F314039

General Info

Members Datasets Scaffolds Average Seq Length
205 143 191 507

Family's Representative Sequence

Representative Sequence 3300031711|Ga0265314_10064654|Ga0265314_100646541
Length 504
Sequence MLRIGEPLTRGDLRTAYEATPKLEFTLEALSRIDRGAKAIADVIASGATVYGVNTGFGLLANTEIPKDDLVALQRNLVLSHACGVGRHLADEIVRLVLVLKIASLSRGASGVRRETVAALARLVEAEVYPCIPSKGSVGASGDLAPLAHLSGVLLGIGSARIEGREVPARQALEHCGLTPIVLGPKEGLALLNGTQVSTALALAGLFETEKVFTAAIIAGAMSTDAFKGSDTPFDARIHALRGQPGQIDVAAMLRSLMLGSEIRESHRAPGDDGKVQDPYSFRCQPQVMGAVLDVLRAAAKTLQIEASGVTDNPLVLDDGTVVSGGNFHAEPVALAADQIAIGLCEIGNISERRTAILVDPKMSGLPAFLVKESGLNSGFMIAQVTAAALVAENRMFSHPASVDTVPTSAGQEDHVSMATHGARRLLDMAENAASVVAIELLAAAQGLDFRRPLRSSAPLERAAQEIRALVRPYEQDRYFAPDIEAITGYVRTGALRGLVGEIF

Samples

Sample ID Description Type Environment
1 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
2 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
3 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
4 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
5 2643221583 Caulobacter sp. Root655 Isolate Unclassified
6 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
7 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
8 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
9 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
10 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
11 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
12 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
13 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
14 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
15 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
16 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
17 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
18 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
19 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
20 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
21 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
22 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
23 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
35 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
50 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
51 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
75 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
76 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
77 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
78 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
79 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
80 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
83 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
84 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
85 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
88 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
89 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
90 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
91 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
92 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
93 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
94 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
95 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
96 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
97 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
98 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
99 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
100 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
101 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
102 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
103 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
104 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
105 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
106 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
107 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
108 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
109 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
110 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
111 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
121 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
122 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
123 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
124 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
125 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
126 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
127 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
128 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
129 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
130 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
131 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
132 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
133 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
134 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
135 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
136 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
137 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
138 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
139 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
140 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
141 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
142 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
143 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.17
Metatranscriptomes 0
Isolates 6.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 32.2
Nodule 0
Rhizoplane 1.95
Rhizosphere 53.66
Stem 0
Stem Tuber 0
Unclassified 12.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1000045 3300001904 Bacteria 20426
2 JGI24737J22298_10011587 3300001990 Bacteria 2887
3 JGI24735J21928_10014211 3300002067 Bacteria 2495
4 JGI25165J46597_1000065 3300003214 Bacteria 199761
5 Ga0055537_1002545 3300003773 Bacteria 6026
6 Ga0055536_1000349 3300003781 Bacteria 34265
7 Ga0055536_1016209 3300003781 Bacteria 2503
8 Ga0055530_10005125 3300003791 Bacteria 6399
9 Ga0055540_1001103 3300003792 Bacteria 17034
10 Ga0055531_10000804 3300003794 Bacteria 26020
11 Ga0055531_10006632 3300003794 Bacteria 6516
12 Ga0055531_10006778 3300003794 Bacteria 6399
13 Ga0070660_100014622 3300005339 Bacteria 5661
14 Ga0070708_100062953 3300005445 Bacteria 3319
15 Ga0070678_100030226 3300005456 Bacteria 3721
16 Ga0070706_100092318 3300005467 Bacteria 2808
17 Ga0070698_100000425 3300005471 Bacteria 45081
18 Ga0070684_100013043 3300005535 Bacteria 6686
19 Ga0070697_100008019 3300005536 Bacteria 8233
20 Ga0070665_100001751 3300005548 Bacteria 24831
21 Ga0068857_100095502 3300005577 Bacteria 2664
22 Ga0068858_100000122 3300005842 Bacteria 80502
23 Ga0075365_10071848 3300006038 Bacteria 2330
24 Ga0075368_10016498 3300006042 Bacteria 2753
25 Ga0075368_10036913 3300006042 Bacteria 1910
26 Ga0075362_10001042 3300006177 Bacteria 8544
27 Ga0075367_10039144 3300006178 Bacteria 2763
28 Ga0075369_10042576 3300006186 Bacteria 1947
29 Ga0075366_10087293 3300006195 Bacteria 1867
30 Ga0099795_10021479 3300007788 Bacteria 2118
31 Ga0105240_10003013 3300009093 Bacteria 26500
32 Ga0105240_10060208 3300009093 Bacteria 4734
33 Ga0105245_10016967 3300009098 Bacteria 6356
34 Ga0105243_10047472 3300009148 Bacteria 3381
35 Ga0105241_10111596 3300009174 Bacteria 2189
36 Ga0105248_10001383 3300009177 Bacteria 27020
37 Ga0105248_10004749 3300009177 Bacteria 15038
38 Ga0105248_10227159 3300009177 Bacteria 2101
39 Ga0105238_10001190 3300009551 Bacteria 26203
40 Ga0105238_10002228 3300009551 Bacteria 19578
41 Ga0105239_10005851 3300010375 Bacteria 14335
42 Ga0105239_10065749 3300010375 Bacteria 3983
43 Ga0157370_10029614 3300013104 Bacteria 5370
44 Ga0157370_10100112 3300013104 Bacteria 2716
45 Ga0157369_10085361 3300013105 Bacteria 3374
46 Ga0157369_10187271 3300013105 Bacteria 2176
47 Ga0213872_10007511 3300021361 Bacteria 5356
48 Ga0209233_1000107 3300025261 Bacteria 267399
49 Ga0209565_1000132 3300025263 Bacteria 104716
50 Ga0209676_1000155 3300025292 Bacteria 165151
51 Ga0209676_1000246 3300025292 Bacteria 116315
52 Ga0209676_1002301 3300025292 Bacteria 13913
53 Ga0209676_1005723 3300025292 Bacteria 6383
54 Ga0209564_1010648 3300025295 Bacteria 4207
55 Ga0209050_1000005 3300025298 Bacteria 1557793
56 Ga0209050_1002471 3300025298 Bacteria 15733
57 Ga0209050_1005943 3300025298 Bacteria 7429
58 Ga0209050_1006202 3300025298 Bacteria 7171
59 Ga0209051_1000507 3300025303 Bacteria 49396
60 Ga0209257_1000169 3300025304 Bacteria 171227
61 Ga0209257_1002782 3300025304 Bacteria 16521
62 Ga0209257_1003743 3300025304 Bacteria 12596
63 Ga0209257_1003760 3300025304 Bacteria 12537
64 Ga0207656_10014395 3300025321 Bacteria 3046
65 Ga0207647_10010878 3300025904 Bacteria 6403
66 Ga0207695_10003675 3300025913 Bacteria 21388
67 Ga0207695_10043543 3300025913 Bacteria 4783
68 Ga0207695_10055357 3300025913 Bacteria 4134
69 Ga0207671_10002439 3300025914 Bacteria 19902
70 Ga0207657_10011672 3300025919 Bacteria 8708
71 Ga0207657_10073085 3300025919 Bacteria 2899
72 Ga0207652_10026017 3300025921 Bacteria 4870
73 Ga0207694_10001388 3300025924 Bacteria 20808
74 Ga0207694_10004869 3300025924 Bacteria 10425
75 Ga0207694_10019379 3300025924 Bacteria 5143
76 Ga0207694_10062726 3300025924 Bacteria 2894
77 Ga0207706_10027684 3300025933 Bacteria 5067
78 Ga0207706_10052699 3300025933 Bacteria 3592
79 Ga0207711_10022986 3300025941 Bacteria 5219
80 Ga0207711_10029555 3300025941 Bacteria 4624
81 Ga0207667_10099137 3300025949 Bacteria 3006
82 Ga0207667_10261252 3300025949 Bacteria 1770
83 Ga0207712_10093476 3300025961 Bacteria 2219
84 Ga0207703_10000159 3300026035 Bacteria 78106
85 Ga0207678_10021236 3300026067 Bacteria 5691
86 Ga0207702_10020163 3300026078 Bacteria 5523
87 Ga0207674_10029823 3300026116 Bacteria 5740
88 Ga0207683_10043318 3300026121 Bacteria 3933
89 Ga0268266_10000127 3300028379 Bacteria 149198
90 Ga0307515_10029804 3300028794 Bacteria 9202
91 Ga0307515_10083706 3300028794 Bacteria 4109
92 Ga0265340_10018885 3300031247 Bacteria 3553
93 Ga0265327_10003418 3300031251 Bacteria 15196
94 Ga0307513_10132033 3300031456 Bacteria 2441
95 Ga0307508_10000302 3300031616 Bacteria 60090
96 Ga0265314_10064654 3300031711 Bacteria 2476
97 Ga0307405_10003711 3300031731 Bacteria 7088
98 Ga0307414_10005436 3300032004 Bacteria 7015
99 Ga0373927_0070752 3300035695 Bacteria 2258
100 Ga0373947_0027619 3300035725 Bacteria 3322
101 Ga0395899_0074757 3300037312 Bacteria 2475
102 Ga0395900_0015211 3300037418 Bacteria 7847
103 Ga0436365_0593161 3300039437 Bacteria 3929
104 Ga0436361_0215883 3300039447 Bacteria 5086
105 Ga0436361_0548373 3300039447 Bacteria 6533
106 Ga0436361_0890300 3300039447 Bacteria 16425
107 Ga0495627_000248 3300046453 Bacteria 56262
108 Ga0495627_005103 3300046453 Bacteria 5364
109 Ga0495638_0000513 3300046460 Bacteria 45532
110 Ga0495638_0000903 3300046460 Bacteria 30346
111 Ga0495638_0001360 3300046460 Bacteria 22422
112 Ga0495638_0008494 3300046460 Bacteria 7278
113 Ga0495638_0019246 3300046460 Bacteria 4518
114 Ga0495610_0000046 3300046512 Bacteria 153789
115 Ga0495610_0001049 3300046512 Bacteria 25401
116 Ga0495610_0002093 3300046512 Bacteria 17052
117 Ga0495610_0014552 3300046512 Bacteria 4617
118 Ga0495620_0046945 3300046515 Bacteria 1862
119 Ga0495631_0002658 3300046518 Bacteria 9964
120 Ga0495643_0000004 3300046522 Bacteria 519944
121 Ga0495643_0040960 3300046522 Bacteria 2527
122 Ga0495648_0000266 3300046524 Bacteria 58974
123 Ga0495648_0008692 3300046524 Bacteria 7959
124 Ga0495668_0007389 3300046616 Bacteria 7033
125 Ga0495625_0001259 3300046660 Bacteria 31933
126 Ga0495625_0027463 3300046660 Bacteria 4284
127 Ga0495672_0004077 3300047320 Bacteria 12190
128 Ga0495673_0000091 3300047469 Bacteria 187985
129 Ga0495673_0014453 3300047469 Bacteria 4104
130 Ga0495686_0000100 3300047472 Bacteria 180492
131 Ga0495686_0001810 3300047472 Bacteria 21581
132 Ga0495686_0048233 3300047472 Bacteria 2686
133 Ga0495686_0056295 3300047472 Bacteria 2457
134 Ga0496106_0015041 3300048909 Bacteria 5726
135 Ga0496107_0000059 3300048910 Bacteria 53768
136 Ga0496108_0001120 3300048911 Bacteria 20955
137 Ga0496115_0000418 3300048918 Bacteria 34681
138 Ga0496117_0009995 3300048920 Bacteria 8723
139 Ga0496118_0006264 3300048921 Bacteria 13156
140 Ga0496121_0000122 3300048924 Bacteria 172465
141 Ga0496121_0000238 3300048924 Bacteria 118593
142 Ga0496121_0002701 3300048924 Bacteria 26528
143 Ga0496122_0019015 3300048925 Bacteria 6302
144 Ga0496124_0028139 3300048927 Bacteria 5031
145 Ga0496124_0160339 3300048927 Bacteria 1753
146 Ga0496125_0016652 3300048928 Bacteria 7048
147 Ga0495678_001445 3300049459 Bacteria 18706
148 Ga0501033_0007841 3300049570 Bacteria 8269
149 Ga0501034_0025399 3300049571 Bacteria 6030
150 Ga0501034_0176686 3300049571 Bacteria 2101
151 Ga0501036_0041967 3300049572 Bacteria 3872
152 Ga0501038_0022713 3300049574 Bacteria 5616
153 Ga0501043_0031974 3300049579 Bacteria 4136
154 Ga0501047_0009229 3300049581 Bacteria 9311
155 Ga0501083_0098053 3300049744 Bacteria 1934
156 Ga0501035_0017078 3300049822 Bacteria 6686
157 Ga0501044_0030965 3300049823 Bacteria 5633
158 nmdc:mga03683_7626_c1 3300050489 Bacteria 3766
159 nmdc:mga0yw44_5824_c1 3300050492 Bacteria 5879
160 nmdc:mga06z11_11719_c1 3300050494 Bacteria 3790
161 nmdc:mga06z11_1450_c1 3300050494 Bacteria 8823
162 nmdc:mga06z11_8855_c1 3300050494 Bacteria 4217
163 nmdc:mga04h51_23294_c1 3300050495 Bacteria 1884
164 Ga0500635_0000398 3300053080 Bacteria 13232
165 Ga0500578_0000636 3300053086 Bacteria 42530
166 Ga0500643_008810 3300053087 Bacteria 3921
167 Ga0500644_0000012 3300053088 Bacteria 117525
168 Ga0500644_0001639 3300053088 Bacteria 5848
169 Ga0500651_0091659 3300053093 Bacteria 1870
170 Ga0500556_0007650 3300053104 Bacteria 3092
171 Ga0500556_0029014 3300053104 Bacteria 1862
172 Ga0500569_001107 3300053109 Bacteria 4937
173 Ga0500594_0000128 3300053118 Bacteria 21319
174 Ga0500608_000122 3300053122 Bacteria 32333
175 Ga0500608_003799 3300053122 Bacteria 5738
176 Ga0500614_005490 3300053123 Bacteria 2662
177 Ga0500618_000626 3300053125 Bacteria 21346
178 Ga0500559_0000031 3300053136 Bacteria 114782
179 Ga0500559_0001712 3300053136 Bacteria 12048
180 Ga0500559_0004183 3300053136 Bacteria 6923
181 Ga0500564_000036 3300053138 Bacteria 38057
182 Ga0500616_0003632 3300053153 Bacteria 11597
183 Ga0500616_0014317 3300053153 Bacteria 4562
184 Ga0500622_0001520 3300053156 Bacteria 18385
185 Ga0500622_0006371 3300053156 Bacteria 6872
186 Ga0500624_000009 3300053157 Bacteria 178763
187 Ga0500624_000144 3300053157 Bacteria 29941
188 Ga0500636_0004455 3300053177 Bacteria 7927
189 Ga0500636_0011537 3300053177 Bacteria 5173
190 Ga0500645_011546 3300053730 Bacteria 2881
191 Ga0500661_000142 3300055283 Bacteria 12130

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049744 Ga0501083_0098053 Ga0501083_0098053_602_1873 419
2 3300048925 Ga0496122_0019015 Ga0496122_0019015_3490_5022 466
3 3300048927 Ga0496124_0028139 Ga0496124_0028139_3469_5001 466
4 3300048928 Ga0496125_0016652 Ga0496125_0016652_610_2142 466
5 3300037312 Ga0395899_0074757 Ga0395899_0074757_505_2040 467
6 3300006178 Ga0075367_10039144 Ga0075367_100391442 487
7 3300009177 Ga0105248_10227159 Ga0105248_102271592 489
8 3300049571 Ga0501034_0176686 Ga0501034_0176686_518_2035 491
9 3300005456 Ga0070678_100030226 Ga0070678_1000302263 493
10 3300026121 Ga0207683_10043318 Ga0207683_100433183 493
11 3300031456 Ga0307513_10132033 Ga0307513_101320332 493
12 3300006042 Ga0075368_10036913 Ga0075368_100369131 495
13 3300031247 Ga0265340_10018885 Ga0265340_100188852 495
14 3300050494 nmdc:mga06z11_11719_c1 nmdc:mga06z11_11719_c1_1312_2856 495
15 3300050495 nmdc:mga04h51_23294_c1 nmdc:mga04h51_23294_c1_286_1830 495
16 3300005842 Ga0068858_100000122 Ga0068858_10000012268 497
17 3300009098 Ga0105245_10016967 Ga0105245_100169673 497
18 3300009148 Ga0105243_10047472 Ga0105243_100474722 497
19 3300026035 Ga0207703_10000159 Ga0207703_1000015911 497
20 3300031616 Ga0307508_10000302 Ga0307508_100003028 497
21 3300001990 JGI24737J22298_10011587 JGI24737J22298_100115872 499
22 3300031711 Ga0265314_10064654 Ga0265314_100646541 500
23 3300046460 Ga0495638_0008494 Ga0495638_0008494_2525_4042 500
24 3300047320 Ga0495672_0004077 Ga0495672_0004077_6573_8108 500
25 3300003214 JGI25165J46597_1000065 JGI25165J46597_1000065174 502
26 3300009551 Ga0105238_10002228 Ga0105238_100022283 502
27 3300025261 Ga0209233_1000107 Ga0209233_100010734 502
28 3300025924 Ga0207694_10001388 Ga0207694_1000138814 502
29 3300039447 Ga0436361_0215883 Ga0436361_0215883_3412_4944 502
30 iso_pu_bacteria 2582581279 2585146271 502
31 iso_pu_bacteria 2643221563 2643832848 502
32 iso_pu_bacteria 2643221608 2644053357 502
33 iso_pu_bacteria 2852680915 2852684452 502
34 iso_pu_bacteria 2643221699 2644547307 504
35 iso_pu_bacteria 2857504554 2857505230 504
36 3300009177 Ga0105248_10001383 Ga0105248_100013839 505
37 3300025941 Ga0207711_10022986 Ga0207711_100229864 505
38 3300047469 Ga0495673_0014453 Ga0495673_0014453_497_2017 505
39 3300047472 Ga0495686_0000100 Ga0495686_0000100_137932_139452 505
40 3300050492 nmdc:mga0yw44_5824_c1 nmdc:mga0yw44_5824_c1_187_1707 505
41 3300053087 Ga0500643_008810 Ga0500643_008810_1241_2761 505
42 3300053157 Ga0500624_000144 Ga0500624_000144_11028_12548 505
43 3300053177 Ga0500636_0004455 Ga0500636_0004455_1210_2730 505
44 iso_pu_bacteria 2510917020 2511123390 505
45 iso_pu_bacteria 2643221583 2643925191 505
46 iso_pu_bacteria 2643221614 2644086139 505
47 iso_pu_bacteria 2643221661 2644345194 505
48 iso_pu_bacteria 2643221666 2644369468 505
49 iso_pu_bacteria 8001845381 8001847341 505
50 3300003781 Ga0055536_1000349 Ga0055536_100034918 506
51 3300003781 Ga0055536_1016209 Ga0055536_10162092 506
52 3300003794 Ga0055531_10000804 Ga0055531_100008043 506
53 3300025292 Ga0209676_1000155 Ga0209676_100015554 506
54 3300025292 Ga0209676_1000246 Ga0209676_100024656 506
55 3300025298 Ga0209050_1002471 Ga0209050_10024715 506
56 3300025304 Ga0209257_1000169 Ga0209257_100016972 506
57 3300028794 Ga0307515_10083706 Ga0307515_100837062 506
58 3300032004 Ga0307414_10005436 Ga0307414_100054365 506
59 3300046460 Ga0495638_0000903 Ga0495638_0000903_23570_25090 506
60 3300046512 Ga0495610_0002093 Ga0495610_0002093_2938_4458 506
61 3300046518 Ga0495631_0002658 Ga0495631_0002658_1304_2824 506
62 3300046524 Ga0495648_0000266 Ga0495648_0000266_44213_45733 506
63 3300048911 Ga0496108_0001120 Ga0496108_0001120_6445_7968 506
64 3300048924 Ga0496121_0000238 Ga0496121_0000238_42084_43607 506
65 3300048927 Ga0496124_0160339 Ga0496124_0160339_59_1582 506
66 3300049459 Ga0495678_001445 Ga0495678_001445_2099_3619 506
67 3300053080 Ga0500635_0000398 Ga0500635_0000398_9319_10839 506
68 3300053086 Ga0500578_0000636 Ga0500578_0000636_25915_27435 506
69 3300053088 Ga0500644_0000012 Ga0500644_0000012_43780_45300 506
70 3300053088 Ga0500644_0001639 Ga0500644_0001639_910_2430 506
71 3300053104 Ga0500556_0029014 Ga0500556_0029014_157_1677 506
72 3300053118 Ga0500594_0000128 Ga0500594_0000128_17768_19288 506
73 3300053138 Ga0500564_000036 Ga0500564_000036_1219_2739 506
74 3300053156 Ga0500622_0001520 Ga0500622_0001520_10851_12371 506
75 3300006038 Ga0075365_10071848 Ga0075365_100718482 507
76 3300021361 Ga0213872_10007511 Ga0213872_100075113 507
77 3300025961 Ga0207712_10093476 Ga0207712_100934762 507
78 3300039447 Ga0436361_0548373 Ga0436361_0548373_4688_6217 507
79 3300039447 Ga0436361_0890300 Ga0436361_0890300_13806_15335 507
80 3300046453 Ga0495627_000248 Ga0495627_000248_10599_12155 507
81 3300046524 Ga0495648_0008692 Ga0495648_0008692_2101_3657 507
82 3300049570 Ga0501033_0007841 Ga0501033_0007841_6222_7745 507
83 3300049571 Ga0501034_0025399 Ga0501034_0025399_3417_4940 507
84 3300049572 Ga0501036_0041967 Ga0501036_0041967_320_1843 507
85 3300049574 Ga0501038_0022713 Ga0501038_0022713_2044_3567 507
86 3300049579 Ga0501043_0031974 Ga0501043_0031974_258_1781 507
87 3300049581 Ga0501047_0009229 Ga0501047_0009229_351_1874 507
88 3300049822 Ga0501035_0017078 Ga0501035_0017078_1777_3300 507
89 3300049823 Ga0501044_0030965 Ga0501044_0030965_3755_5278 507
90 3300053122 Ga0500608_000122 Ga0500608_000122_25207_26736 507
91 3300053156 Ga0500622_0006371 Ga0500622_0006371_122_1651 507
92 3300053157 Ga0500624_000009 Ga0500624_000009_19464_20987 507
93 iso_pu_bacteria 2738543031 2739349132 507
94 3300001904 JGI24736J21556_1000045 JGI24736J21556_100004522 508
95 3300002067 JGI24735J21928_10014211 JGI24735J21928_100142113 508
96 3300003773 Ga0055537_1002545 Ga0055537_10025455 508
97 3300003791 Ga0055530_10005125 Ga0055530_100051255 508
98 3300003792 Ga0055540_1001103 Ga0055540_10011037 508
99 3300003794 Ga0055531_10006632 Ga0055531_100066325 508
100 3300003794 Ga0055531_10006778 Ga0055531_100067785 508
101 3300005339 Ga0070660_100014622 Ga0070660_1000146224 508
102 3300005445 Ga0070708_100062953 Ga0070708_1000629532 508
103 3300005467 Ga0070706_100092318 Ga0070706_1000923182 508
104 3300005471 Ga0070698_100000425 Ga0070698_10000042538 508
105 3300005535 Ga0070684_100013043 Ga0070684_1000130434 508
106 3300005536 Ga0070697_100008019 Ga0070697_1000080198 508
107 3300005548 Ga0070665_100001751 Ga0070665_1000017519 508
108 3300005577 Ga0068857_100095502 Ga0068857_1000955022 508
109 3300006042 Ga0075368_10016498 Ga0075368_100164982 508
110 3300006177 Ga0075362_10001042 Ga0075362_100010427 508
111 3300006186 Ga0075369_10042576 Ga0075369_100425762 508
112 3300006195 Ga0075366_10087293 Ga0075366_100872932 508
113 3300007788 Ga0099795_10021479 Ga0099795_100214792 508
114 3300009093 Ga0105240_10003013 Ga0105240_100030132 508
115 3300009093 Ga0105240_10060208 Ga0105240_100602083 508
116 3300009174 Ga0105241_10111596 Ga0105241_101115962 508
117 3300009177 Ga0105248_10004749 Ga0105248_100047498 508
118 3300009551 Ga0105238_10001190 Ga0105238_100011902 508
119 3300010375 Ga0105239_10005851 Ga0105239_100058513 508
120 3300010375 Ga0105239_10065749 Ga0105239_100657493 508
121 3300013104 Ga0157370_10029614 Ga0157370_100296144 508
122 3300013104 Ga0157370_10100112 Ga0157370_101001123 508
123 3300013105 Ga0157369_10085361 Ga0157369_100853612 508
124 3300013105 Ga0157369_10187271 Ga0157369_101872712 508
125 3300025263 Ga0209565_1000132 Ga0209565_100013231 508
126 3300025292 Ga0209676_1002301 Ga0209676_10023016 508
127 3300025292 Ga0209676_1005723 Ga0209676_10057233 508
128 3300025295 Ga0209564_1010648 Ga0209564_10106483 508
129 3300025298 Ga0209050_1000005 Ga0209050_1000005497 508
130 3300025298 Ga0209050_1005943 Ga0209050_10059433 508
131 3300025298 Ga0209050_1006202 Ga0209050_10062025 508
132 3300025303 Ga0209051_1000507 Ga0209051_100050725 508
133 3300025304 Ga0209257_1002782 Ga0209257_10027825 508
134 3300025304 Ga0209257_1003743 Ga0209257_10037435 508
135 3300025304 Ga0209257_1003760 Ga0209257_10037605 508
136 3300025321 Ga0207656_10014395 Ga0207656_100143952 508
137 3300025904 Ga0207647_10010878 Ga0207647_100108783 508
138 3300025913 Ga0207695_10003675 Ga0207695_1000367516 508
139 3300025913 Ga0207695_10043543 Ga0207695_100435433 508
140 3300025913 Ga0207695_10055357 Ga0207695_100553572 508
141 3300025914 Ga0207671_10002439 Ga0207671_100024398 508
142 3300025919 Ga0207657_10011672 Ga0207657_100116722 508
143 3300025919 Ga0207657_10073085 Ga0207657_100730853 508
144 3300025921 Ga0207652_10026017 Ga0207652_100260172 508
145 3300025924 Ga0207694_10004869 Ga0207694_100048697 508
146 3300025924 Ga0207694_10019379 Ga0207694_100193794 508
147 3300025924 Ga0207694_10062726 Ga0207694_100627263 508
148 3300025933 Ga0207706_10027684 Ga0207706_100276845 508
149 3300025933 Ga0207706_10052699 Ga0207706_100526993 508
150 3300025941 Ga0207711_10029555 Ga0207711_100295553 508
151 3300025949 Ga0207667_10099137 Ga0207667_100991372 508
152 3300025949 Ga0207667_10261252 Ga0207667_102612522 508
153 3300026067 Ga0207678_10021236 Ga0207678_100212363 508
154 3300026078 Ga0207702_10020163 Ga0207702_100201636 508
155 3300026116 Ga0207674_10029823 Ga0207674_100298236 508
156 3300028379 Ga0268266_10000127 Ga0268266_100001273 508
157 3300028794 Ga0307515_10029804 Ga0307515_100298043 508
158 3300031251 Ga0265327_10003418 Ga0265327_100034188 508
159 3300031731 Ga0307405_10003711 Ga0307405_100037112 508
160 3300035695 Ga0373927_0070752 Ga0373927_0070752_492_2024 508
161 3300035725 Ga0373947_0027619 Ga0373947_0027619_71_1603 508
162 3300037418 Ga0395900_0015211 Ga0395900_0015211_77_1609 508
163 3300039437 Ga0436365_0593161 Ga0436365_0593161_2182_3711 508
164 3300046453 Ga0495627_005103 Ga0495627_005103_3727_5277 508
165 3300046460 Ga0495638_0000513 Ga0495638_0000513_18403_19938 508
166 3300046460 Ga0495638_0001360 Ga0495638_0001360_5207_6742 508
167 3300046460 Ga0495638_0019246 Ga0495638_0019246_850_2382 508
168 3300046512 Ga0495610_0000046 Ga0495610_0000046_1284_2819 508
169 3300046512 Ga0495610_0001049 Ga0495610_0001049_4915_6459 508
170 3300046512 Ga0495610_0014552 Ga0495610_0014552_2080_3630 508
171 3300046515 Ga0495620_0046945 Ga0495620_0046945_42_1580 508
172 3300046522 Ga0495643_0000004 Ga0495643_0000004_379231_380775 508
173 3300046522 Ga0495643_0040960 Ga0495643_0040960_962_2500 508
174 3300046616 Ga0495668_0007389 Ga0495668_0007389_1431_2969 508
175 3300046660 Ga0495625_0001259 Ga0495625_0001259_26103_27638 508
176 3300046660 Ga0495625_0027463 Ga0495625_0027463_634_2169 508
177 3300047469 Ga0495673_0000091 Ga0495673_0000091_19288_20823 508
178 3300047472 Ga0495686_0001810 Ga0495686_0001810_6065_7600 508
179 3300047472 Ga0495686_0048233 Ga0495686_0048233_1093_2643 508
180 3300047472 Ga0495686_0056295 Ga0495686_0056295_224_1774 508
181 3300048909 Ga0496106_0015041 Ga0496106_0015041_132_1682 508
182 3300048910 Ga0496107_0000059 Ga0496107_0000059_17997_19547 508
183 3300048918 Ga0496115_0000418 Ga0496115_0000418_1989_3518 508
184 3300048920 Ga0496117_0009995 Ga0496117_0009995_3639_5177 508
185 3300048921 Ga0496118_0006264 Ga0496118_0006264_4687_6225 508
186 3300048924 Ga0496121_0000122 Ga0496121_0000122_16861_18399 508
187 3300048924 Ga0496121_0002701 Ga0496121_0002701_787_2337 508
188 3300050489 nmdc:mga03683_7626_c1 nmdc:mga03683_7626_c1_891_2435 508
189 3300050494 nmdc:mga06z11_1450_c1 nmdc:mga06z11_1450_c1_6909_8441 508
190 3300050494 nmdc:mga06z11_8855_c1 nmdc:mga06z11_8855_c1_1303_2847 508
191 3300053093 Ga0500651_0091659 Ga0500651_0091659_38_1576 508
192 3300053104 Ga0500556_0007650 Ga0500556_0007650_593_2128 508
193 3300053109 Ga0500569_001107 Ga0500569_001107_1284_2822 508
194 3300053122 Ga0500608_003799 Ga0500608_003799_431_1969 508
195 3300053123 Ga0500614_005490 Ga0500614_005490_51_1589 508
196 3300053125 Ga0500618_000626 Ga0500618_000626_12929_14461 508
197 3300053136 Ga0500559_0000031 Ga0500559_0000031_15300_16835 508
198 3300053136 Ga0500559_0001712 Ga0500559_0001712_1306_2841 508
199 3300053136 Ga0500559_0004183 Ga0500559_0004183_299_1837 508
200 3300053153 Ga0500616_0003632 Ga0500616_0003632_8909_10471 508
201 3300053153 Ga0500616_0014317 Ga0500616_0014317_1814_3352 508
202 3300053177 Ga0500636_0011537 Ga0500636_0011537_1394_2926 508
203 3300053730 Ga0500645_011546 Ga0500645_011546_100_1635 508
204 3300055283 Ga0500661_000142 Ga0500661_000142_6693_8225 508
205 iso_pu_bacteria 2523231067 2523467667 508

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00221

Lyase_aromatic

Aromatic amino acid lyase

8

469

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gkj-assembly1.cif.gz_A histidine ammonia-lyase (hal) mutant y280f from pseudomonas putida 0.9693 1 505
1b8f-assembly1.cif.gz_A histidine ammonia-lyase (hal) from pseudomonas putida 0.9692 1 505
1eb4-assembly1.cif.gz_A histidine ammonia-lyase (hal) mutant f329a from pseudomonas putida 0.9687 1 505
1gk2-assembly1.cif.gz_A histidine ammonia-lyase (hal) mutant f329g from pseudomonas putida 0.9671 1 505
1gk3-assembly1.cif.gz_A histidine ammonia-lyase (hal) mutant d145a from pseudomonas putida 0.9635 1 505
ID Description Score Start End Superfamily
af_Q4E133_201_513_1.20.200.10 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9649 199 501 1.20.200.10
1eb4A02 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9631 199 505 1.20.200.10
1b8fA01 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9477 1 195 1.10.275.10
af_Q556V9_1_206_1.10.275.10 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9465 2 196 1.10.275.10
1b8fA01 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.943 1 195 1.10.275.10
ID Description Score Start End GO Terms
AF-F6IMI8-F1-model_v4 Histidine ammonia-lyase (Histidase) (EC 4.3.1.3) 0.9894 2 508 GO:0004397
GO:0005737
GO:0019556
GO:0019557
AF-F6IMI8-F1-model_v4 Histidine ammonia-lyase (Histidase) (EC 4.3.1.3) 0.9855 2 508 GO:0004397
GO:0005737
GO:0019556
GO:0019557
AF-A0A1G9W2Z0-F1-model_v4 Histidine ammonia-lyase (Histidase) (EC 4.3.1.3) 0.9854 1 508 GO:0004397
GO:0005737
GO:0019556
GO:0019557
AF-A0A526Q542-F1-model_v4 Histidine ammonia-lyase (EC 4.3.1.3) 0.983 145 297 GO:0004397
AF-A0A3S1NMN6-F1-model_v4 deleted 0.9825 203 368

Feature Viewer

pLDDT pTM Quality
91.12 0.93 High
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Predicted Structure (AlphaFold2)

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