F313098
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 204 | 150 | 199 | 199 |
Family's Representative Sequence
| Representative Sequence | 3300050496|nmdc:mga07m45_131379_c1|nmdc:mga07m45_131379_c1_420_1100 |
| Length | 226 |
| Sequence | VDRDGSVTQRSFSLRGDVPREETSMFIQVIQGKVSDEAGLRRCMDRWTEDVRPGATGFLGCTQGLCDDGTFIALARFESADAARRNSERPEQGAWWAETERCFDGAVSFMDCPDVMEWMGGGSDDATFVQVMEGHTTDASRMRELLEQAEPQLHQLRPEILGGTLCTYGDGGYVEAVYFTSEAEARSHEKLEVPDDLRSLFEEEGRLTDDVTYYDMHSPMLVAAGR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2523231044 | Gordonia rhizosphera NBRC 16068 | Isolate | Rhizosphere |
| 2 | 2738543011 | Rhodococcus sp. OK611 | Isolate | Unclassified |
| 3 | 2744054611 | Aldersonia kunmingensis DSM 45001 | Isolate | Rhizosphere |
| 4 | 2889300758 | Rhodococcus sp. PvR099 | Isolate | Rhizosphere |
| 5 | 2939743619 | Rhodococcus sp. PvR044 | Isolate | Rhizosphere |
| 6 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 7 | 3300004798 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) | Metatranscriptome | Unclassified |
| 8 | 3300004799 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 9 | 3300004801 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) | Metatranscriptome | Unclassified |
| 10 | 3300004803 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 11 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 12 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 15 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 16 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 22 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 25 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 26 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 27 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 30 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 31 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 32 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 33 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 34 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 35 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 36 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 37 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 38 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 39 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 40 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 41 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 42 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 43 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 44 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 45 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 46 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 47 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 48 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300013062 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 54 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 60 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 61 | 3300020075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 62 | 3300020076 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) | Metatranscriptome | Rhizosphere |
| 63 | 3300020077 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 64 | 3300020078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 65 | 3300020080 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 66 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 67 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 68 | 3300020610 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 69 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 70 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 88 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 89 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 90 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 91 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 92 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 93 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 94 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 95 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 96 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 97 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 98 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 99 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 100 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 101 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 102 | 3300041452 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG | Metagenome | Rhizoplane |
| 103 | 3300041460 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG | Metagenome | Rhizoplane |
| 104 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 105 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 106 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 107 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 108 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 109 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 110 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 111 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 112 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 126 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 127 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 128 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 129 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 130 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 131 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 132 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 133 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 134 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 135 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 136 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 137 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 139 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 140 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 141 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 142 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 143 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 144 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 145 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 146 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 147 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 148 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 149 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 150 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 83.33 |
| Metatranscriptomes | 14.22 |
| Isolates | 2.45 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 14.71 |
| Nodule | 0 |
| Rhizoplane | 10.78 |
| Rhizosphere | 70.59 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 3.92 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24737J22298_10095267 | 3300001990 | Bacteria | 882 |
| 2 | Ga0058859_11804537 | 3300004798 | Bacteria | 671 |
| 3 | Ga0058863_10027882 | 3300004799 | Bacteria | 1094 |
| 4 | Ga0058860_11846751 | 3300004801 | Bacteria | 675 |
| 5 | Ga0058860_12009241 | 3300004801 | Bacteria | 901 |
| 6 | Ga0058862_10057022 | 3300004803 | Bacteria | 1211 |
| 7 | Ga0070683_100127245 | 3300005329 | Bacteria | 2409 |
| 8 | Ga0070683_100347950 | 3300005329 | Bacteria | 1411 |
| 9 | Ga0070683_100640330 | 3300005329 | Bacteria | 1018 |
| 10 | Ga0070670_100466094 | 3300005331 | Bacteria | 1121 |
| 11 | Ga0070677_10072439 | 3300005333 | Bacteria | 1453 |
| 12 | Ga0070682_100600908 | 3300005337 | Bacteria | 869 |
| 13 | Ga0070687_100311141 | 3300005343 | Bacteria | 1003 |
| 14 | Ga0070668_100337718 | 3300005347 | Bacteria | 1272 |
| 15 | Ga0070669_100159224 | 3300005353 | Bacteria | 1753 |
| 16 | Ga0070675_100202523 | 3300005354 | Bacteria | 1723 |
| 17 | Ga0070667_101210135 | 3300005367 | Bacteria | 707 |
| 18 | Ga0070714_100000007 | 3300005435 | Bacteria | 285654 |
| 19 | Ga0070713_100341208 | 3300005436 | Bacteria | 1388 |
| 20 | Ga0070708_100412370 | 3300005445 | Bacteria | 1274 |
| 21 | Ga0070663_100758882 | 3300005455 | Bacteria | 829 |
| 22 | Ga0070698_100916463 | 3300005471 | Bacteria | 822 |
| 23 | Ga0070679_100989962 | 3300005530 | Bacteria | 785 |
| 24 | Ga0070684_100283433 | 3300005535 | Unclassified | 1518 |
| 25 | Ga0070672_100532937 | 3300005543 | Bacteria | 1018 |
| 26 | Ga0070665_101160421 | 3300005548 | Bacteria | 783 |
| 27 | Ga0070665_101228528 | 3300005548 | Bacteria | 760 |
| 28 | Ga0068852_100227468 | 3300005616 | Bacteria | 1777 |
| 29 | Ga0068860_100235917 | 3300005843 | Bacteria | 1778 |
| 30 | Ga0081455_10004171 | 3300005937 | Bacteria | 16300 |
| 31 | Ga0081540_1123062 | 3300005983 | Bacteria | 1072 |
| 32 | Ga0075365_10012841 | 3300006038 | Bacteria | 4990 |
| 33 | Ga0075365_10024874 | 3300006038 | Bacteria | 3785 |
| 34 | Ga0075365_10446642 | 3300006038 | Bacteria | 913 |
| 35 | Ga0075368_10044312 | 3300006042 | Bacteria | 1755 |
| 36 | Ga0075363_100012925 | 3300006048 | Bacteria | 4032 |
| 37 | Ga0075364_10016074 | 3300006051 | Bacteria | 4650 |
| 38 | Ga0075362_10042256 | 3300006177 | Bacteria | 2014 |
| 39 | Ga0075362_10181088 | 3300006177 | Bacteria | 1021 |
| 40 | Ga0075367_10119056 | 3300006178 | Bacteria | 1626 |
| 41 | Ga0075369_10016613 | 3300006186 | Bacteria | 2973 |
| 42 | Ga0075366_10293611 | 3300006195 | Bacteria | 994 |
| 43 | Ga0075370_10018276 | 3300006353 | Bacteria | 3802 |
| 44 | Ga0075370_10098931 | 3300006353 | Bacteria | 1687 |
| 45 | Ga0075370_10207615 | 3300006353 | Bacteria | 1156 |
| 46 | Ga0068871_100237303 | 3300006358 | Bacteria | 1584 |
| 47 | Ga0075428_100013091 | 3300006844 | Bacteria | 9224 |
| 48 | Ga0075428_100063190 | 3300006844 | Bacteria | 4053 |
| 49 | Ga0075428_100606765 | 3300006844 | Unclassified | 1169 |
| 50 | Ga0075430_100018431 | 3300006846 | Bacteria | 5939 |
| 51 | Ga0075430_100416045 | 3300006846 | Bacteria | 1110 |
| 52 | Ga0075430_100699868 | 3300006846 | Bacteria | 835 |
| 53 | Ga0075431_100019840 | 3300006847 | Bacteria | 6864 |
| 54 | Ga0075431_101027744 | 3300006847 | Bacteria | 790 |
| 55 | Ga0075429_100077355 | 3300006880 | Bacteria | 2899 |
| 56 | Ga0068865_100866840 | 3300006881 | Bacteria | 783 |
| 57 | Ga0105245_10184713 | 3300009098 | Bacteria | 1994 |
| 58 | Ga0105245_10437593 | 3300009098 | Bacteria | 1314 |
| 59 | Ga0114129_10237212 | 3300009147 | Bacteria | 2453 |
| 60 | Ga0105243_10023897 | 3300009148 | Bacteria | 4657 |
| 61 | Ga0105248_10807268 | 3300009177 | Bacteria | 1059 |
| 62 | Ga0105246_10548082 | 3300011119 | Bacteria | 991 |
| 63 | Ga0154010_134934 | 3300013062 | Bacteria | 1110 |
| 64 | Ga0157369_10488300 | 3300013105 | Bacteria | 1274 |
| 65 | Ga0157372_10548797 | 3300013307 | Bacteria | 1347 |
| 66 | Ga0163163_10207401 | 3300014325 | Bacteria | 2008 |
| 67 | Ga0157380_10178818 | 3300014326 | Bacteria | 1862 |
| 68 | Ga0157380_11386484 | 3300014326 | Bacteria | 753 |
| 69 | Ga0157379_11403323 | 3300014968 | Bacteria | 677 |
| 70 | Ga0197907_10096707 | 3300020069 | Plasmid | 2845 |
| 71 | Ga0197907_11150377 | 3300020069 | Bacteria | 2954 |
| 72 | Ga0206356_10037073 | 3300020070 | Bacteria | 1150 |
| 73 | Ga0206356_10709812 | 3300020070 | Bacteria | 1785 |
| 74 | Ga0206356_11048329 | 3300020070 | Bacteria | 3975 |
| 75 | Ga0206349_1149093 | 3300020075 | Unclassified | 1498 |
| 76 | Ga0206349_1390681 | 3300020075 | Unclassified | 1844 |
| 77 | Ga0206355_1384735 | 3300020076 | Bacteria | 1196 |
| 78 | Ga0206355_1470291 | 3300020076 | Unclassified | 1899 |
| 79 | Ga0206351_10198140 | 3300020077 | Bacteria | 790 |
| 80 | Ga0206351_10392129 | 3300020077 | Bacteria | 1350 |
| 81 | Ga0206352_10416012 | 3300020078 | Bacteria | 1797 |
| 82 | Ga0206352_10695678 | 3300020078 | Bacteria | 2691 |
| 83 | Ga0206350_10745872 | 3300020080 | Bacteria | 3974 |
| 84 | Ga0206350_10915587 | 3300020080 | Bacteria | 2403 |
| 85 | Ga0206354_10316994 | 3300020081 | Bacteria | 3904 |
| 86 | Ga0206354_10404610 | 3300020081 | Bacteria | 1760 |
| 87 | Ga0206354_11686715 | 3300020081 | Bacteria | 682 |
| 88 | Ga0206353_11013320 | 3300020082 | Bacteria | 4106 |
| 89 | Ga0206353_11934766 | 3300020082 | Bacteria | 1045 |
| 90 | Ga0154015_1105311 | 3300020610 | Bacteria | 1044 |
| 91 | Ga0154015_1651667 | 3300020610 | Unclassified | 2004 |
| 92 | Ga0224712_10227096 | 3300022467 | Bacteria | 856 |
| 93 | Ga0207688_10048575 | 3300025901 | Bacteria | 2371 |
| 94 | Ga0207647_10131195 | 3300025904 | Bacteria | 1473 |
| 95 | Ga0207684_11278474 | 3300025910 | Bacteria | 605 |
| 96 | Ga0207659_10773476 | 3300025926 | Bacteria | 824 |
| 97 | Ga0207700_10228094 | 3300025928 | Bacteria | 1582 |
| 98 | Ga0207664_10000014 | 3300025929 | Bacteria | 249865 |
| 99 | Ga0207709_10078375 | 3300025935 | Bacteria | 2121 |
| 100 | Ga0207669_10316200 | 3300025937 | Bacteria | 1193 |
| 101 | Ga0207691_10401096 | 3300025940 | Bacteria | 1170 |
| 102 | Ga0207661_10296603 | 3300025944 | Bacteria | 1448 |
| 103 | Ga0207678_10750561 | 3300026067 | Bacteria | 860 |
| 104 | Ga0207708_10816886 | 3300026075 | Bacteria | 803 |
| 105 | Ga0207676_11083001 | 3300026095 | Bacteria | 792 |
| 106 | Ga0207683_10088385 | 3300026121 | Bacteria | 2757 |
| 107 | Ga0207683_10899360 | 3300026121 | Bacteria | 822 |
| 108 | Ga0207698_10259514 | 3300026142 | Bacteria | 1595 |
| 109 | Ga0268266_11403346 | 3300028379 | Bacteria | 674 |
| 110 | Ga0268264_10124510 | 3300028381 | Bacteria | 2276 |
| 111 | Ga0307513_10006259 | 3300031456 | Bacteria | 15592 |
| 112 | Ga0316575_10004501 | 3300031665 | Bacteria | 4908 |
| 113 | Ga0316579_10000707 | 3300031691 | Bacteria | 11384 |
| 114 | Ga0316576_10012729 | 3300031727 | Bacteria | 5565 |
| 115 | Ga0316578_10006796 | 3300031728 | Bacteria | 5677 |
| 116 | Ga0307412_10729509 | 3300031911 | Unclassified | 853 |
| 117 | Ga0307415_100577736 | 3300032126 | Unclassified | 996 |
| 118 | Ga0316585_10017146 | 3300032137 | Bacteria | 2188 |
| 119 | Ga0373954_0514904 | 3300035118 | Bacteria | 593 |
| 120 | Ga0316574_0055380 | 3300035398 | Bacteria | 2478 |
| 121 | Ga0316582_0063715 | 3300036647 | Bacteria | 2369 |
| 122 | Ga0316584_0003519 | 3300036712 | Bacteria | 10206 |
| 123 | Ga0395900_0507321 | 3300037418 | Bacteria | 1156 |
| 124 | Ga0395898_0100018 | 3300037466 | Bacteria | 2785 |
| 125 | Ga0395898_0573082 | 3300037466 | Bacteria | 1071 |
| 126 | Ga0395905_0383411 | 3300037471 | Bacteria | 1300 |
| 127 | Ga0451793_1868869 | 3300041452 | Bacteria | 2738 |
| 128 | Ga0451802_0045714 | 3300041460 | Bacteria | 975 |
| 129 | Ga0451853_1323847 | 3300041512 | Unclassified | 915 |
| 130 | Ga0451853_2217513 | 3300041512 | Bacteria | 1972 |
| 131 | Ga0451853_2657413 | 3300041512 | Bacteria | 1367 |
| 132 | Ga0466969_0035906 | 3300044656 | Bacteria | 2506 |
| 133 | Ga0466966_0012696 | 3300044684 | Bacteria | 5583 |
| 134 | Ga0466961_0066779 | 3300044693 | Bacteria | 2284 |
| 135 | Ga0466963_0046447 | 3300044694 | Bacteria | 2863 |
| 136 | Ga0466971_0319342 | 3300044719 | Bacteria | 748 |
| 137 | Ga0466959_0081839 | 3300045049 | Bacteria | 2327 |
| 138 | Ga0466959_0094830 | 3300045049 | Bacteria | 2140 |
| 139 | Ga0466967_0712245 | 3300045976 | Bacteria | 994 |
| 140 | Ga0495641_0224365 | 3300046461 | Bacteria | 843 |
| 141 | Ga0495580_0536831 | 3300046472 | Bacteria | 778 |
| 142 | Ga0495639_0360030 | 3300046475 | Bacteria | 731 |
| 143 | Ga0495664_0171812 | 3300046477 | Bacteria | 1315 |
| 144 | Ga0495608_0049259 | 3300046511 | Bacteria | 2797 |
| 145 | Ga0495665_0007599 | 3300046531 | Bacteria | 5870 |
| 146 | Ga0495667_0046474 | 3300046559 | Bacteria | 2871 |
| 147 | Ga0495635_0137780 | 3300046663 | Bacteria | 1663 |
| 148 | Ga0495600_0219954 | 3300046809 | Bacteria | 1215 |
| 149 | Ga0495581_0035407 | 3300047315 | Bacteria | 2889 |
| 150 | Ga0495581_0171651 | 3300047315 | Bacteria | 1268 |
| 151 | Ga0495674_0105954 | 3300047319 | Bacteria | 2388 |
| 152 | Ga0495676_0463466 | 3300047321 | Bacteria | 835 |
| 153 | Ga0495676_0783872 | 3300047321 | Bacteria | 614 |
| 154 | Ga0495593_0447003 | 3300047673 | Bacteria | 647 |
| 155 | Ga0496100_0008743 | 3300048903 | Bacteria | 5659 |
| 156 | Ga0496101_0116689 | 3300048904 | Bacteria | 2014 |
| 157 | Ga0496102_0023340 | 3300048905 | Bacteria | 5492 |
| 158 | Ga0496102_0190130 | 3300048905 | Bacteria | 1934 |
| 159 | Ga0496102_0234323 | 3300048905 | Bacteria | 1731 |
| 160 | Ga0496104_0010036 | 3300048907 | Bacteria | 8453 |
| 161 | Ga0496105_0092454 | 3300048908 | Bacteria | 2498 |
| 162 | Ga0496106_0077811 | 3300048909 | Bacteria | 2544 |
| 163 | Ga0496107_0104779 | 3300048910 | Bacteria | 2076 |
| 164 | Ga0496108_0035510 | 3300048911 | Bacteria | 4145 |
| 165 | Ga0496109_0256092 | 3300048912 | Bacteria | 1648 |
| 166 | Ga0496109_1551232 | 3300048912 | Bacteria | 597 |
| 167 | Ga0496110_0022750 | 3300048913 | Bacteria | 5326 |
| 168 | Ga0496113_0170843 | 3300048916 | Bacteria | 1722 |
| 169 | Ga0496114_0002208 | 3300048917 | Bacteria | 14826 |
| 170 | Ga0496114_0003986 | 3300048917 | Bacteria | 11402 |
| 171 | Ga0496114_0023387 | 3300048917 | Bacteria | 5043 |
| 172 | Ga0496114_0046184 | 3300048917 | Bacteria | 3619 |
| 173 | Ga0496114_0105831 | 3300048917 | Bacteria | 2407 |
| 174 | Ga0496114_0247023 | 3300048917 | Bacteria | 1570 |
| 175 | Ga0501067_0062539 | 3300049583 | Bacteria | 2060 |
| 176 | nmdc:mga03683_235457_c1 | 3300050489 | Bacteria | 848 |
| 177 | nmdc:mga03683_255679_c1 | 3300050489 | Bacteria | 814 |
| 178 | nmdc:mga03683_405134_c1 | 3300050489 | Bacteria | 652 |
| 179 | nmdc:mga03n38_105954_c1 | 3300050490 | Bacteria | 1363 |
| 180 | nmdc:mga03n38_52082_c1 | 3300050490 | Bacteria | 1830 |
| 181 | nmdc:mga03n38_523312_c1 | 3300050490 | Bacteria | 668 |
| 182 | nmdc:mga00v17_152666_c1 | 3300050491 | Bacteria | 1484 |
| 183 | nmdc:mga00v17_258739_c1 | 3300050491 | Bacteria | 1129 |
| 184 | nmdc:mga00v17_461379_c1 | 3300050491 | Bacteria | 824 |
| 185 | nmdc:mga0yw44_24882_c1 | 3300050492 | Bacteria | 3395 |
| 186 | nmdc:mga0yw44_47134_c1 | 3300050492 | Bacteria | 2592 |
| 187 | nmdc:mga0yw44_639734_c1 | 3300050492 | Bacteria | 723 |
| 188 | nmdc:mga06z11_151253_c1 | 3300050494 | Bacteria | 1320 |
| 189 | nmdc:mga07m45_131379_c1 | 3300050496 | Bacteria | 1449 |
| 190 | nmdc:mga09592_31148_c1 | 3300050508 | Bacteria | 4442 |
| 191 | nmdc:mga0qj67_348469_c1 | 3300050509 | Bacteria | 1197 |
| 192 | nmdc:mga0qj67_6590_c1 | 3300050509 | Bacteria | 8531 |
| 193 | nmdc:mga06r32_218542_c1 | 3300050510 | Bacteria | 1894 |
| 194 | nmdc:mga06r32_5228_c1 | 3300050510 | Bacteria | 11669 |
| 195 | nmdc:mga06r32_983204_c1 | 3300050510 | Unclassified | 797 |
| 196 | nmdc:mga0n895_1303112_c1 | 3300050512 | Bacteria | 697 |
| 197 | nmdc:mga0sz30_24222_c1 | 3300050516 | Bacteria | 2025 |
| 198 | Ga0495619_0744917 | 3300053085 | Bacteria | 665 |
| 199 | Ga0500604_0077237 | 3300053151 | Bacteria | 1071 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005343 | Ga0070687_100311141 | Ga0070687_1003111412 | 162 |
| 2 | 3300035118 | Ga0373954_0514904 | Ga0373954_0514904_31_570 | 179 |
| 3 | 3300005543 | Ga0070672_100532937 | Ga0070672_1005329371 | 180 |
| 4 | 3300004801 | Ga0058860_12009241 | Ga0058860_120092411 | 181 |
| 5 | 3300048912 | Ga0496109_1551232 | Ga0496109_1551232_19_564 | 181 |
| 6 | 3300044656 | Ga0466969_0035906 | Ga0466969_0035906_138_752 | 182 |
| 7 | 3300045049 | Ga0466959_0081839 | Ga0466959_0081839_245_859 | 182 |
| 8 | 3300025910 | Ga0207684_11278474 | Ga0207684_112784741 | 183 |
| 9 | 3300047321 | Ga0495676_0783872 | Ga0495676_0783872_28_579 | 183 |
| 10 | 3300047673 | Ga0495593_0447003 | Ga0495593_0447003_61_612 | 183 |
| 11 | 3300050490 | nmdc:mga03n38_523312_c1 | nmdc:mga03n38_523312_c1_11_565 | 183 |
| 12 | 3300044694 | Ga0466963_0046447 | Ga0466963_0046447_1142_1750 | 184 |
| 13 | 3300045976 | Ga0466967_0712245 | Ga0466967_0712245_70_678 | 184 |
| 14 | 3300013307 | Ga0157372_10548797 | Ga0157372_105487972 | 185 |
| 15 | 3300005436 | Ga0070713_100341208 | Ga0070713_1003412081 | 188 |
| 16 | 3300025928 | Ga0207700_10228094 | Ga0207700_102280942 | 188 |
| 17 | 3300005937 | Ga0081455_10004171 | Ga0081455_100041717 | 189 |
| 18 | iso_pu_bacteria | 2889300758 | 2889304883 | 189 |
| 19 | 3300050512 | nmdc:mga0n895_1303112_c1 | nmdc:mga0n895_1303112_c1_13_609 | 190 |
| 20 | 3300006844 | Ga0075428_100063190 | Ga0075428_1000631908 | 191 |
| 21 | 3300006846 | Ga0075430_100018431 | Ga0075430_10001843110 | 191 |
| 22 | 3300009147 | Ga0114129_10237212 | Ga0114129_102372123 | 191 |
| 23 | 3300050509 | nmdc:mga0qj67_6590_c1 | nmdc:mga0qj67_6590_c1_5148_5750 | 191 |
| 24 | 3300050510 | nmdc:mga06r32_5228_c1 | nmdc:mga06r32_5228_c1_655_1257 | 191 |
| 25 | 3300006847 | Ga0075431_101027744 | Ga0075431_1010277441 | 196 |
| 26 | iso_pu_bacteria | 2744054611 | 2744957823 | 196 |
| 27 | 3300005329 | Ga0070683_100127245 | Ga0070683_1001272452 | 197 |
| 28 | 3300006844 | Ga0075428_100013091 | Ga0075428_1000130917 | 197 |
| 29 | 3300006846 | Ga0075430_100416045 | Ga0075430_1004160452 | 197 |
| 30 | 3300006846 | Ga0075430_100699868 | Ga0075430_1006998681 | 197 |
| 31 | 3300006847 | Ga0075431_100019840 | Ga0075431_1000198408 | 197 |
| 32 | 3300006880 | Ga0075429_100077355 | Ga0075429_1000773553 | 197 |
| 33 | 3300009098 | Ga0105245_10437593 | Ga0105245_104375932 | 197 |
| 34 | 3300026075 | Ga0207708_10816886 | Ga0207708_108168862 | 197 |
| 35 | 3300037466 | Ga0395898_0573082 | Ga0395898_0573082_149_742 | 197 |
| 36 | 3300037471 | Ga0395905_0383411 | Ga0395905_0383411_377_970 | 197 |
| 37 | 3300044719 | Ga0466971_0319342 | Ga0466971_0319342_91_684 | 197 |
| 38 | 3300048905 | Ga0496102_0234323 | Ga0496102_0234323_1099_1692 | 197 |
| 39 | 3300049583 | Ga0501067_0062539 | Ga0501067_0062539_738_1331 | 197 |
| 40 | 3300050508 | nmdc:mga09592_31148_c1 | nmdc:mga09592_31148_c1_2937_3530 | 197 |
| 41 | 3300050509 | nmdc:mga0qj67_348469_c1 | nmdc:mga0qj67_348469_c1_351_944 | 197 |
| 42 | 3300050510 | nmdc:mga06r32_218542_c1 | nmdc:mga06r32_218542_c1_1138_1731 | 197 |
| 43 | 3300005471 | Ga0070698_100916463 | Ga0070698_1009164631 | 198 |
| 44 | 3300005983 | Ga0081540_1123062 | Ga0081540_11230622 | 198 |
| 45 | 3300037418 | Ga0395900_0507321 | Ga0395900_0507321_299_961 | 198 |
| 46 | 3300037466 | Ga0395898_0100018 | Ga0395898_0100018_1506_2168 | 198 |
| 47 | 3300048917 | Ga0496114_0023387 | Ga0496114_0023387_2873_3472 | 198 |
| 48 | iso_pu_bacteria | 2738543011 | 2739240069 | 198 |
| 49 | iso_pu_bacteria | 2939743619 | 2939746518 | 198 |
| 50 | 3300004798 | Ga0058859_11804537 | Ga0058859_118045371 | 199 |
| 51 | 3300006038 | Ga0075365_10012841 | Ga0075365_100128412 | 199 |
| 52 | 3300006042 | Ga0075368_10044312 | Ga0075368_100443122 | 199 |
| 53 | 3300006051 | Ga0075364_10016074 | Ga0075364_100160745 | 199 |
| 54 | 3300006177 | Ga0075362_10042256 | Ga0075362_100422562 | 199 |
| 55 | 3300006178 | Ga0075367_10119056 | Ga0075367_101190562 | 199 |
| 56 | 3300006186 | Ga0075369_10016613 | Ga0075369_100166132 | 199 |
| 57 | 3300006195 | Ga0075366_10293611 | Ga0075366_102936111 | 199 |
| 58 | 3300006353 | Ga0075370_10098931 | Ga0075370_100989312 | 199 |
| 59 | 3300026095 | Ga0207676_11083001 | Ga0207676_110830012 | 199 |
| 60 | 3300050489 | nmdc:mga03683_235457_c1 | nmdc:mga03683_235457_c1_144_743 | 199 |
| 61 | 3300050490 | nmdc:mga03n38_105954_c1 | nmdc:mga03n38_105954_c1_692_1291 | 199 |
| 62 | 3300050492 | nmdc:mga0yw44_24882_c1 | nmdc:mga0yw44_24882_c1_1597_2196 | 199 |
| 63 | 3300050494 | nmdc:mga06z11_151253_c1 | nmdc:mga06z11_151253_c1_657_1256 | 199 |
| 64 | 3300050510 | nmdc:mga06r32_983204_c1 | nmdc:mga06r32_983204_c1_36_635 | 199 |
| 65 | 3300050516 | nmdc:mga0sz30_24222_c1 | nmdc:mga0sz30_24222_c1_53_652 | 199 |
| 66 | 3300005331 | Ga0070670_100466094 | Ga0070670_1004660941 | 200 |
| 67 | 3300005333 | Ga0070677_10072439 | Ga0070677_100724392 | 200 |
| 68 | 3300005347 | Ga0070668_100337718 | Ga0070668_1003377182 | 200 |
| 69 | 3300005353 | Ga0070669_100159224 | Ga0070669_1001592242 | 200 |
| 70 | 3300005354 | Ga0070675_100202523 | Ga0070675_1002025232 | 200 |
| 71 | 3300005367 | Ga0070667_101210135 | Ga0070667_1012101351 | 200 |
| 72 | 3300005445 | Ga0070708_100412370 | Ga0070708_1004123702 | 200 |
| 73 | 3300005455 | Ga0070663_100758882 | Ga0070663_1007588822 | 200 |
| 74 | 3300005548 | Ga0070665_101228528 | Ga0070665_1012285281 | 200 |
| 75 | 3300005843 | Ga0068860_100235917 | Ga0068860_1002359172 | 200 |
| 76 | 3300006038 | Ga0075365_10024874 | Ga0075365_100248743 | 200 |
| 77 | 3300006038 | Ga0075365_10446642 | Ga0075365_104466421 | 200 |
| 78 | 3300006177 | Ga0075362_10181088 | Ga0075362_101810882 | 200 |
| 79 | 3300006358 | Ga0068871_100237303 | Ga0068871_1002373032 | 200 |
| 80 | 3300009177 | Ga0105248_10807268 | Ga0105248_108072681 | 200 |
| 81 | 3300014325 | Ga0163163_10207401 | Ga0163163_102074011 | 200 |
| 82 | 3300014326 | Ga0157380_10178818 | Ga0157380_101788182 | 200 |
| 83 | 3300014326 | Ga0157380_11386484 | Ga0157380_113864841 | 200 |
| 84 | 3300014968 | Ga0157379_11403323 | Ga0157379_114033231 | 200 |
| 85 | 3300022467 | Ga0224712_10227096 | Ga0224712_102270961 | 200 |
| 86 | 3300025901 | Ga0207688_10048575 | Ga0207688_100485752 | 200 |
| 87 | 3300025926 | Ga0207659_10773476 | Ga0207659_107734762 | 200 |
| 88 | 3300025937 | Ga0207669_10316200 | Ga0207669_103162002 | 200 |
| 89 | 3300025940 | Ga0207691_10401096 | Ga0207691_104010962 | 200 |
| 90 | 3300026067 | Ga0207678_10750561 | Ga0207678_107505611 | 200 |
| 91 | 3300026121 | Ga0207683_10088385 | Ga0207683_100883852 | 200 |
| 92 | 3300028379 | Ga0268266_11403346 | Ga0268266_114033461 | 200 |
| 93 | 3300028381 | Ga0268264_10124510 | Ga0268264_101245101 | 200 |
| 94 | 3300031456 | Ga0307513_10006259 | Ga0307513_100062592 | 200 |
| 95 | 3300046461 | Ga0495641_0224365 | Ga0495641_0224365_25_627 | 200 |
| 96 | 3300047321 | Ga0495676_0463466 | Ga0495676_0463466_202_804 | 200 |
| 97 | 3300048917 | Ga0496114_0247023 | Ga0496114_0247023_723_1325 | 200 |
| 98 | 3300050489 | nmdc:mga03683_255679_c1 | nmdc:mga03683_255679_c1_42_644 | 200 |
| 99 | 3300050489 | nmdc:mga03683_405134_c1 | nmdc:mga03683_405134_c1_33_635 | 200 |
| 100 | 3300050491 | nmdc:mga00v17_152666_c1 | nmdc:mga00v17_152666_c1_739_1341 | 200 |
| 101 | 3300050491 | nmdc:mga00v17_461379_c1 | nmdc:mga00v17_461379_c1_201_806 | 200 |
| 102 | 3300050492 | nmdc:mga0yw44_47134_c1 | nmdc:mga0yw44_47134_c1_904_1506 | 200 |
| 103 | 3300050492 | nmdc:mga0yw44_639734_c1 | nmdc:mga0yw44_639734_c1_73_675 | 200 |
| 104 | iso_pu_bacteria | 2523231044 | 2523383577 | 200 |
| 105 | 3300005337 | Ga0070682_100600908 | Ga0070682_1006009081 | 201 |
| 106 | 3300005535 | Ga0070684_100283433 | Ga0070684_1002834332 | 201 |
| 107 | 3300005616 | Ga0068852_100227468 | Ga0068852_1002274682 | 201 |
| 108 | 3300006353 | Ga0075370_10207615 | Ga0075370_102076152 | 201 |
| 109 | 3300006844 | Ga0075428_100606765 | Ga0075428_1006067652 | 201 |
| 110 | 3300009098 | Ga0105245_10184713 | Ga0105245_101847132 | 201 |
| 111 | 3300011119 | Ga0105246_10548082 | Ga0105246_105480822 | 201 |
| 112 | 3300026121 | Ga0207683_10899360 | Ga0207683_108993601 | 201 |
| 113 | 3300026142 | Ga0207698_10259514 | Ga0207698_102595142 | 201 |
| 114 | 3300031911 | Ga0307412_10729509 | Ga0307412_107295091 | 201 |
| 115 | 3300032126 | Ga0307415_100577736 | Ga0307415_1005777362 | 201 |
| 116 | 3300041452 | Ga0451793_1868869 | Ga0451793_1868869_1503_2114 | 201 |
| 117 | 3300041460 | Ga0451802_0045714 | Ga0451802_0045714_240_845 | 201 |
| 118 | 3300041512 | Ga0451853_1323847 | Ga0451853_1323847_210_815 | 201 |
| 119 | 3300041512 | Ga0451853_2217513 | Ga0451853_2217513_508_1119 | 201 |
| 120 | 3300046472 | Ga0495580_0536831 | Ga0495580_0536831_135_740 | 201 |
| 121 | 3300047315 | Ga0495581_0035407 | Ga0495581_0035407_1687_2292 | 201 |
| 122 | 3300048908 | Ga0496105_0092454 | Ga0496105_0092454_1605_2210 | 201 |
| 123 | 3300048911 | Ga0496108_0035510 | Ga0496108_0035510_3244_3849 | 201 |
| 124 | 3300048912 | Ga0496109_0256092 | Ga0496109_0256092_569_1174 | 201 |
| 125 | 3300048913 | Ga0496110_0022750 | Ga0496110_0022750_2334_2939 | 201 |
| 126 | 3300048916 | Ga0496113_0170843 | Ga0496113_0170843_31_636 | 201 |
| 127 | 3300048917 | Ga0496114_0003986 | Ga0496114_0003986_1260_1865 | 201 |
| 128 | 3300048917 | Ga0496114_0105831 | Ga0496114_0105831_1078_1683 | 201 |
| 129 | 3300050491 | nmdc:mga00v17_258739_c1 | nmdc:mga00v17_258739_c1_27_635 | 201 |
| 130 | 3300053151 | Ga0500604_0077237 | Ga0500604_0077237_411_1019 | 201 |
| 131 | 3300001990 | JGI24737J22298_10095267 | JGI24737J22298_100952671 | 202 |
| 132 | 3300004799 | Ga0058863_10027882 | Ga0058863_100278821 | 202 |
| 133 | 3300004801 | Ga0058860_11846751 | Ga0058860_118467511 | 202 |
| 134 | 3300004803 | Ga0058862_10057022 | Ga0058862_100570221 | 202 |
| 135 | 3300005329 | Ga0070683_100347950 | Ga0070683_1003479501 | 202 |
| 136 | 3300005329 | Ga0070683_100640330 | Ga0070683_1006403302 | 202 |
| 137 | 3300005435 | Ga0070714_100000007 | Ga0070714_100000007125 | 202 |
| 138 | 3300005530 | Ga0070679_100989962 | Ga0070679_1009899621 | 202 |
| 139 | 3300005548 | Ga0070665_101160421 | Ga0070665_1011604211 | 202 |
| 140 | 3300006048 | Ga0075363_100012925 | Ga0075363_1000129252 | 202 |
| 141 | 3300006353 | Ga0075370_10018276 | Ga0075370_100182763 | 202 |
| 142 | 3300006881 | Ga0068865_100866840 | Ga0068865_1008668402 | 202 |
| 143 | 3300009148 | Ga0105243_10023897 | Ga0105243_100238973 | 202 |
| 144 | 3300013062 | Ga0154010_134934 | Ga0154010_1349342 | 202 |
| 145 | 3300013105 | Ga0157369_10488300 | Ga0157369_104883002 | 202 |
| 146 | 3300020069 | Ga0197907_10096707 | Ga0197907_100967072 | 202 |
| 147 | 3300020069 | Ga0197907_11150377 | Ga0197907_111503771 | 202 |
| 148 | 3300020070 | Ga0206356_10037073 | Ga0206356_100370731 | 202 |
| 149 | 3300020070 | Ga0206356_10709812 | Ga0206356_107098123 | 202 |
| 150 | 3300020070 | Ga0206356_11048329 | Ga0206356_110483291 | 202 |
| 151 | 3300020075 | Ga0206349_1149093 | Ga0206349_11490932 | 202 |
| 152 | 3300020075 | Ga0206349_1390681 | Ga0206349_13906812 | 202 |
| 153 | 3300020076 | Ga0206355_1384735 | Ga0206355_13847351 | 202 |
| 154 | 3300020076 | Ga0206355_1470291 | Ga0206355_14702912 | 202 |
| 155 | 3300020077 | Ga0206351_10198140 | Ga0206351_101981401 | 202 |
| 156 | 3300020077 | Ga0206351_10392129 | Ga0206351_103921293 | 202 |
| 157 | 3300020078 | Ga0206352_10416012 | Ga0206352_104160121 | 202 |
| 158 | 3300020078 | Ga0206352_10695678 | Ga0206352_106956781 | 202 |
| 159 | 3300020080 | Ga0206350_10745872 | Ga0206350_107458724 | 202 |
| 160 | 3300020080 | Ga0206350_10915587 | Ga0206350_109155873 | 202 |
| 161 | 3300020081 | Ga0206354_10316994 | Ga0206354_103169942 | 202 |
| 162 | 3300020081 | Ga0206354_10404610 | Ga0206354_104046103 | 202 |
| 163 | 3300020081 | Ga0206354_11686715 | Ga0206354_116867151 | 202 |
| 164 | 3300020082 | Ga0206353_11013320 | Ga0206353_110133203 | 202 |
| 165 | 3300020082 | Ga0206353_11934766 | Ga0206353_119347661 | 202 |
| 166 | 3300020610 | Ga0154015_1105311 | Ga0154015_11053111 | 202 |
| 167 | 3300020610 | Ga0154015_1651667 | Ga0154015_16516672 | 202 |
| 168 | 3300025904 | Ga0207647_10131195 | Ga0207647_101311951 | 202 |
| 169 | 3300025929 | Ga0207664_10000014 | Ga0207664_10000014107 | 202 |
| 170 | 3300025935 | Ga0207709_10078375 | Ga0207709_100783753 | 202 |
| 171 | 3300025944 | Ga0207661_10296603 | Ga0207661_102966033 | 202 |
| 172 | 3300031665 | Ga0316575_10004501 | Ga0316575_100045013 | 202 |
| 173 | 3300031691 | Ga0316579_10000707 | Ga0316579_100007072 | 202 |
| 174 | 3300031727 | Ga0316576_10012729 | Ga0316576_100127292 | 202 |
| 175 | 3300031728 | Ga0316578_10006796 | Ga0316578_100067963 | 202 |
| 176 | 3300032137 | Ga0316585_10017146 | Ga0316585_100171462 | 202 |
| 177 | 3300035398 | Ga0316574_0055380 | Ga0316574_0055380_797_1405 | 202 |
| 178 | 3300036647 | Ga0316582_0063715 | Ga0316582_0063715_696_1304 | 202 |
| 179 | 3300036712 | Ga0316584_0003519 | Ga0316584_0003519_5646_6254 | 202 |
| 180 | 3300041512 | Ga0451853_2657413 | Ga0451853_2657413_633_1244 | 202 |
| 181 | 3300044684 | Ga0466966_0012696 | Ga0466966_0012696_2200_2808 | 202 |
| 182 | 3300044693 | Ga0466961_0066779 | Ga0466961_0066779_16_624 | 202 |
| 183 | 3300045049 | Ga0466959_0094830 | Ga0466959_0094830_620_1228 | 202 |
| 184 | 3300046475 | Ga0495639_0360030 | Ga0495639_0360030_102_710 | 202 |
| 185 | 3300046477 | Ga0495664_0171812 | Ga0495664_0171812_25_633 | 202 |
| 186 | 3300046511 | Ga0495608_0049259 | Ga0495608_0049259_598_1206 | 202 |
| 187 | 3300046531 | Ga0495665_0007599 | Ga0495665_0007599_563_1171 | 202 |
| 188 | 3300046559 | Ga0495667_0046474 | Ga0495667_0046474_1567_2175 | 202 |
| 189 | 3300046663 | Ga0495635_0137780 | Ga0495635_0137780_416_1024 | 202 |
| 190 | 3300046809 | Ga0495600_0219954 | Ga0495600_0219954_424_1032 | 202 |
| 191 | 3300047315 | Ga0495581_0171651 | Ga0495581_0171651_281_889 | 202 |
| 192 | 3300047319 | Ga0495674_0105954 | Ga0495674_0105954_489_1097 | 202 |
| 193 | 3300048903 | Ga0496100_0008743 | Ga0496100_0008743_4810_5421 | 202 |
| 194 | 3300048904 | Ga0496101_0116689 | Ga0496101_0116689_1140_1751 | 202 |
| 195 | 3300048905 | Ga0496102_0023340 | Ga0496102_0023340_2243_2854 | 202 |
| 196 | 3300048905 | Ga0496102_0190130 | Ga0496102_0190130_645_1256 | 202 |
| 197 | 3300048907 | Ga0496104_0010036 | Ga0496104_0010036_2019_2630 | 202 |
| 198 | 3300048909 | Ga0496106_0077811 | Ga0496106_0077811_217_828 | 202 |
| 199 | 3300048910 | Ga0496107_0104779 | Ga0496107_0104779_40_651 | 202 |
| 200 | 3300048917 | Ga0496114_0002208 | Ga0496114_0002208_4465_5076 | 202 |
| 201 | 3300048917 | Ga0496114_0046184 | Ga0496114_0046184_2545_3156 | 202 |
| 202 | 3300050490 | nmdc:mga03n38_52082_c1 | nmdc:mga03n38_52082_c1_632_1243 | 202 |
| 203 | 3300050496 | nmdc:mga07m45_131379_c1 | nmdc:mga07m45_131379_c1_420_1100 | 202 |
| 204 | 3300053085 | Ga0495619_0744917 | Ga0495619_0744917_12_620 | 202 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3bm7-assembly1.cif.gz_A-2 | crystal structure of a putative antibiotic biosynthesis monooxygenase (cc_2132) from caulobacter crescentus cb15 at 1.35 a resolution | 0.8762 | 2 | 90 |
| 1iuj-assembly1.cif.gz_B | the structure of tt1380 protein from thermus thermophilus | 0.8424 | 1 | 87 |
| 3kng-assembly1.cif.gz_B | crystal structure of snoab, a cofactor-independent oxygenase from streptomyces nogalater, determined to 1.9 resolution | 0.8404 | 2 | 86 |
| 7bio-assembly1.cif.gz_A | crystal structure of monooxygenase rslo4 from streptomyces bottropensis | 0.8216 | 2 | 85 |
| 3kg1-assembly3.cif.gz_A-2 | crystal structure of snoab, a cofactor-independent oxygenase from streptomyces nogalater, mutant n63a | 0.8175 | 2 | 86 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q54J03_9_103_3.30.70.100 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; | 0.8374 | 2 | 90 | 3.30.70.100 |
| 3bm7A00 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; | 0.8361 | 2 | 90 | 3.30.70.100 |
| 1iujA00 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; | 0.8284 | 1 | 87 | 3.30.70.100 |
| af_A0A1D8PRM8_52_147_3.30.70.100 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; | 0.824 | 2 | 90 | 3.30.70.100 |
| af_E9AHE7_20_126_3.30.70.100 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; | 0.8199 | 2 | 90 | 3.30.70.100 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-K6W8U8-F1-model_v4 | ABM domain-containing protein | 0.993 | 2 | 199 |
|
| AF-F6EKV2-F1-model_v4 | ABM domain-containing protein | 0.9858 | 2 | 200 |
|
| AF-X0PQ20-F1-model_v4 | ABM domain-containing protein | 0.9852 | 2 | 202 |
|
| AF-A0A538ER94-F1-model_v4 | ABM domain-containing protein | 0.9783 | 1 | 138 |
|
| AF-X0PQ20-F1-model_v4 | ABM domain-containing protein | 0.9756 | 2 | 202 |
|
Predicted Structure (AlphaFold2)
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