F311729

General Info

Members Datasets Scaffolds Average Seq Length
203 129 406 180

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0148693|Ga0501031_0148693_709_1305
Length 198
Sequence MSETSERSEAIMGARQSDRLAEARAALGRLVVDVPDFPEPGVVFKDISPLLADHDGFTAVIEALADVGRDETGAVVVDKVVGMEARGFILAAPVALALGCGFVPVRKAGKLPRETFAVSYALEYGEATLELHRDAIQAGERVLVVDDVLATGGTVAATAQLIEQSGATAHAVSVLLELGFLDGRSKTGDLPVVSVLTI

Samples

Sample ID Description Type Environment
1 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
10 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
11 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
16 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
17 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
23 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
24 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
25 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
26 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
33 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
34 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
35 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
36 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
37 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
38 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
39 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
40 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
41 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
42 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
43 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
44 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
45 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
46 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
47 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
48 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
49 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
50 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
51 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
52 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
53 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
54 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
55 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
56 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
57 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
58 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
59 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
60 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
61 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
62 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
63 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
64 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
65 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
68 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
69 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
70 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
71 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
72 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
73 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
74 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
75 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
76 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
77 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
78 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
90 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
91 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
92 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
93 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
94 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
95 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
96 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
97 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
98 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
99 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
100 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
101 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
102 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
105 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
106 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
107 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
108 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
109 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
110 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
111 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
112 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
113 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
114 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
115 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
116 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
117 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
118 2643221615 Nocardioides sp. Root224 Isolate Unclassified
119 2643221617 Nocardioides sp. Root79 Isolate Unclassified
120 2643221620 Nocardioides sp. Root240 Isolate Unclassified
121 2643221641 Nocardioides sp. Root122 Isolate Unclassified
122 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
123 2739367898 Nocardioides sp. CF479 Isolate Unclassified
124 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
125 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
126 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
127 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
128 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
129 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 92.61
Metatranscriptomes 1.48
Isolates 5.91

Biome Distribution

Category Percentage (%)
Aerial Root 0.49
Bulb 0
Endosphere 13.79
Nodule 0
Rhizoplane 3.94
Rhizosphere 72.91
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501031_0148693 3300049568 Bacteria 1530
2 LJQas_1000412 3300000549 Bacteria 7231
3 Ga0070682_100290119 3300005337 Bacteria 1196
4 Ga0070661_100373196 3300005344 Bacteria 1123
5 Ga0070674_100932291 3300005356 Bacteria 758
6 Ga0070659_100148035 3300005366 Bacteria 1914
7 Ga0070700_100130933 3300005441 Bacteria 1693
8 Ga0070678_100676152 3300005456 Bacteria 928
9 Ga0070662_100304701 3300005457 Bacteria 1295
10 Ga0070664_100023599 3300005564 Bacteria 5081
11 Ga0070664_100710195 3300005564 Bacteria 937
12 Ga0081539_10120870 3300005985 Bacteria 1301
13 Ga0075365_10004436 3300006038 Bacteria 7434
14 Ga0075365_10056988 3300006038 Bacteria 2599
15 Ga0075365_10070755 3300006038 Bacteria 2347
16 Ga0075365_10350719 3300006038 Bacteria 1040
17 Ga0075368_10076685 3300006042 Bacteria 1356
18 Ga0075363_100028409 3300006048 Bacteria 2877
19 Ga0075364_10085314 3300006051 Bacteria 2091
20 Ga0075364_10140168 3300006051 Bacteria 1626
21 Ga0075364_10202534 3300006051 Bacteria 1345
22 Ga0075362_10022703 3300006177 Bacteria 2646
23 Ga0075362_10038500 3300006177 Bacteria 2100
24 Ga0075370_10023528 3300006353 Bacteria 3393
25 Ga0075428_100055733 3300006844 Bacteria 4331
26 Ga0075430_100322730 3300006846 Bacteria 1276
27 Ga0075429_100078570 3300006880 Bacteria 2876
28 Ga0114129_11172053 3300009147 Bacteria 958
29 Ga0105243_10640961 3300009148 Bacteria 1028
30 Ga0105249_11748830 3300009553 Bacteria 694
31 Ga0105239_10180982 3300010375 Bacteria 2359
32 Ga0157372_10608142 3300013307 Bacteria 1274
33 Ga0157372_10963041 3300013307 Bacteria 989
34 Ga0207690_10121108 3300025932 Bacteria 1901
35 Ga0207706_10283665 3300025933 Bacteria 1444
36 Ga0207709_10371521 3300025935 Bacteria 1085
37 Ga0207669_10205898 3300025937 Bacteria 1432
38 Ga0207679_10021707 3300025945 Bacteria 4358
39 Ga0207683_10364442 3300026121 Bacteria 1327
40 Ga0209813_10004950 3300027866 Bacteria 3214
41 Ga0307408_100853600 3300031548 Bacteria 830
42 Ga0307405_10246393 3300031731 Bacteria 1327
43 Ga0307405_10887693 3300031731 Bacteria 753
44 Ga0307413_10311410 3300031824 Bacteria 1198
45 Ga0307413_10389329 3300031824 Bacteria 1089
46 Ga0307410_10245618 3300031852 Bacteria 1389
47 Ga0307410_10353219 3300031852 Bacteria 1175
48 Ga0307410_10475880 3300031852 Bacteria 1024
49 Ga0307406_10174473 3300031901 Bacteria 1559
50 Ga0307406_10589266 3300031901 Bacteria 915
51 Ga0307407_10066961 3300031903 Bacteria 2120
52 Ga0307412_10911703 3300031911 Bacteria 771
53 Ga0307409_100009201 3300031995 Bacteria 6055
54 Ga0307409_100036111 3300031995 Bacteria 3628
55 Ga0307409_100235847 3300031995 Bacteria 1662
56 Ga0307409_100732451 3300031995 Bacteria 991
57 Ga0307409_100790059 3300031995 Bacteria 956
58 Ga0307416_100020285 3300032002 Bacteria 4739
59 Ga0307416_100244280 3300032002 Bacteria 1742
60 Ga0307416_100954271 3300032002 Bacteria 959
61 Ga0307414_10071340 3300032004 Bacteria 2505
62 Ga0307414_10163723 3300032004 Bacteria 1770
63 Ga0307415_100015040 3300032126 Bacteria 4570
64 Ga0307415_100019311 3300032126 Bacteria 4136
65 Ga0307415_100366449 3300032126 Bacteria 1218
66 Ga0307415_100853999 3300032126 Bacteria 835
67 Ga0395901_0046333 3300038443 Bacteria 4516
68 Ga0395901_0063827 3300038443 Bacteria 3834
69 Ga0439461_0005990 3300041410 Bacteria 2102
70 Ga0451791_0815548 3300041451 Bacteria 728
71 Ga0451793_0631242 3300041452 Bacteria 7239
72 Ga0451798_0523598 3300041458 Bacteria 646
73 Ga0451802_1035661 3300041460 Bacteria 686
74 Ga0451833_0323278 3300041491 Bacteria 4841
75 Ga0451841_0268667 3300041498 Bacteria 746
76 Ga0451843_0878757 3300041509 Bacteria 754
77 Ga0451853_0792464 3300041512 Bacteria 908
78 Ga0451853_3189665 3300041512 Bacteria 622
79 Ga0439431_0003702 3300041997 Bacteria 3379
80 Ga0439431_0082156 3300041997 Bacteria 870
81 Ga0439445_0005648 3300042004 Bacteria 2858
82 Ga0439434_0090458 3300042435 Bacteria 978
83 Ga0466972_0036807 3300044658 Bacteria 2393
84 Ga0466972_0091516 3300044658 Bacteria 1442
85 Ga0466972_0388275 3300044658 Bacteria 654
86 Ga0466965_0047392 3300044683 Bacteria 2128
87 Ga0466965_0190272 3300044683 Bacteria 1085
88 Ga0466965_0214931 3300044683 Bacteria 1023
89 Ga0466961_0047077 3300044693 Bacteria 2758
90 Ga0466961_0074296 3300044693 Bacteria 2155
91 Ga0466963_0025540 3300044694 Bacteria 3769
92 Ga0466970_0006267 3300044765 Bacteria 5938
93 Ga0466970_0026269 3300044765 Bacteria 3052
94 Ga0466970_0045961 3300044765 Bacteria 2325
95 Ga0466957_0004120 3300044842 Bacteria 8053
96 Ga0466960_0023144 3300044901 Bacteria 2787
97 Ga0466960_0119258 3300044901 Bacteria 1380
98 Ga0466960_0276506 3300044901 Bacteria 940
99 Ga0466959_0250098 3300045049 Bacteria 1223
100 Ga0466958_0100411 3300045836 Bacteria 1799
101 Ga0466958_0702261 3300045836 Bacteria 659
102 Ga0466967_0063187 3300045976 Bacteria 3289
103 Ga0466967_0636659 3300045976 Bacteria 1054
104 Ga0495627_058678 3300046453 Bacteria 1143
105 Ga0495676_0233426 3300047321 Bacteria 1263
106 Ga0495686_0087592 3300047472 Bacteria 1894
107 Ga0496106_0462732 3300048909 Bacteria 1019
108 Ga0496108_0087567 3300048911 Bacteria 2645
109 Ga0496109_0261563 3300048912 Bacteria 1630
110 Ga0496110_0341896 3300048913 Bacteria 1363
111 Ga0496124_0465536 3300048927 Bacteria 858
112 Ga0496126_0001168 3300048929 Bacteria 43240
113 Ga0501317_008825 3300049533 Bacteria 1170
114 Ga0501317_077282 3300049533 Bacteria 571
115 Ga0501318_000047 3300049534 Bacteria 4815
116 Ga0501031_0020468 3300049568 Bacteria 4313
117 Ga0501031_0082955 3300049568 Bacteria 2089
118 Ga0501031_0172361 3300049568 Bacteria 1414
119 Ga0501032_0238625 3300049569 Bacteria 1181
120 Ga0501033_0244279 3300049570 Bacteria 1273
121 Ga0501034_0248166 3300049571 Bacteria 1725
122 Ga0501036_0015691 3300049572 Bacteria 6326
123 Ga0501036_0329770 3300049572 Bacteria 1275
124 Ga0501037_0067456 3300049573 Bacteria 2605
125 Ga0501038_0025626 3300049574 Bacteria 5255
126 Ga0501038_0202880 3300049574 Bacteria 1590
127 Ga0501039_0005445 3300049575 Bacteria 9625
128 Ga0501039_0184934 3300049575 Bacteria 1638
129 Ga0501039_0269878 3300049575 Bacteria 1337
130 Ga0501040_0006367 3300049576 Bacteria 7666
131 Ga0501040_0083019 3300049576 Bacteria 2222
132 Ga0501040_0138351 3300049576 Bacteria 1714
133 Ga0501040_0542355 3300049576 Bacteria 839
134 Ga0501042_0004821 3300049578 Bacteria 8620
135 Ga0501042_0048428 3300049578 Bacteria 3030
136 Ga0501042_0300762 3300049578 Bacteria 1159
137 Ga0501046_0436810 3300049580 Bacteria 942
138 Ga0501048_0025601 3300049582 Bacteria 4300
139 Ga0501048_0031942 3300049582 Bacteria 3806
140 Ga0501069_0156452 3300049585 Bacteria 1311
141 Ga0501070_0102802 3300049586 Bacteria 2363
142 Ga0501070_0247308 3300049586 Bacteria 1459
143 Ga0501070_0260516 3300049586 Bacteria 1417
144 Ga0501071_0024589 3300049587 Bacteria 4213
145 Ga0501071_0071673 3300049587 Bacteria 2526
146 Ga0501072_0005676 3300049588 Bacteria 9503
147 Ga0501072_0060878 3300049588 Bacteria 2976
148 Ga0501073_0235435 3300049589 Bacteria 1265
149 Ga0501074_0030826 3300049590 Bacteria 3885
150 Ga0501074_0147875 3300049590 Bacteria 1680
151 Ga0501075_0009620 3300049591 Bacteria 6767
152 Ga0501075_0239757 3300049591 Bacteria 1382
153 Ga0501075_0346742 3300049591 Bacteria 1132
154 Ga0501076_0004452 3300049592 Bacteria 9969
155 Ga0501076_0006688 3300049592 Bacteria 8366
156 Ga0501076_0169286 3300049592 Bacteria 1781
157 Ga0501076_0552285 3300049592 Bacteria 950
158 Ga0501077_0025548 3300049593 Bacteria 3751
159 Ga0501077_0029045 3300049593 Bacteria 3515
160 Ga0501209_048734 3300049656 Bacteria 1149
161 Ga0501079_0109487 3300049741 Bacteria 2145
162 Ga0501080_0126524 3300049742 Bacteria 2367
163 Ga0501081_0037010 3300049743 Bacteria 3329
164 Ga0501081_0457486 3300049743 Bacteria 949
165 Ga0501035_0084074 3300049822 Bacteria 2807
166 Ga0501035_0267511 3300049822 Bacteria 1448
167 Ga0501044_0076063 3300049823 Bacteria 3409
168 Ga0501044_0328753 3300049823 Bacteria 1452
169 Ga0501045_0009921 3300049824 Bacteria 6663
170 nmdc:mga03683_45587_c1 3300050489 Bacteria 1815
171 nmdc:mga00v17_123380_c1 3300050491 Bacteria 1651
172 nmdc:mga00v17_12367_c1 3300050491 Bacteria 4708
173 nmdc:mga00v17_1529_c2 3300050491 Bacteria 10795
174 nmdc:mga00v17_80682_c1 3300050491 Bacteria 2030
175 nmdc:mga0yw44_107145_c1 3300050492 Bacteria 1787
176 nmdc:mga0yw44_200376_c1 3300050492 Bacteria 1318
177 nmdc:mga0yw44_266057_c1 3300050492 Bacteria 1144
178 nmdc:mga0yw44_369089_c1 3300050492 Bacteria 968
179 nmdc:mga0yw44_41715_c1 3300050492 Bacteria 2733
180 nmdc:mga06z11_526041_c1 3300050494 Bacteria 717
181 nmdc:mga04h51_56708_c1 3300050495 Bacteria 1331
182 nmdc:mga07m45_23788_c1 3300050496 Bacteria 3351
183 nmdc:mga09592_292239_c1 3300050508 Bacteria 1413
184 nmdc:mga06r32_251741_c1 3300050510 Bacteria 1754
185 Ga0500644_0000129 3300053088 Bacteria 46233
186 Ga0500556_0000724 3300053104 Bacteria 19897
187 Ga0501084_0009712 3300054114 Bacteria 7957
188 Ga0501082_0032618 3300060353 Bacteria 4493
189 Ga0501082_0152515 3300060353 Bacteria 2007
190 Ga0530510_0036611 3300061734 Bacteria 3536
191 Ga0530510_0204265 3300061734 Bacteria 1468
192 2644093895 2643221615 Bacteria 5487866
193 2644102301 2643221617 Bacteria 5139111
194 2644115525 2643221620 Bacteria 5134593
195 2644229284 2643221641 Bacteria 4490190
196 2644323739 2643221657 Bacteria 5490246
197 2740169509 2739367898 Bacteria 4367674
198 2774392274 2773857762 Bacteria 5971770
199 2809196082 2808606439 Bacteria 5952208
200 2812351791 2811994878 Bacteria 5992952
201 2868088604 2868088558 Bacteria 7609351
202 2891970580 2891968417 Bacteria 5821697
203 2990259158 2990256926 Bacteria 4252839
204 Ga0501031_0148693
205 LJQas_1000412
206 Ga0070682_100290119
207 Ga0070661_100373196
208 Ga0070674_100932291
209 Ga0070659_100148035
210 Ga0070700_100130933
211 Ga0070678_100676152
212 Ga0070662_100304701
213 Ga0070664_100023599
214 Ga0070664_100710195
215 Ga0081539_10120870
216 Ga0075365_10004436
217 Ga0075365_10056988
218 Ga0075365_10070755
219 Ga0075365_10350719
220 Ga0075368_10076685
221 Ga0075363_100028409
222 Ga0075364_10085314
223 Ga0075364_10140168
224 Ga0075364_10202534
225 Ga0075362_10022703
226 Ga0075362_10038500
227 Ga0075370_10023528
228 Ga0075428_100055733
229 Ga0075430_100322730
230 Ga0075429_100078570
231 Ga0114129_11172053
232 Ga0105243_10640961
233 Ga0105249_11748830
234 Ga0105239_10180982
235 Ga0157372_10608142
236 Ga0157372_10963041
237 Ga0207690_10121108
238 Ga0207706_10283665
239 Ga0207709_10371521
240 Ga0207669_10205898
241 Ga0207679_10021707
242 Ga0207683_10364442
243 Ga0209813_10004950
244 Ga0307408_100853600
245 Ga0307405_10246393
246 Ga0307405_10887693
247 Ga0307413_10311410
248 Ga0307413_10389329
249 Ga0307410_10245618
250 Ga0307410_10353219
251 Ga0307410_10475880
252 Ga0307406_10174473
253 Ga0307406_10589266
254 Ga0307407_10066961
255 Ga0307412_10911703
256 Ga0307409_100009201
257 Ga0307409_100036111
258 Ga0307409_100235847
259 Ga0307409_100732451
260 Ga0307409_100790059
261 Ga0307416_100020285
262 Ga0307416_100244280
263 Ga0307416_100954271
264 Ga0307414_10071340
265 Ga0307414_10163723
266 Ga0307415_100015040
267 Ga0307415_100019311
268 Ga0307415_100366449
269 Ga0307415_100853999
270 Ga0395901_0046333
271 Ga0395901_0063827
272 Ga0439461_0005990
273 Ga0451791_0815548
274 Ga0451793_0631242
275 Ga0451798_0523598
276 Ga0451802_1035661
277 Ga0451833_0323278
278 Ga0451841_0268667
279 Ga0451843_0878757
280 Ga0451853_0792464
281 Ga0451853_3189665
282 Ga0439431_0003702
283 Ga0439431_0082156
284 Ga0439445_0005648
285 Ga0439434_0090458
286 Ga0466972_0036807
287 Ga0466972_0091516
288 Ga0466972_0388275
289 Ga0466965_0047392
290 Ga0466965_0190272
291 Ga0466965_0214931
292 Ga0466961_0047077
293 Ga0466961_0074296
294 Ga0466963_0025540
295 Ga0466970_0006267
296 Ga0466970_0026269
297 Ga0466970_0045961
298 Ga0466957_0004120
299 Ga0466960_0023144
300 Ga0466960_0119258
301 Ga0466960_0276506
302 Ga0466959_0250098
303 Ga0466958_0100411
304 Ga0466958_0702261
305 Ga0466967_0063187
306 Ga0466967_0636659
307 Ga0495627_058678
308 Ga0495676_0233426
309 Ga0495686_0087592
310 Ga0496106_0462732
311 Ga0496108_0087567
312 Ga0496109_0261563
313 Ga0496110_0341896
314 Ga0496124_0465536
315 Ga0496126_0001168
316 Ga0501317_008825
317 Ga0501317_077282
318 Ga0501318_000047
319 Ga0501031_0020468
320 Ga0501031_0082955
321 Ga0501031_0172361
322 Ga0501032_0238625
323 Ga0501033_0244279
324 Ga0501034_0248166
325 Ga0501036_0015691
326 Ga0501036_0329770
327 Ga0501037_0067456
328 Ga0501038_0025626
329 Ga0501038_0202880
330 Ga0501039_0005445
331 Ga0501039_0184934
332 Ga0501039_0269878
333 Ga0501040_0006367
334 Ga0501040_0083019
335 Ga0501040_0138351
336 Ga0501040_0542355
337 Ga0501042_0004821
338 Ga0501042_0048428
339 Ga0501042_0300762
340 Ga0501046_0436810
341 Ga0501048_0025601
342 Ga0501048_0031942
343 Ga0501069_0156452
344 Ga0501070_0102802
345 Ga0501070_0247308
346 Ga0501070_0260516
347 Ga0501071_0024589
348 Ga0501071_0071673
349 Ga0501072_0005676
350 Ga0501072_0060878
351 Ga0501073_0235435
352 Ga0501074_0030826
353 Ga0501074_0147875
354 Ga0501075_0009620
355 Ga0501075_0239757
356 Ga0501075_0346742
357 Ga0501076_0004452
358 Ga0501076_0006688
359 Ga0501076_0169286
360 Ga0501076_0552285
361 Ga0501077_0025548
362 Ga0501077_0029045
363 Ga0501209_048734
364 Ga0501079_0109487
365 Ga0501080_0126524
366 Ga0501081_0037010
367 Ga0501081_0457486
368 Ga0501035_0084074
369 Ga0501035_0267511
370 Ga0501044_0076063
371 Ga0501044_0328753
372 Ga0501045_0009921
373 nmdc:mga03683_45587_c1
374 nmdc:mga00v17_123380_c1
375 nmdc:mga00v17_12367_c1
376 nmdc:mga00v17_1529_c2
377 nmdc:mga00v17_80682_c1
378 nmdc:mga0yw44_107145_c1
379 nmdc:mga0yw44_200376_c1
380 nmdc:mga0yw44_266057_c1
381 nmdc:mga0yw44_369089_c1
382 nmdc:mga0yw44_41715_c1
383 nmdc:mga06z11_526041_c1
384 nmdc:mga04h51_56708_c1
385 nmdc:mga07m45_23788_c1
386 nmdc:mga09592_292239_c1
387 nmdc:mga06r32_251741_c1
388 Ga0500644_0000129
389 Ga0500556_0000724
390 Ga0501084_0009712
391 Ga0501082_0032618
392 Ga0501082_0152515
393 Ga0530510_0036611
394 Ga0530510_0204265
395 2644093895
396 2644102301
397 2644115525
398 2644229284
399 2644323739
400 2740169509
401 2774392274
402 2809196082
403 2812351791
404 2868088604
405 2891970580
406 2990259158

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00156

Pribosyltran

Phosphoribosyl transferase domain

47

195

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4m0k-assembly2.cif.gz_D crystal structure of adenine phosphoribosyltransferase from rhodothermus marinus dsm 4252, nysgrc target 029775. 0.841 1 144
1l1q-assembly1.cif.gz_A crystal structure of aprtase from giardia lamblia complexed with 9-deazaadenine 0.8286 4 142
4lza-assembly1.cif.gz_B crystal structure of adenine phosphoribosyltransferase from thermoanaerobacter pseudethanolicus atcc 33223, nysgrc target 029700. 0.8189 5 145
5vjn-assembly1.cif.gz_A crystal structure of adenine phosphoribosyltransferase from saccharomyces cerevisiae complexed with d-2,5-dideoxy-2,5-imino-altritol 1,6-bisphosphate (d-diab) and adenine 0.8113 1 144
5y4a-assembly1.cif.gz_B cadmium directed assembly of adenine phosphoribosyltransferase from yersinia pseudotuberculosis. 0.8092 2 143
ID Description Score Start End Superfamily
af_P91455_5_184_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8448 2 143 3.40.50.2020
4m0kC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8427 1 144 3.40.50.2020
af_A0A0P0WCD3_31_176_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8377 4 143 3.40.50.2020
af_P9WQ07_33_212_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8364 4 144 3.40.50.2020
af_A0A1D6HD26_34_217_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8261 4 144 3.40.50.2020
ID Description Score Start End GO Terms
AF-A0A3D1L865-F1-model_v4 deleted 0.9542 6 126
AF-A0A6M1Q3K9-F1-model_v4 deleted 0.9447 4 117
AF-A0A3D1L865-F1-model_v4 deleted 0.931 6 126
AF-X1NDJ2-F1-model_v4 Adenine phosphoribosyltransferase 0.9285 6 123 GO:0003999
GO:0005737
GO:0006166
AF-A0A6M1Q3K9-F1-model_v4 deleted 0.9285 4 117

Map