F311569

General Info

Members Datasets Scaffolds Average Seq Length
203 140 406 353

Family's Representative Sequence

Representative Sequence 3300044901|Ga0466960_0006195|Ga0466960_0006195_301_1473
Length 390
Sequence VSDTSSKHASENGAFLRVEDLRVHFPTSDGVVKATDGLSFELARGRTLGIVGESGSGKSVSSSAILGLHRGSRAQVSGRILLEGVDLLQLSDEEMRRRRGMDVAMIFQDPLSAMHPYYTVGNQLIEAYRVHNDVSKKAARTRAIEMLERVGIPQPDRRVDDYPHQFSGGMRQRAMIAMGLINNPGLLIADEPTTALDVTVQAQILDLLQDLQREFNSAIIIITHDLGVVAEMADDVLVMYAGKAVEYGPTKEILVRPEMPYTWGLLSSVPDVTSDVDAKLIPIPGNPPSLLNPPSGCAFHPRCPHTEKVPGRLCFTVQPDLVPGRQGMGHLKRCHLADPDAVYATEVLPEIDPGLASELAGDLGLDPATARTAGPATPAPTPAADEKDAQ

Samples

Sample ID Description Type Environment
1 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
2 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
15 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
16 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
17 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
18 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
19 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
22 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
25 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
26 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
27 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
28 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
29 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
47 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
48 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
49 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
50 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
51 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
52 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
53 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
54 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
55 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
56 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
57 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
58 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
59 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
60 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
61 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
62 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
63 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
64 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
65 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
66 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
67 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
68 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
69 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
70 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
71 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
72 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
73 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
74 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
75 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
76 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
77 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
78 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
79 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
80 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
81 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
82 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
83 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
84 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
85 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
86 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
87 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
95 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
96 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
97 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
98 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
99 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
100 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
102 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
103 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
104 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
105 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
106 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
107 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
108 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
109 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
110 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
111 3300059605 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 71R_SD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
112 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
113 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
114 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
115 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
116 2643221558 Rhizobium sp. Root149 Isolate Unclassified
117 2643221576 Nocardioides sp. Root614 Isolate Unclassified
118 2643221590 Nocardioides sp. Root682 Isolate Unclassified
119 2643221604 Nocardioides sp. Root190 Isolate Unclassified
120 2643221615 Nocardioides sp. Root224 Isolate Unclassified
121 2643221617 Nocardioides sp. Root79 Isolate Unclassified
122 2643221620 Nocardioides sp. Root240 Isolate Unclassified
123 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
124 2643221711 Terrabacter sp. Root85 Isolate Unclassified
125 2738541305 Nocardioides sp. CF167 Isolate Unclassified
126 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
127 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
128 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
129 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
130 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
131 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
132 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
133 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
134 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
135 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
136 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
137 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
138 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
139 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
140 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 84.73
Metatranscriptomes 2.96
Isolates 12.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.76
Nodule 0
Rhizoplane 12.81
Rhizosphere 58.62
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466960_0006195 3300044901 Bacteria 4791
2 JGI24744J21845_10003857 3300002077 Bacteria 3099
3 Ga0006562J51391_1002749 3300003578 Bacteria 5350
4 Ga0006562J51391_1010856 3300003578 Bacteria 5390
5 Ga0070658_10056081 3300005327 Bacteria 3202
6 Ga0070682_100004934 3300005337 Bacteria 7408
7 Ga0070660_100004977 3300005339 Bacteria 9187
8 Ga0070691_10042925 3300005341 Bacteria 2141
9 Ga0070675_100143508 3300005354 Bacteria 2042
10 Ga0070659_100028124 3300005366 Bacteria 4339
11 Ga0070667_100037173 3300005367 Bacteria 4082
12 Ga0070663_100296488 3300005455 Bacteria 1293
13 Ga0070685_10107303 3300005466 Bacteria 1715
14 Ga0070684_100064874 3300005535 Bacteria 3204
15 Ga0068866_10051276 3300005718 Bacteria 2100
16 Ga0075365_10001800 3300006038 Bacteria 10001
17 Ga0075365_10027883 3300006038 Bacteria 3597
18 Ga0075365_10033804 3300006038 Bacteria 3298
19 Ga0075365_10044895 3300006038 Bacteria 2897
20 Ga0075365_10056891 3300006038 Bacteria 2601
21 Ga0075365_10063823 3300006038 Bacteria 2466
22 Ga0075365_10063906 3300006038 Bacteria 2465
23 Ga0075365_10076330 3300006038 Bacteria 2262
24 Ga0075365_10083389 3300006038 Bacteria 2168
25 Ga0075365_10132617 3300006038 Bacteria 1725
26 Ga0075368_10001112 3300006042 Bacteria 8475
27 Ga0075363_100001577 3300006048 Bacteria 8758
28 Ga0075363_100103450 3300006048 Bacteria 1578
29 Ga0075369_10052622 3300006186 Bacteria 1765
30 Ga0068865_100008849 3300006881 Bacteria 6226
31 Ga0105245_10068877 3300009098 Bacteria 3208
32 Ga0105248_10280259 3300009177 Bacteria 1877
33 Ga0105238_10595037 3300009551 Bacteria 1113
34 Ga0105239_10041768 3300010375 Bacteria 5025
35 Ga0105239_10325635 3300010375 Bacteria 1733
36 Ga0163162_10438182 3300013306 Bacteria 1439
37 Ga0157375_10496238 3300013308 Bacteria 1385
38 Ga0157377_10022823 3300014745 Bacteria 3309
39 Ga0206351_10423125 3300020077 Bacteria 5786
40 Ga0154015_1032582 3300020610 Bacteria 1649
41 Ga0207656_10060696 3300025321 Bacteria 1658
42 Ga0207647_10009120 3300025904 Bacteria 7061
43 Ga0207647_10066269 3300025904 Bacteria 2190
44 Ga0207643_10001085 3300025908 Bacteria 16092
45 Ga0207671_10195603 3300025914 Bacteria 1578
46 Ga0207657_10049105 3300025919 Bacteria 3679
47 Ga0207659_10090626 3300025926 Bacteria 2283
48 Ga0207709_10012274 3300025935 Bacteria 4722
49 Ga0207704_10012201 3300025938 Bacteria 4258
50 Ga0207691_10023139 3300025940 Bacteria 5850
51 Ga0207661_10067012 3300025944 Bacteria 2918
52 Ga0207661_10132862 3300025944 Bacteria 2134
53 Ga0207661_10162161 3300025944 Bacteria 1941
54 Ga0207679_10126265 3300025945 Bacteria 2045
55 Ga0207658_10053592 3300025986 Bacteria 2981
56 Ga0207678_10267662 3300026067 Bacteria 1465
57 Ga0207708_10001503 3300026075 Bacteria 17374
58 Ga0207648_10003443 3300026089 Bacteria 16597
59 Ga0207676_10152050 3300026095 Bacteria 1995
60 Ga0207675_100043246 3300026118 Bacteria 4207
61 Ga0209813_10025656 3300027866 Bacteria 1698
62 Ga0307412_10123029 3300031911 Bacteria 1871
63 Ga0307409_100103507 3300031995 Bacteria 2368
64 Ga0307416_100051348 3300032002 Bacteria 3293
65 Ga0307414_10186058 3300032004 Bacteria 1676
66 Ga0307415_100002449 3300032126 Bacteria 9263
67 Ga0395900_0057859 3300037418 Bacteria 3991
68 Ga0395900_0202555 3300037418 Bacteria 2007
69 Ga0395898_0083378 3300037466 Bacteria 3081
70 Ga0395898_0203972 3300037466 Bacteria 1887
71 Ga0395905_0080113 3300037471 Bacteria 3060
72 Ga0395901_0103567 3300038443 Bacteria 2986
73 Ga0451793_1243690 3300041452 Bacteria 2217
74 Ga0439431_0009532 3300041997 Bacteria 2194
75 Ga0439445_0043709 3300042004 Bacteria 1196
76 Ga0439446_0014213 3300042156 Bacteria 2195
77 Ga0466972_0005357 3300044658 Bacteria 6427
78 Ga0466972_0029149 3300044658 Bacteria 2718
79 Ga0466972_0080983 3300044658 Bacteria 1546
80 Ga0466965_0028105 3300044683 Bacteria 2731
81 Ga0466966_0027165 3300044684 Bacteria 3732
82 Ga0466961_0048474 3300044693 Bacteria 2715
83 Ga0466961_0063420 3300044693 Bacteria 2348
84 Ga0466961_0075828 3300044693 Bacteria 2131
85 Ga0466961_0104438 3300044693 Bacteria 1784
86 Ga0466963_0087339 3300044694 Bacteria 2120
87 Ga0466964_0013453 3300044706 Bacteria 3105
88 Ga0466971_0032520 3300044719 Bacteria 2337
89 Ga0466968_0090494 3300044735 Bacteria 1355
90 Ga0466970_0015482 3300044765 Bacteria 3922
91 Ga0466970_0019025 3300044765 Bacteria 3558
92 Ga0466960_0000559 3300044901 Bacteria 12848
93 Ga0466960_0017432 3300044901 Bacteria 3130
94 Ga0466960_0027567 3300044901 Bacteria 2592
95 Ga0466958_0023654 3300045836 Bacteria 3609
96 Ga0466958_0034315 3300045836 Bacteria 3026
97 Ga0466958_0128842 3300045836 Bacteria 1588
98 Ga0466967_0120568 3300045976 Bacteria 2422
99 Ga0466967_0135166 3300045976 Bacteria 2292
100 Ga0466967_0182674 3300045976 Bacteria 1979
101 Ga0466967_0195306 3300045976 Bacteria 1914
102 Ga0495640_0072832 3300046533 Bacteria 2301
103 Ga0496100_0017106 3300048903 Bacteria 4274
104 Ga0496100_0044121 3300048903 Bacteria 2854
105 Ga0496101_0021597 3300048904 Bacteria 4423
106 Ga0496101_0028430 3300048904 Bacteria 3903
107 Ga0496102_0041277 3300048905 Bacteria 4176
108 Ga0496102_0188651 3300048905 Bacteria 1943
109 Ga0496102_0197050 3300048905 Bacteria 1898
110 Ga0496102_0231245 3300048905 Bacteria 1743
111 Ga0496103_0026059 3300048906 Bacteria 3537
112 Ga0496104_0016055 3300048907 Bacteria 6797
113 Ga0496104_0063245 3300048907 Bacteria 3509
114 Ga0496104_0109654 3300048907 Bacteria 2645
115 Ga0496105_0004041 3300048908 Bacteria 10980
116 Ga0496105_0013924 3300048908 Bacteria 6392
117 Ga0496105_0107347 3300048908 Bacteria 2304
118 Ga0496105_0521679 3300048908 Bacteria 930
119 Ga0496107_0088855 3300048910 Bacteria 2256
120 Ga0496110_0089682 3300048913 Bacteria 2748
121 Ga0496110_0103513 3300048913 Bacteria 2553
122 Ga0496111_0059878 3300048914 Bacteria 2759
123 Ga0496112_0357711 3300048915 Bacteria 1402
124 Ga0496113_0374669 3300048916 Bacteria 1142
125 Ga0496114_0032283 3300048917 Bacteria 4308
126 Ga0496114_0143264 3300048917 Bacteria 2070
127 Ga0496114_0292622 3300048917 Bacteria 1437
128 Ga0496117_0065202 3300048920 Bacteria 2478
129 Ga0496121_0039520 3300048924 Bacteria 4155
130 Ga0496126_0000208 3300048929 Bacteria 131604
131 Ga0496126_0032518 3300048929 Bacteria 4914
132 Ga0501033_0000924 3300049570 Bacteria 26818
133 Ga0501033_0003445 3300049570 Bacteria 13003
134 Ga0501034_0004285 3300049571 Bacteria 15913
135 Ga0501034_0168704 3300049571 Bacteria 2157
136 Ga0501034_0230194 3300049571 Bacteria 1803
137 Ga0501036_0004317 3300049572 Bacteria 11475
138 Ga0501037_0002300 3300049573 Bacteria 13788
139 Ga0501037_0067545 3300049573 Bacteria 2603
140 Ga0501037_0071345 3300049573 Bacteria 2527
141 Ga0501038_0004110 3300049574 Bacteria 13537
142 Ga0501040_0141006 3300049576 Bacteria 1698
143 Ga0501048_0001824 3300049582 Bacteria 16164
144 Ga0501069_0046612 3300049585 Bacteria 2405
145 Ga0501070_0011691 3300049586 Bacteria 7412
146 Ga0501070_0125838 3300049586 Bacteria 2118
147 Ga0501070_0264178 3300049586 Bacteria 1406
148 Ga0501071_0082379 3300049587 Bacteria 2356
149 Ga0501073_0067335 3300049589 Bacteria 2496
150 Ga0501074_0107886 3300049590 Bacteria 1993
151 Ga0501080_0077343 3300049742 Bacteria 3095
152 Ga0501035_0000157 3300049822 Bacteria 83835
153 Ga0501035_0001668 3300049822 Bacteria 22446
154 Ga0501045_0055935 3300049824 Bacteria 2886
155 Ga0501045_0122210 3300049824 Bacteria 1933
156 nmdc:mga03n38_16229_c1 3300050490 Bacteria 2894
157 nmdc:mga0yw44_156725_c1 3300050492 Bacteria 1489
158 nmdc:mga0yw44_28792_c1 3300050492 Bacteria 3200
159 nmdc:mga0yw44_37200_c1 3300050492 Bacteria 2873
160 nmdc:mga0yw44_4375_c1 3300050492 Bacteria 6466
161 nmdc:mga0yw44_608_c1 3300050492 Bacteria 12939
162 nmdc:mga0yw44_7290_c1 3300050492 Bacteria 5427
163 nmdc:mga0yw44_87686_c1 3300050492 Bacteria 1962
164 nmdc:mga06z11_5179_c1 3300050494 Bacteria 5206
165 nmdc:mga04h51_9116_c1 3300050495 Bacteria 2676
166 nmdc:mga0sz30_5360_c1 3300050516 Bacteria 4698
167 Ga0500644_0046717 3300053088 Bacteria 1465
168 Ga0500556_0000173 3300053104 Bacteria 52855
169 Ga0500556_0000724 3300053104 Bacteria 19897
170 Ga0500562_001144 3300053108 Bacteria 6527
171 Ga0500559_0000370 3300053136 Bacteria 33075
172 Ga0500559_0004230 3300053136 Bacteria 6870
173 Ga0587106_005609 3300059605 Bacteria 1442
174 Ga0587076_002054 3300059645 Bacteria 2195
175 Ga0501082_0276872 3300060353 Bacteria 1461
176 Ga0466962_0009582 3300061719 Bacteria 4644
177 Ga0466962_0117220 3300061719 Bacteria 1283
178 Ga0530510_0245387 3300061734 Bacteria 1334
179 2643814699 2643221558 Bacteria 5460675
180 2643891643 2643221576 Bacteria 5214352
181 2643960691 2643221590 Bacteria 5214697
182 2644035793 2643221604 Bacteria 5014917
183 2644093904 2643221615 Bacteria 5487866
184 2644102311 2643221617 Bacteria 5139111
185 2644115535 2643221620 Bacteria 5134593
186 2644323748 2643221657 Bacteria 5490246
187 2644610997 2643221711 Bacteria 4865335
188 2738868095 2738541305 Bacteria 4910150
189 2774392285 2773857762 Bacteria 5971770
190 2809196092 2808606439 Bacteria 5952208
191 2812333175 2811994874 Bacteria 5367947
192 2812351781 2811994878 Bacteria 5992952
193 2812375178 2811994882 Bacteria 4688362
194 2819427928 2818991318 Bacteria 5266538
195 2819666802 2818991458 Bacteria 4794049
196 2819691928 2818991462 Bacteria 4320267
197 2819729290 2818991469 Bacteria 4644110
198 2855386917 2855386786 Bacteria 4752232
199 2857484658 2857481737 Bacteria 4761446
200 2891048998 2891048133 Bacteria 4447501
201 2891970590 2891968417 Bacteria 5821697
202 8018151188 8018150411 Bacteria 5549903
203 8055432694 8055431914 Bacteria 4551896
204 Ga0466960_0006195
205 JGI24744J21845_10003857
206 Ga0006562J51391_1002749
207 Ga0006562J51391_1010856
208 Ga0070658_10056081
209 Ga0070682_100004934
210 Ga0070660_100004977
211 Ga0070691_10042925
212 Ga0070675_100143508
213 Ga0070659_100028124
214 Ga0070667_100037173
215 Ga0070663_100296488
216 Ga0070685_10107303
217 Ga0070684_100064874
218 Ga0068866_10051276
219 Ga0075365_10001800
220 Ga0075365_10027883
221 Ga0075365_10033804
222 Ga0075365_10044895
223 Ga0075365_10056891
224 Ga0075365_10063823
225 Ga0075365_10063906
226 Ga0075365_10076330
227 Ga0075365_10083389
228 Ga0075365_10132617
229 Ga0075368_10001112
230 Ga0075363_100001577
231 Ga0075363_100103450
232 Ga0075369_10052622
233 Ga0068865_100008849
234 Ga0105245_10068877
235 Ga0105248_10280259
236 Ga0105238_10595037
237 Ga0105239_10041768
238 Ga0105239_10325635
239 Ga0163162_10438182
240 Ga0157375_10496238
241 Ga0157377_10022823
242 Ga0206351_10423125
243 Ga0154015_1032582
244 Ga0207656_10060696
245 Ga0207647_10009120
246 Ga0207647_10066269
247 Ga0207643_10001085
248 Ga0207671_10195603
249 Ga0207657_10049105
250 Ga0207659_10090626
251 Ga0207709_10012274
252 Ga0207704_10012201
253 Ga0207691_10023139
254 Ga0207661_10067012
255 Ga0207661_10132862
256 Ga0207661_10162161
257 Ga0207679_10126265
258 Ga0207658_10053592
259 Ga0207678_10267662
260 Ga0207708_10001503
261 Ga0207648_10003443
262 Ga0207676_10152050
263 Ga0207675_100043246
264 Ga0209813_10025656
265 Ga0307412_10123029
266 Ga0307409_100103507
267 Ga0307416_100051348
268 Ga0307414_10186058
269 Ga0307415_100002449
270 Ga0395900_0057859
271 Ga0395900_0202555
272 Ga0395898_0083378
273 Ga0395898_0203972
274 Ga0395905_0080113
275 Ga0395901_0103567
276 Ga0451793_1243690
277 Ga0439431_0009532
278 Ga0439445_0043709
279 Ga0439446_0014213
280 Ga0466972_0005357
281 Ga0466972_0029149
282 Ga0466972_0080983
283 Ga0466965_0028105
284 Ga0466966_0027165
285 Ga0466961_0048474
286 Ga0466961_0063420
287 Ga0466961_0075828
288 Ga0466961_0104438
289 Ga0466963_0087339
290 Ga0466964_0013453
291 Ga0466971_0032520
292 Ga0466968_0090494
293 Ga0466970_0015482
294 Ga0466970_0019025
295 Ga0466960_0000559
296 Ga0466960_0017432
297 Ga0466960_0027567
298 Ga0466958_0023654
299 Ga0466958_0034315
300 Ga0466958_0128842
301 Ga0466967_0120568
302 Ga0466967_0135166
303 Ga0466967_0182674
304 Ga0466967_0195306
305 Ga0495640_0072832
306 Ga0496100_0017106
307 Ga0496100_0044121
308 Ga0496101_0021597
309 Ga0496101_0028430
310 Ga0496102_0041277
311 Ga0496102_0188651
312 Ga0496102_0197050
313 Ga0496102_0231245
314 Ga0496103_0026059
315 Ga0496104_0016055
316 Ga0496104_0063245
317 Ga0496104_0109654
318 Ga0496105_0004041
319 Ga0496105_0013924
320 Ga0496105_0107347
321 Ga0496105_0521679
322 Ga0496107_0088855
323 Ga0496110_0089682
324 Ga0496110_0103513
325 Ga0496111_0059878
326 Ga0496112_0357711
327 Ga0496113_0374669
328 Ga0496114_0032283
329 Ga0496114_0143264
330 Ga0496114_0292622
331 Ga0496117_0065202
332 Ga0496121_0039520
333 Ga0496126_0000208
334 Ga0496126_0032518
335 Ga0501033_0000924
336 Ga0501033_0003445
337 Ga0501034_0004285
338 Ga0501034_0168704
339 Ga0501034_0230194
340 Ga0501036_0004317
341 Ga0501037_0002300
342 Ga0501037_0067545
343 Ga0501037_0071345
344 Ga0501038_0004110
345 Ga0501040_0141006
346 Ga0501048_0001824
347 Ga0501069_0046612
348 Ga0501070_0011691
349 Ga0501070_0125838
350 Ga0501070_0264178
351 Ga0501071_0082379
352 Ga0501073_0067335
353 Ga0501074_0107886
354 Ga0501080_0077343
355 Ga0501035_0000157
356 Ga0501035_0001668
357 Ga0501045_0055935
358 Ga0501045_0122210
359 nmdc:mga03n38_16229_c1
360 nmdc:mga0yw44_156725_c1
361 nmdc:mga0yw44_28792_c1
362 nmdc:mga0yw44_37200_c1
363 nmdc:mga0yw44_4375_c1
364 nmdc:mga0yw44_608_c1
365 nmdc:mga0yw44_7290_c1
366 nmdc:mga0yw44_87686_c1
367 nmdc:mga06z11_5179_c1
368 nmdc:mga04h51_9116_c1
369 nmdc:mga0sz30_5360_c1
370 Ga0500644_0046717
371 Ga0500556_0000173
372 Ga0500556_0000724
373 Ga0500562_001144
374 Ga0500559_0000370
375 Ga0500559_0004230
376 Ga0587106_005609
377 Ga0587076_002054
378 Ga0501082_0276872
379 Ga0466962_0009582
380 Ga0466962_0117220
381 Ga0530510_0245387
382 2643814699
383 2643891643
384 2643960691
385 2644035793
386 2644093904
387 2644102311
388 2644115535
389 2644323748
390 2644610997
391 2738868095
392 2774392285
393 2809196092
394 2812333175
395 2812351781
396 2812375178
397 2819427928
398 2819666802
399 2819691928
400 2819729290
401 2855386917
402 2857484658
403 2891048998
404 2891970590
405 8018151188
406 8055432694

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

245

309

0.97

PF00005

ABC_tran

ABC transporter

35

194

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1f3o-assembly1.cif.gz_A-2 crystal structure of mj0796 atp-binding cassette 0.9312 5 238
7z17-assembly1.cif.gz_J e. coli c-p lyase bound to a phnk abc dimer in an open conformation 0.9309 2 258
7z19-assembly1.cif.gz_I e. coli c-p lyase bound to a single phnk abc domain 0.9308 2 257
3tuj-assembly1.cif.gz_C inward facing conformations of the metni methionine abc transporter: dm crystal form 0.9293 4 257
5xu1-assembly1.cif.gz_B structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.9279 2 237
ID Description Score Start End Superfamily
af_P75796_10_305_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.962 2 261 3.40.50.300
af_P9WQJ5_2_332_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9532 2 331 3.40.50.300
af_P77268_3_327_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9519 2 325 3.40.50.300
af_Q2FZR5_3_331_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9508 2 327 3.40.50.300
af_P0AAG0_1_323_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9474 2 325 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7U3H940-F1-model_v4 deleted 0.9648 2 323
AF-A0A7V3A3J9-F1-model_v4 ABC transporter ATP-binding protein 0.9611 3 325 GO:0005524
GO:0015833
GO:0016887
AF-A0A2S8VXA4-F1-model_v4 Microcin ABC transporter ATP-binding protein 0.9578 2 256 GO:0005524
GO:0005886
GO:0016887
AF-A0A537WAU2-F1-model_v4 ABC transporter ATP-binding protein 0.9572 23 259 GO:0005524
GO:0005886
GO:0015833
GO:0016887
AF-A0A8A7TJ59-F1-model_v4 deleted 0.9554 5 256

Map