F314190

General Info

Members Datasets Scaffolds Average Seq Length
205 135 410 459

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0076346|Ga0451577_0076346_1334_2785
Length 483
Sequence VPDTRDRRDAPAINSDPNDLCYRPVTELSDLIHRRKLSPVELTRAYLDRIRRYAGEMNAFVTVTDDLALDEARAAETEIMRGRRRGPLHGIPYGAKDLLATAGIKTTWGAAPTKDQMFDKDATVIRKLREAGAVLLGKLGMVEFAGCLGYRFANASLTGPGRNPWNLDRWTGGSSSGSGAAVASGLVGFAIGTETWGSILCPSAFCGVTGLRPTYGRVSRAGGMVGSFTLDKVGPLARSAGDARLVLEAIAGPDPDDPSAADEPVRLGRRRLDPRRVRAALVPLDFVKTPGAEPEVGAAFRAAVDELRAAGLRIEEAKLPDFPASETATAVLYAEAMSTFEKFFEDGTVRLLKDPYAPYQREVTEALTGADYVKATRMRTVLQEKMLDFYSRYDVIVTPNFMSVAPPVAEDLVKTLPYSDPVGAIGNACGLPAIALPAGFGRGHMPASFQIMGSAFEEGLLLDLGELYQERTSHHRERPPKFA

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
73 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
74 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
75 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
76 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
77 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
78 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
79 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
80 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
81 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
82 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
83 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
84 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
85 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
86 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
87 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
88 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
89 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
90 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
91 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
92 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
93 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
94 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
95 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
96 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
97 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
100 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
113 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
114 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
115 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
119 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
122 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
125 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
126 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
127 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
128 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
129 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
130 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
131 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
132 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
133 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
134 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
135 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.98
Rhizosphere 98.54
Stem 0
Stem Tuber 0
Unclassified 13.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0076346 3300042876 Bacteria 2987
2 Ga0065707_10002701 3300005295 Bacteria 6005
3 Ga0070690_100011718 3300005330 Bacteria 5138
4 Ga0070670_100021821 3300005331 Bacteria 5507
5 Ga0070680_100055455 3300005336 Bacteria 3238
6 Ga0070689_100000308 3300005340 Bacteria 28448
7 Ga0070689_100039806 3300005340 Bacteria 3601
8 Ga0070692_10000575 3300005345 Bacteria 11525
9 Ga0070675_100072739 3300005354 Unclassified 2854
10 Ga0070688_100000096 3300005365 Bacteria 44901
11 Ga0070688_100000850 3300005365 Bacteria 15142
12 Ga0070688_100014264 3300005365 Unclassified 4500
13 Ga0070688_100040186 3300005365 Bacteria 2865
14 Ga0070703_10001040 3300005406 Bacteria 8651
15 Ga0070709_10013977 3300005434 Bacteria 4529
16 Ga0070701_10006224 3300005438 Bacteria 5005
17 Ga0070701_10036441 3300005438 Bacteria 2478
18 Ga0070705_100001464 3300005440 Bacteria 12485
19 Ga0070705_100102931 3300005440 Bacteria 1807
20 Ga0070694_100003233 3300005444 Bacteria 9727
21 Ga0070694_100052964 3300005444 Unclassified 2745
22 Ga0070708_100026504 3300005445 Bacteria 4963
23 Ga0070708_100233743 3300005445 Bacteria 1725
24 Ga0070663_100010967 3300005455 Bacteria 5668
25 Ga0070681_10059429 3300005458 Bacteria 3803
26 Ga0068867_100018645 3300005459 Bacteria 4933
27 Ga0070685_10001034 3300005466 Bacteria 14933
28 Ga0070685_10039450 3300005466 Unclassified 2683
29 Ga0070706_100018013 3300005467 Bacteria 6515
30 Ga0070706_100209281 3300005467 Bacteria 1821
31 Ga0070707_100017182 3300005468 Bacteria 6798
32 Ga0070707_100135476 3300005468 Bacteria 2396
33 Ga0070698_100014277 3300005471 Bacteria 8398
34 Ga0070698_100018507 3300005471 Bacteria 7335
35 Ga0070698_100045648 3300005471 Bacteria 4484
36 Ga0070699_100000867 3300005518 Bacteria 28163
37 Ga0070699_100018259 3300005518 Bacteria 6025
38 Ga0070697_100175552 3300005536 Bacteria 1815
39 Ga0070696_100000320 3300005546 Bacteria 29230
40 Ga0070704_100023477 3300005549 Bacteria 4030
41 Ga0070704_100080343 3300005549 Bacteria 2398
42 Ga0070704_100146338 3300005549 Bacteria 1852
43 Ga0068859_100002512 3300005617 Bacteria 18636
44 Ga0068859_100003257 3300005617 Bacteria 16536
45 Ga0068859_100108291 3300005617 Bacteria 2840
46 Ga0068864_100020575 3300005618 Bacteria 5521
47 Ga0068861_100032125 3300005719 Unclassified 3862
48 Ga0068863_100012170 3300005841 Bacteria 8309
49 Ga0068863_100109410 3300005841 Unclassified 2631
50 Ga0068858_100002199 3300005842 Bacteria 19750
51 Ga0068860_100067406 3300005843 Bacteria 3401
52 Ga0068860_100202831 3300005843 Bacteria 1922
53 Ga0068862_100025877 3300005844 Unclassified 4929
54 Ga0068862_100045684 3300005844 Bacteria 3737
55 Ga0081455_10027417 3300005937 Bacteria 5221
56 Ga0081538_10033279 3300005981 Bacteria 3434
57 Ga0070715_10006991 3300006163 Bacteria 3863
58 Ga0075428_100031667 3300006844 Bacteria 5843
59 Ga0075428_100059618 3300006844 Bacteria 4179
60 Ga0075431_100109289 3300006847 Unclassified 2854
61 Ga0075433_10001058 3300006852 Bacteria 19735
62 Ga0075433_10042025 3300006852 Unclassified 3964
63 Ga0075433_10154974 3300006852 Bacteria 2038
64 Ga0075434_100004339 3300006871 Bacteria 12755
65 Ga0075434_100027314 3300006871 Bacteria 5602
66 Ga0075434_100080977 3300006871 Bacteria 3244
67 Ga0075434_100087969 3300006871 Bacteria 3108
68 Ga0075434_100101580 3300006871 Unclassified 2883
69 Ga0075429_100000592 3300006880 Bacteria 27911
70 Ga0075436_100009042 3300006914 Bacteria 6817
71 Ga0097620_100002512 3300006931 Bacteria 18636
72 Ga0097620_100003257 3300006931 Bacteria 16536
73 Ga0097620_100108291 3300006931 Bacteria 2840
74 Ga0075435_100000619 3300007076 Bacteria 21836
75 Ga0075435_100138646 3300007076 Bacteria 2039
76 Ga0075435_100170293 3300007076 Bacteria 1837
77 Ga0111539_10000911 3300009094 Bacteria 38648
78 Ga0111539_10054816 3300009094 Unclassified 4742
79 Ga0114129_10003200 3300009147 Bacteria 22966
80 Ga0114129_10005041 3300009147 Bacteria 18589
81 Ga0114129_10022400 3300009147 Bacteria 8970
82 Ga0114129_10292132 3300009147 Archaea 2175
83 Ga0105243_10069853 3300009148 Bacteria 2834
84 Ga0105248_10004345 3300009177 Bacteria 15677
85 Ga0105248_10074048 3300009177 Bacteria 3827
86 Ga0105249_10017309 3300009553 Archaea 6398
87 Ga0157378_10055129 3300013297 Bacteria 3540
88 Ga0157378_10187965 3300013297 Unclassified 1946
89 Ga0163162_10013925 3300013306 Bacteria 7856
90 Ga0163163_10144213 3300014325 Unclassified 2424
91 Ga0157379_10001396 3300014968 Bacteria 19781
92 Ga0207653_10004572 3300025885 Bacteria 4338
93 Ga0207684_10013099 3300025910 Bacteria 7178
94 Ga0207684_10043345 3300025910 Bacteria 3814
95 Ga0207662_10000345 3300025918 Bacteria 21002
96 Ga0207646_10029562 3300025922 Bacteria 4977
97 Ga0207646_10036723 3300025922 Bacteria 4422
98 Ga0207646_10094965 3300025922 Unclassified 2671
99 Ga0207646_10115310 3300025922 Bacteria 2413
100 Ga0207659_10083135 3300025926 Bacteria 2372
101 Ga0207670_10000050 3300025936 Bacteria 88021
102 Ga0207670_10043108 3300025936 Bacteria 2978
103 Ga0207711_10001976 3300025941 Bacteria 18572
104 Ga0207689_10077651 3300025942 Bacteria 2729
105 Ga0207712_10019260 3300025961 Unclassified 4455
106 Ga0207703_10244917 3300026035 Unclassified 1613
107 Ga0207678_10031823 3300026067 Unclassified 4600
108 Ga0207648_10165862 3300026089 Bacteria 1952
109 Ga0207675_100026476 3300026118 Bacteria 5398
110 Ga0207675_100059121 3300026118 Unclassified 3577
111 Ga0209983_1002535 3300027665 Bacteria 3980
112 Ga0209971_1000193 3300027682 Bacteria 18214
113 Ga0209974_10000032 3300027876 Bacteria 32734
114 Ga0268265_10011308 3300028380 Bacteria 6035
115 Ga0268265_10071880 3300028380 Unclassified 2696
116 Ga0268264_10061114 3300028381 Bacteria 3160
117 Ga0265338_10037533 3300028800 Bacteria 4609
118 Ga0373934_0002475 3300035086 Bacteria 6802
119 Ga0373953_0020904 3300035117 Bacteria 2449
120 Ga0373957_0000410 3300035120 Bacteria 10804
121 Ga0373957_0026426 3300035120 Bacteria 2100
122 Ga0373931_0034925 3300035691 Bacteria 2612
123 Ga0373933_0083968 3300035724 Bacteria 1956
124 Ga0373937_0031424 3300036401 Bacteria 4812
125 Ga0373937_0060154 3300036401 Bacteria 3491
126 Ga0436363_0976256 3300039450 Bacteria 1539
127 Ga0451577_0150405 3300042876 Bacteria 2095
128 Ga0451577_0152904 3300042876 Bacteria 2076
129 Ga0453684_0059097 3300044712 Bacteria 4947
130 Ga0451576_0006223 3300045051 Bacteria 14701
131 Ga0451576_0017227 3300045051 Bacteria 7947
132 Ga0451576_0023451 3300045051 Bacteria 6680
133 Ga0451576_0034588 3300045051 Bacteria 5366
134 Ga0451576_0087214 3300045051 Bacteria 3246
135 Ga0451576_0288094 3300045051 Bacteria 1717
136 Ga0495629_0115710 3300046459 Bacteria 1869
137 Ga0495651_0043817 3300046462 Bacteria 3470
138 Ga0495582_0001147 3300046473 Bacteria 14878
139 Ga0495608_0010088 3300046511 Bacteria 6587
140 Ga0495618_0001179 3300046514 Bacteria 17709
141 Ga0495628_0009374 3300046516 Bacteria 8357
142 Ga0495630_0042758 3300046517 Bacteria 3384
143 Ga0495666_0013959 3300046526 Bacteria 4006
144 Ga0495587_0025075 3300046536 Bacteria 3646
145 Ga0495598_0004144 3300046537 Bacteria 3123
146 Ga0495657_0012316 3300046675 Bacteria 6355
147 Ga0495658_0001941 3300046683 Bacteria 10573
148 Ga0495613_0060351 3300046689 Bacteria 2778
149 Ga0495581_0024550 3300047315 Bacteria 3494
150 Ga0495604_0140977 3300047317 Bacteria 1722
151 Ga0495602_0101091 3300048088 Bacteria 2366
152 Ga0496102_0059849 3300048905 Unclassified 3484
153 Ga0496106_0118413 3300048909 Unclassified 2068
154 Ga0501031_0104002 3300049568 Bacteria 1853
155 Ga0501033_0021847 3300049570 Bacteria 4829
156 Ga0501034_0112926 3300049571 Bacteria 2707
157 Ga0501036_0012555 3300049572 Bacteria 7027
158 Ga0501037_0026502 3300049573 Unclassified 4285
159 Ga0501038_0002733 3300049574 Bacteria 16441
160 Ga0501038_0079607 3300049574 Bacteria 2762
161 Ga0501039_0004077 3300049575 Bacteria 10987
162 Ga0501040_0001818 3300049576 Bacteria 13720
163 Ga0501041_0000775 3300049577 Bacteria 17140
164 Ga0501042_0000226 3300049578 Bacteria 27005
165 Ga0501046_0007339 3300049580 Bacteria 9698
166 Ga0501048_0006508 3300049582 Bacteria 8879
167 Ga0501068_0005372 3300049584 Bacteria 7004
168 Ga0501070_0199288 3300049586 Bacteria 1644
169 Ga0501071_0003573 3300049587 Bacteria 9733
170 Ga0501072_0000274 3300049588 Bacteria 37244
171 Ga0501075_0000535 3300049591 Bacteria 23011
172 Ga0501076_0001328 3300049592 Bacteria 16522
173 Ga0501077_0003223 3300049593 Bacteria 9824
174 Ga0501077_0034768 3300049593 Unclassified 3207
175 Ga0501079_0000958 3300049741 Bacteria 19916
176 Ga0501079_0065761 3300049741 Bacteria 2797
177 Ga0501079_0134750 3300049741 Bacteria 1923
178 Ga0501080_0010981 3300049742 Bacteria 8291
179 Ga0501081_0002086 3300049743 Bacteria 12472
180 Ga0501083_0032802 3300049744 Bacteria 3559
181 Ga0501045_0003507 3300049824 Bacteria 10743
182 Ga0501045_0061474 3300049824 Bacteria 2755
183 nmdc:mga05p37_10286_c1 3300050507 Bacteria 11110
184 nmdc:mga05p37_11224_c1 3300050507 Bacteria 10650
185 nmdc:mga05p37_568377_c1 3300050507 Bacteria 1287
186 nmdc:mga09592_126758_c1 3300050508 Unclassified 2195
187 nmdc:mga06r32_129469_c1 3300050510 Bacteria 2494
188 nmdc:mga06r32_86028_c1 3300050510 Unclassified 3066
189 nmdc:mga08y16_17460_c1 3300050511 Bacteria 7557
190 nmdc:mga08y16_6173_c1 3300050511 Bacteria 12575
191 nmdc:mga08y16_88252_c1 3300050511 Unclassified 3232
192 nmdc:mga0n895_170594_c1 3300050512 Archaea 2208
193 nmdc:mga0n895_242_c1 3300050512 Bacteria 34800
194 nmdc:mga0n895_83702_c1 3300050512 Bacteria 3182
195 nmdc:mga0rr50_10994_c1 3300050513 Bacteria 5772
196 nmdc:mga0rr50_191949_c1 3300050513 Bacteria 1674
197 nmdc:mga08x19_85131_c1 3300050514 Bacteria 2080
198 nmdc:mga0a205_13277_c1 3300050515 Bacteria 7660
199 nmdc:mga0a205_2424_c2 3300050515 Unclassified 3235
200 nmdc:mga0a205_307432_c1 3300050515 Bacteria 1458
201 nmdc:mga0a205_8_c1 3300050515 Bacteria 127532
202 Ga0495595_0001282 3300053084 Bacteria 9802
203 Ga0495619_0119777 3300053085 Bacteria 1804
204 Ga0501084_0005150 3300054114 Bacteria 10690
205 Ga0530510_0005399 3300061734 Bacteria 8847
206 Ga0451577_0076346
207 Ga0065707_10002701
208 Ga0070690_100011718
209 Ga0070670_100021821
210 Ga0070680_100055455
211 Ga0070689_100000308
212 Ga0070689_100039806
213 Ga0070692_10000575
214 Ga0070675_100072739
215 Ga0070688_100000096
216 Ga0070688_100000850
217 Ga0070688_100014264
218 Ga0070688_100040186
219 Ga0070703_10001040
220 Ga0070709_10013977
221 Ga0070701_10006224
222 Ga0070701_10036441
223 Ga0070705_100001464
224 Ga0070705_100102931
225 Ga0070694_100003233
226 Ga0070694_100052964
227 Ga0070708_100026504
228 Ga0070708_100233743
229 Ga0070663_100010967
230 Ga0070681_10059429
231 Ga0068867_100018645
232 Ga0070685_10001034
233 Ga0070685_10039450
234 Ga0070706_100018013
235 Ga0070706_100209281
236 Ga0070707_100017182
237 Ga0070707_100135476
238 Ga0070698_100014277
239 Ga0070698_100018507
240 Ga0070698_100045648
241 Ga0070699_100000867
242 Ga0070699_100018259
243 Ga0070697_100175552
244 Ga0070696_100000320
245 Ga0070704_100023477
246 Ga0070704_100080343
247 Ga0070704_100146338
248 Ga0068859_100002512
249 Ga0068859_100003257
250 Ga0068859_100108291
251 Ga0068864_100020575
252 Ga0068861_100032125
253 Ga0068863_100012170
254 Ga0068863_100109410
255 Ga0068858_100002199
256 Ga0068860_100067406
257 Ga0068860_100202831
258 Ga0068862_100025877
259 Ga0068862_100045684
260 Ga0081455_10027417
261 Ga0081538_10033279
262 Ga0070715_10006991
263 Ga0075428_100031667
264 Ga0075428_100059618
265 Ga0075431_100109289
266 Ga0075433_10001058
267 Ga0075433_10042025
268 Ga0075433_10154974
269 Ga0075434_100004339
270 Ga0075434_100027314
271 Ga0075434_100080977
272 Ga0075434_100087969
273 Ga0075434_100101580
274 Ga0075429_100000592
275 Ga0075436_100009042
276 Ga0097620_100002512
277 Ga0097620_100003257
278 Ga0097620_100108291
279 Ga0075435_100000619
280 Ga0075435_100138646
281 Ga0075435_100170293
282 Ga0111539_10000911
283 Ga0111539_10054816
284 Ga0114129_10003200
285 Ga0114129_10005041
286 Ga0114129_10022400
287 Ga0114129_10292132
288 Ga0105243_10069853
289 Ga0105248_10004345
290 Ga0105248_10074048
291 Ga0105249_10017309
292 Ga0157378_10055129
293 Ga0157378_10187965
294 Ga0163162_10013925
295 Ga0163163_10144213
296 Ga0157379_10001396
297 Ga0207653_10004572
298 Ga0207684_10013099
299 Ga0207684_10043345
300 Ga0207662_10000345
301 Ga0207646_10029562
302 Ga0207646_10036723
303 Ga0207646_10094965
304 Ga0207646_10115310
305 Ga0207659_10083135
306 Ga0207670_10000050
307 Ga0207670_10043108
308 Ga0207711_10001976
309 Ga0207689_10077651
310 Ga0207712_10019260
311 Ga0207703_10244917
312 Ga0207678_10031823
313 Ga0207648_10165862
314 Ga0207675_100026476
315 Ga0207675_100059121
316 Ga0209983_1002535
317 Ga0209971_1000193
318 Ga0209974_10000032
319 Ga0268265_10011308
320 Ga0268265_10071880
321 Ga0268264_10061114
322 Ga0265338_10037533
323 Ga0373934_0002475
324 Ga0373953_0020904
325 Ga0373957_0000410
326 Ga0373957_0026426
327 Ga0373931_0034925
328 Ga0373933_0083968
329 Ga0373937_0031424
330 Ga0373937_0060154
331 Ga0436363_0976256
332 Ga0451577_0150405
333 Ga0451577_0152904
334 Ga0453684_0059097
335 Ga0451576_0006223
336 Ga0451576_0017227
337 Ga0451576_0023451
338 Ga0451576_0034588
339 Ga0451576_0087214
340 Ga0451576_0288094
341 Ga0495629_0115710
342 Ga0495651_0043817
343 Ga0495582_0001147
344 Ga0495608_0010088
345 Ga0495618_0001179
346 Ga0495628_0009374
347 Ga0495630_0042758
348 Ga0495666_0013959
349 Ga0495587_0025075
350 Ga0495598_0004144
351 Ga0495657_0012316
352 Ga0495658_0001941
353 Ga0495613_0060351
354 Ga0495581_0024550
355 Ga0495604_0140977
356 Ga0495602_0101091
357 Ga0496102_0059849
358 Ga0496106_0118413
359 Ga0501031_0104002
360 Ga0501033_0021847
361 Ga0501034_0112926
362 Ga0501036_0012555
363 Ga0501037_0026502
364 Ga0501038_0002733
365 Ga0501038_0079607
366 Ga0501039_0004077
367 Ga0501040_0001818
368 Ga0501041_0000775
369 Ga0501042_0000226
370 Ga0501046_0007339
371 Ga0501048_0006508
372 Ga0501068_0005372
373 Ga0501070_0199288
374 Ga0501071_0003573
375 Ga0501072_0000274
376 Ga0501075_0000535
377 Ga0501076_0001328
378 Ga0501077_0003223
379 Ga0501077_0034768
380 Ga0501079_0000958
381 Ga0501079_0065761
382 Ga0501079_0134750
383 Ga0501080_0010981
384 Ga0501081_0002086
385 Ga0501083_0032802
386 Ga0501045_0003507
387 Ga0501045_0061474
388 nmdc:mga05p37_10286_c1
389 nmdc:mga05p37_11224_c1
390 nmdc:mga05p37_568377_c1
391 nmdc:mga09592_126758_c1
392 nmdc:mga06r32_129469_c1
393 nmdc:mga06r32_86028_c1
394 nmdc:mga08y16_17460_c1
395 nmdc:mga08y16_6173_c1
396 nmdc:mga08y16_88252_c1
397 nmdc:mga0n895_170594_c1
398 nmdc:mga0n895_242_c1
399 nmdc:mga0n895_83702_c1
400 nmdc:mga0rr50_10994_c1
401 nmdc:mga0rr50_191949_c1
402 nmdc:mga08x19_85131_c1
403 nmdc:mga0a205_13277_c1
404 nmdc:mga0a205_2424_c2
405 nmdc:mga0a205_307432_c1
406 nmdc:mga0a205_8_c1
407 Ga0495595_0001282
408 Ga0495619_0119777
409 Ga0501084_0005150
410 Ga0530510_0005399

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01425

Amidase

Amidase

41

462

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wj3-assembly2.cif.gz_D crystal structure of the asparagine transamidosome from pseudomonas aeruginosa 0.9146 5 455
6c6g-assembly1.cif.gz_B-2 an unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme. inhibitor bound complex. 0.9084 8 449
3ip4-assembly1.cif.gz_A the high resolution structure of gatcab 0.9067 1 456
3ip4-assembly1.cif.gz_A the high resolution structure of gatcab 0.8954 1 456
4wj3-assembly2.cif.gz_D crystal structure of the asparagine transamidosome from pseudomonas aeruginosa 0.8936 5 455
ID Description Score Start End Superfamily
4wj3D00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9146 5 455 3.90.1300.10
2dqnA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9118 4 456 3.90.1300.10
af_P9WQ93_21_468_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9114 9 451 3.90.1300.10
af_Q9LI77_43_527_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.9101 10 449 3.90.1300.10
6c6gA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.91 8 449 3.90.1300.10
ID Description Score Start End GO Terms
AF-A0A382MZS9-F1-model_v4 Amidase domain-containing protein 0.9896 1 106 GO:0003824
AF-A0A524FFN2-F1-model_v4 Amidase 0.9821 1 119 GO:0012505
AF-A0A3S1E0Z4-F1-model_v4 Amidase 0.9773 5 126 GO:0012505
AF-A0A3C1FAL0-F1-model_v4 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A (EC 6.3.5.-) 0.9754 8 119 GO:0016740
GO:0016874
AF-A0A382MZS9-F1-model_v4 Amidase domain-containing protein 0.9715 1 106 GO:0003824

Map