F313907

General Info

Members Datasets Scaffolds Average Seq Length
205 141 410 279

Family's Representative Sequence

Representative Sequence 3300025904|Ga0207647_10124147|Ga0207647_101241471
Length 330
Sequence LSRIKFLANMRVPEMLHDRAMSICGGSKRALSIATTTHLEGTVADRPPMEALVKTIASLFLSTYPDANSLQIAASSVALVKQINAALHAVAIDVEIPDVSNALSKLLLDLPYKIQEAEATSRKRGKVLLEAIVQEAARGGVTLTTQDLTASPALMGDVAAEHSRYFDVGLVGLAAGNQTARMMAEALLFGSGRPTLLLPDAMEVGILDHIVIAWDGSRVAARAVADARAFLERASMITVLTVTDEKPLPGHGIGERLALGLRARGLAAEAAPIQAGDRSIGTALQEHALKIGGKLLVMGGYGHSRIRDFVLGGATEGILTDLRLPVLLSH

Samples

Sample ID Description Type Environment
1 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
4 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
5 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
6 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
7 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
8 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
9 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
10 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
11 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
12 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
13 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
14 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
15 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
16 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
17 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
18 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
21 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
23 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
24 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
25 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
26 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
27 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
28 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
29 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
30 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
31 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
32 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
33 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
34 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
35 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
36 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
37 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
38 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
39 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
40 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
41 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
42 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
43 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
44 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
45 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
46 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
47 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
48 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
49 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
50 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
51 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
52 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
53 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
54 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
55 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
56 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
57 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
60 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
61 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
62 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
63 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
64 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
65 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
66 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
67 2588253730 Mesorhizobium huakuii 7653R Isolate Rhizosphere
68 2643221550 Mesorhizobium sp. Root552 Isolate Unclassified
69 2643221564 Mesorhizobium sp. Root157 Isolate Unclassified
70 2643221595 Mesorhizobium sp. Root695 Isolate Unclassified
71 2643221623 Aminobacter sp. DSM 101952 Root100 Isolate Unclassified
72 2643221627 Mesorhizobium sp. Root102 Isolate Unclassified
73 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
74 2738543024 Aminobacter sp. AP02 Isolate Unclassified
75 2756170246 Mesorhizobium loti DSM 2626 Isolate Nodule
76 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
77 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
78 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
79 2844002411 Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 Isolate Nodule
80 2854911287 Brucella lupini LUP21 Isolate Unclassified
81 2856342000 Mesorhizobium sp. M5C.F.Cr.IN.023.01.1.1 Isolate Nodule
82 2856356410 Mesorhizobium sp. M4B.F.Ca.ET.088.02.2.1 Isolate Nodule
83 2857367948 Mesorhizobium sp. M7A.F.Ca.US.002.01.1.1 Isolate Nodule
84 2869162929 Mesorhizobium sanjuanii BSA136 Isolate Nodule
85 2871466892 Mesorhizobium sp. M7D.F.Ca.US.004.01.2.1 Isolate Nodule
86 2871488783 Mesorhizobium sp. M4B.F.Ca.ET.203.01.1.1 Isolate Nodule
87 2871495908 Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 Isolate Nodule
88 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
89 2876377896 Mesorhizobium sp. M2C.T.Ca.TU.009.01.2.1 Isolate Nodule
90 2878753008 Mesorhizobium sp. M4B.F.Ca.ET.150.01.1.1 Isolate Nodule
91 2878760144 Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 Isolate Nodule
92 2878767105 Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 Isolate Nodule
93 2882912400 Mesorhizobium sp. M4B.F.Ca.ET.013.02.1.1 Isolate Nodule
94 2885318864 Mesorhizobium sp. M4B.F.Ca.ET.017.02.2.1 Isolate Nodule
95 2888337043 Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 Isolate Nodule
96 2888350351 Mesorhizobium sp. M2A.F.Ca.ET.046.03.2.1 Isolate Nodule
97 2889010040 Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 Isolate Nodule
98 2889016732 Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1 Isolate Nodule
99 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
100 2903540706 Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 Isolate Nodule
101 2906354277 Mesorhizobium sp. M2A.F.Ca.ET.040.01.1.1 Isolate Nodule
102 2906378014 Mesorhizobium sp. M7D.F.Ca.US.004.03.1.1 Isolate Nodule
103 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
104 2922130491 Mesorhizobium sp. M00.F.Ca.ET.038.03.1.1 Isolate Nodule
105 2922185730 Mesorhizobium sp. M2A.F.Ca.ET.037.01.1.1 Isolate Nodule
106 2924733363 Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1 Isolate Nodule
107 2924762789 Mesorhizobium sp. WSM4303 Isolate Unclassified
108 2936996657 Sinorhizobium meliloti USDA1025 Isolate Nodule
109 2937891427 Mesorhizobium sp. M1A.F.Ca.IN.022.07.1.1 Isolate Nodule
110 2937994558 Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 Isolate Nodule
111 2938014810 Mesorhizobium sp. M2C.T.Ca.TU.002.02.1.1 Isolate Nodule
112 2958100919 Mesorhizobium sp. M2A.F.Ca.ET.015.02.1.1 Isolate Nodule
113 2958165035 Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 Isolate Nodule
114 2958172287 Mesorhizobium sp. M2A.F.Ca.ET.029.05.1.1 Isolate Nodule
115 2961163497 Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 Isolate Nodule
116 2961170736 Mesorhizobium sp. M4B.F.Ca.ET.200.01.1.1 Isolate Nodule
117 2965018300 Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 Isolate Nodule
118 2965119406 Mesorhizobium sp. M2A.F.Ca.ET.067.02.1.1 Isolate Nodule
119 2968003550 Mesorhizobium sp. M4B.F.Ca.ET.215.01.1.1 Isolate Nodule
120 2968171901 Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 Isolate Nodule
121 2970489779 Mesorhizobium sp. M7A.F.Ca.US.008.03.1.1 Isolate Nodule
122 2970503327 Mesorhizobium sp. M4B.F.Ca.ET.190.01.1.1 Isolate Nodule
123 2970524798 Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 Isolate Nodule
124 2970540015 Mesorhizobium sp. M5C.F.Ca.IN.020.29.1.1 Isolate Nodule
125 2970554993 Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 Isolate Nodule
126 2977821940 Mesorhizobium sp. M4B.F.Ca.ET.214.01.1.1 Isolate Nodule
127 2977828996 Mesorhizobium sp. M4B.F.Ca.ET.089.01.1.1 Isolate Nodule
128 2977971508 Mesorhizobium sp. M2A.F.Ca.ET.039.01.1.1 Isolate Nodule
129 2977986579 Mesorhizobium intechi BD68 Isolate Unclassified
130 2979710463 Mesorhizobium sp. M2A.F.Ca.ET.017.03.2.1 Isolate Nodule
131 2979742915 Mesorhizobium sp. M2A.F.Ca.ET.046.02.1.1 Isolate Nodule
132 2979808191 Mesorhizobium sp. M4B.F.Ca.ET.172.01.1.1 Isolate Nodule
133 2987659509 Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 Isolate Nodule
134 2987666974 Mesorhizobium sp. WSM4306 Isolate Unclassified
135 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
136 3004188549 Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 Isolate Nodule
137 3004268573 Mesorhizobium sp. M7A.F.Ca.US.010.02.1.1 Isolate Nodule
138 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
139 8004374579 Mesorhizobium sp. M4B.F.Ca.ET.211.01.1.1 Isolate Nodule
140 8004395343 Mesorhizobium sp. M5C.F.Ca.IN.020.14.1.1 Isolate Nodule
141 8055617313 Mesorhizobium onobrychidis OM4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 61.46
Metatranscriptomes 0
Isolates 38.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.85
Nodule 31.22
Rhizoplane 0.98
Rhizosphere 53.66
Stem 0
Stem Tuber 0
Unclassified 9.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207647_10124147 3300025904 Bacteria 1520
2 rootL2_10339009 3300003322 Bacteria 2133
3 Ga0055542_1001693 3300003762 Bacteria 9672
4 Ga0055529_1002931 3300003763 Bacteria 3034
5 Ga0070665_100005795 3300005548 Bacteria 12676
6 Ga0070665_100036668 3300005548 Plasmid 4930
7 Ga0068852_100524596 3300005616 Unclassified 1182
8 Ga0075365_10004901 3300006038 Bacteria 7154
9 Ga0075365_10018128 3300006038 Bacteria 4322
10 Ga0105240_10232713 3300009093 Bacteria 2140
11 Ga0105241_10107215 3300009174 Bacteria 2231
12 Ga0105237_10086292 3300009545 Bacteria 3128
13 Ga0105239_10020245 3300010375 Bacteria 7341
14 Ga0105239_10290865 3300010375 Bacteria 1840
15 Ga0105239_10310053 3300010375 Bacteria 1778
16 Ga0157374_10055022 3300013296 Bacteria 3713
17 Ga0163163_10190753 3300014325 Bacteria 2098
18 Ga0182006_1083774 3300015261 Bacteria 1159
19 Ga0182007_10035532 3300015262 Bacteria 1679
20 Ga0209148_1000570 3300025254 Bacteria 34441
21 Ga0209455_1000583 3300025272 Bacteria 23691
22 Ga0207688_10096910 3300025901 Bacteria 1699
23 Ga0207695_10178848 3300025913 Bacteria 2043
24 Ga0207428_10422560 3300027907 Unclassified 974
25 Ga0268266_10088011 3300028379 Bacteria 2718
26 Ga0316579_10175283 3300031691 Unclassified 1036
27 Ga0316577_10112571 3300031733 Unclassified 1527
28 Ga0307409_100686473 3300031995 Unclassified 1022
29 Ga0307414_10447027 3300032004 Bacteria 1133
30 Ga0316583_10027406 3300032133 Unclassified 2034
31 Ga0316585_10034965 3300032137 Unclassified 1590
32 Ga0395899_0057275 3300037312 Bacteria 2878
33 Ga0395900_0023424 3300037418 Bacteria 6320
34 Ga0395898_0113740 3300037466 Bacteria 2593
35 Ga0395901_0074111 3300038443 Bacteria 3551
36 Ga0395901_0215817 3300038443 Bacteria 2007
37 Ga0451853_1607505 3300041512 Bacteria 1055
38 Ga0495638_0008256 3300046460 Bacteria 7398
39 Ga0496112_0241669 3300048915 Bacteria 1758
40 Ga0496119_0008144 3300048922 Bacteria 9278
41 Ga0496120_0003224 3300048923 Bacteria 15142
42 Ga0496124_0226589 3300048927 Bacteria 1401
43 Ga0501031_0000010 3300049568 Bacteria 146435
44 Ga0501031_0060978 3300049568 Bacteria 2458
45 Ga0501031_0089384 3300049568 Bacteria 2008
46 Ga0501032_0000023 3300049569 Bacteria 146435
47 Ga0501032_0004356 3300049569 Bacteria 10691
48 Ga0501032_0129671 3300049569 Bacteria 1664
49 Ga0501033_0000104 3300049570 Bacteria 81029
50 Ga0501033_0000481 3300049570 Bacteria 37583
51 Ga0501033_0003148 3300049570 Bacteria 13709
52 Ga0501033_0009997 3300049570 Bacteria 7285
53 Ga0501033_0075348 3300049570 Bacteria 2476
54 Ga0501033_0110328 3300049570 Bacteria 2002
55 Ga0501033_0122595 3300049570 Bacteria 1885
56 Ga0501033_0201677 3300049570 Unclassified 1421
57 Ga0501034_0000116 3300049571 Bacteria 146442
58 Ga0501034_0001737 3300049571 Bacteria 27988
59 Ga0501034_0027516 3300049571 Bacteria 5785
60 Ga0501034_0037408 3300049571 Bacteria 4914
61 Ga0501034_0258286 3300049571 Bacteria 1685
62 Ga0501034_0379965 3300049571 Bacteria 1338
63 Ga0501036_0000015 3300049572 Bacteria 146442
64 Ga0501036_0066133 3300049572 Bacteria 3058
65 Ga0501036_0192746 3300049572 Bacteria 1714
66 Ga0501036_0307168 3300049572 Bacteria 1326
67 Ga0501036_0526997 3300049572 Unclassified 982
68 Ga0501036_0566979 3300049572 Bacteria 943
69 Ga0501037_0000023 3300049573 Bacteria 146542
70 Ga0501037_0105923 3300049573 Unclassified 2027
71 Ga0501037_0215413 3300049573 Bacteria 1353
72 Ga0501038_0000025 3300049574 Bacteria 146542
73 Ga0501038_0016965 3300049574 Bacteria 6588
74 Ga0501038_0034014 3300049574 Bacteria 4484
75 Ga0501038_0179985 3300049574 Unclassified 1706
76 Ga0501039_0000691 3300049575 Bacteria 24283
77 Ga0501039_0035425 3300049575 Bacteria 3851
78 Ga0501040_0042577 3300049576 Bacteria 3093
79 Ga0501043_0000070 3300049579 Bacteria 89839
80 Ga0501043_0008235 3300049579 Bacteria 8216
81 Ga0501043_0032419 3300049579 Bacteria 4108
82 Ga0501043_0034979 3300049579 Bacteria 3951
83 Ga0501043_0174050 3300049579 Unclassified 1678
84 Ga0501043_0300976 3300049579 Unclassified 1225
85 Ga0501046_0132918 3300049580 Bacteria 1886
86 Ga0501047_0001811 3300049581 Bacteria 20645
87 Ga0501047_0005596 3300049581 Bacteria 11833
88 Ga0501047_0031757 3300049581 Bacteria 5094
89 Ga0501047_0084663 3300049581 Unclassified 3047
90 Ga0501068_0298728 3300049584 Unclassified 1031
91 Ga0501069_0014665 3300049585 Bacteria 4192
92 Ga0501069_0077778 3300049585 Bacteria 1865
93 Ga0501070_0001438 3300049586 Bacteria 21315
94 Ga0501070_0015970 3300049586 Bacteria 6310
95 Ga0501070_0018099 3300049586 Bacteria 5910
96 Ga0501070_0104570 3300049586 Bacteria 2341
97 Ga0501070_0221415 3300049586 Unclassified 1552
98 Ga0501073_0023442 3300049589 Bacteria 4432
99 Ga0501074_0019596 3300049590 Bacteria 4910
100 Ga0501080_0039746 3300049742 Bacteria 4390
101 Ga0501080_0477839 3300049742 Unclassified 1115
102 Ga0501083_0339246 3300049744 Unclassified 977
103 Ga0501035_0000516 3300049822 Bacteria 43429
104 Ga0501035_0001099 3300049822 Bacteria 28343
105 Ga0501035_0001454 3300049822 Bacteria 24283
106 Ga0501035_0008387 3300049822 Bacteria 9622
107 Ga0501035_0026988 3300049822 Bacteria 5251
108 Ga0501035_0055954 3300049822 Bacteria 3521
109 Ga0501035_0146252 3300049822 Bacteria 2052
110 Ga0501035_0224838 3300049822 Unclassified 1601
111 Ga0501035_0355747 3300049822 Bacteria 1224
112 Ga0501044_0000069 3300049823 Bacteria 125974
113 Ga0501044_0000505 3300049823 Bacteria 47475
114 Ga0501044_0016573 3300049823 Bacteria 7909
115 Ga0501044_0021759 3300049823 Bacteria 6837
116 Ga0501044_0057509 3300049823 Bacteria 3991
117 Ga0501044_0178362 3300049823 Bacteria 2092
118 Ga0501045_0070806 3300049824 Bacteria 2566
119 nmdc:mga0yw44_3708_c1 3300050492 Bacteria 6839
120 nmdc:mga06z11_112696_c1 3300050494 Bacteria 1508
121 nmdc:mga06z11_136997_c1 3300050494 Bacteria 1380
122 nmdc:mga06z11_15289_c1 3300050494 Bacteria 2727
123 nmdc:mga0sz30_2246_c2 3300050516 Bacteria 1389
124 Ga0500620_000177 3300053155 Bacteria 13017
125 Ga0501082_0169176 3300060353 Bacteria 1900
126 Ga0501082_0459841 3300060353 Bacteria 1112
127 2514418011 2513237305 Bacteria 7293571
128 2514591960 2513237351 Bacteria 6968952
129 2514592031 2513237351 Bacteria 6968952
130 2514592501 2513237351 Bacteria 6968952
131 2588516513 2588253730 Bacteria 6881675
132 2643772654 2643221550 Bacteria 4619371
133 2643837915 2643221564 Bacteria 4193379
134 2643988149 2643221595 Bacteria 6565519
135 2644132319 2643221623 Bacteria 5239945
136 2644155107 2643221627 Bacteria 6761570
137 2723578427 2721755686 Bacteria 7343952
138 2739308488 2738543024 Bacteria 5603683
139 2756677911 2756170246 Bacteria 7451806
140 2765467635 2765235802 Bacteria 5618596
141 2839996753 2839993093 Bacteria 5512535
142 2842339746 2842333319 Bacteria 8899485
143 2844004891 2844002411 Bacteria 7168230
144 2854914669 2854911287 Bacteria 5582813
145 2856345045 2856342000 Bacteria 7176905
146 2856362286 2856356410 Bacteria 6297484
147 2857368324 2857367948 Bacteria 6965560
148 2869162952 2869162929 Bacteria 6399702
149 2871467251 2871466892 Bacteria 6923287
150 2871492303 2871488783 Bacteria 6929816
151 2871501035 2871495908 Bacteria 6935695
152 2874125513 2874123672 Bacteria 7238285
153 2876385509 2876377896 Bacteria 6565995
154 2878759683 2878753008 Bacteria 6922523
155 2878765059 2878760144 Bacteria 6823465
156 2878772221 2878767105 Bacteria 6898628
157 2882918809 2882912400 Bacteria 6801539
158 2885322214 2885318864 Bacteria 6729568
159 2888340282 2888337043 Bacteria 6629336
160 2888352039 2888350351 Bacteria 7372807
161 2889014024 2889010040 Bacteria 6749192
162 2889021267 2889016732 Bacteria 6700763
163 2903496966 2903492973 Bacteria 13473544
164 2903545850 2903540706 Bacteria 7062119
165 2906355699 2906354277 Bacteria 6991324
166 2906381907 2906378014 Bacteria 6911440
167 2917558715 2917554339 Bacteria 4987857
168 2922130540 2922130491 Bacteria 7173936
169 2922191616 2922185730 Bacteria 7113964
170 2924734175 2924733363 Bacteria 7574837
171 2924768779 2924762789 Bacteria 6561353
172 2936997917 2936996657 Bacteria 6298727
173 2937897437 2937891427 Bacteria 6357007
174 2937999701 2937994558 Bacteria 7036190
175 2938017170 2938014810 Bacteria 6700592
176 2958106344 2958100919 Bacteria 6800575
177 2958170171 2958165035 Bacteria 6906348
178 2958175856 2958172287 Bacteria 6716688
179 2961168624 2961163497 Bacteria 6901077
180 2961173624 2961170736 Bacteria 7072258
181 2965023444 2965018300 Bacteria 6883036
182 2965123377 2965119406 Bacteria 6956431
183 2968005781 2968003550 Bacteria 6929263
184 2968177035 2968171901 Bacteria 6894245
185 2970489967 2970489779 Bacteria 6517260
186 2970506216 2970503327 Bacteria 7099517
187 2970530260 2970524798 Bacteria 6840927
188 2970540943 2970540015 Bacteria 6977556
189 2970559906 2970554993 Bacteria 6814252
190 2977828205 2977821940 Bacteria 6906439
191 2977834669 2977828996 Bacteria 7007971
192 2977973125 2977971508 Bacteria 7472917
193 2977992634 2977986579 Bacteria 6581278
194 2979711311 2979710463 Bacteria 6785254
195 2979745217 2979742915 Bacteria 7301278
196 2979810938 2979808191 Bacteria 7179355
197 2987664652 2987659509 Bacteria 6966464
198 2987670457 2987666974 Bacteria 6509233
199 3000138275 3000135777 Bacteria 6891109
200 3004193703 3004188549 Bacteria 6952365
201 3004271010 3004268573 Bacteria 7043476
202 8002291289 8002285264 Bacteria 6717907
203 8004381185 8004374579 Bacteria 6898112
204 8004396275 8004395343 Bacteria 6620908
205 8055620002 8055617313 Bacteria 7548464
206 Ga0207647_10124147
207 rootL2_10339009
208 Ga0055542_1001693
209 Ga0055529_1002931
210 Ga0070665_100005795
211 Ga0070665_100036668
212 Ga0068852_100524596
213 Ga0075365_10004901
214 Ga0075365_10018128
215 Ga0105240_10232713
216 Ga0105241_10107215
217 Ga0105237_10086292
218 Ga0105239_10020245
219 Ga0105239_10290865
220 Ga0105239_10310053
221 Ga0157374_10055022
222 Ga0163163_10190753
223 Ga0182006_1083774
224 Ga0182007_10035532
225 Ga0209148_1000570
226 Ga0209455_1000583
227 Ga0207688_10096910
228 Ga0207695_10178848
229 Ga0207428_10422560
230 Ga0268266_10088011
231 Ga0316579_10175283
232 Ga0316577_10112571
233 Ga0307409_100686473
234 Ga0307414_10447027
235 Ga0316583_10027406
236 Ga0316585_10034965
237 Ga0395899_0057275
238 Ga0395900_0023424
239 Ga0395898_0113740
240 Ga0395901_0074111
241 Ga0395901_0215817
242 Ga0451853_1607505
243 Ga0495638_0008256
244 Ga0496112_0241669
245 Ga0496119_0008144
246 Ga0496120_0003224
247 Ga0496124_0226589
248 Ga0501031_0000010
249 Ga0501031_0060978
250 Ga0501031_0089384
251 Ga0501032_0000023
252 Ga0501032_0004356
253 Ga0501032_0129671
254 Ga0501033_0000104
255 Ga0501033_0000481
256 Ga0501033_0003148
257 Ga0501033_0009997
258 Ga0501033_0075348
259 Ga0501033_0110328
260 Ga0501033_0122595
261 Ga0501033_0201677
262 Ga0501034_0000116
263 Ga0501034_0001737
264 Ga0501034_0027516
265 Ga0501034_0037408
266 Ga0501034_0258286
267 Ga0501034_0379965
268 Ga0501036_0000015
269 Ga0501036_0066133
270 Ga0501036_0192746
271 Ga0501036_0307168
272 Ga0501036_0526997
273 Ga0501036_0566979
274 Ga0501037_0000023
275 Ga0501037_0105923
276 Ga0501037_0215413
277 Ga0501038_0000025
278 Ga0501038_0016965
279 Ga0501038_0034014
280 Ga0501038_0179985
281 Ga0501039_0000691
282 Ga0501039_0035425
283 Ga0501040_0042577
284 Ga0501043_0000070
285 Ga0501043_0008235
286 Ga0501043_0032419
287 Ga0501043_0034979
288 Ga0501043_0174050
289 Ga0501043_0300976
290 Ga0501046_0132918
291 Ga0501047_0001811
292 Ga0501047_0005596
293 Ga0501047_0031757
294 Ga0501047_0084663
295 Ga0501068_0298728
296 Ga0501069_0014665
297 Ga0501069_0077778
298 Ga0501070_0001438
299 Ga0501070_0015970
300 Ga0501070_0018099
301 Ga0501070_0104570
302 Ga0501070_0221415
303 Ga0501073_0023442
304 Ga0501074_0019596
305 Ga0501080_0039746
306 Ga0501080_0477839
307 Ga0501083_0339246
308 Ga0501035_0000516
309 Ga0501035_0001099
310 Ga0501035_0001454
311 Ga0501035_0008387
312 Ga0501035_0026988
313 Ga0501035_0055954
314 Ga0501035_0146252
315 Ga0501035_0224838
316 Ga0501035_0355747
317 Ga0501044_0000069
318 Ga0501044_0000505
319 Ga0501044_0016573
320 Ga0501044_0021759
321 Ga0501044_0057509
322 Ga0501044_0178362
323 Ga0501045_0070806
324 nmdc:mga0yw44_3708_c1
325 nmdc:mga06z11_112696_c1
326 nmdc:mga06z11_136997_c1
327 nmdc:mga06z11_15289_c1
328 nmdc:mga0sz30_2246_c2
329 Ga0500620_000177
330 Ga0501082_0169176
331 Ga0501082_0459841
332 2514418011
333 2514591960
334 2514592031
335 2514592501
336 2588516513
337 2643772654
338 2643837915
339 2643988149
340 2644132319
341 2644155107
342 2723578427
343 2739308488
344 2756677911
345 2765467635
346 2839996753
347 2842339746
348 2844004891
349 2854914669
350 2856345045
351 2856362286
352 2857368324
353 2869162952
354 2871467251
355 2871492303
356 2871501035
357 2874125513
358 2876385509
359 2878759683
360 2878765059
361 2878772221
362 2882918809
363 2885322214
364 2888340282
365 2888352039
366 2889014024
367 2889021267
368 2903496966
369 2903545850
370 2906355699
371 2906381907
372 2917558715
373 2922130540
374 2922191616
375 2924734175
376 2924768779
377 2936997917
378 2937897437
379 2937999701
380 2938017170
381 2958106344
382 2958170171
383 2958175856
384 2961168624
385 2961173624
386 2965023444
387 2965123377
388 2968005781
389 2968177035
390 2970489967
391 2970506216
392 2970530260
393 2970540943
394 2970559906
395 2977828205
396 2977834669
397 2977973125
398 2977992634
399 2979711311
400 2979745217
401 2979810938
402 2987664652
403 2987670457
404 3000138275
405 3004193703
406 3004271010
407 8002291289
408 8004381185
409 8004396275
410 8055620002

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00582

Usp

Universal stress protein family

207

330

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ab7-assembly2.cif.gz_A crystal structure of the hypothetical tandem-type universal stress protein ttha0350 from thermus thermophilus hb8 0.7906 3 278
3ab7-assembly3.cif.gz_B crystal structure of the hypothetical tandem-type universal stress protein ttha0350 from thermus thermophilus hb8 0.7905 1 278
3ab7-assembly2.cif.gz_A crystal structure of the hypothetical tandem-type universal stress protein ttha0350 from thermus thermophilus hb8 0.7876 3 278
3ab7-assembly3.cif.gz_B crystal structure of the hypothetical tandem-type universal stress protein ttha0350 from thermus thermophilus hb8 0.7875 1 278
3ab8-assembly1.cif.gz_B crystal structure of the hypothetical tandem-type universal stress protein ttha0350 complexed with atps. 0.7857 3 278
ID Description Score Start End Superfamily
af_Q54L57_1_123_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8079 157 278 3.40.50.620
af_Q54L57_1_123_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.7961 157 278 3.40.50.620
3ab8B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.7857 3 278 3.40.50.12370
3ab8B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.783 3 278 3.40.50.12370
3loqB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.7688 155 277 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A531KMZ9-F1-model_v4 Universal stress protein 0.9867 35 250
AF-A0A531KMZ9-F1-model_v4 Universal stress protein 0.9822 35 250
AF-A0A530QGA0-F1-model_v4 Universal stress protein 0.9727 73 180
AF-A0A2T4IMX2-F1-model_v4 Universal stress protein 0.9636 1 278
AF-A0A5E8XGK1-F1-model_v4 deleted 0.9607 1 200

Map