F311718

General Info

Members Datasets Scaffolds Average Seq Length
203 137 406 360

Family's Representative Sequence

Representative Sequence 3300048929|Ga0496126_0081817|Ga0496126_0081817_1628_2752
Length 359
Sequence MFSFSNIFWLGTKELRALAKDLMMILFIIWSFGFSIYTQSTGAGETVNNAAIGIVDEDQSQLSRSIAGLFYPPYFQTVKTISAADIDRAMDEGLYTFIVVIPPGFEKDTRKGRDTEIQLNVDATASQQAALGTGYIQSMVTNEVARYRKDFEETRGLSSDLAIRRAFNPGGTQSWFKSIVSLADQLSMLVIILTGAALLREREHGTIEHLLVMPLTAFEIALAKVWANGLVIIVAFACSLLLVVEGALDVPIAGSRGLLMLGTTIYVFAAAAIGIFLGTLARTMAQFALMSPVANQPQWLQYVTWFLPSRHYVSFMQAIVSRGADFTIVWKEFATVLMMGVTFLVASLLLFRRSIATSQ

Samples

Sample ID Description Type Environment
1 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
31 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
52 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
54 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
55 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
56 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
57 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
58 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
59 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
60 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
61 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
62 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
63 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
66 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
67 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
68 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
69 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
70 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
71 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
72 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
73 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
74 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
75 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
76 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
77 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
78 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
79 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
80 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
81 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
82 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
83 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
84 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
85 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
86 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
87 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
88 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
89 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
105 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
106 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
107 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
108 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
109 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
110 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
111 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
112 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
113 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
114 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
115 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
116 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
118 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
119 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
120 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
121 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
122 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
123 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
124 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
125 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
126 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
127 2619619299 Pseudomonas veronii R4 Genome sequencing Isolate Unclassified
128 2738541265 Pseudomonas sp. GV077 Isolate Unclassified
129 2738541282 Pseudomonas sp. GV058 Isolate Unclassified
130 2738541303 Pseudomonas sp. GV105 Isolate Unclassified
131 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
132 2816332298 Pseudomonas veronii R02 Isolate Rhizosphere
133 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
134 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
135 2909399089 Nguyenibacter vanlangensis LMG 31431 Isolate Unclassified
136 8002060224 Methylocystis sp. Sn-Cys Isolate Unclassified
137 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.58
Metatranscriptomes 0
Isolates 5.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0.49
Rhizoplane 3.94
Rhizosphere 88.18
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496126_0081817 3300048929 Bacteria 2854
2 Ga0065707_10111336 3300005295 Bacteria 2398
3 Ga0065707_10151145 3300005295 Bacteria 1657
4 Ga0070658_10319034 3300005327 Bacteria 1327
5 Ga0068868_100021702 3300005338 Bacteria 4838
6 Ga0068868_100169765 3300005338 Bacteria 1805
7 Ga0070689_100003544 3300005340 Bacteria 10386
8 Ga0070689_100034147 3300005340 Bacteria 3880
9 Ga0070689_100090086 3300005340 Bacteria 2416
10 Ga0070687_100044289 3300005343 Bacteria 2266
11 Ga0070669_100115269 3300005353 Bacteria 2044
12 Ga0070671_100037735 3300005355 Bacteria 4008
13 Ga0070671_100332156 3300005355 Bacteria 1296
14 Ga0070673_100332642 3300005364 Bacteria 1344
15 Ga0070688_100001283 3300005365 Bacteria 12520
16 Ga0070688_100004715 3300005365 Bacteria 7121
17 Ga0070667_100003492 3300005367 Bacteria 13398
18 Ga0070667_100201192 3300005367 Bacteria 1768
19 Ga0070701_10104835 3300005438 Bacteria 1571
20 Ga0070694_100088654 3300005444 Bacteria 2166
21 Ga0070662_100048572 3300005457 Bacteria 3057
22 Ga0070686_100049774 3300005544 Bacteria 2660
23 Ga0070695_100000251 3300005545 Bacteria 26904
24 Ga0070704_100030564 3300005549 Bacteria 3610
25 Ga0068870_10103134 3300005840 Bacteria 1616
26 Ga0068863_100120348 3300005841 Bacteria 2503
27 Ga0068858_100009193 3300005842 Bacteria 9443
28 Ga0068860_100050101 3300005843 Bacteria 3976
29 Ga0068860_100174624 3300005843 Bacteria 2077
30 Ga0097621_100037310 3300006237 Bacteria 3893
31 Ga0097621_100051779 3300006237 Bacteria 3342
32 Ga0097621_100058584 3300006237 Bacteria 3151
33 Ga0068871_100004275 3300006358 Bacteria 9907
34 Ga0068871_100009762 3300006358 Bacteria 6965
35 Ga0068871_100040661 3300006358 Bacteria 3725
36 Ga0075428_100000003 3300006844 Bacteria 365483
37 Ga0075436_100249785 3300006914 Bacteria 1263
38 Ga0075435_100040151 3300007076 Bacteria 3736
39 Ga0111539_10000001 3300009094 Bacteria 1035431
40 Ga0111539_10003176 3300009094 Bacteria 21748
41 Ga0111539_10006951 3300009094 Bacteria 14525
42 Ga0111539_10017126 3300009094 Bacteria 8971
43 Ga0111539_10023496 3300009094 Bacteria 7575
44 Ga0105242_10040559 3300009176 Bacteria 3752
45 Ga0105248_10014689 3300009177 Bacteria 8618
46 Ga0105248_10084448 3300009177 Bacteria 3572
47 Ga0105248_10132273 3300009177 Bacteria 2815
48 Ga0105248_10187170 3300009177 Bacteria 2333
49 Ga0157374_10024408 3300013296 Bacteria 5421
50 Ga0157374_10064109 3300013296 Bacteria 3447
51 Ga0157378_10078199 3300013297 Bacteria 2983
52 Ga0157378_10116210 3300013297 Bacteria 2460
53 Ga0157378_10120491 3300013297 Bacteria 2418
54 Ga0163162_10012062 3300013306 Bacteria 8430
55 Ga0163162_10016088 3300013306 Bacteria 7312
56 Ga0163162_10327657 3300013306 Bacteria 1664
57 Ga0157375_10008549 3300013308 Bacteria 8964
58 Ga0157375_10043169 3300013308 Bacteria 4370
59 Ga0157375_10554997 3300013308 Bacteria 1310
60 Ga0163163_10159358 3300014325 Bacteria 2302
61 Ga0157380_10045962 3300014326 Bacteria 3428
62 Ga0157379_10043256 3300014968 Bacteria 4021
63 Ga0157376_10002874 3300014969 Bacteria 11798
64 Ga0157376_10016291 3300014969 Bacteria 5638
65 Ga0157376_10071385 3300014969 Bacteria 2951
66 Ga0157376_10142854 3300014969 Bacteria 2149
67 Ga0207684_10267354 3300025910 Bacteria 1475
68 Ga0207662_10002181 3300025918 Bacteria 9763
69 Ga0207662_10008729 3300025918 Bacteria 5559
70 Ga0207662_10152733 3300025918 Bacteria 1470
71 Ga0207659_10087607 3300025926 Bacteria 2318
72 Ga0207644_10131092 3300025931 Bacteria 1919
73 Ga0207644_10282804 3300025931 Bacteria 1332
74 Ga0207706_10014112 3300025933 Bacteria 7245
75 Ga0207711_10009072 3300025941 Bacteria 8307
76 Ga0207711_10009442 3300025941 Bacteria 8141
77 Ga0207651_10029056 3300025960 Bacteria 3498
78 Ga0207677_10023017 3300026023 Bacteria 3839
79 Ga0207703_10019836 3300026035 Bacteria 5255
80 Ga0207708_10020465 3300026075 Bacteria 4990
81 Ga0207641_10063009 3300026088 Bacteria 3166
82 Ga0207641_10134214 3300026088 Bacteria 2226
83 Ga0207676_10063127 3300026095 Bacteria 2941
84 Ga0207676_10133461 3300026095 Bacteria 2115
85 Ga0207675_100012804 3300026118 Bacteria 7837
86 Ga0207675_100137331 3300026118 Bacteria 2321
87 Ga0207428_10000002 3300027907 Bacteria 854851
88 Ga0207428_10014677 3300027907 Bacteria 6790
89 Ga0207428_10019823 3300027907 Bacteria 5729
90 Ga0207428_10035241 3300027907 Bacteria 4091
91 Ga0268264_10016235 3300028381 Bacteria 6097
92 Ga0268264_10201043 3300028381 Bacteria 1823
93 Ga0265330_10022419 3300031235 Bacteria 2874
94 Ga0265339_10019204 3300031249 Bacteria 4015
95 Ga0265314_10021125 3300031711 Bacteria 5014
96 Ga0373949_0000898 3300035090 Bacteria 9319
97 Ga0373956_0079596 3300035119 Bacteria 1502
98 Ga0373957_0032350 3300035120 Bacteria 1926
99 Ga0373933_0000490 3300035724 Bacteria 24669
100 Ga0373937_0002348 3300036401 Bacteria 15774
101 Ga0373937_0050595 3300036401 Bacteria 3806
102 Ga0373937_0113211 3300036401 Bacteria 2524
103 Ga0451577_0000069 3300042876 Bacteria 240386
104 Ga0453683_0000853 3300044673 Bacteria 29420
105 Ga0453684_0000293 3300044712 Bacteria 212235
106 Ga0453684_0000753 3300044712 Bacteria 112643
107 Ga0453684_0001087 3300044712 Bacteria 86101
108 Ga0453684_0024015 3300044712 Bacteria 8935
109 Ga0451576_0000186 3300045051 Bacteria 155881
110 Ga0451576_0200150 3300045051 Bacteria 2086
111 Ga0451576_0204118 3300045051 Bacteria 2064
112 Ga0451576_0357683 3300045051 Bacteria 1529
113 Ga0495582_0006172 3300046473 Bacteria 6669
114 Ga0495664_0028928 3300046477 Bacteria 3238
115 Ga0495618_0001596 3300046514 Bacteria 15142
116 Ga0495630_0003867 3300046517 Bacteria 10459
117 Ga0495663_0035683 3300046525 Bacteria 1494
118 Ga0495656_0004398 3300046615 Bacteria 4825
119 Ga0495656_0069489 3300046615 Bacteria 1560
120 Ga0495634_0001009 3300046642 Bacteria 26521
121 Ga0495635_0096734 3300046663 Bacteria 2018
122 Ga0495599_0110071 3300046678 Bacteria 1716
123 Ga0495658_0001651 3300046683 Bacteria 11598
124 Ga0495636_0051107 3300047318 Bacteria 1732
125 Ga0495674_0000781 3300047319 Bacteria 30261
126 Ga0495680_0012856 3300047322 Bacteria 7334
127 Ga0495677_0009289 3300047445 Bacteria 3633
128 Ga0496105_0238344 3300048908 Bacteria 1477
129 Ga0496108_0137413 3300048911 Bacteria 2104
130 Ga0496109_0131062 3300048912 Bacteria 2340
131 Ga0496110_0181591 3300048913 Bacteria 1911
132 Ga0496110_0375675 3300048913 Bacteria 1295
133 Ga0496114_0002572 3300048917 Bacteria 13860
134 Ga0496114_0191963 3300048917 Bacteria 1787
135 Ga0496115_0018304 3300048918 Bacteria 5375
136 Ga0496119_0002405 3300048922 Bacteria 20556
137 Ga0496120_0019105 3300048923 Bacteria 4394
138 Ga0496122_0070708 3300048925 Bacteria 2491
139 Ga0496124_0018336 3300048927 Bacteria 6555
140 Ga0496126_0015913 3300048929 Bacteria 7549
141 Ga0496126_0028646 3300048929 Bacteria 5304
142 Ga0501031_0000178 3300049568 Bacteria 36057
143 Ga0501032_0005307 3300049569 Bacteria 9584
144 Ga0501033_0016584 3300049570 Bacteria 5572
145 Ga0501033_0075326 3300049570 Bacteria 2477
146 Ga0501034_0000832 3300049571 Bacteria 45898
147 Ga0501036_0001578 3300049572 Bacteria 17636
148 Ga0501037_0000578 3300049573 Bacteria 28861
149 Ga0501038_0002141 3300049574 Bacteria 18331
150 Ga0501039_0000143 3300049575 Bacteria 48809
151 Ga0501040_0076189 3300049576 Bacteria 2319
152 Ga0501041_0008031 3300049577 Bacteria 6211
153 Ga0501042_0023723 3300049578 Bacteria 4296
154 Ga0501042_0035202 3300049578 Bacteria 3552
155 Ga0501043_0000705 3300049579 Bacteria 29630
156 Ga0501043_0169964 3300049579 Bacteria 1701
157 Ga0501046_0000223 3300049580 Bacteria 59026
158 Ga0501046_0001114 3300049580 Bacteria 26210
159 Ga0501046_0005886 3300049580 Bacteria 10928
160 Ga0501047_0000534 3300049581 Bacteria 41214
161 Ga0501048_0012780 3300049582 Bacteria 6242
162 Ga0501068_0052745 3300049584 Bacteria 2461
163 Ga0501070_0001207 3300049586 Bacteria 23088
164 Ga0501072_0010092 3300049588 Bacteria 7189
165 Ga0501073_0000616 3300049589 Bacteria 25056
166 Ga0501074_0015646 3300049590 Bacteria 5515
167 Ga0501074_0051169 3300049590 Bacteria 2981
168 Ga0501075_0009209 3300049591 Bacteria 6904
169 Ga0501076_0134540 3300049592 Bacteria 2006
170 Ga0501077_0050079 3300049593 Bacteria 2655
171 Ga0501079_0041216 3300049741 Bacteria 3563
172 Ga0501080_0001164 3300049742 Bacteria 21743
173 Ga0501081_0009764 3300049743 Bacteria 6254
174 Ga0501083_0013042 3300049744 Bacteria 5806
175 Ga0501035_0008128 3300049822 Bacteria 9778
176 Ga0501044_0002554 3300049823 Bacteria 20730
177 nmdc:mga09592_400747_c1 3300050508 Bacteria 1186
178 nmdc:mga08y16_12029_c1 3300050511 Bacteria 9092
179 nmdc:mga08y16_1822_c1 3300050511 Bacteria 21616
180 nmdc:mga08y16_21407_c1 3300050511 Bacteria 6830
181 nmdc:mga08y16_220215_c1 3300050511 Bacteria 1965
182 nmdc:mga08y16_3_c1 3300050511 Bacteria 936907
183 nmdc:mga08y16_4984_c1 3300050511 Bacteria 13881
184 nmdc:mga0n895_210737_c1 3300050512 Bacteria 1973
185 nmdc:mga0rr50_34375_c1 3300050513 Bacteria 3630
186 nmdc:mga08x19_204336_c1 3300050514 Bacteria 1355
187 Ga0495601_0034163 3300053077 Bacteria 3171
188 Ga0501084_0003781 3300054114 Bacteria 12307
189 Ga0501082_0021247 3300060353 Bacteria 5599
190 Ga0501082_0026917 3300060353 Bacteria 4955
191 Ga0501082_0262654 3300060353 Bacteria 1502
192 Ga0530510_0023159 3300061734 Bacteria 4423
193 2621297771 2619619299 Bacteria 6649820
194 2738670877 2738541265 Bacteria 6594665
195 2738749271 2738541282 Bacteria 6593925
196 2738858312 2738541303 Bacteria 6591772
197 2776910936 2775507049 Bacteria 6284736
198 2817493095 2816332298 Bacteria 6852809
199 2874612418 2874604998 Bacteria 7834745
200 2899804752 2899803654 Bacteria 5577784
201 2909399977 2909399089 Bacteria 3922598
202 8002062348 8002060224 Bacteria 4026565
203 8005316248 8005314921 Bacteria 7072929
204 Ga0496126_0081817
205 Ga0065707_10111336
206 Ga0065707_10151145
207 Ga0070658_10319034
208 Ga0068868_100021702
209 Ga0068868_100169765
210 Ga0070689_100003544
211 Ga0070689_100034147
212 Ga0070689_100090086
213 Ga0070687_100044289
214 Ga0070669_100115269
215 Ga0070671_100037735
216 Ga0070671_100332156
217 Ga0070673_100332642
218 Ga0070688_100001283
219 Ga0070688_100004715
220 Ga0070667_100003492
221 Ga0070667_100201192
222 Ga0070701_10104835
223 Ga0070694_100088654
224 Ga0070662_100048572
225 Ga0070686_100049774
226 Ga0070695_100000251
227 Ga0070704_100030564
228 Ga0068870_10103134
229 Ga0068863_100120348
230 Ga0068858_100009193
231 Ga0068860_100050101
232 Ga0068860_100174624
233 Ga0097621_100037310
234 Ga0097621_100051779
235 Ga0097621_100058584
236 Ga0068871_100004275
237 Ga0068871_100009762
238 Ga0068871_100040661
239 Ga0075428_100000003
240 Ga0075436_100249785
241 Ga0075435_100040151
242 Ga0111539_10000001
243 Ga0111539_10003176
244 Ga0111539_10006951
245 Ga0111539_10017126
246 Ga0111539_10023496
247 Ga0105242_10040559
248 Ga0105248_10014689
249 Ga0105248_10084448
250 Ga0105248_10132273
251 Ga0105248_10187170
252 Ga0157374_10024408
253 Ga0157374_10064109
254 Ga0157378_10078199
255 Ga0157378_10116210
256 Ga0157378_10120491
257 Ga0163162_10012062
258 Ga0163162_10016088
259 Ga0163162_10327657
260 Ga0157375_10008549
261 Ga0157375_10043169
262 Ga0157375_10554997
263 Ga0163163_10159358
264 Ga0157380_10045962
265 Ga0157379_10043256
266 Ga0157376_10002874
267 Ga0157376_10016291
268 Ga0157376_10071385
269 Ga0157376_10142854
270 Ga0207684_10267354
271 Ga0207662_10002181
272 Ga0207662_10008729
273 Ga0207662_10152733
274 Ga0207659_10087607
275 Ga0207644_10131092
276 Ga0207644_10282804
277 Ga0207706_10014112
278 Ga0207711_10009072
279 Ga0207711_10009442
280 Ga0207651_10029056
281 Ga0207677_10023017
282 Ga0207703_10019836
283 Ga0207708_10020465
284 Ga0207641_10063009
285 Ga0207641_10134214
286 Ga0207676_10063127
287 Ga0207676_10133461
288 Ga0207675_100012804
289 Ga0207675_100137331
290 Ga0207428_10000002
291 Ga0207428_10014677
292 Ga0207428_10019823
293 Ga0207428_10035241
294 Ga0268264_10016235
295 Ga0268264_10201043
296 Ga0265330_10022419
297 Ga0265339_10019204
298 Ga0265314_10021125
299 Ga0373949_0000898
300 Ga0373956_0079596
301 Ga0373957_0032350
302 Ga0373933_0000490
303 Ga0373937_0002348
304 Ga0373937_0050595
305 Ga0373937_0113211
306 Ga0451577_0000069
307 Ga0453683_0000853
308 Ga0453684_0000293
309 Ga0453684_0000753
310 Ga0453684_0001087
311 Ga0453684_0024015
312 Ga0451576_0000186
313 Ga0451576_0200150
314 Ga0451576_0204118
315 Ga0451576_0357683
316 Ga0495582_0006172
317 Ga0495664_0028928
318 Ga0495618_0001596
319 Ga0495630_0003867
320 Ga0495663_0035683
321 Ga0495656_0004398
322 Ga0495656_0069489
323 Ga0495634_0001009
324 Ga0495635_0096734
325 Ga0495599_0110071
326 Ga0495658_0001651
327 Ga0495636_0051107
328 Ga0495674_0000781
329 Ga0495680_0012856
330 Ga0495677_0009289
331 Ga0496105_0238344
332 Ga0496108_0137413
333 Ga0496109_0131062
334 Ga0496110_0181591
335 Ga0496110_0375675
336 Ga0496114_0002572
337 Ga0496114_0191963
338 Ga0496115_0018304
339 Ga0496119_0002405
340 Ga0496120_0019105
341 Ga0496122_0070708
342 Ga0496124_0018336
343 Ga0496126_0015913
344 Ga0496126_0028646
345 Ga0501031_0000178
346 Ga0501032_0005307
347 Ga0501033_0016584
348 Ga0501033_0075326
349 Ga0501034_0000832
350 Ga0501036_0001578
351 Ga0501037_0000578
352 Ga0501038_0002141
353 Ga0501039_0000143
354 Ga0501040_0076189
355 Ga0501041_0008031
356 Ga0501042_0023723
357 Ga0501042_0035202
358 Ga0501043_0000705
359 Ga0501043_0169964
360 Ga0501046_0000223
361 Ga0501046_0001114
362 Ga0501046_0005886
363 Ga0501047_0000534
364 Ga0501048_0012780
365 Ga0501068_0052745
366 Ga0501070_0001207
367 Ga0501072_0010092
368 Ga0501073_0000616
369 Ga0501074_0015646
370 Ga0501074_0051169
371 Ga0501075_0009209
372 Ga0501076_0134540
373 Ga0501077_0050079
374 Ga0501079_0041216
375 Ga0501080_0001164
376 Ga0501081_0009764
377 Ga0501083_0013042
378 Ga0501035_0008128
379 Ga0501044_0002554
380 nmdc:mga09592_400747_c1
381 nmdc:mga08y16_12029_c1
382 nmdc:mga08y16_1822_c1
383 nmdc:mga08y16_21407_c1
384 nmdc:mga08y16_220215_c1
385 nmdc:mga08y16_3_c1
386 nmdc:mga08y16_4984_c1
387 nmdc:mga0n895_210737_c1
388 nmdc:mga0rr50_34375_c1
389 nmdc:mga08x19_204336_c1
390 Ga0495601_0034163
391 Ga0501084_0003781
392 Ga0501082_0021247
393 Ga0501082_0026917
394 Ga0501082_0262654
395 Ga0530510_0023159
396 2621297771
397 2738670877
398 2738749271
399 2738858312
400 2776910936
401 2817493095
402 2874612418
403 2899804752
404 2909399977
405 8002062348
406 8005316248

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12698

ABC2_membrane_3

ABC-2 family transporter protein

22

350

0.87

PF01061

ABC2_membrane

ABC-2 type transporter

171

321

0.86

PF12679

ABC2_membrane_2

ABC-2 family transporter protein

8

291

0.71

Map