F314830
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 206 | 129 | 197 | 312 |
Family's Representative Sequence
| Representative Sequence | 3300005467|Ga0070706_100135084|Ga0070706_1001350843 |
| Length | 367 |
| Sequence | MGEQIILVRTATGYQSGTVAALCSPRGNREAYFPLSSVAADVIRLGVKMTQNMMRAVQFHTYGGPEQLIVERVPRPEPQAGEVLVRVYAAGVNPIDWKVRKGLFKDVMPLFLPYTPGNEFAGTIELLGAGVTTFQQGQAVYGRGGRGTYAEYAIAAADSLMQMPRTISFDQAASVPVGARTAWIALFILADLQAGQRVLIHGAAGGVGNYAVQLARWKGAHVIGTASQDNLEFVRSLGAETVIDYHATPFEHVVHEVDVVVDPVGGEAQDRSWPLIKPGGMLVAIGHPPVEDTARRYGVRTLSTVANQRAPLRISTEPLEAISSLLESGMLLPQPGKVFPLEEAGQAQAFSETGHGRGRIILRVVAE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2551306519 | Bacillus sp. WBUNB004 | Isolate | Rhizosphere |
| 2 | 2684622632 | Bacillus cereus 905 | Isolate | Unclassified |
| 3 | 2886627955 | Nostoc sp. PA-18-2419 JC1668 | Isolate | Unclassified |
| 4 | 2929233124 | Bacillus sp. R-74298 Hybrid assembly | Isolate | Unclassified |
| 5 | 2965761152 | Bacillus sp. COPE52 | Isolate | Unclassified |
| 6 | 2990265787 | Sphingomonas sp. SORGH_AS802 | Isolate | Aerial Root |
| 7 | 2993693658 | Sphingomonas sp. SORGH_AS438 | Isolate | Aerial Root |
| 8 | 2998344455 | Vogesella urethralis SLBN-145 | Isolate | Rhizosphere |
| 9 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 10 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 13 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 19 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 21 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 22 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 24 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 25 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 26 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 28 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 30 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 31 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 32 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 33 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 34 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 35 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 36 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 37 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 38 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 39 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 40 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 41 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 42 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 43 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 44 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 93 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 94 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 95 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 96 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 97 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 98 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 99 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 100 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 101 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 102 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 103 | 3300038705 | Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 | Metagenome | Unclassified |
| 104 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 105 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 106 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 107 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 108 | 3300046458 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046537 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 117 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 118 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 119 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 120 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 121 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 122 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 123 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 124 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 125 | 3300053118 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere | Metagenome | Endosphere |
| 126 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 127 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 128 | 3300053155 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere | Metagenome | Endosphere |
| 129 | 8022621104 | Bacillus sp. PIC28 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.63 |
| Metatranscriptomes | 0 |
| Isolates | 4.37 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.97 |
| Bulb | 0 |
| Endosphere | 3.4 |
| Nodule | 0 |
| Rhizoplane | 0.97 |
| Rhizosphere | 85.44 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 9.22 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0065704_10099901 | 3300005289 | Unclassified | 2293 |
| 2 | Ga0070658_10074022 | 3300005327 | Bacteria | 2794 |
| 3 | Ga0070666_10133611 | 3300005335 | Bacteria | 1725 |
| 4 | Ga0068868_100028265 | 3300005338 | Bacteria | 4286 |
| 5 | Ga0068868_100174513 | 3300005338 | Bacteria | 1781 |
| 6 | Ga0068868_100196656 | 3300005338 | Bacteria | 1679 |
| 7 | Ga0070660_100001558 | 3300005339 | Bacteria | 15760 |
| 8 | Ga0070661_100070980 | 3300005344 | Bacteria | 2562 |
| 9 | Ga0070668_100107581 | 3300005347 | Bacteria | 2217 |
| 10 | Ga0070709_10095207 | 3300005434 | Unclassified | 1972 |
| 11 | Ga0070708_100096015 | 3300005445 | Bacteria | 2707 |
| 12 | Ga0070708_100110819 | 3300005445 | Bacteria | 2522 |
| 13 | Ga0070708_100169712 | 3300005445 | Bacteria | 2036 |
| 14 | Ga0070685_10004153 | 3300005466 | Bacteria | 7310 |
| 15 | Ga0070706_100006114 | 3300005467 | Bacteria | 11387 |
| 16 | Ga0070706_100046944 | 3300005467 | Bacteria | 3985 |
| 17 | Ga0070706_100135084 | 3300005467 | Bacteria | 2302 |
| 18 | Ga0070706_100180912 | 3300005467 | Bacteria | 1968 |
| 19 | Ga0070706_100187667 | 3300005467 | Bacteria | 1932 |
| 20 | Ga0070707_100003495 | 3300005468 | Bacteria | 14826 |
| 21 | Ga0070707_100174754 | 3300005468 | Bacteria | 2093 |
| 22 | Ga0070698_100038588 | 3300005471 | Unclassified | 4921 |
| 23 | Ga0070698_100185484 | 3300005471 | Bacteria | 2018 |
| 24 | Ga0070698_100196242 | 3300005471 | Unclassified | 1955 |
| 25 | Ga0070699_100176502 | 3300005518 | Unclassified | 1895 |
| 26 | Ga0070684_100285000 | 3300005535 | Unclassified | 1514 |
| 27 | Ga0070697_100111791 | 3300005536 | Bacteria | 2277 |
| 28 | Ga0068853_100004002 | 3300005539 | Bacteria | 11333 |
| 29 | Ga0070672_100074844 | 3300005543 | Bacteria | 2702 |
| 30 | Ga0070686_100083699 | 3300005544 | Bacteria | 2118 |
| 31 | Ga0070665_100004754 | 3300005548 | Bacteria | 14140 |
| 32 | Ga0068855_100000930 | 3300005563 | Bacteria | 36451 |
| 33 | Ga0068855_100017747 | 3300005563 | Bacteria | 8555 |
| 34 | Ga0068855_100085166 | 3300005563 | Bacteria | 3658 |
| 35 | Ga0068855_100085213 | 3300005563 | Bacteria | 3657 |
| 36 | Ga0068855_100271235 | 3300005563 | Bacteria | 1887 |
| 37 | Ga0068855_100364011 | 3300005563 | Bacteria | 1591 |
| 38 | Ga0068857_100001777 | 3300005577 | Bacteria | 17338 |
| 39 | Ga0068857_100006790 | 3300005577 | Bacteria | 9852 |
| 40 | Ga0068857_100192079 | 3300005577 | Bacteria | 1860 |
| 41 | Ga0068854_100014832 | 3300005578 | Bacteria | 5145 |
| 42 | Ga0068856_100062850 | 3300005614 | Bacteria | 3668 |
| 43 | Ga0068856_100118241 | 3300005614 | Bacteria | 2651 |
| 44 | Ga0068856_100152762 | 3300005614 | Bacteria | 2318 |
| 45 | Ga0068856_100298113 | 3300005614 | Bacteria | 1629 |
| 46 | Ga0068852_100001807 | 3300005616 | Bacteria | 14531 |
| 47 | Ga0068852_100004026 | 3300005616 | Bacteria | 10336 |
| 48 | Ga0068859_100011901 | 3300005617 | Bacteria | 8742 |
| 49 | Ga0068864_100117106 | 3300005618 | Bacteria | 2378 |
| 50 | Ga0068861_100039447 | 3300005719 | Bacteria | 3524 |
| 51 | Ga0068851_10000033 | 3300005834 | Bacteria | 108511 |
| 52 | Ga0068858_100000422 | 3300005842 | Bacteria | 44076 |
| 53 | Ga0068858_100348766 | 3300005842 | Bacteria | 1418 |
| 54 | Ga0068860_100002373 | 3300005843 | Bacteria | 19780 |
| 55 | Ga0068860_100288108 | 3300005843 | Bacteria | 1606 |
| 56 | Ga0068862_100020139 | 3300005844 | Bacteria | 5571 |
| 57 | Ga0081540_1029363 | 3300005983 | Bacteria | 3065 |
| 58 | Ga0070717_10001729 | 3300006028 | Bacteria | 15238 |
| 59 | Ga0075433_10078644 | 3300006852 | Bacteria | 2906 |
| 60 | Ga0097620_100011901 | 3300006931 | Bacteria | 8742 |
| 61 | Ga0105240_10004370 | 3300009093 | Bacteria | 21580 |
| 62 | Ga0105240_10221598 | 3300009093 | Bacteria | 2203 |
| 63 | Ga0105240_10451107 | 3300009093 | Bacteria | 1439 |
| 64 | Ga0105245_10014955 | 3300009098 | Bacteria | 6761 |
| 65 | Ga0105245_10134190 | 3300009098 | Bacteria | 2325 |
| 66 | Ga0105241_10000410 | 3300009174 | Bacteria | 32447 |
| 67 | Ga0105248_10000340 | 3300009177 | Bacteria | 55043 |
| 68 | Ga0105248_10010211 | 3300009177 | Bacteria | 10338 |
| 69 | Ga0105237_10000673 | 3300009545 | Bacteria | 47236 |
| 70 | Ga0105237_10035595 | 3300009545 | Bacteria | 5038 |
| 71 | Ga0105237_10208898 | 3300009545 | Bacteria | 1952 |
| 72 | Ga0105237_10246299 | 3300009545 | Bacteria | 1789 |
| 73 | Ga0105237_10418430 | 3300009545 | Bacteria | 1345 |
| 74 | Ga0105238_10000376 | 3300009551 | Bacteria | 47943 |
| 75 | Ga0105238_10002038 | 3300009551 | Bacteria | 20395 |
| 76 | Ga0105238_10007886 | 3300009551 | Bacteria | 10652 |
| 77 | Ga0105238_10029086 | 3300009551 | Bacteria | 5629 |
| 78 | Ga0105239_10012670 | 3300010375 | Bacteria | 9381 |
| 79 | Ga0105239_10062501 | 3300010375 | Bacteria | 4087 |
| 80 | Ga0157370_10085188 | 3300013104 | Unclassified | 2969 |
| 81 | Ga0157369_10008774 | 3300013105 | Bacteria | 11584 |
| 82 | Ga0157374_10048665 | 3300013296 | Bacteria | 3934 |
| 83 | Ga0157374_10199289 | 3300013296 | Unclassified | 1960 |
| 84 | Ga0157372_10011751 | 3300013307 | Bacteria | 9325 |
| 85 | Ga0157372_10423187 | 3300013307 | Bacteria | 1552 |
| 86 | Ga0157375_10237192 | 3300013308 | Unclassified | 1983 |
| 87 | Ga0157379_10004929 | 3300014968 | Bacteria | 11458 |
| 88 | Ga0209148_1000601 | 3300025254 | Bacteria | 32421 |
| 89 | Ga0207656_10000001 | 3300025321 | Bacteria | 1323684 |
| 90 | Ga0207653_10019522 | 3300025885 | Bacteria | 2137 |
| 91 | Ga0207710_10036919 | 3300025900 | Bacteria | 2156 |
| 92 | Ga0207680_10115312 | 3300025903 | Bacteria | 1749 |
| 93 | Ga0207680_10384684 | 3300025903 | Bacteria | 990 |
| 94 | Ga0207647_10021069 | 3300025904 | Bacteria | 4357 |
| 95 | Ga0207699_10124409 | 3300025906 | Bacteria | 1672 |
| 96 | Ga0207705_10035327 | 3300025909 | Bacteria | 3576 |
| 97 | Ga0207705_10048997 | 3300025909 | Bacteria | 3040 |
| 98 | Ga0207684_10000857 | 3300025910 | Bacteria | 34915 |
| 99 | Ga0207684_10004134 | 3300025910 | Bacteria | 13820 |
| 100 | Ga0207684_10039740 | 3300025910 | Bacteria | 3989 |
| 101 | Ga0207684_10052328 | 3300025910 | Bacteria | 3466 |
| 102 | Ga0207684_10080270 | 3300025910 | Bacteria | 2775 |
| 103 | Ga0207684_10139436 | 3300025910 | Bacteria | 2084 |
| 104 | Ga0207684_10142012 | 3300025910 | Bacteria | 2064 |
| 105 | Ga0207654_10000001 | 3300025911 | Bacteria | 1816198 |
| 106 | Ga0207695_10002392 | 3300025913 | Bacteria | 27815 |
| 107 | Ga0207695_10005943 | 3300025913 | Bacteria | 15976 |
| 108 | Ga0207695_10162008 | 3300025913 | Bacteria | 2168 |
| 109 | Ga0207671_10000001 | 3300025914 | Bacteria | 1318881 |
| 110 | Ga0207671_10020955 | 3300025914 | Bacteria | 4969 |
| 111 | Ga0207671_10124695 | 3300025914 | Bacteria | 1971 |
| 112 | Ga0207663_10237588 | 3300025916 | Bacteria | 1335 |
| 113 | Ga0207657_10076120 | 3300025919 | Bacteria | 2832 |
| 114 | Ga0207646_10007201 | 3300025922 | Bacteria | 11353 |
| 115 | Ga0207646_10008303 | 3300025922 | Bacteria | 10421 |
| 116 | Ga0207646_10014866 | 3300025922 | Bacteria | 7373 |
| 117 | Ga0207646_10252327 | 3300025922 | Bacteria | 1594 |
| 118 | Ga0207694_10000019 | 3300025924 | Bacteria | 312382 |
| 119 | Ga0207694_10006978 | 3300025924 | Bacteria | 8574 |
| 120 | Ga0207694_10009169 | 3300025924 | Bacteria | 7466 |
| 121 | Ga0207694_10019938 | 3300025924 | Bacteria | 5073 |
| 122 | Ga0207687_10008333 | 3300025927 | Bacteria | 6784 |
| 123 | Ga0207691_10131154 | 3300025940 | Bacteria | 2214 |
| 124 | Ga0207711_10050271 | 3300025941 | Bacteria | 3568 |
| 125 | Ga0207661_10055081 | 3300025944 | Bacteria | 3188 |
| 126 | Ga0207667_10000837 | 3300025949 | Bacteria | 39713 |
| 127 | Ga0207667_10007244 | 3300025949 | Bacteria | 13382 |
| 128 | Ga0207667_10010973 | 3300025949 | Bacteria | 10559 |
| 129 | Ga0207667_10011845 | 3300025949 | Bacteria | 10101 |
| 130 | Ga0207667_10042852 | 3300025949 | Bacteria | 4807 |
| 131 | Ga0207667_10068756 | 3300025949 | Bacteria | 3687 |
| 132 | Ga0207667_10135339 | 3300025949 | Bacteria | 2537 |
| 133 | Ga0207668_10144954 | 3300025972 | Bacteria | 1831 |
| 134 | Ga0207677_10190725 | 3300026023 | Bacteria | 1621 |
| 135 | Ga0207703_10000369 | 3300026035 | Bacteria | 48026 |
| 136 | Ga0207639_10001902 | 3300026041 | Bacteria | 14007 |
| 137 | Ga0207639_10050690 | 3300026041 | Bacteria | 3153 |
| 138 | Ga0207639_10118152 | 3300026041 | Bacteria | 2174 |
| 139 | Ga0207702_10046323 | 3300026078 | Bacteria | 3660 |
| 140 | Ga0207702_10089371 | 3300026078 | Bacteria | 2694 |
| 141 | Ga0207702_10095186 | 3300026078 | Bacteria | 2616 |
| 142 | Ga0207702_10127073 | 3300026078 | Bacteria | 2290 |
| 143 | Ga0207641_10237000 | 3300026088 | Bacteria | 1698 |
| 144 | Ga0207676_10266841 | 3300026095 | Bacteria | 1548 |
| 145 | Ga0207674_10001465 | 3300026116 | Bacteria | 30502 |
| 146 | Ga0207674_10012325 | 3300026116 | Bacteria | 9559 |
| 147 | Ga0207674_10149133 | 3300026116 | Bacteria | 2296 |
| 148 | Ga0207675_100064370 | 3300026118 | Bacteria | 3427 |
| 149 | Ga0207698_10000599 | 3300026142 | Bacteria | 21106 |
| 150 | Ga0207698_10003284 | 3300026142 | Bacteria | 9719 |
| 151 | Ga0207698_10015562 | 3300026142 | Bacteria | 5097 |
| 152 | Ga0207698_10414777 | 3300026142 | Bacteria | 1290 |
| 153 | Ga0268266_10006672 | 3300028379 | Bacteria | 10532 |
| 154 | Ga0268265_10013002 | 3300028380 | Bacteria | 5653 |
| 155 | Ga0268264_10003211 | 3300028381 | Bacteria | 14163 |
| 156 | Ga0268264_10261995 | 3300028381 | Bacteria | 1611 |
| 157 | Ga0307515_10000114 | 3300028794 | Bacteria | 194024 |
| 158 | Ga0307515_10219756 | 3300028794 | Bacteria | 1721 |
| 159 | Ga0307508_10015107 | 3300031616 | Bacteria | 7038 |
| 160 | Ga0307514_10047708 | 3300031649 | Unclassified | 3342 |
| 161 | Ga0316575_10050496 | 3300031665 | Unclassified | 1656 |
| 162 | Ga0316579_10006685 | 3300031691 | Bacteria | 4717 |
| 163 | Ga0307516_10059870 | 3300031730 | Bacteria | 3702 |
| 164 | Ga0316585_10068197 | 3300032137 | Unclassified | 1153 |
| 165 | Ga0316574_0012751 | 3300035398 | Bacteria | 4817 |
| 166 | Ga0373937_0276275 | 3300036401 | Bacteria | 1586 |
| 167 | Ga0316584_0010300 | 3300036712 | Bacteria | 6531 |
| 168 | Ga0395901_0404222 | 3300038443 | Bacteria | 1403 |
| 169 | Ga0237819_00227 | 3300038705 | Bacteria | 20510 |
| 170 | Ga0436365_0733224 | 3300039437 | Bacteria | 3716 |
| 171 | Ga0436365_1415673 | 3300039437 | Bacteria | 1207 |
| 172 | Ga0453684_0092521 | 3300044712 | Unclassified | 3727 |
| 173 | Ga0466959_0014866 | 3300045049 | Bacteria | 5667 |
| 174 | Ga0466967_0001129 | 3300045976 | Bacteria | 14857 |
| 175 | Ga0495591_013684 | 3300046458 | Bacteria | 2953 |
| 176 | Ga0495639_0167048 | 3300046475 | Unclassified | 1067 |
| 177 | Ga0495598_0005827 | 3300046537 | Bacteria | 2753 |
| 178 | Ga0495621_0000290 | 3300046539 | Bacteria | 12108 |
| 179 | Ga0495656_0026212 | 3300046615 | Bacteria | 2319 |
| 180 | Ga0495668_0003452 | 3300046616 | Bacteria | 11823 |
| 181 | Ga0495647_0003356 | 3300046681 | Bacteria | 5129 |
| 182 | Ga0495681_0015573 | 3300047470 | Bacteria | 4295 |
| 183 | Ga0496108_0039164 | 3300048911 | Bacteria | 3952 |
| 184 | Ga0496110_0159041 | 3300048913 | Bacteria | 2047 |
| 185 | Ga0496117_0033850 | 3300048920 | Bacteria | 3859 |
| 186 | Ga0496118_0032003 | 3300048921 | Bacteria | 4345 |
| 187 | Ga0496119_0001055 | 3300048922 | Bacteria | 35142 |
| 188 | Ga0496120_0000600 | 3300048923 | Bacteria | 54546 |
| 189 | Ga0496120_0013502 | 3300048923 | Bacteria | 5497 |
| 190 | Ga0496126_0047588 | 3300048929 | Bacteria | 3926 |
| 191 | Ga0496126_0324187 | 3300048929 | Bacteria | 1265 |
| 192 | Ga0500635_0018240 | 3300053080 | Bacteria | 2115 |
| 193 | Ga0500651_0013326 | 3300053093 | Bacteria | 5008 |
| 194 | Ga0500594_0017465 | 3300053118 | Bacteria | 1758 |
| 195 | Ga0500568_0009627 | 3300053139 | Bacteria | 4578 |
| 196 | Ga0500573_0111424 | 3300053140 | Bacteria | 1531 |
| 197 | Ga0500620_000443 | 3300053155 | Bacteria | 7520 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005563 | Ga0068855_100271235 | Ga0068855_1002712352 | 271 |
| 2 | 3300009545 | Ga0105237_10035595 | Ga0105237_100355954 | 271 |
| 3 | 3300025927 | Ga0207687_10008333 | Ga0207687_100083334 | 271 |
| 4 | 3300009098 | Ga0105245_10014955 | Ga0105245_100149552 | 274 |
| 5 | 3300053093 | Ga0500651_0013326 | Ga0500651_0013326_703_1596 | 275 |
| 6 | 3300053140 | Ga0500573_0111424 | Ga0500573_0111424_502_1395 | 275 |
| 7 | 3300005466 | Ga0070685_10004153 | Ga0070685_100041532 | 277 |
| 8 | 3300014968 | Ga0157379_10004929 | Ga0157379_100049299 | 277 |
| 9 | 3300053155 | Ga0500620_000443 | Ga0500620_000443_2970_3863 | 278 |
| 10 | 3300048923 | Ga0496120_0013502 | Ga0496120_0013502_2229_3107 | 287 |
| 11 | 3300025914 | Ga0207671_10020955 | Ga0207671_100209554 | 288 |
| 12 | 3300009551 | Ga0105238_10000376 | Ga0105238_100003765 | 290 |
| 13 | 3300025924 | Ga0207694_10000019 | Ga0207694_10000019197 | 290 |
| 14 | 3300005327 | Ga0070658_10074022 | Ga0070658_100740222 | 291 |
| 15 | 3300005577 | Ga0068857_100001777 | Ga0068857_10000177715 | 291 |
| 16 | 3300005614 | Ga0068856_100298113 | Ga0068856_1002981132 | 291 |
| 17 | 3300005616 | Ga0068852_100004026 | Ga0068852_1000040268 | 291 |
| 18 | 3300005834 | Ga0068851_10000033 | Ga0068851_1000003357 | 291 |
| 19 | 3300009093 | Ga0105240_10451107 | Ga0105240_104511071 | 291 |
| 20 | 3300009545 | Ga0105237_10000673 | Ga0105237_1000067315 | 291 |
| 21 | 3300009551 | Ga0105238_10002038 | Ga0105238_100020385 | 291 |
| 22 | 3300010375 | Ga0105239_10062501 | Ga0105239_100625014 | 291 |
| 23 | 3300025321 | Ga0207656_10000001 | Ga0207656_100000011268 | 291 |
| 24 | 3300025909 | Ga0207705_10035327 | Ga0207705_100353272 | 291 |
| 25 | 3300025914 | Ga0207671_10000001 | Ga0207671_100000011267 | 291 |
| 26 | 3300025924 | Ga0207694_10009169 | Ga0207694_100091695 | 291 |
| 27 | 3300026041 | Ga0207639_10118152 | Ga0207639_101181521 | 291 |
| 28 | 3300026078 | Ga0207702_10095186 | Ga0207702_100951863 | 291 |
| 29 | 3300026116 | Ga0207674_10001465 | Ga0207674_100014653 | 291 |
| 30 | 3300026142 | Ga0207698_10000599 | Ga0207698_100005992 | 291 |
| 31 | 3300026142 | Ga0207698_10003284 | Ga0207698_1000328411 | 291 |
| 32 | 3300048929 | Ga0496126_0047588 | Ga0496126_0047588_2244_3134 | 291 |
| 33 | 3300005335 | Ga0070666_10133611 | Ga0070666_101336111 | 292 |
| 34 | 3300005338 | Ga0068868_100028265 | Ga0068868_1000282655 | 292 |
| 35 | 3300005338 | Ga0068868_100196656 | Ga0068868_1001966562 | 292 |
| 36 | 3300005344 | Ga0070661_100070980 | Ga0070661_1000709802 | 292 |
| 37 | 3300005543 | Ga0070672_100074844 | Ga0070672_1000748444 | 292 |
| 38 | 3300005563 | Ga0068855_100000930 | Ga0068855_10000093015 | 292 |
| 39 | 3300005563 | Ga0068855_100364011 | Ga0068855_1003640112 | 292 |
| 40 | 3300005578 | Ga0068854_100014832 | Ga0068854_1000148325 | 292 |
| 41 | 3300005614 | Ga0068856_100118241 | Ga0068856_1001182411 | 292 |
| 42 | 3300005842 | Ga0068858_100000422 | Ga0068858_10000042212 | 292 |
| 43 | 3300009098 | Ga0105245_10134190 | Ga0105245_101341902 | 292 |
| 44 | 3300009177 | Ga0105248_10000340 | Ga0105248_1000034025 | 292 |
| 45 | 3300009177 | Ga0105248_10010211 | Ga0105248_100102118 | 292 |
| 46 | 3300009545 | Ga0105237_10208898 | Ga0105237_102088982 | 292 |
| 47 | 3300013296 | Ga0157374_10048665 | Ga0157374_100486653 | 292 |
| 48 | 3300025900 | Ga0207710_10036919 | Ga0207710_100369192 | 292 |
| 49 | 3300025903 | Ga0207680_10115312 | Ga0207680_101153122 | 292 |
| 50 | 3300025909 | Ga0207705_10048997 | Ga0207705_100489974 | 292 |
| 51 | 3300025913 | Ga0207695_10005943 | Ga0207695_1000594311 | 292 |
| 52 | 3300025914 | Ga0207671_10124695 | Ga0207671_101246952 | 292 |
| 53 | 3300025919 | Ga0207657_10076120 | Ga0207657_100761204 | 292 |
| 54 | 3300025940 | Ga0207691_10131154 | Ga0207691_101311542 | 292 |
| 55 | 3300025941 | Ga0207711_10050271 | Ga0207711_100502713 | 292 |
| 56 | 3300025949 | Ga0207667_10000837 | Ga0207667_1000083723 | 292 |
| 57 | 3300025949 | Ga0207667_10011845 | Ga0207667_1001184511 | 292 |
| 58 | 3300025949 | Ga0207667_10042852 | Ga0207667_100428522 | 292 |
| 59 | 3300026023 | Ga0207677_10190725 | Ga0207677_101907252 | 292 |
| 60 | 3300026035 | Ga0207703_10000369 | Ga0207703_1000036912 | 292 |
| 61 | 3300026041 | Ga0207639_10050690 | Ga0207639_100506901 | 292 |
| 62 | 3300026078 | Ga0207702_10046323 | Ga0207702_100463233 | 292 |
| 63 | 3300026088 | Ga0207641_10237000 | Ga0207641_102370002 | 292 |
| 64 | 3300026095 | Ga0207676_10266841 | Ga0207676_102668412 | 292 |
| 65 | 3300026142 | Ga0207698_10414777 | Ga0207698_104147772 | 292 |
| 66 | 3300048911 | Ga0496108_0039164 | Ga0496108_0039164_2524_3420 | 292 |
| 67 | 3300048913 | Ga0496110_0159041 | Ga0496110_0159041_79_975 | 292 |
| 68 | 3300048920 | Ga0496117_0033850 | Ga0496117_0033850_1151_2044 | 292 |
| 69 | 3300048921 | Ga0496118_0032003 | Ga0496118_0032003_2598_3491 | 292 |
| 70 | 3300048922 | Ga0496119_0001055 | Ga0496119_0001055_17916_18809 | 292 |
| 71 | 3300048923 | Ga0496120_0000600 | Ga0496120_0000600_30110_31003 | 292 |
| 72 | 3300053080 | Ga0500635_0018240 | Ga0500635_0018240_1024_1917 | 292 |
| 73 | 3300005577 | Ga0068857_100192079 | Ga0068857_1001920792 | 293 |
| 74 | 3300009093 | Ga0105240_10004370 | Ga0105240_1000437015 | 293 |
| 75 | 3300009174 | Ga0105241_10000410 | Ga0105241_1000041027 | 293 |
| 76 | 3300009545 | Ga0105237_10246299 | Ga0105237_102462992 | 293 |
| 77 | 3300025254 | Ga0209148_1000601 | Ga0209148_100060110 | 293 |
| 78 | 3300025911 | Ga0207654_10000001 | Ga0207654_10000001581 | 293 |
| 79 | 3300025913 | Ga0207695_10002392 | Ga0207695_1000239215 | 293 |
| 80 | 3300026116 | Ga0207674_10149133 | Ga0207674_101491332 | 293 |
| 81 | 3300036401 | Ga0373937_0276275 | Ga0373937_0276275_211_1182 | 293 |
| 82 | 3300046458 | Ga0495591_013684 | Ga0495591_013684_43_1011 | 293 |
| 83 | 3300046475 | Ga0495639_0167048 | Ga0495639_0167048_19_987 | 293 |
| 84 | 3300046537 | Ga0495598_0005827 | Ga0495598_0005827_1572_2540 | 293 |
| 85 | 3300046539 | Ga0495621_0000290 | Ga0495621_0000290_6624_7592 | 293 |
| 86 | 3300046615 | Ga0495656_0026212 | Ga0495656_0026212_675_1643 | 293 |
| 87 | 3300046681 | Ga0495647_0003356 | Ga0495647_0003356_2243_3154 | 293 |
| 88 | 3300047470 | Ga0495681_0015573 | Ga0495681_0015573_97_1065 | 293 |
| 89 | 3300053139 | Ga0500568_0009627 | Ga0500568_0009627_3500_4471 | 294 |
| 90 | 3300039437 | Ga0436365_1415673 | Ga0436365_1415673_239_1168 | 295 |
| 91 | 3300031616 | Ga0307508_10015107 | Ga0307508_100151078 | 296 |
| 92 | 3300031730 | Ga0307516_10059870 | Ga0307516_100598704 | 296 |
| 93 | 3300005445 | Ga0070708_100110819 | Ga0070708_1001108192 | 297 |
| 94 | 3300005467 | Ga0070706_100187667 | Ga0070706_1001876672 | 297 |
| 95 | 3300025910 | Ga0207684_10080270 | Ga0207684_100802702 | 297 |
| 96 | 3300031665 | Ga0316575_10050496 | Ga0316575_100504962 | 297 |
| 97 | 3300031691 | Ga0316579_10006685 | Ga0316579_100066852 | 297 |
| 98 | 3300032137 | Ga0316585_10068197 | Ga0316585_100681971 | 297 |
| 99 | 3300035398 | Ga0316574_0012751 | Ga0316574_0012751_478_1494 | 297 |
| 100 | 3300036712 | Ga0316584_0010300 | Ga0316584_0010300_2487_3503 | 297 |
| 101 | 3300005347 | Ga0070668_100107581 | Ga0070668_1001075812 | 300 |
| 102 | 3300005434 | Ga0070709_10095207 | Ga0070709_100952071 | 300 |
| 103 | 3300005548 | Ga0070665_100004754 | Ga0070665_1000047542 | 300 |
| 104 | 3300005842 | Ga0068858_100348766 | Ga0068858_1003487661 | 300 |
| 105 | 3300005844 | Ga0068862_100020139 | Ga0068862_1000201395 | 300 |
| 106 | 3300009093 | Ga0105240_10221598 | Ga0105240_102215983 | 300 |
| 107 | 3300013296 | Ga0157374_10199289 | Ga0157374_101992891 | 300 |
| 108 | 3300013307 | Ga0157372_10423187 | Ga0157372_104231872 | 300 |
| 109 | 3300025906 | Ga0207699_10124409 | Ga0207699_101244092 | 300 |
| 110 | 3300025913 | Ga0207695_10162008 | Ga0207695_101620082 | 300 |
| 111 | 3300025916 | Ga0207663_10237588 | Ga0207663_102375882 | 300 |
| 112 | 3300025949 | Ga0207667_10007244 | Ga0207667_1000724411 | 300 |
| 113 | 3300025972 | Ga0207668_10144954 | Ga0207668_101449542 | 300 |
| 114 | 3300028379 | Ga0268266_10006672 | Ga0268266_100066729 | 300 |
| 115 | 3300028380 | Ga0268265_10013002 | Ga0268265_100130025 | 300 |
| 116 | 3300045049 | Ga0466959_0014866 | Ga0466959_0014866_4041_5030 | 300 |
| 117 | 3300048929 | Ga0496126_0324187 | Ga0496126_0324187_12_926 | 300 |
| 118 | 3300005338 | Ga0068868_100174513 | Ga0068868_1001745132 | 301 |
| 119 | 3300005618 | Ga0068864_100117106 | Ga0068864_1001171062 | 301 |
| 120 | 3300005843 | Ga0068860_100002373 | Ga0068860_1000023738 | 301 |
| 121 | 3300010375 | Ga0105239_10012670 | Ga0105239_100126705 | 301 |
| 122 | 3300025903 | Ga0207680_10384684 | Ga0207680_103846841 | 301 |
| 123 | 3300028381 | Ga0268264_10003211 | Ga0268264_100032116 | 301 |
| 124 | 3300039437 | Ga0436365_0733224 | Ga0436365_0733224_2422_3348 | 302 |
| 125 | iso_pu_bacteria | 8022621104 | 8022623122 | 302 |
| 126 | 3300005535 | Ga0070684_100285000 | Ga0070684_1002850002 | 304 |
| 127 | 3300013308 | Ga0157375_10237192 | Ga0157375_102371922 | 304 |
| 128 | 3300044712 | Ga0453684_0092521 | Ga0453684_0092521_2669_3586 | 304 |
| 129 | 3300006852 | Ga0075433_10078644 | Ga0075433_100786442 | 305 |
| 130 | 3300025944 | Ga0207661_10055081 | Ga0207661_100550812 | 305 |
| 131 | 3300005467 | Ga0070706_100046944 | Ga0070706_1000469442 | 306 |
| 132 | 3300025910 | Ga0207684_10039740 | Ga0207684_100397402 | 306 |
| 133 | 3300025922 | Ga0207646_10252327 | Ga0207646_102523272 | 306 |
| 134 | 3300028794 | Ga0307515_10219756 | Ga0307515_102197561 | 306 |
| 135 | 3300031649 | Ga0307514_10047708 | Ga0307514_100477084 | 306 |
| 136 | iso_pu_bacteria | 2551306519 | 2553394667 | 306 |
| 137 | iso_pu_bacteria | 2684622632 | 2685151357 | 306 |
| 138 | iso_pu_bacteria | 2929233124 | 2929237029 | 306 |
| 139 | iso_pu_bacteria | 2965761152 | 2965764620 | 306 |
| 140 | iso_pu_bacteria | 2990265787 | 2990266623 | 306 |
| 141 | iso_pu_bacteria | 2993693658 | 2993695578 | 306 |
| 142 | iso_pu_bacteria | 2998344455 | 2998347752 | 306 |
| 143 | 3300005577 | Ga0068857_100006790 | Ga0068857_1000067904 | 307 |
| 144 | 3300005614 | Ga0068856_100062850 | Ga0068856_1000628505 | 307 |
| 145 | 3300005616 | Ga0068852_100001807 | Ga0068852_1000018076 | 307 |
| 146 | 3300009551 | Ga0105238_10029086 | Ga0105238_100290866 | 307 |
| 147 | 3300013105 | Ga0157369_10008774 | Ga0157369_100087746 | 307 |
| 148 | 3300013307 | Ga0157372_10011751 | Ga0157372_100117517 | 307 |
| 149 | 3300025904 | Ga0207647_10021069 | Ga0207647_100210694 | 307 |
| 150 | 3300025924 | Ga0207694_10019938 | Ga0207694_100199382 | 307 |
| 151 | 3300025949 | Ga0207667_10010973 | Ga0207667_100109736 | 307 |
| 152 | 3300026078 | Ga0207702_10089371 | Ga0207702_100893712 | 307 |
| 153 | 3300026116 | Ga0207674_10012325 | Ga0207674_100123252 | 307 |
| 154 | 3300026142 | Ga0207698_10015562 | Ga0207698_100155624 | 307 |
| 155 | 3300005445 | Ga0070708_100169712 | Ga0070708_1001697123 | 308 |
| 156 | 3300005467 | Ga0070706_100006114 | Ga0070706_1000061145 | 308 |
| 157 | 3300005467 | Ga0070706_100135084 | Ga0070706_1001350843 | 308 |
| 158 | 3300005467 | Ga0070706_100180912 | Ga0070706_1001809122 | 308 |
| 159 | 3300005468 | Ga0070707_100003495 | Ga0070707_1000034957 | 308 |
| 160 | 3300005468 | Ga0070707_100174754 | Ga0070707_1001747543 | 308 |
| 161 | 3300005471 | Ga0070698_100038588 | Ga0070698_1000385883 | 308 |
| 162 | 3300005471 | Ga0070698_100185484 | Ga0070698_1001854843 | 308 |
| 163 | 3300005536 | Ga0070697_100111791 | Ga0070697_1001117912 | 308 |
| 164 | 3300025910 | Ga0207684_10000857 | Ga0207684_1000085719 | 308 |
| 165 | 3300025910 | Ga0207684_10139436 | Ga0207684_101394363 | 308 |
| 166 | 3300025910 | Ga0207684_10142012 | Ga0207684_101420122 | 308 |
| 167 | 3300025922 | Ga0207646_10007201 | Ga0207646_100072014 | 308 |
| 168 | 3300025922 | Ga0207646_10008303 | Ga0207646_100083033 | 308 |
| 169 | 3300046616 | Ga0495668_0003452 | Ga0495668_0003452_76_1002 | 308 |
| 170 | 3300005339 | Ga0070660_100001558 | Ga0070660_10000155810 | 309 |
| 171 | 3300005563 | Ga0068855_100085213 | Ga0068855_1000852133 | 309 |
| 172 | 3300005614 | Ga0068856_100152762 | Ga0068856_1001527622 | 309 |
| 173 | 3300013104 | Ga0157370_10085188 | Ga0157370_100851882 | 309 |
| 174 | 3300025949 | Ga0207667_10068756 | Ga0207667_100687562 | 309 |
| 175 | 3300026078 | Ga0207702_10127073 | Ga0207702_101270733 | 309 |
| 176 | 3300038705 | Ga0237819_00227 | Ga0237819_00227_5219_6169 | 309 |
| 177 | iso_pu_bacteria | 2886627955 | 2886632406 | 309 |
| 178 | 3300045976 | Ga0466967_0001129 | Ga0466967_0001129_12389_13342 | 310 |
| 179 | 3300005445 | Ga0070708_100096015 | Ga0070708_1000960152 | 312 |
| 180 | 3300005471 | Ga0070698_100196242 | Ga0070698_1001962423 | 312 |
| 181 | 3300005518 | Ga0070699_100176502 | Ga0070699_1001765021 | 312 |
| 182 | 3300005539 | Ga0068853_100004002 | Ga0068853_1000040029 | 312 |
| 183 | 3300005544 | Ga0070686_100083699 | Ga0070686_1000836992 | 312 |
| 184 | 3300005563 | Ga0068855_100017747 | Ga0068855_1000177478 | 312 |
| 185 | 3300005563 | Ga0068855_100085166 | Ga0068855_1000851662 | 312 |
| 186 | 3300005617 | Ga0068859_100011901 | Ga0068859_1000119013 | 312 |
| 187 | 3300005719 | Ga0068861_100039447 | Ga0068861_1000394473 | 312 |
| 188 | 3300005843 | Ga0068860_100288108 | Ga0068860_1002881082 | 312 |
| 189 | 3300006028 | Ga0070717_10001729 | Ga0070717_1000172914 | 312 |
| 190 | 3300006931 | Ga0097620_100011901 | Ga0097620_1000119018 | 312 |
| 191 | 3300009545 | Ga0105237_10418430 | Ga0105237_104184302 | 312 |
| 192 | 3300009551 | Ga0105238_10007886 | Ga0105238_100078869 | 312 |
| 193 | 3300025885 | Ga0207653_10019522 | Ga0207653_100195221 | 312 |
| 194 | 3300025910 | Ga0207684_10052328 | Ga0207684_100523282 | 312 |
| 195 | 3300025922 | Ga0207646_10014866 | Ga0207646_100148663 | 312 |
| 196 | 3300025924 | Ga0207694_10006978 | Ga0207694_100069789 | 312 |
| 197 | 3300025949 | Ga0207667_10135339 | Ga0207667_101353391 | 312 |
| 198 | 3300026041 | Ga0207639_10001902 | Ga0207639_100019027 | 312 |
| 199 | 3300026118 | Ga0207675_100064370 | Ga0207675_1000643702 | 312 |
| 200 | 3300028381 | Ga0268264_10261995 | Ga0268264_102619952 | 312 |
| 201 | 3300028794 | Ga0307515_10000114 | Ga0307515_1000011420 | 312 |
| 202 | 3300038443 | Ga0395901_0404222 | Ga0395901_0404222_413_1366 | 312 |
| 203 | 3300053118 | Ga0500594_0017465 | Ga0500594_0017465_386_1351 | 312 |
| 204 | 3300005983 | Ga0081540_1029363 | Ga0081540_10293632 | 313 |
| 205 | 3300025910 | Ga0207684_10004134 | Ga0207684_100041343 | 313 |
| 206 | 3300005289 | Ga0065704_10099901 | Ga0065704_100999013 | 316 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5a3j-assembly8.cif.gz_H | crystal structure of the chloroplastic gamma-ketol reductase from arabidopsis thaliana bound to 13-oxo-9(z),11(e),15(z)- octadecatrienoic acid. | 0.9308 | 1 | 308 |
| 2eih-assembly1.cif.gz_A | crystal structure of nad-dependent alcohol dehydrogenase | 0.9288 | 1 | 309 |
| 4ide-assembly1.cif.gz_A | structure of the fragaria x ananassa enone oxidoreductase in complex with nadp+ and edhmf | 0.9241 | 2 | 307 |
| 2vn8-assembly2.cif.gz_B | crystal structure of human reticulon 4 interacting protein 1 in complex with nadph | 0.9195 | 2 | 309 |
| 3tqh-assembly1.cif.gz_A | structure of the quinone oxidoreductase from coxiella burnetii | 0.9161 | 1 | 309 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q0JDV3_9_115_3.90.180.10 | Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain | 0.976 | 1 | 94 | 3.90.180.10 |
| af_Q54II4_2_127_3.90.180.10 | Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain | 0.9617 | 2 | 119 | 3.90.180.10 |
| af_A0A0P0W924_2_174_3.90.180.10 | Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain | 0.958 | 15 | 136 | 3.90.180.10 |
| af_A0A0P0W8W7_12_109_3.90.180.10 | Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain | 0.9546 | 16 | 114 | 3.90.180.10 |
| 4a27B01 | Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain | 0.9545 | 1 | 123 | 3.90.180.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1S2UPU0-F1-model_v4 | Oxidoreductase | 0.9886 | 1 | 308 |
GO:0016491
|
| AF-A0A1S8G4K1-F1-model_v4 | deleted | 0.9883 | 65 | 193 |
|
| AF-A0A2V9NJB6-F1-model_v4 | NADPH:quinone reductase | 0.9867 | 140 | 309 |
GO:0008270
GO:0016491 |
| AF-A0A2V5TA69-F1-model_v4 | Enoyl reductase (ER) domain-containing protein | 0.9852 | 1 | 313 |
GO:0008270
GO:0016491 |
| AF-A0A6J4V8K4-F1-model_v4 | Enoyl reductase (ER) domain-containing protein | 0.985 | 1 | 191 |
GO:0008270
GO:0016491 |
Predicted Structure (AlphaFold2)
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