F312376

General Info

Members Datasets Scaffolds Average Seq Length
204 162 408 347

Family's Representative Sequence

Representative Sequence 3300006847|Ga0075431_100280595|Ga0075431_1002805952
Length 380
Sequence MSTSGGWVGEDGRNGDSASAAAGPSTSEKPAGTAGYGLAGTPDLLLSVRGLVKHFPITKGILRRRVGAVKAVDGIDFDVHKGSTLGLVGESGCGKTTTGRMLTRLLEPSAGSIVFEGVDITHMSQGRLRPLRRDMQMIFQDPYSSLNPRHTVGTIVGSPFRIQNIKTERGIKREVQDLLELVGLNPEHYNRYPHEFSGGQRQRIGIARTLALRPKLIIADEPVSALDVSIQAQVVNLLDDLQHELGLTYVVIAHDLSVVRHISDRVAVMYLGKIVELADRDTLYAEPMHPYTNALISAVPVPDPKRRDRARRERILLTGDVPSPINPPSGCRFRTRCWKAQEICSTQEPPLAPGPSAASGHVVACHFPVLKSDPAVPAPR

Samples

Sample ID Description Type Environment
1 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
11 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
12 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
13 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
14 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
18 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
20 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
21 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
22 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
36 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
37 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
38 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
39 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
40 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
41 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
42 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
43 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
44 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
45 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
46 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
47 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
48 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
49 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
50 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
51 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
52 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
53 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
54 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
55 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
56 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
59 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
60 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
61 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
62 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
63 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
64 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
65 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
68 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
69 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
70 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
71 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
72 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
73 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
74 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
75 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
76 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
77 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
78 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
79 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
80 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
81 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
82 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
83 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
84 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
85 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
86 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
87 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
88 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
89 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
90 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
91 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
92 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
93 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
94 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
95 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
96 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
97 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
98 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
99 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
101 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
102 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
103 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
104 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
105 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
106 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
107 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
108 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
109 2501939600 Micromonospora sp. L5 Isolate Unclassified
110 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
111 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
112 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
113 2643221548 Streptomyces sp. Root55 Isolate Unclassified
114 2643221647 Streptomyces sp. Root369 Isolate Unclassified
115 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
116 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
117 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
118 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
119 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
120 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
121 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
122 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
123 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
124 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
125 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
126 2855683550 Micromonospora sp. RP3T Isolate Unclassified
127 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
128 2858868258 Micromonospora sp. MH33 Isolate Unclassified
129 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
130 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
131 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
132 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
133 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
134 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
135 2902582711 Micromonospora sp. AP08 Isolate Unclassified
136 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
137 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
138 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
139 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
140 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
141 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
142 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
143 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
144 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
145 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
146 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
147 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
148 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
149 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
150 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
151 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
152 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
153 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
154 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
155 649633069 Micromonospora sp. L5 Isolate Unclassified
156 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
157 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
158 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
159 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
160 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
161 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
162 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 70.1
Metatranscriptomes 0
Isolates 29.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.45
Nodule 0.49
Rhizoplane 2.94
Rhizosphere 68.63
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075431_100280595 3300006847 Bacteria 1687
2 JGI25406J46586_10002378 3300003203 Bacteria 8891
3 JGI25406J46586_10003513 3300003203 Bacteria 7357
4 JGI25406J46586_10037981 3300003203 Bacteria 1730
5 Ga0070668_100000256 3300005347 Bacteria 35240
6 Ga0070668_100019205 3300005347 Bacteria 5142
7 Ga0070710_10000419 3300005437 Bacteria 19984
8 Ga0070706_100320437 3300005467 Bacteria 1446
9 Ga0070707_100015919 3300005468 Bacteria 7059
10 Ga0070698_100021655 3300005471 Bacteria 6730
11 Ga0070699_100025749 3300005518 Bacteria 5070
12 Ga0070665_100012969 3300005548 Bacteria 8394
13 Ga0068863_100010098 3300005841 Bacteria 9182
14 Ga0068860_100053877 3300005843 Bacteria 3824
15 Ga0081540_1004474 3300005983 Bacteria 10638
16 Ga0081539_10000086 3300005985 Bacteria 217801
17 Ga0081539_10000506 3300005985 Bacteria 81319
18 Ga0081539_10000678 3300005985 Bacteria 68256
19 Ga0075370_10004776 3300006353 Bacteria 6632
20 Ga0075428_100091566 3300006844 Bacteria 3316
21 Ga0075428_100095786 3300006844 Bacteria 3235
22 Ga0075428_100211108 3300006844 Bacteria 2098
23 Ga0075430_100000573 3300006846 Bacteria 27919
24 Ga0075430_100133031 3300006846 Bacteria 2073
25 Ga0075430_100177422 3300006846 Bacteria 1772
26 Ga0075430_100336124 3300006846 Bacteria 1248
27 Ga0075431_100058350 3300006847 Bacteria 3983
28 Ga0075431_100172100 3300006847 Bacteria 2225
29 Ga0075429_100073692 3300006880 Bacteria 2973
30 Ga0114129_10000504 3300009147 Bacteria 47606
31 Ga0114129_10004802 3300009147 Bacteria 19106
32 Ga0114129_10276229 3300009147 Bacteria 2246
33 Ga0114129_10658284 3300009147 Bacteria 1351
34 Ga0163163_10004791 3300014325 Bacteria 11613
35 Ga0213875_10001293 3300021388 Bacteria 16668
36 Ga0207426_1008811 3300025302 Bacteria 4039
37 Ga0207692_10000582 3300025898 Bacteria 12969
38 Ga0207684_10084864 3300025910 Bacteria 2697
39 Ga0207646_10015926 3300025922 Bacteria 7070
40 Ga0207681_10168069 3300025923 Bacteria 1660
41 Ga0207661_10051585 3300025944 Bacteria 3283
42 Ga0207668_10000883 3300025972 Bacteria 18098
43 Ga0207678_10282880 3300026067 Bacteria 1424
44 Ga0207702_10115650 3300026078 Bacteria 2392
45 Ga0207676_10239223 3300026095 Bacteria 1628
46 Ga0207674_10144714 3300026116 Bacteria 2336
47 Ga0207675_100126913 3300026118 Bacteria 2417
48 Ga0268265_10230900 3300028380 Bacteria 1626
49 Ga0268264_10116199 3300028381 Bacteria 2351
50 Ga0307515_10000083 3300028794 Bacteria 222889
51 Ga0307515_10001066 3300028794 Bacteria 62806
52 Ga0265338_10005976 3300028800 Bacteria 15658
53 Ga0307511_10001538 3300030521 Bacteria 24402
54 Ga0316176_1173485 3300030732 Bacteria 2810
55 Ga0314311_1067463 3300030733 Bacteria 10542
56 Ga0316178_1108065 3300030735 Bacteria 1517
57 Ga0265340_10003530 3300031247 Bacteria 8797
58 Ga0265339_10004981 3300031249 Bacteria 8944
59 Ga0265316_10116052 3300031344 Bacteria 2024
60 Ga0307513_10276534 3300031456 Bacteria 1459
61 Ga0307513_10279402 3300031456 Bacteria 1448
62 Ga0307509_10039302 3300031507 Bacteria 5156
63 Ga0307508_10000829 3300031616 Bacteria 35940
64 Ga0265314_10067879 3300031711 Bacteria 2399
65 Ga0265342_10069117 3300031712 Bacteria 2063
66 Ga0307516_10000735 3300031730 Bacteria 44537
67 Ga0307516_10001166 3300031730 Bacteria 36810
68 Ga0307516_10039707 3300031730 Bacteria 4690
69 Ga0307516_10045754 3300031730 Bacteria 4321
70 Ga0307516_10081909 3300031730 Bacteria 3069
71 Ga0307405_10093822 3300031731 Bacteria 1995
72 Ga0307413_10000034 3300031824 Bacteria 34768
73 Ga0307518_10000551 3300031838 Bacteria 28562
74 Ga0307410_10007223 3300031852 Bacteria 6064
75 Ga0307410_10032004 3300031852 Bacteria 3380
76 Ga0307406_10216801 3300031901 Bacteria 1420
77 Ga0307412_10127356 3300031911 Bacteria 1844
78 Ga0307409_100039426 3300031995 Bacteria 3505
79 Ga0307416_100013101 3300032002 Bacteria 5623
80 Ga0307414_10029376 3300032004 Bacteria 3578
81 Ga0307411_10256169 3300032005 Bacteria 1379
82 Ga0307411_10381369 3300032005 Bacteria 1160
83 Ga0307415_100003264 3300032126 Bacteria 8240
84 Ga0307415_100050861 3300032126 Bacteria 2810
85 Ga0307507_10044798 3300033179 Bacteria 4365
86 Ga0307510_10076918 3300033180 Bacteria 3277
87 Ga0373955_0004222 3300035172 Bacteria 6341
88 Ga0395899_0010566 3300037312 Bacteria 7073
89 Ga0395900_0004575 3300037418 Bacteria 14598
90 Ga0395898_0005118 3300037466 Bacteria 14206
91 Ga0395905_0004016 3300037471 Bacteria 15443
92 Ga0436364_1326662 3300037853 Bacteria 39324
93 Ga0395901_0003859 3300038443 Bacteria 15079
94 Ga0451853_3298561 3300041512 Bacteria 1959
95 Ga0439449_0045748 3300042007 Bacteria 1622
96 Ga0450903_000372 3300042138 Bacteria 9762
97 Ga0439458_0000041 3300042157 Bacteria 20369
98 Ga0466969_0020109 3300044656 Bacteria 3460
99 Ga0466972_0008536 3300044658 Bacteria 5141
100 Ga0466965_0015464 3300044683 Bacteria 3625
101 Ga0466965_0111424 3300044683 Bacteria 1406
102 Ga0466961_0006227 3300044693 Bacteria 7581
103 Ga0466963_0058871 3300044694 Bacteria 2563
104 Ga0466971_0023196 3300044719 Bacteria 2765
105 Ga0466970_0107301 3300044765 Bacteria 1524
106 Ga0466957_0000612 3300044842 Bacteria 18009
107 Ga0466960_0005220 3300044901 Bacteria 5134
108 Ga0466959_0057077 3300045049 Bacteria 2847
109 Ga0466967_0029528 3300045976 Bacteria 4590
110 Ga0466967_0295694 3300045976 Bacteria 1557
111 Ga0495606_0003542 3300046507 Bacteria 16490
112 Ga0495668_0006749 3300046616 Bacteria 7464
113 Ga0495625_0007332 3300046660 Bacteria 9630
114 Ga0495649_0048218 3300046694 Bacteria 2315
115 Ga0495636_0010371 3300047318 Bacteria 3679
116 Ga0495683_0035943 3300047323 Bacteria 2517
117 Ga0495687_007792 3300047443 Bacteria 6234
118 Ga0495685_033559 3300047447 Bacteria 1763
119 Ga0495626_0001717 3300048091 Bacteria 16770
120 Ga0496102_0082194 3300048905 Bacteria 2971
121 Ga0496102_0153200 3300048905 Bacteria 2167
122 Ga0496104_0061980 3300048907 Bacteria 3546
123 Ga0496112_0060976 3300048915 Bacteria 3717
124 Ga0496112_0272539 3300048915 Bacteria 1640
125 Ga0496114_0000657 3300048917 Bacteria 25588
126 Ga0496126_0264279 3300048929 Bacteria 1430
127 Ga0501040_0164999 3300049576 Bacteria 1567
128 Ga0501047_0000076 3300049581 Bacteria 124949
129 nmdc:mga03n38_84834_c1 3300050490 Bacteria 1496
130 nmdc:mga07m45_33169_c1 3300050496 Bacteria 2867
131 nmdc:mga05p37_252630_c1 3300050507 Bacteria 1569
132 nmdc:mga05p37_59765_c1 3300050507 Bacteria 4694
133 nmdc:mga09592_100324_c1 3300050508 Bacteria 2479
134 nmdc:mga09592_257168_c1 3300050508 Bacteria 1514
135 nmdc:mga09592_60_c1 3300050508 Bacteria 18664
136 nmdc:mga0qj67_147_c1 3300050509 Bacteria 48010
137 nmdc:mga0qj67_218468_c1 3300050509 Bacteria 1547
138 nmdc:mga0qj67_2_c1 3300050509 Bacteria 181700
139 nmdc:mga0qj67_72582_c1 3300050509 Bacteria 2748
140 nmdc:mga06r32_1_c1 3300050510 Bacteria 147976
141 nmdc:mga06r32_266869_c1 3300050510 Bacteria 1699
142 Ga0500579_142583 3300053143 Bacteria 1076
143 Ga0530510_0283261 3300061734 Bacteria 1238
144 2501945387 2501939600 Bacteria 6907073
145 2501945883 2501939600 Bacteria 6907073
146 2554256460 2554235005 Bacteria 6457341
147 2586058202 2585427649 Bacteria 9053857
148 2623591672 2622736626 Bacteria 7181580
149 2623591702 2622736626 Bacteria 7181580
150 2643763759 2643221548 Bacteria 8053412
151 2644263318 2643221647 Bacteria 10741251
152 2644461806 2643221682 Bacteria 6743283
153 2753262791 2751185782 Bacteria 11227053
154 2768646601 2767802112 Bacteria 6465194
155 2786667652 2786546132 Bacteria 10419719
156 2795795343 2795385472 Bacteria 6627535
157 2809592956 2808606522 Bacteria 9488490
158 2811844704 2808606982 Bacteria 7791042
159 2812360853 2811994879 Bacteria 9313447
160 2819740856 2818991472 Bacteria 10089953
161 2831940982 2831935698 Bacteria 5963223
162 2852639415 2852635781 Bacteria 8251373
163 2855685939 2855683550 Bacteria 7134265
164 2856858737 2856858025 Bacteria 7255264
165 2856858752 2856858025 Bacteria 7255264
166 2858873436 2858868258 Bacteria 7683772
167 2858875194 2858868258 Bacteria 7683772
168 2862710910 2862705112 Bacteria 6563286
169 2867316558 2867312974 Bacteria 7058875
170 2867321752 2867319477 Bacteria 7069771
171 2867512052 2867507094 Bacteria 6506033
172 2887485798 2887478801 Bacteria 8972725
173 2891328096 2891326441 Bacteria 6439512
174 2902583626 2902582711 Bacteria 6187705
175 2902583642 2902582711 Bacteria 6187705
176 2915768223 2915768154 Bacteria 8424322
177 2917739870 2917736166 Bacteria 9690793
178 2946065017 2946064051 Bacteria 8957905
179 2947232417 2947224130 Bacteria 9938529
180 2954389274 2954380949 Bacteria 10050426
181 2954673791 2954673503 Bacteria 9685905
182 2954690199 2954682443 Bacteria 9862841
183 2954700051 2954691527 Bacteria 10720516
184 2954702169 2954701450 Bacteria 10834262
185 2954718875 2954711539 Bacteria 10867210
186 2954728845 2954721474 Bacteria 10456478
187 2954732967 2954731030 Bacteria 10243860
188 2954747744 2954740390 Bacteria 10229294
189 2954751845 2954749733 Bacteria 10366972
190 2990048463 2990044586 Bacteria 6603797
191 2995467052 2995463766 Bacteria 8577691
192 2996223843 2996221748 Bacteria 6799777
193 2997452959 2997451912 Bacteria 8492419
194 3006430123 3006425503 Bacteria 6491253
195 649810648 649633069 Bacteria 6962533
196 649810662 649633069 Bacteria 6962533
197 8001783015 8001781756 Bacteria 9586736
198 8001785067 8001781756 Bacteria 9586736
199 8003831550 8003830390 Bacteria 6541657
200 8003858443 8003856774 Bacteria 7675274
201 8025530559 8025524527 Bacteria 7197316
202 8047715249 8047710418 Bacteria 11023148
203 8048135722 8048127548 Bacteria 11053136
204 8055418675 8055412473 Bacteria 6257500
205 Ga0075431_100280595
206 JGI25406J46586_10002378
207 JGI25406J46586_10003513
208 JGI25406J46586_10037981
209 Ga0070668_100000256
210 Ga0070668_100019205
211 Ga0070710_10000419
212 Ga0070706_100320437
213 Ga0070707_100015919
214 Ga0070698_100021655
215 Ga0070699_100025749
216 Ga0070665_100012969
217 Ga0068863_100010098
218 Ga0068860_100053877
219 Ga0081540_1004474
220 Ga0081539_10000086
221 Ga0081539_10000506
222 Ga0081539_10000678
223 Ga0075370_10004776
224 Ga0075428_100091566
225 Ga0075428_100095786
226 Ga0075428_100211108
227 Ga0075430_100000573
228 Ga0075430_100133031
229 Ga0075430_100177422
230 Ga0075430_100336124
231 Ga0075431_100058350
232 Ga0075431_100172100
233 Ga0075429_100073692
234 Ga0114129_10000504
235 Ga0114129_10004802
236 Ga0114129_10276229
237 Ga0114129_10658284
238 Ga0163163_10004791
239 Ga0213875_10001293
240 Ga0207426_1008811
241 Ga0207692_10000582
242 Ga0207684_10084864
243 Ga0207646_10015926
244 Ga0207681_10168069
245 Ga0207661_10051585
246 Ga0207668_10000883
247 Ga0207678_10282880
248 Ga0207702_10115650
249 Ga0207676_10239223
250 Ga0207674_10144714
251 Ga0207675_100126913
252 Ga0268265_10230900
253 Ga0268264_10116199
254 Ga0307515_10000083
255 Ga0307515_10001066
256 Ga0265338_10005976
257 Ga0307511_10001538
258 Ga0316176_1173485
259 Ga0314311_1067463
260 Ga0316178_1108065
261 Ga0265340_10003530
262 Ga0265339_10004981
263 Ga0265316_10116052
264 Ga0307513_10276534
265 Ga0307513_10279402
266 Ga0307509_10039302
267 Ga0307508_10000829
268 Ga0265314_10067879
269 Ga0265342_10069117
270 Ga0307516_10000735
271 Ga0307516_10001166
272 Ga0307516_10039707
273 Ga0307516_10045754
274 Ga0307516_10081909
275 Ga0307405_10093822
276 Ga0307413_10000034
277 Ga0307518_10000551
278 Ga0307410_10007223
279 Ga0307410_10032004
280 Ga0307406_10216801
281 Ga0307412_10127356
282 Ga0307409_100039426
283 Ga0307416_100013101
284 Ga0307414_10029376
285 Ga0307411_10256169
286 Ga0307411_10381369
287 Ga0307415_100003264
288 Ga0307415_100050861
289 Ga0307507_10044798
290 Ga0307510_10076918
291 Ga0373955_0004222
292 Ga0395899_0010566
293 Ga0395900_0004575
294 Ga0395898_0005118
295 Ga0395905_0004016
296 Ga0436364_1326662
297 Ga0395901_0003859
298 Ga0451853_3298561
299 Ga0439449_0045748
300 Ga0450903_000372
301 Ga0439458_0000041
302 Ga0466969_0020109
303 Ga0466972_0008536
304 Ga0466965_0015464
305 Ga0466965_0111424
306 Ga0466961_0006227
307 Ga0466963_0058871
308 Ga0466971_0023196
309 Ga0466970_0107301
310 Ga0466957_0000612
311 Ga0466960_0005220
312 Ga0466959_0057077
313 Ga0466967_0029528
314 Ga0466967_0295694
315 Ga0495606_0003542
316 Ga0495668_0006749
317 Ga0495625_0007332
318 Ga0495649_0048218
319 Ga0495636_0010371
320 Ga0495683_0035943
321 Ga0495687_007792
322 Ga0495685_033559
323 Ga0495626_0001717
324 Ga0496102_0082194
325 Ga0496102_0153200
326 Ga0496104_0061980
327 Ga0496112_0060976
328 Ga0496112_0272539
329 Ga0496114_0000657
330 Ga0496126_0264279
331 Ga0501040_0164999
332 Ga0501047_0000076
333 nmdc:mga03n38_84834_c1
334 nmdc:mga07m45_33169_c1
335 nmdc:mga05p37_252630_c1
336 nmdc:mga05p37_59765_c1
337 nmdc:mga09592_100324_c1
338 nmdc:mga09592_257168_c1
339 nmdc:mga09592_60_c1
340 nmdc:mga0qj67_147_c1
341 nmdc:mga0qj67_218468_c1
342 nmdc:mga0qj67_2_c1
343 nmdc:mga0qj67_72582_c1
344 nmdc:mga06r32_1_c1
345 nmdc:mga06r32_266869_c1
346 Ga0500579_142583
347 Ga0530510_0283261
348 2501945387
349 2501945883
350 2554256460
351 2586058202
352 2623591672
353 2623591702
354 2643763759
355 2644263318
356 2644461806
357 2753262791
358 2768646601
359 2786667652
360 2795795343
361 2809592956
362 2811844704
363 2812360853
364 2819740856
365 2831940982
366 2852639415
367 2855685939
368 2856858737
369 2856858752
370 2858873436
371 2858875194
372 2862710910
373 2867316558
374 2867321752
375 2867512052
376 2887485798
377 2891328096
378 2902583626
379 2902583642
380 2915768223
381 2917739870
382 2946065017
383 2947232417
384 2954389274
385 2954673791
386 2954690199
387 2954700051
388 2954702169
389 2954718875
390 2954728845
391 2954732967
392 2954747744
393 2954751845
394 2990048463
395 2995467052
396 2996223843
397 2997452959
398 3006430123
399 649810648
400 649810662
401 8001783015
402 8001785067
403 8003831550
404 8003858443
405 8025530559
406 8047715249
407 8048135722
408 8055418675

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

72

224

0.93

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

275

344

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cad-assembly1.cif.gz_D mycobacterium smegmatis sugabc complex 0.9375 5 258
8ja7-assembly1.cif.gz_D cryo-em structure of mycobacterium tuberculosis lpqy-sugabc in complex with trehalose 0.9364 4 260
7z17-assembly1.cif.gz_J e. coli c-p lyase bound to a phnk abc dimer in an open conformation 0.9352 3 262
7z19-assembly1.cif.gz_I e. coli c-p lyase bound to a single phnk abc domain 0.9348 3 262
7w7a-assembly2.cif.gz_E heme exporter in complex with mn-containing protoporphyrin ix, mn-anomalous data 0.9343 5 235
ID Description Score Start End Superfamily
af_P33916_272_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9677 2 261 3.40.50.300
af_Q2FZR0_1_324_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9667 2 325 3.40.50.300
af_P37313_10_333_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9654 3 323 3.40.50.300
af_P33916_272_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.964 2 261 3.40.50.300
af_P77737_9_333_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.961 3 327 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A0M8U813-F1-model_v4 deleted 0.9744 1 210
AF-A0A2N1WD50-F1-model_v4 deleted 0.9714 3 228
AF-A0A0M8U813-F1-model_v4 deleted 0.9698 1 210
AF-A0A2N6MPE8-F1-model_v4 deleted 0.9604 5 249
AF-A0A383F2Y9-F1-model_v4 ABC transporter domain-containing protein 0.9561 30 245 GO:0005524
GO:0016887

Map