F311904

General Info

Members Datasets Scaffolds Average Seq Length
203 140 406 204

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2818991472|2819739004
Length 242
Sequence RRGNVGPESGPDTESEGAAQPQHYFSADPAVESARTSIEISARGVTLELQTDVGVFSAGKLDKGTRILLQHVPPPPNRGRYLDLGCGYGPIATTMAATRRRAEVWAVDINNRALELVRDNSARAGLKNVKACRPEEVPQGLEFDFIYSNPPIRIGKAALHELLLKWLPRLTPDGAAFMVVQRNLGSDSLAKWLNEQGFPTERLISREGFRILRTTRPREAVGSDPEASAAPEAPSAPEKTAG

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
40 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
41 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
61 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
62 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
63 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
64 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
65 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
66 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
67 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
68 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
69 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
70 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
73 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
74 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
75 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
76 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
77 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
78 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
79 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
80 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
81 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
82 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
83 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
84 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
85 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
86 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
87 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
88 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
89 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
90 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
91 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
92 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
93 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
94 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
95 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
96 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
97 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
98 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
99 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
110 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
111 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
112 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
113 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
114 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
115 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
116 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
117 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
118 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
119 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
120 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
123 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
124 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
125 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
126 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
127 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
130 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
131 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
132 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
133 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
134 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
135 2558860280 Kutzneria sp. 744 Isolate Unclassified
136 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
137 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
138 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
139 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
140 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.55
Metatranscriptomes 0
Isolates 3.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.49
Nodule 0
Rhizoplane 1.97
Rhizosphere 89.16
Stem 0
Stem Tuber 0
Unclassified 2.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10009513 3300003373 Bacteria 2464
2 Ga0070658_10000949 3300005327 Bacteria 24773
3 Ga0068868_100309671 3300005338 Bacteria 1343
4 Ga0070714_100048402 3300005435 Bacteria 3615
5 Ga0070714_100529363 3300005435 Bacteria 1126
6 Ga0070713_100186594 3300005436 Bacteria 1866
7 Ga0070711_100033095 3300005439 Bacteria 3441
8 Ga0070678_100602317 3300005456 Bacteria 981
9 Ga0070706_100000025 3300005467 Bacteria 156371
10 Ga0068855_100013190 3300005563 Bacteria 9969
11 Ga0068854_100564222 3300005578 Bacteria 967
12 Ga0068856_100345172 3300005614 Bacteria 1507
13 Ga0070702_100002085 3300005615 Bacteria 8476
14 Ga0070702_100023009 3300005615 Bacteria 3304
15 Ga0068852_100052149 3300005616 Bacteria 3515
16 Ga0068851_10182646 3300005834 Bacteria 1162
17 Ga0081455_10000409 3300005937 Bacteria 56312
18 Ga0081455_10012792 3300005937 Bacteria 8339
19 Ga0081455_10487573 3300005937 Bacteria 831
20 Ga0081538_10000088 3300005981 Bacteria 88922
21 Ga0081538_10004785 3300005981 Bacteria 12369
22 Ga0081538_10045749 3300005981 Bacteria 2708
23 Ga0070717_10137839 3300006028 Bacteria 2102
24 Ga0070717_10443473 3300006028 Bacteria 1169
25 Ga0070716_100025464 3300006173 Bacteria 3157
26 Ga0075428_100002957 3300006844 Bacteria 18532
27 Ga0075428_100004982 3300006844 Bacteria 14745
28 Ga0075428_100023108 3300006844 Bacteria 6880
29 Ga0075430_100001581 3300006846 Bacteria 18597
30 Ga0075430_100001930 3300006846 Bacteria 17022
31 Ga0075431_100001077 3300006847 Bacteria 24422
32 Ga0075431_100002157 3300006847 Bacteria 18823
33 Ga0075431_100007360 3300006847 Bacteria 10963
34 Ga0075431_100316062 3300006847 Bacteria 1575
35 Ga0075433_10372905 3300006852 Bacteria 1260
36 Ga0075429_100000339 3300006880 Bacteria 34022
37 Ga0075429_100011314 3300006880 Bacteria 7725
38 Ga0075429_100032045 3300006880 Bacteria 4569
39 Ga0105240_10435615 3300009093 Bacteria 1470
40 Ga0111539_10001958 3300009094 Bacteria 27479
41 Ga0111539_10003999 3300009094 Bacteria 19355
42 Ga0105245_10524207 3300009098 Bacteria 1204
43 Ga0105245_10853269 3300009098 Bacteria 951
44 Ga0114129_10062047 3300009147 Bacteria 5222
45 Ga0114129_10557388 3300009147 Bacteria 1489
46 Ga0105243_10024248 3300009148 Bacteria 4626
47 Ga0105242_10131916 3300009176 Bacteria 2158
48 Ga0105237_10400936 3300009545 Bacteria 1376
49 Ga0105249_10016130 3300009553 Bacteria 6623
50 Ga0157369_10009123 3300013105 Bacteria 11348
51 Ga0157378_10075893 3300013297 Bacteria 3027
52 Ga0163162_10898682 3300013306 Bacteria 999
53 Ga0157375_10261195 3300013308 Bacteria 1893
54 Ga0157375_10962385 3300013308 Bacteria 995
55 Ga0163163_10298586 3300014325 Bacteria 1663
56 Ga0163163_11098451 3300014325 Bacteria 858
57 Ga0157380_10104108 3300014326 Bacteria 2369
58 Ga0157380_10219052 3300014326 Bacteria 1701
59 Ga0157380_10546524 3300014326 Bacteria 1135
60 Ga0163161_10049850 3300017792 Bacteria 3028
61 Ga0163161_10216912 3300017792 Bacteria 1480
62 Ga0213874_10012432 3300021377 Bacteria 2183
63 Ga0213875_10000246 3300021388 Bacteria 54368
64 Ga0207699_10032284 3300025906 Bacteria 2949
65 Ga0207705_10019687 3300025909 Bacteria 4826
66 Ga0207705_10755993 3300025909 Bacteria 755
67 Ga0207695_10842951 3300025913 Bacteria 797
68 Ga0207693_10026349 3300025915 Bacteria 4601
69 Ga0207694_10112122 3300025924 Bacteria 2170
70 Ga0207687_10216530 3300025927 Bacteria 1505
71 Ga0207700_10019430 3300025928 Bacteria 4589
72 Ga0207664_10001557 3300025929 Bacteria 15047
73 Ga0207664_10158876 3300025929 Bacteria 1926
74 Ga0207664_10635077 3300025929 Bacteria 959
75 Ga0207686_10145644 3300025934 Bacteria 1643
76 Ga0207665_10005439 3300025939 Bacteria 8504
77 Ga0207661_10367780 3300025944 Bacteria 1300
78 Ga0207667_10071939 3300025949 Unclassified 3595
79 Ga0207712_10559489 3300025961 Bacteria 985
80 Ga0207639_10209423 3300026041 Bacteria 1677
81 Ga0207639_10461815 3300026041 Bacteria 1154
82 Ga0207708_10311308 3300026075 Bacteria 1283
83 Ga0207702_10219377 3300026078 Bacteria 1772
84 Ga0207674_10222423 3300026116 Bacteria 1836
85 Ga0207675_100162468 3300026118 Bacteria 2131
86 Ga0207683_10129259 3300026121 Bacteria 2271
87 Ga0207428_10006131 3300027907 Bacteria 11103
88 Ga0265336_10134597 3300028666 Bacteria 735
89 Ga0307511_10000465 3300030521 Bacteria 43914
90 Ga0316579_10080064 3300031691 Bacteria 1555
91 Ga0316576_10005103 3300031727 Bacteria 7967
92 Ga0316578_10026252 3300031728 Bacteria 3283
93 Ga0316577_10235673 3300031733 Bacteria 1035
94 Ga0307409_100256412 3300031995 Bacteria 1602
95 Ga0316574_0174978 3300035398 Bacteria 1382
96 Ga0316584_0088586 3300036712 Bacteria 2317
97 Ga0316584_0153175 3300036712 Bacteria 1715
98 Ga0436364_0330965 3300037853 Bacteria 247749
99 Ga0436364_1424638 3300037853 Bacteria 1868
100 Ga0436364_1437267 3300037853 Unclassified 858
101 Ga0395901_0157882 3300038443 Bacteria 2382
102 Ga0436363_0707443 3300039450 Bacteria 4692
103 Ga0451837_0642481 3300041494 Bacteria 841
104 Ga0451853_1537333 3300041512 Bacteria 709
105 Ga0466969_0004312 3300044656 Bacteria 7565
106 Ga0466969_0014391 3300044656 Bacteria 4159
107 Ga0466969_0020947 3300044656 Unclassified 3382
108 Ga0466966_0004818 3300044684 Bacteria 8872
109 Ga0466961_0011999 3300044693 Bacteria 5537
110 Ga0466961_0048070 3300044693 Bacteria 2727
111 Ga0466961_0049257 3300044693 Bacteria 2693
112 Ga0466961_0117922 3300044693 Bacteria 1668
113 Ga0466963_0253438 3300044694 Unclassified 1235
114 Ga0453684_0029252 3300044712 Bacteria 7834
115 Ga0466968_0104848 3300044735 Bacteria 1266
116 Ga0466970_0023481 3300044765 Bacteria 3221
117 Ga0466959_0159584 3300045049 Bacteria 1586
118 Ga0466967_0004073 3300045976 Bacteria 9758
119 Ga0495582_0193845 3300046473 Bacteria 1160
120 Ga0495630_0390059 3300046517 Bacteria 1067
121 Ga0495635_0334572 3300046663 Bacteria 1012
122 Ga0495658_0076539 3300046683 Bacteria 1956
123 Ga0495613_0167680 3300046689 Bacteria 1560
124 Ga0495613_0270605 3300046689 Bacteria 1182
125 Ga0495604_0213092 3300047317 Bacteria 1334
126 Ga0495676_0215553 3300047321 Bacteria 1326
127 Ga0495685_038827 3300047447 Bacteria 1630
128 Ga0496102_0546536 3300048905 Unclassified 1081
129 Ga0496103_0312422 3300048906 Unclassified 1011
130 Ga0496109_0053682 3300048912 Bacteria 3676
131 Ga0496115_0086971 3300048918 Bacteria 2550
132 Ga0496116_0000414 3300048919 Bacteria 60544
133 Ga0496117_0025262 3300048920 Bacteria 4675
134 Ga0496118_0001018 3300048921 Bacteria 43584
135 Ga0501031_0068157 3300049568 Bacteria 2318
136 Ga0501031_0127506 3300049568 Bacteria 1662
137 Ga0501032_0003550 3300049569 Bacteria 11896
138 Ga0501034_0000034 3300049571 Bacteria 242608
139 Ga0501034_0232537 3300049571 Bacteria 1792
140 Ga0501034_0793787 3300049571 Bacteria 840
141 Ga0501037_0003807 3300049573 Bacteria 10946
142 Ga0501037_0060730 3300049573 Bacteria 2757
143 Ga0501040_0314693 3300049576 Bacteria 1119
144 Ga0501041_0172915 3300049577 Bacteria 1352
145 Ga0501042_0426516 3300049578 Bacteria 961
146 Ga0501046_0176377 3300049580 Bacteria 1601
147 Ga0501047_0139228 3300049581 Bacteria 2306
148 Ga0501048_0244771 3300049582 Bacteria 1273
149 Ga0501048_0295197 3300049582 Bacteria 1153
150 Ga0501067_0412314 3300049583 Bacteria 754
151 Ga0501068_0000047 3300049584 Bacteria 46268
152 Ga0501070_0009832 3300049586 Bacteria 8086
153 Ga0501070_0014794 3300049586 Bacteria 6566
154 Ga0501070_0122217 3300049586 Bacteria 2152
155 Ga0501072_0208932 3300049588 Bacteria 1556
156 Ga0501072_0348082 3300049588 Bacteria 1176
157 Ga0501073_0012093 3300049589 Bacteria 6301
158 Ga0501073_0518110 3300049589 Bacteria 824
159 Ga0501074_0008523 3300049590 Bacteria 7428
160 Ga0501074_0440607 3300049590 Bacteria 924
161 Ga0501075_0248512 3300049591 Bacteria 1356
162 Ga0501076_0184076 3300049592 Bacteria 1703
163 Ga0501076_0298530 3300049592 Bacteria 1320
164 Ga0501076_0304425 3300049592 Bacteria 1307
165 Ga0501076_0333766 3300049592 Bacteria 1244
166 Ga0501077_0246947 3300049593 Bacteria 1135
167 Ga0501080_0058064 3300049742 Bacteria 3602
168 Ga0501080_1170795 3300049742 Bacteria 662
169 Ga0501081_0289581 3300049743 Bacteria 1200
170 Ga0501083_0005646 3300049744 Bacteria 8860
171 Ga0501044_0000853 3300049823 Bacteria 36654
172 Ga0501044_0423224 3300049823 Bacteria 1242
173 Ga0501045_0010603 3300049824 Bacteria 6455
174 Ga0501045_0086639 3300049824 Bacteria 2312
175 Ga0501045_1032923 3300049824 Bacteria 602
176 nmdc:mga0yw44_20138_c1 3300050492 Bacteria 3696
177 nmdc:mga05p37_13232_c1 3300050507 Bacteria 9878
178 nmdc:mga05p37_9494_c1 3300050507 Bacteria 11517
179 nmdc:mga09592_154_c1 3300050508 Bacteria 47375
180 nmdc:mga09592_297_c1 3300050508 Bacteria 36086
181 nmdc:mga0qj67_13137_c1 3300050509 Bacteria 6252
182 nmdc:mga0qj67_6880_c1 3300050509 Bacteria 8365
183 nmdc:mga06r32_130_c1 3300050510 Bacteria 55123
184 nmdc:mga06r32_4537_c1 3300050510 Bacteria 12446
185 nmdc:mga06r32_56355_c1 3300050510 Bacteria 3773
186 nmdc:mga06r32_81646_c1 3300050510 Bacteria 3148
187 nmdc:mga08y16_9092_c1 3300050511 Bacteria 10431
188 nmdc:mga0a205_372488_c1 3300050515 Bacteria 1294
189 Ga0495655_0112673 3300053083 Bacteria 819
190 Ga0495619_0306402 3300053085 Bacteria 1100
191 Ga0501084_0021598 3300054114 Bacteria 5367
192 Ga0501084_0180469 3300054114 Bacteria 1782
193 Ga0530510_0029805 3300061734 Bacteria 3918
194 Ga0530510_0038120 3300061734 Bacteria 3469
195 Ga0530510_0226088 3300061734 Bacteria 1392
196 Ga0530510_0610153 3300061734 Bacteria 830
197 2819739004 2818991472 Bacteria 10089953
198 2559426078 2558860280 Bacteria 11429938
199 2643853357 2643221567 Bacteria 4163945
200 2644137317 2643221624 Bacteria 4384879
201 2837269842 2837268691 Bacteria 7850704
202 2866614404 2866612099 Bacteria 7543886
203 2868091594 2868088558 Bacteria 7609351
204 JGI25407J50210_10009513
205 Ga0070658_10000949
206 Ga0068868_100309671
207 Ga0070714_100048402
208 Ga0070714_100529363
209 Ga0070713_100186594
210 Ga0070711_100033095
211 Ga0070678_100602317
212 Ga0070706_100000025
213 Ga0068855_100013190
214 Ga0068854_100564222
215 Ga0068856_100345172
216 Ga0070702_100002085
217 Ga0070702_100023009
218 Ga0068852_100052149
219 Ga0068851_10182646
220 Ga0081455_10000409
221 Ga0081455_10012792
222 Ga0081455_10487573
223 Ga0081538_10000088
224 Ga0081538_10004785
225 Ga0081538_10045749
226 Ga0070717_10137839
227 Ga0070717_10443473
228 Ga0070716_100025464
229 Ga0075428_100002957
230 Ga0075428_100004982
231 Ga0075428_100023108
232 Ga0075430_100001581
233 Ga0075430_100001930
234 Ga0075431_100001077
235 Ga0075431_100002157
236 Ga0075431_100007360
237 Ga0075431_100316062
238 Ga0075433_10372905
239 Ga0075429_100000339
240 Ga0075429_100011314
241 Ga0075429_100032045
242 Ga0105240_10435615
243 Ga0111539_10001958
244 Ga0111539_10003999
245 Ga0105245_10524207
246 Ga0105245_10853269
247 Ga0114129_10062047
248 Ga0114129_10557388
249 Ga0105243_10024248
250 Ga0105242_10131916
251 Ga0105237_10400936
252 Ga0105249_10016130
253 Ga0157369_10009123
254 Ga0157378_10075893
255 Ga0163162_10898682
256 Ga0157375_10261195
257 Ga0157375_10962385
258 Ga0163163_10298586
259 Ga0163163_11098451
260 Ga0157380_10104108
261 Ga0157380_10219052
262 Ga0157380_10546524
263 Ga0163161_10049850
264 Ga0163161_10216912
265 Ga0213874_10012432
266 Ga0213875_10000246
267 Ga0207699_10032284
268 Ga0207705_10019687
269 Ga0207705_10755993
270 Ga0207695_10842951
271 Ga0207693_10026349
272 Ga0207694_10112122
273 Ga0207687_10216530
274 Ga0207700_10019430
275 Ga0207664_10001557
276 Ga0207664_10158876
277 Ga0207664_10635077
278 Ga0207686_10145644
279 Ga0207665_10005439
280 Ga0207661_10367780
281 Ga0207667_10071939
282 Ga0207712_10559489
283 Ga0207639_10209423
284 Ga0207639_10461815
285 Ga0207708_10311308
286 Ga0207702_10219377
287 Ga0207674_10222423
288 Ga0207675_100162468
289 Ga0207683_10129259
290 Ga0207428_10006131
291 Ga0265336_10134597
292 Ga0307511_10000465
293 Ga0316579_10080064
294 Ga0316576_10005103
295 Ga0316578_10026252
296 Ga0316577_10235673
297 Ga0307409_100256412
298 Ga0316574_0174978
299 Ga0316584_0088586
300 Ga0316584_0153175
301 Ga0436364_0330965
302 Ga0436364_1424638
303 Ga0436364_1437267
304 Ga0395901_0157882
305 Ga0436363_0707443
306 Ga0451837_0642481
307 Ga0451853_1537333
308 Ga0466969_0004312
309 Ga0466969_0014391
310 Ga0466969_0020947
311 Ga0466966_0004818
312 Ga0466961_0011999
313 Ga0466961_0048070
314 Ga0466961_0049257
315 Ga0466961_0117922
316 Ga0466963_0253438
317 Ga0453684_0029252
318 Ga0466968_0104848
319 Ga0466970_0023481
320 Ga0466959_0159584
321 Ga0466967_0004073
322 Ga0495582_0193845
323 Ga0495630_0390059
324 Ga0495635_0334572
325 Ga0495658_0076539
326 Ga0495613_0167680
327 Ga0495613_0270605
328 Ga0495604_0213092
329 Ga0495676_0215553
330 Ga0495685_038827
331 Ga0496102_0546536
332 Ga0496103_0312422
333 Ga0496109_0053682
334 Ga0496115_0086971
335 Ga0496116_0000414
336 Ga0496117_0025262
337 Ga0496118_0001018
338 Ga0501031_0068157
339 Ga0501031_0127506
340 Ga0501032_0003550
341 Ga0501034_0000034
342 Ga0501034_0232537
343 Ga0501034_0793787
344 Ga0501037_0003807
345 Ga0501037_0060730
346 Ga0501040_0314693
347 Ga0501041_0172915
348 Ga0501042_0426516
349 Ga0501046_0176377
350 Ga0501047_0139228
351 Ga0501048_0244771
352 Ga0501048_0295197
353 Ga0501067_0412314
354 Ga0501068_0000047
355 Ga0501070_0009832
356 Ga0501070_0014794
357 Ga0501070_0122217
358 Ga0501072_0208932
359 Ga0501072_0348082
360 Ga0501073_0012093
361 Ga0501073_0518110
362 Ga0501074_0008523
363 Ga0501074_0440607
364 Ga0501075_0248512
365 Ga0501076_0184076
366 Ga0501076_0298530
367 Ga0501076_0304425
368 Ga0501076_0333766
369 Ga0501077_0246947
370 Ga0501080_0058064
371 Ga0501080_1170795
372 Ga0501081_0289581
373 Ga0501083_0005646
374 Ga0501044_0000853
375 Ga0501044_0423224
376 Ga0501045_0010603
377 Ga0501045_0086639
378 Ga0501045_1032923
379 nmdc:mga0yw44_20138_c1
380 nmdc:mga05p37_13232_c1
381 nmdc:mga05p37_9494_c1
382 nmdc:mga09592_154_c1
383 nmdc:mga09592_297_c1
384 nmdc:mga0qj67_13137_c1
385 nmdc:mga0qj67_6880_c1
386 nmdc:mga06r32_130_c1
387 nmdc:mga06r32_4537_c1
388 nmdc:mga06r32_56355_c1
389 nmdc:mga06r32_81646_c1
390 nmdc:mga08y16_9092_c1
391 nmdc:mga0a205_372488_c1
392 Ga0495655_0112673
393 Ga0495619_0306402
394 Ga0501084_0021598
395 Ga0501084_0180469
396 Ga0530510_0029805
397 Ga0530510_0038120
398 Ga0530510_0226088
399 Ga0530510_0610153
400 2819739004
401 2559426078
402 2643853357
403 2644137317
404 2837269842
405 2866614404
406 2868091594

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05175

MTS

Methyltransferase small domain

46

213

0.92

PF08241

Methyltransf_11

Methyltransferase domain

82

177

0.86

PF13649

Methyltransf_25

Methyltransferase domain

82

174

0.82

PF13847

Methyltransf_31

Methyltransferase domain

77

206

0.78

PF13489

Methyltransf_23

Methyltransferase domain

59

210

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
1dus-assembly1.cif.gz_A mj0882-a hypothetical protein from m. jannaschii 0.8746 6 198
4dcm-assembly1.cif.gz_A crystal structure of methyltransferase rlmg modifying g1835 of 23s rrna in escherichia coli 0.8682 18 199
1dus-assembly1.cif.gz_A mj0882-a hypothetical protein from m. jannaschii 0.8661 6 198
8tjk-assembly1.cif.gz_B sam-dependent methyltransferase redm bound to sah 0.8393 59 198
8tjj-assembly2.cif.gz_B sam-dependent methyltransferase redm bound to sam 0.839 59 198
ID Description Score Start End Superfamily
af_Q2G0N7_5_202_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9129 6 198 3.40.50.150
af_Q2G0N7_5_202_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8873 6 198 3.40.50.150
af_Q4E3J0_145_404_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8796 60 113 3.40.50.150
1dusA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8678 6 198 3.40.50.150
af_P0A8T1_101_293_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8677 36 199 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A535YUS4-F1-model_v4 Methyltransferase 0.9992 123 197 GO:0008168
GO:0032259
AF-A0A7W0FSU6-F1-model_v4 Methyltransferase 0.9948 62 196 GO:0008757
GO:0032259
AF-A0A7V9LMY0-F1-model_v4 Methyltransferase 0.9933 19 198 GO:0008757
GO:0032259
AF-A0A7K0Y095-F1-model_v4 Methyltransferase 0.9933 70 197 GO:0008757
GO:0032259
AF-A0A6B0ZDV7-F1-model_v4 Methyltransferase 0.9909 56 199 GO:0008757
GO:0032259

Map