 3300044673 Bacteria 834
176 Ga0453684_0933003 3300044712 Bacteria 927
177 Ga0466957_0313346 3300044842 Unclassified 1057
178 Ga0466960_0525845 3300044901 Bacteria 695
179 Ga0451576_0027684 3300045051 Bacteria 6085
180 Ga0451576_0963722 3300045051 Bacteria 894
181 Ga0495640_0735729 3300046533 Unclassified 590
182 Ga0495581_0870000 3300047315 Bacteria 515
183 Ga0496104_0678611 3300048907 Unclassified 938
184 Ga0496105_0807731 3300048908 Bacteria 713
185 Ga0496112_0430570 3300048915 Bacteria 1258
186 Ga0496114_0109827 3300048917 Unclassified 2362
187 Ga0501306_067961 3300049127 Unclassified 597
188 Ga0501068_0084603 3300049584 Bacteria 1951
189 Ga0501071_0022578 3300049587 Bacteria 4387
190 Ga0501071_0491338 3300049587 Unclassified 941
191 Ga0501073_0104515 3300049589 Bacteria 1965
192 Ga0501074_0694074 3300049590 Bacteria 718
193 Ga0501076_0332403 3300049592 Bacteria 1247
194 Ga0501080_0375274 3300049742 Bacteria 1282
195 Ga0501035_0678562 3300049822 Bacteria 833
196 nmdc:mga03683_394465_c1 3300050489 Unclassified 660
197 nmdc:mga0k408_11641_c1 3300050493 Bacteria 4794
198 nmdc:mga0k408_173299_c1 3300050493 Unclassified 1286
199 nmdc:mga0k408_77620_c1 3300050493 Bacteria 1942
200 nmdc:mga08y16_23290_c1 3300050511 Bacteria 6540
201 nmdc:mga08y16_5401_c1 3300050511 Bacteria 13363
202 nmdc:mga0rr50_28335_c1 3300050513 Bacteria 3936
203 Ga0495595_0106154 3300053084 Bacteria 1359
204 Ga0501084_0018272 3300054114 Bacteria 5839
205 Ga0587062_014393 3300059639 Bacteria 1043
206 Ga0466962_0313550 3300061719 Bacteria 777
207 Ga0105245_10062882
208 rootH2_10010790
209 rootH2_10050987
210 rootH2_10089208
211 rootH2_10224370
212 rootL2_10135840
213 rootL2_10206242
214 rootL2_10273159
215 rootH1_10018189
216 rootH1_10165149
217 rootH1_10165150
218 rootH1_10314655
219 Ga0070683_100125036
220 Ga0070683_101565798
221 Ga0070677_10095270
222 Ga0070682_100001483
223 Ga0070682_100001977
224 Ga0070682_100240807
225 Ga0068868_100023539
226 Ga0070689_100014022
227 Ga0070673_100811797
228 Ga0070688_100231121
229 Ga0070688_100243583
230 Ga0070688_100676615
231 Ga0070700_101451851
232 Ga0070694_100210962
233 Ga0070678_100065850
234 Ga0068867_100005823
235 Ga0070685_10120100
236 Ga0070698_100788024
237 Ga0070684_100284933
238 Ga0070684_100609635
239 Ga0070684_100865860
240 Ga0070672_100000141
241 Ga0070672_100161767
242 Ga0070695_100334752
243 Ga0070693_101098595
244 Ga0070704_100127657
245 Ga0068855_100000039
246 Ga0068855_100240862
247 Ga0068855_101183017
248 Ga0068856_100083572
249 Ga0068856_100550883
250 Ga0068859_100021142
251 Ga0068859_101934642
252 Ga0068864_100293493
253 Ga0068864_100334673
254 Ga0068870_10119147
255 Ga0068863_100810269
256 Ga0068858_100573718
257 Ga0075366_10023718
258 Ga0075366_10225215
259 Ga0075366_10305330
260 Ga0075366_10602004
261 Ga0068871_100112255
262 Ga0068865_101195200
263 Ga0097620_100021142
264 Ga0097620_101934306
265 Ga0075435_100006482
266 Ga0111539_10008691
267 Ga0111539_10030165
268 Ga0111539_10545514
269 Ga0111539_11659296
270 Ga0105245_10032843
271 Ga0105247_10007106
272 Ga0114129_10439741
273 Ga0105241_10009488
274 Ga0105242_10226401
275 Ga0105242_10522109
276 Ga0105239_10331730
277 Ga0157374_10193537
278 Ga0157376_10012467
279 Ga0207682_10083782
280 Ga0207642_10038369
281 Ga0207710_10004699
282 Ga0207687_10002044
283 Ga0207687_10048360
284 Ga0207686_10242781
285 Ga0207686_11002245
286 Ga0207670_10027310
287 Ga0207704_10422043
288 Ga0207704_10566653
289 Ga0207691_10003213
290 Ga0207661_10057825
291 Ga0207661_10572528
292 Ga0207667_10000085
293 Ga0207667_10174253
294 Ga0207667_10737045
295 Ga0207677_10004608
296 Ga0207702_10072455
297 Ga0207702_10472838
298 Ga0207641_10247891
299 Ga0207641_10620611
300 Ga0207676_10417402
301 Ga0207683_10083497
302 Ga0207428_10055719
303 Ga0265319_1000063
304 Ga0265318_10000294
305 Ga0265318_10001851
306 Ga0265338_10114151
307 Ga0265760_10091156
308 Ga0265330_10000111
309 Ga0265330_10029787
310 Ga0265332_10000221
311 Ga0265328_10007037
312 Ga0265328_10123240
313 Ga0265328_10200352
314 Ga0265320_10000196
315 Ga0265320_10106629
316 Ga0265325_10000958
317 Ga0265329_10000156
318 Ga0265340_10001464
319 Ga0265340_10002529
320 Ga0265340_10005275
321 Ga0265339_10001735
322 Ga0265339_10010484
323 Ga0265331_10001500
324 Ga0265331_10030236
325 Ga0265331_10095005
326 Ga0265316_10000482
327 Ga0265316_10001042
328 Ga0265316_10042643
329 Ga0265316_10135672
330 Ga0307513_10495974
331 Ga0307513_10546793
332 Ga0265313_10000189
333 Ga0265313_10001115
334 Ga0307508_10001013
335 Ga0307514_10264438
336 Ga0316579_10015323
337 Ga0265314_10000001
338 Ga0265314_10000379
339 Ga0265314_10594873
340 Ga0265342_10000313
341 Ga0265342_10129750
342 Ga0316576_10062833
343 Ga0316576_10105232
344 Ga0316578_10003337
345 Ga0307516_10094575
346 Ga0307507_10056734
347 Ga0307510_10322635
348 Ga0373944_0336602
349 Ga0373956_0099494
350 Ga0373956_0375312
351 Ga0373935_0997507
352 Ga0373933_0005425
353 Ga0373937_1038251
354 Ga0316582_0051971
355 Ga0316582_0143655
356 Ga0316584_0555438
357 Ga0316584_0747227
358 Ga0400489_23392
359 Ga0400489_27073
360 Ga0436365_0887223
361 Ga0436361_0712647
362 Ga0451791_1454916
363 Ga0451793_1157142
364 Ga0451793_1890922
365 Ga0451797_1368420
366 Ga0451797_1470944
367 Ga0451797_1499519
368 Ga0451795_0198865
369 Ga0451798_0108263
370 Ga0451802_1162443
371 Ga0451807_0570628
372 Ga0451807_0687975
373 Ga0451839_1028884
374 Ga0451849_0536779
375 Ga0451849_0750554
376 Ga0451843_0422726
377 Ga0439445_0223677
378 Ga0451577_0134954
379 Ga0453683_0021961
380 Ga0453683_0341968
381 Ga0453683_0448649
382 Ga0453684_0933003
383 Ga0466957_0313346
384 Ga0466960_0525845
385 Ga0451576_0027684
386 Ga0451576_0963722
387 Ga0495640_0735729
388 Ga0495581_0870000
389 Ga0496104_0678611
390 Ga0496105_0807731
391 Ga0496112_0430570
392 Ga0496114_0109827
393 Ga0501306_067961
394 Ga0501068_0084603
395 Ga0501071_0022578
396 Ga0501071_0491338
397 Ga0501073_0104515
398 Ga0501074_0694074
399 Ga0501076_0332403
400 Ga0501080_0375274
401 Ga0501035_0678562
402 nmdc:mga03683_394465_c1
403 nmdc:mga0k408_11641_c1
404 nmdc:mga0k408_173299_c1
405 nmdc:mga0k408_77620_c1
406 nmdc:mga08y16_23290_c1
407 nmdc:mga08y16_5401_c1
408 nmdc:mga0rr50_28335_c1
409 Ga0495595_0106154
410 Ga0501084_0018272
411 Ga0587062_014393
412 Ga0466962_0313550

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00359

PTS_EIIA_2

Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2

27

160

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2a0j-assembly1.cif.gz_A crystal structure of nitrogen regulatory protein iia-ntr from neisseria meningitidis 0.9401 5 148
3urr-assembly1.cif.gz_B structure of pts iia-like nitrogen-regulatory protein ptsn (bth_i0484) (ptsn) 0.9356 1 148
3urr-assembly1.cif.gz_A structure of pts iia-like nitrogen-regulatory protein ptsn (bth_i0484) (ptsn) 0.9349 1 148
4gqx-assembly1.cif.gz_B crystal structure of eiia(ntr) from burkholderia pseudomallei 0.9292 2 148
1a6j-assembly1.cif.gz_B-2 nitrogen regulatory bacterial protein iia-nitrogen 0.9231 6 148
ID Description Score Start End Superfamily
af_P69829_1_163_3.40.930.10 Alpha Beta;3-Layer(aba) Sandwich;Mannitol-specific EII; Chain A;Mannitol-specific EII; Chain A 0.9505 3 148 3.40.930.10
3urrA00 Alpha Beta;3-Layer(aba) Sandwich;Mannitol-specific EII; Chain A;Mannitol-specific EII; Chain A 0.9348 1 148 3.40.930.10
af_Q2FUX0_504_650_3.40.930.10 Alpha Beta;3-Layer(aba) Sandwich;Mannitol-specific EII; Chain A;Mannitol-specific EII; Chain A 0.9248 6 148 3.40.930.10
af_Q55DW9_792_1042_1.10.555.10 Mainly Alpha;Orthogonal Bundle;Phosphatidylinositol 3-kinase; Chain A;Rho GTPase activation protein 0.9228 28 54 1.10.555.10
af_Q2G239_1_154_3.40.930.10 Alpha Beta;3-Layer(aba) Sandwich;Mannitol-specific EII; Chain A;Mannitol-specific EII; Chain A 0.9084 1 156 3.40.930.10
ID Description Score Start End GO Terms
AF-A0A2I1DQU4-F1-model_v4 PTS sugar transporter 0.9696 8 148 GO:0030295
AF-A0A1V5XQT0-F1-model_v4 PTS system fructose-specific EIIABC component 0.9651 1 156 GO:0030295
AF-A0A7C4SX52-F1-model_v4 PTS sugar transporter subunit IIA 0.9634 1 153 GO:0030295
AF-A0A4Q3IYX6-F1-model_v4 deleted 0.9598 1 152
AF-A0A0Q8MV54-F1-model_v4 PTS EIIA type-2 domain-containing protein 0.9597 1 148 GO:0030295

Map