F313661
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 205 | 143 | 205 | 340 |
Family's Representative Sequence
| Representative Sequence | 3300006163|Ga0070715_10000035|Ga0070715_1000003529 |
| Length | 382 |
| Sequence | LIGARHLACGTQASRLRLFSLTTPEGQSINRVVVRGTNWVGDAVMTIPALRSLRRLFPNAHLTLVSKPGAADIFIDADFVDEVLAYDRAGLRSMWAQTRDWRSRKFDLAILFQNAFEAAAMAFLARVPIRVGYDTERRGFLLTHSLASPSWKDERHEMFYYLNIVAEVERLFSGRPSVAIEEPQFALAVSASRQAEAVTLLRQHGSRGEGPLVILCPGSINSRAKRWPPERYAQLADRLIESGFAVALIGSPGEVDVSQQVLQNMRRQPTILTGKTTVAEAAAIINIADLLITNDTGPAHIGAAVSTPTLVIFGPTNPLTTRPFGTVGEIIREPPDCAPCMLRDCPIDHRCMTAITPEAVFERASALISSRLKAGLRTESIA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 2 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 3 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 4 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 6 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 14 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 15 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 16 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 20 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 21 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 25 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 27 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 29 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 30 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 31 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 32 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 33 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 34 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 35 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 36 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 37 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 38 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 39 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 40 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 41 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 42 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 44 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 65 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 66 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 94 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 96 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 97 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 98 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 99 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 100 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 101 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 102 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 103 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 104 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 105 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 106 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 107 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 108 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 109 | 3300038996 | Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 | Metagenome | Rhizosphere |
| 110 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 111 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 112 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 113 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 114 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 115 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 130 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 131 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 132 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 133 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 134 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300049652 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought | Metagenome | Rhizosphere |
| 136 | 3300049661 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control | Metagenome | Rhizosphere |
| 137 | 3300049688 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought | Metagenome | Rhizosphere |
| 138 | 3300049769 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought | Metagenome | Rhizosphere |
| 139 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 140 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 141 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 142 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 143 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.49 |
| Nodule | 0 |
| Rhizoplane | 0.98 |
| Rhizosphere | 91.22 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 7.32 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10003988 | 3300003203 | Bacteria | 6906 |
| 2 | Ga0065712_10004305 | 3300005290 | Bacteria | 4676 |
| 3 | Ga0065715_10125617 | 3300005293 | Bacteria | 2123 |
| 4 | Ga0070670_100005953 | 3300005331 | Bacteria | 10315 |
| 5 | Ga0070670_100027069 | 3300005331 | Bacteria | 4931 |
| 6 | Ga0070680_100037165 | 3300005336 | Unclassified | 3935 |
| 7 | Ga0070661_100312387 | 3300005344 | Unclassified | 1226 |
| 8 | Ga0070671_100016146 | 3300005355 | Bacteria | 6037 |
| 9 | Ga0070671_100160928 | 3300005355 | Unclassified | 1898 |
| 10 | Ga0070714_100105785 | 3300005435 | Bacteria | 2485 |
| 11 | Ga0070701_10063757 | 3300005438 | Bacteria | 1951 |
| 12 | Ga0070700_100019123 | 3300005441 | Unclassified | 3949 |
| 13 | Ga0070700_100026040 | 3300005441 | Unclassified | 3450 |
| 14 | Ga0070694_100010391 | 3300005444 | Bacteria | 5742 |
| 15 | Ga0070694_100160263 | 3300005444 | Unclassified | 1650 |
| 16 | Ga0070662_100069016 | 3300005457 | Unclassified | 2600 |
| 17 | Ga0070681_10002713 | 3300005458 | Bacteria | 16297 |
| 18 | Ga0070681_10088948 | 3300005458 | Bacteria | 3040 |
| 19 | Ga0068867_100081216 | 3300005459 | Bacteria | 2444 |
| 20 | Ga0070706_100004944 | 3300005467 | Bacteria | 12759 |
| 21 | Ga0070707_100001100 | 3300005468 | Bacteria | 26688 |
| 22 | Ga0070707_100006719 | 3300005468 | Bacteria | 10660 |
| 23 | Ga0070707_100022030 | 3300005468 | Bacteria | 6024 |
| 24 | Ga0070707_100088658 | 3300005468 | Bacteria | 2993 |
| 25 | Ga0070707_100281443 | 3300005468 | Bacteria | 1616 |
| 26 | Ga0070698_100044072 | 3300005471 | Unclassified | 4570 |
| 27 | Ga0070698_100065836 | 3300005471 | Bacteria | 3648 |
| 28 | Ga0070698_100293869 | 3300005471 | Unclassified | 1556 |
| 29 | Ga0070699_100043447 | 3300005518 | Unclassified | 3890 |
| 30 | Ga0070699_100045960 | 3300005518 | Bacteria | 3778 |
| 31 | Ga0070699_100077164 | 3300005518 | Bacteria | 2900 |
| 32 | Ga0070679_100022022 | 3300005530 | Bacteria | 6226 |
| 33 | Ga0068853_100017271 | 3300005539 | Bacteria | 5956 |
| 34 | Ga0070672_100235697 | 3300005543 | Bacteria | 1538 |
| 35 | Ga0070672_100285789 | 3300005543 | Bacteria | 1396 |
| 36 | Ga0070696_100024885 | 3300005546 | Bacteria | 4068 |
| 37 | Ga0070704_100121015 | 3300005549 | Unclassified | 2011 |
| 38 | Ga0068855_100036293 | 3300005563 | Bacteria | 5868 |
| 39 | Ga0070664_100038211 | 3300005564 | Bacteria | 4040 |
| 40 | Ga0068857_100001840 | 3300005577 | Bacteria | 17071 |
| 41 | Ga0068857_100042439 | 3300005577 | Unclassified | 4035 |
| 42 | Ga0068857_100242745 | 3300005577 | Bacteria | 1650 |
| 43 | Ga0070702_100034780 | 3300005615 | Bacteria | 2779 |
| 44 | Ga0068859_100017047 | 3300005617 | Bacteria | 7293 |
| 45 | Ga0068859_100021355 | 3300005617 | Bacteria | 6496 |
| 46 | Ga0068859_100111406 | 3300005617 | Bacteria | 2800 |
| 47 | Ga0068859_100186953 | 3300005617 | Bacteria | 2155 |
| 48 | Ga0068870_10050373 | 3300005840 | Bacteria | 2200 |
| 49 | Ga0068863_100073098 | 3300005841 | Bacteria | 3244 |
| 50 | Ga0068860_100492974 | 3300005843 | Bacteria | 1222 |
| 51 | Ga0068862_100059417 | 3300005844 | Bacteria | 3283 |
| 52 | Ga0081539_10003677 | 3300005985 | Bacteria | 18372 |
| 53 | Ga0070715_10000035 | 3300006163 | Bacteria | 78855 |
| 54 | Ga0070716_100141938 | 3300006173 | Unclassified | 1533 |
| 55 | Ga0075430_100085124 | 3300006846 | Bacteria | 2647 |
| 56 | Ga0075431_100011010 | 3300006847 | Bacteria | 9105 |
| 57 | Ga0075431_100011643 | 3300006847 | Bacteria | 8872 |
| 58 | Ga0075433_10008155 | 3300006852 | Bacteria | 8341 |
| 59 | Ga0075434_100004599 | 3300006871 | Bacteria | 12462 |
| 60 | Ga0075434_100346620 | 3300006871 | Unclassified | 1506 |
| 61 | Ga0075429_100002959 | 3300006880 | Bacteria | 14414 |
| 62 | Ga0068865_100138176 | 3300006881 | Bacteria | 1834 |
| 63 | Ga0097620_100017048 | 3300006931 | Bacteria | 7293 |
| 64 | Ga0097620_100021357 | 3300006931 | Bacteria | 6496 |
| 65 | Ga0097620_100111405 | 3300006931 | Bacteria | 2800 |
| 66 | Ga0097620_100186955 | 3300006931 | Bacteria | 2155 |
| 67 | Ga0099794_10004777 | 3300007265 | Bacteria | 5373 |
| 68 | Ga0111539_10007271 | 3300009094 | Bacteria | 14177 |
| 69 | Ga0111539_10458271 | 3300009094 | Unclassified | 1485 |
| 70 | Ga0105245_10052170 | 3300009098 | Viruses | 3668 |
| 71 | Ga0105247_10002410 | 3300009101 | Bacteria | 12715 |
| 72 | Ga0114129_10085264 | 3300009147 | Unclassified | 4382 |
| 73 | Ga0105243_10071600 | 3300009148 | Bacteria | 2804 |
| 74 | Ga0105243_10115957 | 3300009148 | Bacteria | 2249 |
| 75 | Ga0105241_10068407 | 3300009174 | Bacteria | 2751 |
| 76 | Ga0105241_10081135 | 3300009174 | Bacteria | 2540 |
| 77 | Ga0105241_10200031 | 3300009174 | Bacteria | 1668 |
| 78 | Ga0105237_10245913 | 3300009545 | Bacteria | 1790 |
| 79 | Ga0105237_10345106 | 3300009545 | Bacteria | 1493 |
| 80 | Ga0105249_10140388 | 3300009553 | Unclassified | 2316 |
| 81 | Ga0105239_10454687 | 3300010375 | Unclassified | 1453 |
| 82 | Ga0105246_10040547 | 3300011119 | Unclassified | 3143 |
| 83 | Ga0157373_10003543 | 3300013100 | Bacteria | 11791 |
| 84 | Ga0157369_10289896 | 3300013105 | Unclassified | 1704 |
| 85 | Ga0157374_10149148 | 3300013296 | Unclassified | 2273 |
| 86 | Ga0157378_10001915 | 3300013297 | Bacteria | 18685 |
| 87 | Ga0163162_10586388 | 3300013306 | Unclassified | 1242 |
| 88 | Ga0157372_10012686 | 3300013307 | Bacteria | 8978 |
| 89 | Ga0163163_10195325 | 3300014325 | Bacteria | 2072 |
| 90 | Ga0157380_10053061 | 3300014326 | Bacteria | 3213 |
| 91 | Ga0157380_10088707 | 3300014326 | Unclassified | 2546 |
| 92 | Ga0157380_10196272 | 3300014326 | Bacteria | 1787 |
| 93 | Ga0157377_10150394 | 3300014745 | Bacteria | 1439 |
| 94 | Ga0163161_10000373 | 3300017792 | Bacteria | 37505 |
| 95 | Ga0213876_10001828 | 3300021384 | Bacteria | 12841 |
| 96 | Ga0213876_10018247 | 3300021384 | Bacteria | 3703 |
| 97 | Ga0213876_10019293 | 3300021384 | Bacteria | 3602 |
| 98 | Ga0213875_10000032 | 3300021388 | Bacteria | 172918 |
| 99 | Ga0213875_10091257 | 3300021388 | Bacteria | 1421 |
| 100 | Ga0207710_10002887 | 3300025900 | Bacteria | 7812 |
| 101 | Ga0207685_10000019 | 3300025905 | Bacteria | 145568 |
| 102 | Ga0207645_10156601 | 3300025907 | Unclassified | 1488 |
| 103 | Ga0207643_10033191 | 3300025908 | Unclassified | 2888 |
| 104 | Ga0207684_10021743 | 3300025910 | Bacteria | 5477 |
| 105 | Ga0207684_10069414 | 3300025910 | Unclassified | 2995 |
| 106 | Ga0207684_10239117 | 3300025910 | Unclassified | 1567 |
| 107 | Ga0207654_10051233 | 3300025911 | Bacteria | 2375 |
| 108 | Ga0207654_10173933 | 3300025911 | Bacteria | 1400 |
| 109 | Ga0207660_10026651 | 3300025917 | Unclassified | 3937 |
| 110 | Ga0207652_10015656 | 3300025921 | Bacteria | 6173 |
| 111 | Ga0207646_10001701 | 3300025922 | Bacteria | 26745 |
| 112 | Ga0207646_10003709 | 3300025922 | Bacteria | 17042 |
| 113 | Ga0207646_10104161 | 3300025922 | Bacteria | 2545 |
| 114 | Ga0207681_10006079 | 3300025923 | Bacteria | 7404 |
| 115 | Ga0207650_10006458 | 3300025925 | Bacteria | 7984 |
| 116 | Ga0207644_10022284 | 3300025931 | Unclassified | 4326 |
| 117 | Ga0207706_10044779 | 3300025933 | Unclassified | 3921 |
| 118 | Ga0207706_10121271 | 3300025933 | Bacteria | 2299 |
| 119 | Ga0207706_10263397 | 3300025933 | Unclassified | 1505 |
| 120 | Ga0207691_10067039 | 3300025940 | Bacteria | 3246 |
| 121 | Ga0207691_10138097 | 3300025940 | Unclassified | 2149 |
| 122 | Ga0207689_10036034 | 3300025942 | Bacteria | 4108 |
| 123 | Ga0207667_10198535 | 3300025949 | Bacteria | 2058 |
| 124 | Ga0207712_10029693 | 3300025961 | Bacteria | 3670 |
| 125 | Ga0207712_10032895 | 3300025961 | Unclassified | 3502 |
| 126 | Ga0207640_10236746 | 3300025981 | Bacteria | 1408 |
| 127 | Ga0207703_10050492 | 3300026035 | Bacteria | 3367 |
| 128 | Ga0207703_10059257 | 3300026035 | Bacteria | 3127 |
| 129 | Ga0207703_10386409 | 3300026035 | Bacteria | 1296 |
| 130 | Ga0207639_10006546 | 3300026041 | Bacteria | 7923 |
| 131 | Ga0207639_10028862 | 3300026041 | Bacteria | 4055 |
| 132 | Ga0207639_10064790 | 3300026041 | Bacteria | 2834 |
| 133 | Ga0207708_10037164 | 3300026075 | Unclassified | 3709 |
| 134 | Ga0207641_10106651 | 3300026088 | Bacteria | 2477 |
| 135 | Ga0207641_10241726 | 3300026088 | Bacteria | 1683 |
| 136 | Ga0207676_10085627 | 3300026095 | Bacteria | 2573 |
| 137 | Ga0207676_10145003 | 3300026095 | Bacteria | 2038 |
| 138 | Ga0207674_10004231 | 3300026116 | Bacteria | 17315 |
| 139 | Ga0207674_10235752 | 3300026116 | Bacteria | 1777 |
| 140 | Ga0207675_100295364 | 3300026118 | Bacteria | 1577 |
| 141 | Ga0207683_10067082 | 3300026121 | Bacteria | 3165 |
| 142 | Ga0209588_1005394 | 3300027671 | Bacteria | 3665 |
| 143 | Ga0207428_10130500 | 3300027907 | Bacteria | 1923 |
| 144 | Ga0268264_10294696 | 3300028381 | Bacteria | 1525 |
| 145 | Ga0268264_10369270 | 3300028381 | Bacteria | 1371 |
| 146 | Ga0265332_10084961 | 3300031238 | Unclassified | 1341 |
| 147 | Ga0265320_10007322 | 3300031240 | Bacteria | 6854 |
| 148 | Ga0265325_10016119 | 3300031241 | Bacteria | 4181 |
| 149 | Ga0265331_10000983 | 3300031250 | Bacteria | 22468 |
| 150 | Ga0265316_10008252 | 3300031344 | Bacteria | 9685 |
| 151 | Ga0307405_10125922 | 3300031731 | Bacteria | 1761 |
| 152 | Ga0373942_0005190 | 3300035207 | Bacteria | 3016 |
| 153 | Ga0373927_0000870 | 3300035695 | Bacteria | 23023 |
| 154 | Ga0316582_0025565 | 3300036647 | Bacteria | 3547 |
| 155 | Ga0395900_0202324 | 3300037418 | Unclassified | 2009 |
| 156 | Ga0395898_0085623 | 3300037466 | Unclassified | 3038 |
| 157 | Ga0395905_0030363 | 3300037471 | Bacteria | 5093 |
| 158 | Ga0436364_0093357 | 3300037853 | Bacteria | 3710 |
| 159 | Ga0436364_0573655 | 3300037853 | Bacteria | 6672 |
| 160 | Ga0436364_1105375 | 3300037853 | Bacteria | 139847 |
| 161 | Ga0436364_1507748 | 3300037853 | Unclassified | 2086 |
| 162 | Ga0395901_0182875 | 3300038443 | Unclassified | 2199 |
| 163 | Ga0242420_001220 | 3300038996 | Bacteria | 3365 |
| 164 | Ga0436365_0141648 | 3300039437 | Bacteria | 1252 |
| 165 | Ga0436365_0678686 | 3300039437 | Bacteria | 2156 |
| 166 | Ga0436365_0678688 | 3300039437 | Bacteria | 16402 |
| 167 | Ga0436363_0403998 | 3300039450 | Bacteria | 5742 |
| 168 | Ga0436363_1406448 | 3300039450 | Unclassified | 2794 |
| 169 | Ga0436362_0610013 | 3300039453 | Bacteria | 2586 |
| 170 | Ga0439448_0052107 | 3300042005 | Bacteria | 1341 |
| 171 | Ga0453684_0000502 | 3300044712 | Bacteria | 153452 |
| 172 | Ga0495592_0024268 | 3300046454 | Bacteria | 4610 |
| 173 | Ga0495653_0030492 | 3300046463 | Unclassified | 4294 |
| 174 | Ga0495580_0051035 | 3300046472 | Bacteria | 2924 |
| 175 | Ga0495628_0022331 | 3300046516 | Bacteria | 5198 |
| 176 | Ga0495630_0030539 | 3300046517 | Unclassified | 4009 |
| 177 | Ga0495630_0131948 | 3300046517 | Unclassified | 1897 |
| 178 | Ga0495630_0182918 | 3300046517 | Bacteria | 1598 |
| 179 | Ga0495622_0041889 | 3300046557 | Unclassified | 2130 |
| 180 | Ga0495657_0174880 | 3300046675 | Bacteria | 1320 |
| 181 | Ga0495623_0025021 | 3300046679 | Bacteria | 3846 |
| 182 | Ga0495604_0034818 | 3300047317 | Bacteria | 3982 |
| 183 | Ga0495674_0047331 | 3300047319 | Bacteria | 3814 |
| 184 | Ga0495674_0284716 | 3300047319 | Bacteria | 1353 |
| 185 | Ga0495680_0016385 | 3300047322 | Bacteria | 6371 |
| 186 | Ga0495675_0023216 | 3300047444 | Bacteria | 3953 |
| 187 | Ga0495675_0168553 | 3300047444 | Unclassified | 1346 |
| 188 | Ga0495684_0002518 | 3300047471 | Bacteria | 14601 |
| 189 | Ga0495602_0033533 | 3300048088 | Bacteria | 4816 |
| 190 | Ga0496104_0054243 | 3300048907 | Bacteria | 3789 |
| 191 | Ga0496106_0056376 | 3300048909 | Bacteria | 2970 |
| 192 | Ga0496126_0243943 | 3300048929 | Bacteria | 1500 |
| 193 | Ga0501036_0052171 | 3300049572 | Unclassified | 3464 |
| 194 | Ga0501048_0038429 | 3300049582 | Unclassified | 3434 |
| 195 | Ga0501076_0041854 | 3300049592 | Unclassified | 3606 |
| 196 | Ga0501202_013970 | 3300049652 | Unclassified | 1533 |
| 197 | Ga0501217_016380 | 3300049661 | Bacteria | 1698 |
| 198 | Ga0501259_023395 | 3300049688 | Bacteria | 1118 |
| 199 | Ga0501272_004744 | 3300049769 | Bacteria | 1419 |
| 200 | nmdc:mga09592_104984_c1 | 3300050508 | Unclassified | 2422 |
| 201 | nmdc:mga08y16_265331_c1 | 3300050511 | Bacteria | 1773 |
| 202 | nmdc:mga0a205_196200_c1 | 3300050515 | Unclassified | 1910 |
| 203 | nmdc:mga0a205_2078_c1 | 3300050515 | Bacteria | 17510 |
| 204 | Ga0500577_0000555 | 3300053142 | Bacteria | 9620 |
| 205 | Ga0530510_0140046 | 3300061734 | Bacteria | 1782 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300036647 | Ga0316582_0025565 | Ga0316582_0025565_2279_3253 | 280 |
| 2 | 3300006881 | Ga0068865_100138176 | Ga0068865_1001381762 | 285 |
| 3 | 3300026118 | Ga0207675_100295364 | Ga0207675_1002953642 | 285 |
| 4 | 3300046472 | Ga0495580_0051035 | Ga0495580_0051035_1253_2257 | 288 |
| 5 | 3300021384 | Ga0213876_10001828 | Ga0213876_100018286 | 289 |
| 6 | 3300039437 | Ga0436365_0678688 | Ga0436365_0678688_11545_12540 | 289 |
| 7 | 3300039450 | Ga0436363_1406448 | Ga0436363_1406448_30_1025 | 289 |
| 8 | 3300048929 | Ga0496126_0243943 | Ga0496126_0243943_21_1019 | 289 |
| 9 | 3300005435 | Ga0070714_100105785 | Ga0070714_1001057852 | 290 |
| 10 | 3300005577 | Ga0068857_100242745 | Ga0068857_1002427451 | 296 |
| 11 | 3300026116 | Ga0207674_10235752 | Ga0207674_102357521 | 296 |
| 12 | 3300005444 | Ga0070694_100010391 | Ga0070694_1000103916 | 298 |
| 13 | 3300005617 | Ga0068859_100017047 | Ga0068859_1000170477 | 298 |
| 14 | 3300006931 | Ga0097620_100017048 | Ga0097620_1000170487 | 298 |
| 15 | 3300005468 | Ga0070707_100281443 | Ga0070707_1002814432 | 300 |
| 16 | 3300025910 | Ga0207684_10069414 | Ga0207684_100694142 | 300 |
| 17 | 3300025910 | Ga0207684_10239117 | Ga0207684_102391171 | 301 |
| 18 | 3300005543 | Ga0070672_100235697 | Ga0070672_1002356972 | 303 |
| 19 | 3300013105 | Ga0157369_10289896 | Ga0157369_102898962 | 303 |
| 20 | 3300021388 | Ga0213875_10000032 | Ga0213875_10000032154 | 303 |
| 21 | 3300037853 | Ga0436364_1105375 | Ga0436364_1105375_66071_67111 | 303 |
| 22 | 3300049688 | Ga0501259_023395 | Ga0501259_023395_24_1049 | 303 |
| 23 | 3300005468 | Ga0070707_100088658 | Ga0070707_1000886583 | 304 |
| 24 | 3300021384 | Ga0213876_10019293 | Ga0213876_100192933 | 305 |
| 25 | 3300039450 | Ga0436363_0403998 | Ga0436363_0403998_1454_2497 | 305 |
| 26 | 3300031240 | Ga0265320_10007322 | Ga0265320_100073222 | 306 |
| 27 | 3300037466 | Ga0395898_0085623 | Ga0395898_0085623_745_1770 | 306 |
| 28 | 3300005467 | Ga0070706_100004944 | Ga0070706_1000049445 | 307 |
| 29 | 3300005468 | Ga0070707_100001100 | Ga0070707_1000011004 | 307 |
| 30 | 3300014326 | Ga0157380_10088707 | Ga0157380_100887073 | 307 |
| 31 | 3300017792 | Ga0163161_10000373 | Ga0163161_1000037319 | 307 |
| 32 | 3300021384 | Ga0213876_10018247 | Ga0213876_100182473 | 307 |
| 33 | 3300025922 | Ga0207646_10001701 | Ga0207646_100017014 | 307 |
| 34 | 3300026121 | Ga0207683_10067082 | Ga0207683_100670823 | 307 |
| 35 | 3300035695 | Ga0373927_0000870 | Ga0373927_0000870_16883_17947 | 307 |
| 36 | 3300037853 | Ga0436364_0093357 | Ga0436364_0093357_781_1830 | 307 |
| 37 | 3300037853 | Ga0436364_1507748 | Ga0436364_1507748_52_1101 | 307 |
| 38 | 3300039437 | Ga0436365_0678686 | Ga0436365_0678686_447_1496 | 307 |
| 39 | 3300039453 | Ga0436362_0610013 | Ga0436362_0610013_1175_2224 | 307 |
| 40 | 3300005458 | Ga0070681_10002713 | Ga0070681_100027139 | 308 |
| 41 | 3300005530 | Ga0070679_100022022 | Ga0070679_1000220223 | 308 |
| 42 | 3300005563 | Ga0068855_100036293 | Ga0068855_1000362933 | 308 |
| 43 | 3300025949 | Ga0207667_10198535 | Ga0207667_101985352 | 308 |
| 44 | 3300025981 | Ga0207640_10236746 | Ga0207640_102367461 | 308 |
| 45 | 3300049652 | Ga0501202_013970 | Ga0501202_013970_486_1511 | 308 |
| 46 | 3300049769 | Ga0501272_004744 | Ga0501272_004744_23_1048 | 308 |
| 47 | 3300061734 | Ga0530510_0140046 | Ga0530510_0140046_592_1659 | 308 |
| 48 | 3300009094 | Ga0111539_10458271 | Ga0111539_104582712 | 309 |
| 49 | 3300014326 | Ga0157380_10196272 | Ga0157380_101962722 | 309 |
| 50 | 3300025933 | Ga0207706_10121271 | Ga0207706_101212712 | 309 |
| 51 | 3300025933 | Ga0207706_10263397 | Ga0207706_102633972 | 309 |
| 52 | 3300005331 | Ga0070670_100005953 | Ga0070670_1000059536 | 310 |
| 53 | 3300005331 | Ga0070670_100027069 | Ga0070670_1000270693 | 310 |
| 54 | 3300005355 | Ga0070671_100160928 | Ga0070671_1001609283 | 310 |
| 55 | 3300005543 | Ga0070672_100285789 | Ga0070672_1002857892 | 310 |
| 56 | 3300025907 | Ga0207645_10156601 | Ga0207645_101566012 | 310 |
| 57 | 3300025925 | Ga0207650_10006458 | Ga0207650_100064583 | 310 |
| 58 | 3300025940 | Ga0207691_10067039 | Ga0207691_100670394 | 310 |
| 59 | 3300026095 | Ga0207676_10145003 | Ga0207676_101450032 | 310 |
| 60 | 3300021388 | Ga0213875_10091257 | Ga0213875_100912571 | 311 |
| 61 | 3300037853 | Ga0436364_0573655 | Ga0436364_0573655_3422_4486 | 311 |
| 62 | 3300044712 | Ga0453684_0000502 | Ga0453684_0000502_10231_11295 | 312 |
| 63 | 3300009098 | Ga0105245_10052170 | Ga0105245_100521705 | 313 |
| 64 | 3300013296 | Ga0157374_10149148 | Ga0157374_101491483 | 313 |
| 65 | 3300013297 | Ga0157378_10001915 | Ga0157378_1000191516 | 313 |
| 66 | 3300031238 | Ga0265332_10084961 | Ga0265332_100849612 | 313 |
| 67 | 3300031250 | Ga0265331_10000983 | Ga0265331_100009832 | 313 |
| 68 | 3300031344 | Ga0265316_10008252 | Ga0265316_100082526 | 313 |
| 69 | 3300046454 | Ga0495592_0024268 | Ga0495592_0024268_1886_2950 | 313 |
| 70 | 3300046463 | Ga0495653_0030492 | Ga0495653_0030492_2496_3560 | 313 |
| 71 | 3300046516 | Ga0495628_0022331 | Ga0495628_0022331_2181_3245 | 313 |
| 72 | 3300046517 | Ga0495630_0030539 | Ga0495630_0030539_585_1649 | 313 |
| 73 | 3300046517 | Ga0495630_0131948 | Ga0495630_0131948_807_1871 | 313 |
| 74 | 3300046557 | Ga0495622_0041889 | Ga0495622_0041889_837_1901 | 313 |
| 75 | 3300046675 | Ga0495657_0174880 | Ga0495657_0174880_231_1295 | 313 |
| 76 | 3300046679 | Ga0495623_0025021 | Ga0495623_0025021_2332_3396 | 313 |
| 77 | 3300047317 | Ga0495604_0034818 | Ga0495604_0034818_1122_2186 | 313 |
| 78 | 3300047319 | Ga0495674_0047331 | Ga0495674_0047331_106_1170 | 313 |
| 79 | 3300047319 | Ga0495674_0284716 | Ga0495674_0284716_113_1177 | 313 |
| 80 | 3300047322 | Ga0495680_0016385 | Ga0495680_0016385_2869_3933 | 313 |
| 81 | 3300047444 | Ga0495675_0168553 | Ga0495675_0168553_252_1316 | 313 |
| 82 | 3300047471 | Ga0495684_0002518 | Ga0495684_0002518_8774_9838 | 313 |
| 83 | 3300048088 | Ga0495602_0033533 | Ga0495602_0033533_174_1238 | 313 |
| 84 | 3300046517 | Ga0495630_0182918 | Ga0495630_0182918_52_1119 | 314 |
| 85 | 3300047444 | Ga0495675_0023216 | Ga0495675_0023216_2663_3730 | 314 |
| 86 | 3300031241 | Ga0265325_10016119 | Ga0265325_100161192 | 315 |
| 87 | 3300049572 | Ga0501036_0052171 | Ga0501036_0052171_1360_2430 | 315 |
| 88 | 3300049582 | Ga0501048_0038429 | Ga0501048_0038429_1140_2210 | 315 |
| 89 | 3300049592 | Ga0501076_0041854 | Ga0501076_0041854_188_1258 | 315 |
| 90 | 3300005577 | Ga0068857_100001840 | Ga0068857_1000018406 | 316 |
| 91 | 3300026041 | Ga0207639_10028862 | Ga0207639_100288623 | 316 |
| 92 | 3300026116 | Ga0207674_10004231 | Ga0207674_1000423112 | 316 |
| 93 | 3300005344 | Ga0070661_100312387 | Ga0070661_1003123871 | 317 |
| 94 | 3300005539 | Ga0068853_100017271 | Ga0068853_1000172713 | 317 |
| 95 | 3300005564 | Ga0070664_100038211 | Ga0070664_1000382111 | 317 |
| 96 | 3300005577 | Ga0068857_100042439 | Ga0068857_1000424393 | 317 |
| 97 | 3300006847 | Ga0075431_100011010 | Ga0075431_1000110108 | 317 |
| 98 | 3300013307 | Ga0157372_10012686 | Ga0157372_100126863 | 317 |
| 99 | 3300025921 | Ga0207652_10015656 | Ga0207652_100156563 | 317 |
| 100 | 3300025933 | Ga0207706_10044779 | Ga0207706_100447792 | 317 |
| 101 | 3300026041 | Ga0207639_10006546 | Ga0207639_100065465 | 317 |
| 102 | 3300053142 | Ga0500577_0000555 | Ga0500577_0000555_3687_4754 | 317 |
| 103 | 3300039437 | Ga0436365_0141648 | Ga0436365_0141648_127_1194 | 318 |
| 104 | 3300006871 | Ga0075434_100004599 | Ga0075434_1000045999 | 320 |
| 105 | 3300009148 | Ga0105243_10071600 | Ga0105243_100716002 | 320 |
| 106 | 3300026095 | Ga0207676_10085627 | Ga0207676_100856273 | 321 |
| 107 | 3300005336 | Ga0070680_100037165 | Ga0070680_1000371653 | 322 |
| 108 | 3300005441 | Ga0070700_100019123 | Ga0070700_1000191232 | 322 |
| 109 | 3300005457 | Ga0070662_100069016 | Ga0070662_1000690163 | 322 |
| 110 | 3300005546 | Ga0070696_100024885 | Ga0070696_1000248856 | 322 |
| 111 | 3300005617 | Ga0068859_100021355 | Ga0068859_1000213555 | 322 |
| 112 | 3300005840 | Ga0068870_10050373 | Ga0068870_100503731 | 322 |
| 113 | 3300006931 | Ga0097620_100021357 | Ga0097620_1000213573 | 322 |
| 114 | 3300014326 | Ga0157380_10053061 | Ga0157380_100530614 | 322 |
| 115 | 3300025917 | Ga0207660_10026651 | Ga0207660_100266513 | 322 |
| 116 | 3300026075 | Ga0207708_10037164 | Ga0207708_100371642 | 322 |
| 117 | 3300005468 | Ga0070707_100006719 | Ga0070707_1000067198 | 323 |
| 118 | 3300005617 | Ga0068859_100111406 | Ga0068859_1001114062 | 323 |
| 119 | 3300006852 | Ga0075433_10008155 | Ga0075433_100081554 | 323 |
| 120 | 3300006931 | Ga0097620_100111405 | Ga0097620_1001114052 | 323 |
| 121 | 3300007265 | Ga0099794_10004777 | Ga0099794_100047772 | 323 |
| 122 | 3300014325 | Ga0163163_10195325 | Ga0163163_101953253 | 323 |
| 123 | 3300025910 | Ga0207684_10021743 | Ga0207684_100217434 | 323 |
| 124 | 3300025922 | Ga0207646_10003709 | Ga0207646_100037091 | 323 |
| 125 | 3300027671 | Ga0209588_1005394 | Ga0209588_10053942 | 323 |
| 126 | 3300050515 | nmdc:mga0a205_2078_c1 | nmdc:mga0a205_2078_c1_4342_5439 | 323 |
| 127 | 3300005290 | Ga0065712_10004305 | Ga0065712_100043053 | 324 |
| 128 | 3300005458 | Ga0070681_10088948 | Ga0070681_100889483 | 324 |
| 129 | 3300005471 | Ga0070698_100044072 | Ga0070698_1000440723 | 324 |
| 130 | 3300005518 | Ga0070699_100045960 | Ga0070699_1000459604 | 324 |
| 131 | 3300005615 | Ga0070702_100034780 | Ga0070702_1000347801 | 324 |
| 132 | 3300005617 | Ga0068859_100186953 | Ga0068859_1001869532 | 324 |
| 133 | 3300005841 | Ga0068863_100073098 | Ga0068863_1000730982 | 324 |
| 134 | 3300006871 | Ga0075434_100346620 | Ga0075434_1003466201 | 324 |
| 135 | 3300006931 | Ga0097620_100186955 | Ga0097620_1001869552 | 324 |
| 136 | 3300009101 | Ga0105247_10002410 | Ga0105247_1000241011 | 324 |
| 137 | 3300009174 | Ga0105241_10068407 | Ga0105241_100684073 | 324 |
| 138 | 3300009545 | Ga0105237_10245913 | Ga0105237_102459131 | 324 |
| 139 | 3300010375 | Ga0105239_10454687 | Ga0105239_104546872 | 324 |
| 140 | 3300013306 | Ga0163162_10586388 | Ga0163162_105863881 | 324 |
| 141 | 3300025900 | Ga0207710_10002887 | Ga0207710_100028872 | 324 |
| 142 | 3300026088 | Ga0207641_10106651 | Ga0207641_101066511 | 324 |
| 143 | 3300026088 | Ga0207641_10241726 | Ga0207641_102417262 | 324 |
| 144 | 3300042005 | Ga0439448_0052107 | Ga0439448_0052107_136_1221 | 324 |
| 145 | 3300050515 | nmdc:mga0a205_196200_c1 | nmdc:mga0a205_196200_c1_476_1573 | 324 |
| 146 | 3300005468 | Ga0070707_100022030 | Ga0070707_1000220304 | 325 |
| 147 | 3300005471 | Ga0070698_100065836 | Ga0070698_1000658362 | 325 |
| 148 | 3300005471 | Ga0070698_100293869 | Ga0070698_1002938692 | 325 |
| 149 | 3300009553 | Ga0105249_10140388 | Ga0105249_101403882 | 325 |
| 150 | 3300025961 | Ga0207712_10029693 | Ga0207712_100296935 | 325 |
| 151 | 3300037418 | Ga0395900_0202324 | Ga0395900_0202324_618_1721 | 325 |
| 152 | 3300037471 | Ga0395905_0030363 | Ga0395905_0030363_727_1830 | 325 |
| 153 | 3300038443 | Ga0395901_0182875 | Ga0395901_0182875_1060_2163 | 325 |
| 154 | 3300005518 | Ga0070699_100043447 | Ga0070699_1000434473 | 327 |
| 155 | 3300006163 | Ga0070715_10000035 | Ga0070715_1000003529 | 327 |
| 156 | 3300025905 | Ga0207685_10000019 | Ga0207685_1000001997 | 327 |
| 157 | 3300025922 | Ga0207646_10104161 | Ga0207646_101041612 | 327 |
| 158 | 3300006846 | Ga0075430_100085124 | Ga0075430_1000851243 | 328 |
| 159 | 3300006847 | Ga0075431_100011643 | Ga0075431_1000116433 | 328 |
| 160 | 3300006880 | Ga0075429_100002959 | Ga0075429_1000029592 | 328 |
| 161 | 3300009174 | Ga0105241_10200031 | Ga0105241_102000312 | 328 |
| 162 | 3300009545 | Ga0105237_10345106 | Ga0105237_103451062 | 328 |
| 163 | 3300025911 | Ga0207654_10173933 | Ga0207654_101739332 | 328 |
| 164 | 3300026041 | Ga0207639_10064790 | Ga0207639_100647903 | 328 |
| 165 | 3300048907 | Ga0496104_0054243 | Ga0496104_0054243_2297_3391 | 328 |
| 166 | 3300048909 | Ga0496106_0056376 | Ga0496106_0056376_583_1677 | 328 |
| 167 | 3300050508 | nmdc:mga09592_104984_c1 | nmdc:mga09592_104984_c1_566_1654 | 328 |
| 168 | 3300005844 | Ga0068862_100059417 | Ga0068862_1000594174 | 330 |
| 169 | 3300011119 | Ga0105246_10040547 | Ga0105246_100405471 | 330 |
| 170 | 3300013100 | Ga0157373_10003543 | Ga0157373_100035438 | 330 |
| 171 | 3300025908 | Ga0207643_10033191 | Ga0207643_100331913 | 330 |
| 172 | 3300025942 | Ga0207689_10036034 | Ga0207689_100360344 | 330 |
| 173 | 3300038996 | Ga0242420_001220 | Ga0242420_001220_1106_2200 | 330 |
| 174 | 3300003203 | JGI25406J46586_10003988 | JGI25406J46586_100039883 | 331 |
| 175 | 3300005293 | Ga0065715_10125617 | Ga0065715_101256173 | 331 |
| 176 | 3300005355 | Ga0070671_100016146 | Ga0070671_1000161463 | 331 |
| 177 | 3300005438 | Ga0070701_10063757 | Ga0070701_100637572 | 331 |
| 178 | 3300005441 | Ga0070700_100026040 | Ga0070700_1000260403 | 331 |
| 179 | 3300005444 | Ga0070694_100160263 | Ga0070694_1001602631 | 331 |
| 180 | 3300005459 | Ga0068867_100081216 | Ga0068867_1000812162 | 331 |
| 181 | 3300005518 | Ga0070699_100077164 | Ga0070699_1000771643 | 331 |
| 182 | 3300005549 | Ga0070704_100121015 | Ga0070704_1001210151 | 331 |
| 183 | 3300005843 | Ga0068860_100492974 | Ga0068860_1004929741 | 331 |
| 184 | 3300005985 | Ga0081539_10003677 | Ga0081539_1000367719 | 331 |
| 185 | 3300006173 | Ga0070716_100141938 | Ga0070716_1001419381 | 331 |
| 186 | 3300009094 | Ga0111539_10007271 | Ga0111539_1000727110 | 331 |
| 187 | 3300009147 | Ga0114129_10085264 | Ga0114129_100852646 | 331 |
| 188 | 3300009148 | Ga0105243_10115957 | Ga0105243_101159573 | 331 |
| 189 | 3300009174 | Ga0105241_10081135 | Ga0105241_100811353 | 331 |
| 190 | 3300014745 | Ga0157377_10150394 | Ga0157377_101503941 | 331 |
| 191 | 3300025911 | Ga0207654_10051233 | Ga0207654_100512331 | 331 |
| 192 | 3300025923 | Ga0207681_10006079 | Ga0207681_100060795 | 331 |
| 193 | 3300025931 | Ga0207644_10022284 | Ga0207644_100222846 | 331 |
| 194 | 3300025940 | Ga0207691_10138097 | Ga0207691_101380972 | 331 |
| 195 | 3300025961 | Ga0207712_10032895 | Ga0207712_100328954 | 331 |
| 196 | 3300026035 | Ga0207703_10050492 | Ga0207703_100504924 | 331 |
| 197 | 3300026035 | Ga0207703_10059257 | Ga0207703_100592572 | 331 |
| 198 | 3300026035 | Ga0207703_10386409 | Ga0207703_103864092 | 331 |
| 199 | 3300027907 | Ga0207428_10130500 | Ga0207428_101305002 | 331 |
| 200 | 3300028381 | Ga0268264_10294696 | Ga0268264_102946962 | 331 |
| 201 | 3300028381 | Ga0268264_10369270 | Ga0268264_103692702 | 331 |
| 202 | 3300031731 | Ga0307405_10125922 | Ga0307405_101259221 | 331 |
| 203 | 3300035207 | Ga0373942_0005190 | Ga0373942_0005190_448_1542 | 331 |
| 204 | 3300049661 | Ga0501217_016380 | Ga0501217_016380_129_1226 | 331 |
| 205 | 3300050511 | nmdc:mga08y16_265331_c1 | nmdc:mga08y16_265331_c1_49_1155 | 331 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3tov-assembly1.cif.gz_A | the crystal structure of the glycosyl transferase family 9 from veillonella parvula dsm 2008 | 0.8776 | 1 | 262 |
| 3tov-assembly2.cif.gz_B | the crystal structure of the glycosyl transferase family 9 from veillonella parvula dsm 2008 | 0.8379 | 1 | 316 |
| 1psw-assembly1.cif.gz_A | structure of e. coli adp-heptose lps heptosyltransferase ii | 0.8116 | 10 | 318 |
| 3tov-assembly2.cif.gz_B | the crystal structure of the glycosyl transferase family 9 from veillonella parvula dsm 2008 | 0.8001 | 1 | 316 |
| 6dfe-assembly1.cif.gz_A | the structure of a ternary complex of e. coli waac | 0.7726 | 10 | 263 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P25742_154_333_3.40.50.2000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.889 | 171 | 263 | 3.40.50.2000 |
| af_P37692_2_151_3.40.50.2000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.8699 | 11 | 144 | 3.40.50.2000 |
| af_P25742_1_146_3.40.50.2000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.864 | 16 | 147 | 3.40.50.2000 |
| 1pswA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.8217 | 11 | 144 | 3.40.50.2000 |
| 3tovB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.8172 | 3 | 165 | 3.40.50.2000 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7W1L1X3-F1-model_v4 | lipopolysaccharide heptosyltransferase II (EC 2.4.99.24) | 0.9696 | 1 | 263 |
GO:0005829
GO:0008713 GO:0009244 |
| AF-A0A3M0XDM3-F1-model_v4 | Lipopolysaccharide heptosyltransferase II | 0.9662 | 25 | 125 |
GO:0005829
GO:0008713 GO:0009244 |
| AF-A0A3M1HNN6-F1-model_v4 | Lipopolysaccharide heptosyltransferase II | 0.9601 | 6 | 115 |
GO:0005829
GO:0008713 GO:0009244 |
| AF-A0A7C2MCG0-F1-model_v4 | Lipopolysaccharide heptosyltransferase II | 0.9526 | 8 | 253 |
GO:0005829
GO:0008713 GO:0009244 |
| AF-A0A7V9NPF3-F1-model_v4 | lipopolysaccharide heptosyltransferase II (EC 2.4.99.24) | 0.9464 | 13 | 314 |
GO:0005829
GO:0008713 GO:0009244 |
Predicted Structure (AlphaFold2)
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