F313172

General Info

Members Datasets Scaffolds Average Seq Length
204 171 408 294

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2582581312|2585298634
Length 330
Sequence EASAPRAAPFGRALCAMITPFTADGELDLDSAGTHAAGLVADGCDGLVLSGTTGESPTTTDAEKTALLRAVREAVGDAVPLVAGVGSADTRHTIELARQAERAGADGLLIVTPYYSRPPQPAVEAHFRRVADATGVPLMLYDIPGRTGTRIEPETLLRLADHPRVVAVKDCAYDLLGSTKVIGAGSLSYYSGCEELNLPLYAVGAAGYVSTVANVAPRQLRAVLDAFDAGDTAEAARLNRLTVPLAELMMSSGLPGTVTAKALLDAGPVREPLQPAGREAADGLRKAYEELLAASAPPGKLCPGAPPSTHAPHGANIAGHGTSCGCAGRR

Samples

Sample ID Description Type Environment
1 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
2 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
3 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
4 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
9 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
10 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
11 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
12 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
13 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
14 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
15 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
16 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
21 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
22 3300030763 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
23 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
24 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
25 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
26 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
27 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
28 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
29 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
30 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
31 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
32 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
33 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
34 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
35 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
36 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
37 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
38 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
39 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
40 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
41 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
42 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
43 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
44 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
45 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
46 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
47 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
48 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
49 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
50 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
51 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
52 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
53 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
54 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
55 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
56 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
57 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
58 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
59 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
60 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
61 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
62 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
63 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
64 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
65 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
66 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
67 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
68 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
69 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
70 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
71 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
72 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
73 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
74 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
75 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
76 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
77 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
78 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
79 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
80 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
81 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
82 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
83 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
84 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
85 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
86 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
87 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
88 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
89 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
90 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
91 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
92 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
93 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
94 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
95 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
96 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
97 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
98 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
99 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
100 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
101 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
102 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
110 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
111 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
112 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
114 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
115 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
116 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
117 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
118 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
119 2643221548 Streptomyces sp. Root55 Isolate Unclassified
120 2643221578 Streptomyces sp. Root63 Isolate Unclassified
121 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
122 2643221647 Streptomyces sp. Root369 Isolate Unclassified
123 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
124 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
125 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
126 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
127 2643221714 Streptomyces sp. Root264 Isolate Unclassified
128 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
129 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
130 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
131 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
132 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
133 2808606448 Streptomyces sp. 193411 Isolate Unclassified
134 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
135 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
136 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
137 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
138 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
139 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
140 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
141 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
142 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
143 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
144 2867428634 Streptomyces sp. RP5T Isolate Unclassified
145 2867475112 Streptomyces sp. TM32 Isolate Unclassified
146 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
147 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
148 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
149 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
150 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
151 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
152 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
153 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
154 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
155 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
156 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
157 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
158 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
159 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
160 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
161 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
162 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
163 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
164 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
165 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
166 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
167 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
168 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
169 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
170 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
171 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.57
Metatranscriptomes 0.98
Isolates 27.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.98
Nodule 0
Rhizoplane 0.49
Rhizosphere 80.88
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1040959 3300003578 Bacteria 5370
2 Ga0070709_10009574 3300005434 Bacteria 5348
3 Ga0070710_10007808 3300005437 Bacteria 5192
4 Ga0070711_100038145 3300005439 Bacteria 3228
5 Ga0070706_100011475 3300005467 Bacteria 8235
6 Ga0070706_100339102 3300005467 Bacteria 1401
7 Ga0070707_100128204 3300005468 Bacteria 2466
8 Ga0070698_100008408 3300005471 Bacteria 11155
9 Ga0081455_10000386 3300005937 Bacteria 58274
10 Ga0075363_100089922 3300006048 Bacteria 1688
11 Ga0070715_10027207 3300006163 Bacteria 2283
12 Ga0070712_100096614 3300006175 Bacteria 2175
13 Ga0070712_100106393 3300006175 Bacteria 2085
14 Ga0111539_10161469 3300009094 Bacteria 2620
15 Ga0182008_10001095 3300014497 Bacteria 18690
16 Ga0182007_10000188 3300015262 Bacteria 41467
17 Ga0207426_1002245 3300025302 Bacteria 12849
18 Ga0207692_10011447 3300025898 Bacteria 3776
19 Ga0207699_10011168 3300025906 Bacteria 4526
20 Ga0207693_10038368 3300025915 Bacteria 3773
21 Ga0207646_10223937 3300025922 Bacteria 1699
22 Ga0307515_10038883 3300028794 Bacteria 7589
23 Ga0307512_10074786 3300030522 Bacteria 2484
24 Ga0265763_1001221 3300030763 Bacteria 1796
25 Ga0307513_10078551 3300031456 Bacteria 3413
26 Ga0307513_10261386 3300031456 Bacteria 1520
27 Ga0307508_10006297 3300031616 Bacteria 11176
28 Ga0373934_0010907 3300035086 Bacteria 3416
29 Ga0373923_0036998 3300035111 Bacteria 1995
30 Ga0373936_0024511 3300035113 Bacteria 2356
31 Ga0373953_0006897 3300035117 Bacteria 3771
32 Ga0373954_0007577 3300035118 Bacteria 4752
33 Ga0373954_0191560 3300035118 Bacteria 1004
34 Ga0373955_0082788 3300035172 Bacteria 1816
35 Ga0373935_0048984 3300035692 Bacteria 2677
36 Ga0373933_0011875 3300035724 Bacteria 4809
37 Ga0373937_0037002 3300036401 Bacteria 4447
38 Ga0373925_0073099 3300037068 Bacteria 2595
39 Ga0395898_0002430 3300037466 Bacteria 22027
40 Ga0395898_0299147 3300037466 Bacteria 1535
41 Ga0436364_0529943 3300037853 Bacteria 2888
42 Ga0395901_0203282 3300038443 Bacteria 2076
43 Ga0439436_0004635 3300041404 Bacteria 4215
44 Ga0451837_1175422 3300041494 Bacteria 3547
45 Ga0451853_1363695 3300041512 Bacteria 3438
46 Ga0439442_019137 3300042002 Bacteria 1416
47 Ga0439449_0001840 3300042007 Bacteria 8353
48 Ga0439449_0015780 3300042007 Bacteria 2839
49 Ga0439455_0046519 3300042012 Bacteria 1124
50 Ga0439457_007850 3300042014 Bacteria 2541
51 Ga0450903_000666 3300042138 Bacteria 6910
52 Ga0439458_0000390 3300042157 Bacteria 11061
53 Ga0466972_0019480 3300044658 Bacteria 3392
54 Ga0466972_0073369 3300044658 Bacteria 1631
55 Ga0466965_0001113 3300044683 Bacteria 10491
56 Ga0466965_0169545 3300044683 Bacteria 1148
57 Ga0466966_0004459 3300044684 Bacteria 9231
58 Ga0466966_0121091 3300044684 Bacteria 1607
59 Ga0466961_0004881 3300044693 Bacteria 8434
60 Ga0466963_0000304 3300044694 Bacteria 22181
61 Ga0466963_0036007 3300044694 Bacteria 3226
62 Ga0466970_0002243 3300044765 Bacteria 9327
63 Ga0466957_0003266 3300044842 Bacteria 8881
64 Ga0466959_0000355 3300045049 Bacteria 27014
65 Ga0466967_0003199 3300045976 Bacteria 10571
66 Ga0495592_0018995 3300046454 Bacteria 5231
67 Ga0495592_0055811 3300046454 Bacteria 2920
68 Ga0495603_0047620 3300046455 Bacteria 2552
69 Ga0495590_0088963 3300046457 Bacteria 1091
70 Ga0495629_0006329 3300046459 Bacteria 8781
71 Ga0495651_0039035 3300046462 Bacteria 3697
72 Ga0495653_0028309 3300046463 Bacteria 4480
73 Ga0495662_0001879 3300046476 Bacteria 10524
74 Ga0495662_0002542 3300046476 Bacteria 9209
75 Ga0495662_0036820 3300046476 Bacteria 2361
76 Ga0495594_0010469 3300046499 Bacteria 4810
77 Ga0495594_0022208 3300046499 Bacteria 3392
78 Ga0495607_0017378 3300046501 Bacteria 4619
79 Ga0495583_0065224 3300046506 Bacteria 1613
80 Ga0495606_0016690 3300046507 Bacteria 5585
81 Ga0495608_0196940 3300046511 Bacteria 1271
82 Ga0495618_0020714 3300046514 Bacteria 4047
83 Ga0495620_0001473 3300046515 Bacteria 14080
84 Ga0495630_0069140 3300046517 Bacteria 2656
85 Ga0495632_0034335 3300046519 Bacteria 2597
86 Ga0495648_0033716 3300046524 Bacteria 3341
87 Ga0495652_0037858 3300046529 Bacteria 4182
88 Ga0495652_0047956 3300046529 Bacteria 3662
89 Ga0495654_0040399 3300046530 Bacteria 2325
90 Ga0495640_0012789 3300046533 Bacteria 6404
91 Ga0495587_0012203 3300046536 Bacteria 5425
92 Ga0495609_0005027 3300046538 Bacteria 7072
93 Ga0495645_0262926 3300046543 Bacteria 1141
94 Ga0495667_0014396 3300046559 Bacteria 5343
95 Ga0495634_0016313 3300046642 Bacteria 5314
96 Ga0495625_0079260 3300046660 Bacteria 2291
97 Ga0495635_0005569 3300046663 Bacteria 8766
98 Ga0495635_0079832 3300046663 Bacteria 2239
99 Ga0495635_0188547 3300046663 Bacteria 1400
100 Ga0495661_0100161 3300046665 Bacteria 1632
101 Ga0495588_0061054 3300046674 Bacteria 1951
102 Ga0495657_0012204 3300046675 Bacteria 6391
103 Ga0495657_0022092 3300046675 Bacteria 4561
104 Ga0495599_0022913 3300046678 Bacteria 3900
105 Ga0495623_0026400 3300046679 Bacteria 3739
106 Ga0495646_0018944 3300046680 Bacteria 4358
107 Ga0495613_0003862 3300046689 Bacteria 11207
108 Ga0495613_0028216 3300046689 Bacteria 4175
109 Ga0495613_0108858 3300046689 Bacteria 1998
110 Ga0495624_0028470 3300046690 Bacteria 3652
111 Ga0495624_0055509 3300046690 Bacteria 2495
112 Ga0495589_0016422 3300046794 Bacteria 3806
113 Ga0495589_0048736 3300046794 Bacteria 2096
114 Ga0495589_0068165 3300046794 Bacteria 1741
115 Ga0495600_0015689 3300046809 Bacteria 4795
116 Ga0495600_0081923 3300046809 Bacteria 2106
117 Ga0495600_0149463 3300046809 Bacteria 1513
118 Ga0495676_0006680 3300047321 Bacteria 10630
119 Ga0495680_0005912 3300047322 Bacteria 11442
120 Ga0495680_0048154 3300047322 Bacteria 3348
121 Ga0495683_0016503 3300047323 Bacteria 3834
122 Ga0495687_023995 3300047443 Bacteria 2906
123 Ga0495685_002376 3300047447 Bacteria 5893
124 Ga0495685_017929 3300047447 Bacteria 2426
125 Ga0495685_044091 3300047447 Bacteria 1521
126 Ga0495602_0088525 3300048088 Bacteria 2577
127 Ga0495626_0006580 3300048091 Bacteria 6591
128 Ga0496109_0009374 3300048912 Bacteria 8340
129 Ga0495678_062743 3300049459 Bacteria 1390
130 Ga0501031_0028252 3300049568 Bacteria 3657
131 Ga0501033_0006118 3300049570 Bacteria 9441
132 Ga0501034_0091973 3300049571 Bacteria 3031
133 Ga0501034_0212666 3300049571 Bacteria 1888
134 Ga0501036_0129841 3300049572 Bacteria 2127
135 Ga0501037_0214468 3300049573 Bacteria 1356
136 Ga0501038_0015403 3300049574 Bacteria 6951
137 Ga0501038_0139643 3300049574 Bacteria 1983
138 Ga0501047_0041039 3300049581 Bacteria 4472
139 Ga0501047_0383074 3300049581 Bacteria 1241
140 Ga0501069_0000811 3300049585 Bacteria 14715
141 Ga0501073_0066689 3300049589 Bacteria 2509
142 Ga0501080_0141956 3300049742 Bacteria 2220
143 Ga0501035_0085197 3300049822 Bacteria 2786
144 Ga0501044_0015348 3300049823 Bacteria 8249
145 Ga0501044_0033014 3300049823 Bacteria 5439
146 Ga0495595_0021081 3300053084 Bacteria 2844
147 Ga0466962_0000698 3300061719 Bacteria 14941
148 Ga0466962_0058808 3300061719 Bacteria 1834
149 2585298634 2582581312 Bacteria 7308206
150 2554259150 2554235005 Bacteria 6457341
151 2585307597 2582581313 Bacteria 10042643
152 2643759102 2643221548 Bacteria 8053412
153 2643897150 2643221578 Bacteria 9213798
154 2643945379 2643221587 Bacteria 7586415
155 2644270874 2643221647 Bacteria 10741251
156 2644408294 2643221673 Bacteria 9196637
157 2644432278 2643221677 Bacteria 7584031
158 2644435537 2643221678 Bacteria 9540101
159 2644463480 2643221682 Bacteria 6743283
160 2644630476 2643221714 Bacteria 9015452
161 2768646723 2767802112 Bacteria 6465194
162 2784587167 2784132148 Bacteria 8627943
163 2785345210 2784746763 Bacteria 9783172
164 2786668733 2786546132 Bacteria 10419719
165 2808918919 2808606375 Bacteria 9466072
166 2809230728 2808606448 Bacteria 8656184
167 2811847387 2808606982 Bacteria 7791042
168 2812359843 2811994879 Bacteria 9313447
169 2819694328 2818991463 Bacteria 7948711
170 2852638179 2852635781 Bacteria 8251373
171 2862183179 2862178590 Bacteria 8583590
172 2862291539 2862290372 Bacteria 7471434
173 2862508556 2862507626 Bacteria 9425308
174 2862707249 2862705112 Bacteria 6563286
175 2863406465 2863404153 Bacteria 9672205
176 2867351967 2867346516 Bacteria 7608576
177 2867435653 2867428634 Bacteria 9590268
178 2867476227 2867475112 Bacteria 6909112
179 2875393098 2875391855 Bacteria 7600475
180 2877682868 2877676314 Bacteria 9512378
181 2912725691 2912723979 Bacteria 8557534
182 2918502978 2918501144 Bacteria 8668083
183 2946051593 2946045630 Bacteria 8527308
184 2946066064 2946064051 Bacteria 8957905
185 2954388065 2954380949 Bacteria 10050426
186 2954675014 2954673503 Bacteria 9685905
187 2954689121 2954682443 Bacteria 9862841
188 2954698872 2954691527 Bacteria 10720516
189 2954703349 2954701450 Bacteria 10834262
190 2954717849 2954711539 Bacteria 10867210
191 2954727814 2954721474 Bacteria 10456478
192 2954733988 2954731030 Bacteria 10243860
193 2954746714 2954740390 Bacteria 10229294
194 2954752870 2954749733 Bacteria 10366972
195 2954765824 2954759201 Bacteria 9358192
196 2966603941 2966598605 Bacteria 7676064
197 2990044708 2990044586 Bacteria 6603797
198 2990066289 2990059506 Bacteria 9321252
199 2997458750 2997451912 Bacteria 8492419
200 3006398125 3006393351 Bacteria 6615579
201 8008489719 8008485437 Bacteria 7198341
202 8008580311 8008574985 Bacteria 7815457
203 8025528705 8025524527 Bacteria 7197316
204 8056833085 8056829672 Bacteria 9045328
205 Ga0006562J51391_1040959
206 Ga0070709_10009574
207 Ga0070710_10007808
208 Ga0070711_100038145
209 Ga0070706_100011475
210 Ga0070706_100339102
211 Ga0070707_100128204
212 Ga0070698_100008408
213 Ga0081455_10000386
214 Ga0075363_100089922
215 Ga0070715_10027207
216 Ga0070712_100096614
217 Ga0070712_100106393
218 Ga0111539_10161469
219 Ga0182008_10001095
220 Ga0182007_10000188
221 Ga0207426_1002245
222 Ga0207692_10011447
223 Ga0207699_10011168
224 Ga0207693_10038368
225 Ga0207646_10223937
226 Ga0307515_10038883
227 Ga0307512_10074786
228 Ga0265763_1001221
229 Ga0307513_10078551
230 Ga0307513_10261386
231 Ga0307508_10006297
232 Ga0373934_0010907
233 Ga0373923_0036998
234 Ga0373936_0024511
235 Ga0373953_0006897
236 Ga0373954_0007577
237 Ga0373954_0191560
238 Ga0373955_0082788
239 Ga0373935_0048984
240 Ga0373933_0011875
241 Ga0373937_0037002
242 Ga0373925_0073099
243 Ga0395898_0002430
244 Ga0395898_0299147
245 Ga0436364_0529943
246 Ga0395901_0203282
247 Ga0439436_0004635
248 Ga0451837_1175422
249 Ga0451853_1363695
250 Ga0439442_019137
251 Ga0439449_0001840
252 Ga0439449_0015780
253 Ga0439455_0046519
254 Ga0439457_007850
255 Ga0450903_000666
256 Ga0439458_0000390
257 Ga0466972_0019480
258 Ga0466972_0073369
259 Ga0466965_0001113
260 Ga0466965_0169545
261 Ga0466966_0004459
262 Ga0466966_0121091
263 Ga0466961_0004881
264 Ga0466963_0000304
265 Ga0466963_0036007
266 Ga0466970_0002243
267 Ga0466957_0003266
268 Ga0466959_0000355
269 Ga0466967_0003199
270 Ga0495592_0018995
271 Ga0495592_0055811
272 Ga0495603_0047620
273 Ga0495590_0088963
274 Ga0495629_0006329
275 Ga0495651_0039035
276 Ga0495653_0028309
277 Ga0495662_0001879
278 Ga0495662_0002542
279 Ga0495662_0036820
280 Ga0495594_0010469
281 Ga0495594_0022208
282 Ga0495607_0017378
283 Ga0495583_0065224
284 Ga0495606_0016690
285 Ga0495608_0196940
286 Ga0495618_0020714
287 Ga0495620_0001473
288 Ga0495630_0069140
289 Ga0495632_0034335
290 Ga0495648_0033716
291 Ga0495652_0037858
292 Ga0495652_0047956
293 Ga0495654_0040399
294 Ga0495640_0012789
295 Ga0495587_0012203
296 Ga0495609_0005027
297 Ga0495645_0262926
298 Ga0495667_0014396
299 Ga0495634_0016313
300 Ga0495625_0079260
301 Ga0495635_0005569
302 Ga0495635_0079832
303 Ga0495635_0188547
304 Ga0495661_0100161
305 Ga0495588_0061054
306 Ga0495657_0012204
307 Ga0495657_0022092
308 Ga0495599_0022913
309 Ga0495623_0026400
310 Ga0495646_0018944
311 Ga0495613_0003862
312 Ga0495613_0028216
313 Ga0495613_0108858
314 Ga0495624_0028470
315 Ga0495624_0055509
316 Ga0495589_0016422
317 Ga0495589_0048736
318 Ga0495589_0068165
319 Ga0495600_0015689
320 Ga0495600_0081923
321 Ga0495600_0149463
322 Ga0495676_0006680
323 Ga0495680_0005912
324 Ga0495680_0048154
325 Ga0495683_0016503
326 Ga0495687_023995
327 Ga0495685_002376
328 Ga0495685_017929
329 Ga0495685_044091
330 Ga0495602_0088525
331 Ga0495626_0006580
332 Ga0496109_0009374
333 Ga0495678_062743
334 Ga0501031_0028252
335 Ga0501033_0006118
336 Ga0501034_0091973
337 Ga0501034_0212666
338 Ga0501036_0129841
339 Ga0501037_0214468
340 Ga0501038_0015403
341 Ga0501038_0139643
342 Ga0501047_0041039
343 Ga0501047_0383074
344 Ga0501069_0000811
345 Ga0501073_0066689
346 Ga0501080_0141956
347 Ga0501035_0085197
348 Ga0501044_0015348
349 Ga0501044_0033014
350 Ga0495595_0021081
351 Ga0466962_0000698
352 Ga0466962_0058808
353 2585298634
354 2554259150
355 2585307597
356 2643759102
357 2643897150
358 2643945379
359 2644270874
360 2644408294
361 2644432278
362 2644435537
363 2644463480
364 2644630476
365 2768646723
366 2784587167
367 2785345210
368 2786668733
369 2808918919
370 2809230728
371 2811847387
372 2812359843
373 2819694328
374 2852638179
375 2862183179
376 2862291539
377 2862508556
378 2862707249
379 2863406465
380 2867351967
381 2867435653
382 2867476227
383 2875393098
384 2877682868
385 2912725691
386 2918502978
387 2946051593
388 2946066064
389 2954388065
390 2954675014
391 2954689121
392 2954698872
393 2954703349
394 2954717849
395 2954727814
396 2954733988
397 2954746714
398 2954752870
399 2954765824
400 2966603941
401 2990044708
402 2990066289
403 2997458750
404 3006398125
405 8008489719
406 8008580311
407 8025528705
408 8056833085

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00701

DHDPS

Dihydrodipicolinate synthetase family

9

291

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5j5d-assembly1.cif.gz_A crystal structure of dihydrodipicolinate synthase from mycobacterium tuberculosis in complex with alpha-ketopimelic acid 0.9793 11 299
3l21-assembly2.cif.gz_C the crystal structure of a dimeric mutant of dihydrodipicolinate synthase (dapa, rv2753c) from mycobacterium tuberculosis - dhdps-a204r 0.9773 11 299
5ktl-assembly1.cif.gz_A dihydrodipicolinate synthase from the industrial and evolutionarily important cyanobacteria anabaena variabilis. 0.9623 10 299
5ud6-assembly1.cif.gz_B crystal structure of dhdps from cyanidioschyzon merolae with lysine bound 0.9608 11 299
3hij-assembly1.cif.gz_D crystal structure of dihydrodipicolinate synthase from bacillus anthracis in complex with its substrate, pyruvate 0.9584 12 302
ID Description Score Start End Superfamily
5ud6B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9608 11 299 3.20.20.70
1xl9D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9578 12 302 3.20.20.70
2yxgD00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.953 12 299 3.20.20.70
2rfgB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9521 12 300 3.20.20.70
3pb2D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9517 10 299 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A2G7EUD5-F1-model_v4 deleted 0.9954 6 300
AF-A0A0X3SBL1-F1-model_v4 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7) 0.989 1 300 GO:0005829
GO:0008840
GO:0009089
GO:0019877
AF-A0A2G7EUD5-F1-model_v4 deleted 0.9887 6 300
AF-W4TGE0-F1-model_v4 deleted 0.9814 29 142
AF-A0A7C6Y3S3-F1-model_v4 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.9812 12 183 GO:0005829
GO:0008840
GO:0009089
GO:0019877

Map