F311533

General Info

Members Datasets Scaffolds Average Seq Length
203 131 406 460

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0017482|Ga0451577_0017482_2996_4507
Length 497
Sequence MSAAAAPLRLAHSFITAGSRALIALGPRYLPFADAASQGLPLSRLLRLSLFQVAVGMAAALLVGTLNRVMIVELNVPAWVVSLFVGLPLLFAPFRALVGFRSDNHRSHLGWRRVPYIWMGTLLQFGGLAIMPFALFILSGDTTLPEAAGRIVGPLAAGLAFLLVGAGMQTTQTAGLALATDLADEEARPRVVALMYVTLLIGMVGSGAVFSWFLTDFTEKRLIQVVQAAAVVTIFLNVIALWKQEARDPNRKPGRTDDTPAFRAAWKSFIADRRARRFLWAVGLGTAAFNMQDIVLEPYGGEILHLSVGSTSALTALLAAGGLAAFGIAARLLSRGANAEKVAAYGAVVGLPAFSCVIFAAPLEAPWMFRLGAVLIGFGAGLFSVGTLTAAMGLERKEHVGLALGAWGAVQATAAGGALRDVMSELAVRGALGEALVSPVTGYSIVYHTELLLLFMALIAIGPLVRPSRTVQVPHADPAGRSAGQGPGKFGLADLPG

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
7 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
8 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
9 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
10 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
11 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
12 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
13 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
14 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
15 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
16 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
17 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
18 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
19 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
26 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
28 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
29 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
30 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
31 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
32 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
33 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
34 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
35 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
36 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
37 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
38 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
39 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
40 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
41 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
42 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
43 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
44 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
45 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
46 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
47 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
48 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
49 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
50 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
51 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
52 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
53 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
54 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
55 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
56 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
57 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
58 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
59 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
60 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
61 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
62 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
63 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
64 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
65 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
66 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
67 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
68 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
71 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
72 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
73 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
74 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
75 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
84 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
85 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
86 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
87 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
88 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
89 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
90 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
91 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
92 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
93 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
94 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
95 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
96 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
97 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
98 2643221585 Pelomonas sp. Root662 Isolate Unclassified
99 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
100 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
101 2643221656 Pelomonas sp. Root405 Isolate Unclassified
102 2643221660 Methylibium sp. Root1272 Isolate Unclassified
103 2643221719 Rhizobium sp. Root274 Isolate Unclassified
104 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
105 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
106 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
107 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
108 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
109 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
110 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
111 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
112 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
113 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified
114 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
115 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
116 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
117 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
118 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
119 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
120 2902330777 Methylobacterium sp. 2A Isolate Unclassified
121 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
122 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
123 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
124 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
125 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
126 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
127 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
128 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
129 641522639 Methylobacterium sp. 4-46 Isolate Nodule
130 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
131 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 78.82
Metatranscriptomes 3.45
Isolates 17.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.39
Nodule 1.48
Rhizoplane 0
Rhizosphere 74.38
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0017482 3300042876 Bacteria 6624
2 Ga0065165_1000694 3300005262 Bacteria 48071
3 Ga0070658_10017278 3300005327 Bacteria 5773
4 Ga0070690_100134605 3300005330 Bacteria 1672
5 Ga0070661_100037128 3300005344 Bacteria 3544
6 Ga0070665_100003595 3300005548 Bacteria 16416
7 Ga0070665_100012151 3300005548 Bacteria 8682
8 Ga0070665_100016448 3300005548 Bacteria 7416
9 Ga0068859_100060297 3300005617 Bacteria 3823
10 Ga0068859_100350422 3300005617 Bacteria 1571
11 Ga0081540_1000942 3300005983 Bacteria 26195
12 Ga0081540_1021032 3300005983 Bacteria 3903
13 Ga0097620_100060294 3300006931 Bacteria 3823
14 Ga0097620_100350451 3300006931 Bacteria 1571
15 Ga0105240_10198312 3300009093 Bacteria 2354
16 Ga0105247_10085578 3300009101 Bacteria 1994
17 Ga0105248_10054870 3300009177 Bacteria 4470
18 Ga0163163_10088123 3300014325 Bacteria 3115
19 Ga0213875_10001417 3300021388 Bacteria 15584
20 Ga0213871_10007832 3300021441 Bacteria 2328
21 Ga0209563_107271 3300025230 Bacteria 1833
22 Ga0209758_1000557 3300025297 Bacteria 58827
23 Ga0207426_1000328 3300025302 Bacteria 90659
24 Ga0207710_10048579 3300025900 Bacteria 1899
25 Ga0207705_10012940 3300025909 Bacteria 6021
26 Ga0207695_10159031 3300025913 Bacteria 2192
27 Ga0207668_10026598 3300025972 Bacteria 3758
28 Ga0207703_10011526 3300026035 Bacteria 6877
29 Ga0207676_10178602 3300026095 Bacteria 1857
30 Ga0209966_1000013 3300027695 Bacteria 83121
31 Ga0268266_10000539 3300028379 Bacteria 52742
32 Ga0268266_10006555 3300028379 Bacteria 10643
33 Ga0268266_10036071 3300028379 Bacteria 4207
34 Ga0265337_1003714 3300028556 Bacteria 6525
35 Ga0265319_1016037 3300028563 Bacteria 2880
36 Ga0265334_10000294 3300028573 Bacteria 27911
37 Ga0265334_10001855 3300028573 Bacteria 10057
38 Ga0265318_10000555 3300028577 Bacteria 26355
39 Ga0265323_10001594 3300028653 Bacteria 10940
40 Ga0265336_10001303 3300028666 Bacteria 11675
41 Ga0265338_10000081 3300028800 Bacteria 176402
42 Ga0265338_10038471 3300028800 Bacteria 4532
43 Ga0265332_10001180 3300031238 Bacteria 15121
44 Ga0265332_10002671 3300031238 Bacteria 8945
45 Ga0265332_10011642 3300031238 Bacteria 3908
46 Ga0265328_10000102 3300031239 Bacteria 41869
47 Ga0265328_10002882 3300031239 Bacteria 7674
48 Ga0265328_10004435 3300031239 Bacteria 6096
49 Ga0265328_10020210 3300031239 Bacteria 2551
50 Ga0265320_10003895 3300031240 Bacteria 9869
51 Ga0265325_10028356 3300031241 Bacteria 3018
52 Ga0265329_10002274 3300031242 Bacteria 8806
53 Ga0265340_10010821 3300031247 Bacteria 4871
54 Ga0265340_10046750 3300031247 Bacteria 2110
55 Ga0265339_10067739 3300031249 Bacteria 1909
56 Ga0265331_10001308 3300031250 Bacteria 18466
57 Ga0265331_10018853 3300031250 Bacteria 3567
58 Ga0265331_10068012 3300031250 Bacteria 1670
59 Ga0265327_10000613 3300031251 Bacteria 58852
60 Ga0265327_10009227 3300031251 Bacteria 7156
61 Ga0265327_10021226 3300031251 Bacteria 3924
62 Ga0265316_10010270 3300031344 Bacteria 8542
63 Ga0265316_10170611 3300031344 Bacteria 1623
64 Ga0265313_10006553 3300031595 Bacteria 8211
65 Ga0316575_10000918 3300031665 Bacteria 9060
66 Ga0316575_10001332 3300031665 Bacteria 7901
67 Ga0316579_10000187 3300031691 Bacteria 18075
68 Ga0316579_10004244 3300031691 Bacteria 5675
69 Ga0265314_10007388 3300031711 Bacteria 9533
70 Ga0265314_10012247 3300031711 Bacteria 7016
71 Ga0265314_10030612 3300031711 Bacteria 3981
72 Ga0265342_10000087 3300031712 Bacteria 100045
73 Ga0265342_10001283 3300031712 Bacteria 23626
74 Ga0265342_10024438 3300031712 Bacteria 3814
75 Ga0316576_10001976 3300031727 Bacteria 11457
76 Ga0316576_10007224 3300031727 Bacteria 6972
77 Ga0316576_10024539 3300031727 Bacteria 4210
78 Ga0316576_10028623 3300031727 Bacteria 3930
79 Ga0316576_10028938 3300031727 Bacteria 3910
80 Ga0316576_10053466 3300031727 Bacteria 2942
81 Ga0316576_10068015 3300031727 Bacteria 2623
82 Ga0316578_10001626 3300031728 Bacteria 9307
83 Ga0316577_10000604 3300031733 Bacteria 14818
84 Ga0316577_10000984 3300031733 Bacteria 12723
85 Ga0316577_10014347 3300031733 Bacteria 4348
86 Ga0316583_10001453 3300032133 Bacteria 7913
87 Ga0316583_10007981 3300032133 Bacteria 3815
88 Ga0316585_10000076 3300032137 Bacteria 16627
89 Ga0316585_10001557 3300032137 Bacteria 6082
90 Ga0316585_10005082 3300032137 Bacteria 3701
91 Ga0316585_10014056 3300032137 Bacteria 2388
92 Ga0316580_10001759 3300032139 Bacteria 5788
93 Ga0316580_10007972 3300032139 Bacteria 3165
94 Ga0316593_10001023 3300032168 Bacteria 5797
95 Ga0307510_10006920 3300033180 Bacteria 13521
96 Ga0316588_1000004 3300033528 Bacteria 16160
97 Ga0316588_1000344 3300033528 Bacteria 5964
98 Ga0316588_1002102 3300033528 Bacteria 3417
99 Ga0316587_1000581 3300033529 Bacteria 3855
100 Ga0316596_1001115 3300033541 Bacteria 5242
101 Ga0316596_1001242 3300033541 Bacteria 5041
102 Ga0316574_0000045 3300035398 Bacteria 30677
103 Ga0316574_0001681 3300035398 Bacteria 10678
104 Ga0316574_0007590 3300035398 Bacteria 5957
105 Ga0316574_0025660 3300035398 Bacteria 3539
106 Ga0316574_0026028 3300035398 Bacteria 3517
107 Ga0316574_0028269 3300035398 Bacteria 3381
108 Ga0316574_0033643 3300035398 Bacteria 3120
109 Ga0316582_0000025 3300036647 Bacteria 35921
110 Ga0316582_0144248 3300036647 Bacteria 1607
111 Ga0316582_0148802 3300036647 Bacteria 1582
112 Ga0316584_0011263 3300036712 Bacteria 6278
113 Ga0316584_0014432 3300036712 Bacteria 5623
114 Ga0316584_0026836 3300036712 Bacteria 4236
115 Ga0316584_0050562 3300036712 Bacteria 3108
116 Ga0316584_0090118 3300036712 Bacteria 2295
117 Ga0316584_0095065 3300036712 Bacteria 2231
118 Ga0316584_0185019 3300036712 Bacteria 1541
119 Ga0316581_0000159 3300037588 Bacteria 10712
120 Ga0436364_0016899 3300037853 Bacteria 2236
121 Ga0436364_0328296 3300037853 Bacteria 143298
122 Ga0436365_1362421 3300039437 Bacteria 4306
123 Ga0436360_0781768 3300039438 Bacteria 11744
124 Ga0436363_1064797 3300039450 Bacteria 4147
125 Ga0451577_0001218 3300042876 Bacteria 35907
126 Ga0451577_0003534 3300042876 Bacteria 17289
127 Ga0451577_0003807 3300042876 Bacteria 16426
128 Ga0451577_0004153 3300042876 Bacteria 15518
129 Ga0451577_0018795 3300042876 Bacteria 6358
130 Ga0451577_0032084 3300042876 Bacteria 4732
131 Ga0451577_0108243 3300042876 Bacteria 2485
132 Ga0451577_0124816 3300042876 Bacteria 2307
133 Ga0453684_0021891 3300044712 Bacteria 9513
134 Ga0453684_0037442 3300044712 Bacteria 6658
135 Ga0453684_0167376 3300044712 Bacteria 2594
136 Ga0453684_0222611 3300044712 Bacteria 2185
137 Ga0451576_0001261 3300045051 Bacteria 44384
138 Ga0451576_0002473 3300045051 Bacteria 27484
139 Ga0451576_0002897 3300045051 Bacteria 24477
140 Ga0451576_0124439 3300045051 Bacteria 2686
141 Ga0495629_0047568 3300046459 Bacteria 3009
142 Ga0495620_0042636 3300046515 Bacteria 1981
143 Ga0495600_0048021 3300046809 Bacteria 2785
144 Ga0495680_0120377 3300047322 Bacteria 1939
145 Ga0496121_0038826 3300048924 Bacteria 4208
146 Ga0501031_0007872 3300049568 Bacteria 6936
147 Ga0501032_0083962 3300049569 Bacteria 2117
148 Ga0501033_0088714 3300049570 Bacteria 2263
149 Ga0501034_0036082 3300049571 Bacteria 5012
150 Ga0501036_0039573 3300049572 Bacteria 3989
151 Ga0501036_0165369 3300049572 Bacteria 1865
152 Ga0501037_0078509 3300049573 Bacteria 2395
153 Ga0501038_0058025 3300049574 Bacteria 3320
154 Ga0501043_0043014 3300049579 Bacteria 3551
155 Ga0501044_0020042 3300049823 Bacteria 7141
156 nmdc:mga0yw44_2439_c1 3300050492 Bacteria 7927
157 Ga0500635_0000034 3300053080 Bacteria 96919
158 Ga0495619_0031429 3300053085 Bacteria 3441
159 Ga0500641_0001445 3300053096 Bacteria 8463
160 Ga0500594_0005355 3300053118 Bacteria 2844
161 Ga0500595_000084 3300053119 Bacteria 66292
162 Ga0500652_029427 3300053131 Bacteria 2142
163 Ga0500559_0000109 3300053136 Bacteria 65246
164 Ga0500577_0000235 3300053142 Bacteria 14718
165 Ga0500589_000253 3300053147 Bacteria 10579
166 Ga0500622_0013857 3300053156 Bacteria 4342
167 Ga0500587_002152 3300053739 Bacteria 2810
168 2545674129 2545555834 Bacteria 8130841
169 2596371367 2595698237 Bacteria 6712432
170 2643937308 2643221585 Bacteria 5812563
171 2644299550 2643221653 Bacteria 4569637
172 2644301489 2643221654 Bacteria 5273570
173 2644318473 2643221656 Bacteria 5809961
174 2644338223 2643221660 Bacteria 4208257
175 2644657778 2643221719 Bacteria 4568197
176 2738708953 2738541275 Bacteria 4830863
177 2738744046 2738541281 Bacteria 5112672
178 2738847378 2738541301 Bacteria 4834102
179 2738863107 2738541304 Bacteria 4833665
180 2739295625 2738543022 Bacteria 4835059
181 2739353276 2738543032 Bacteria 5115625
182 2739357303 2738543033 Bacteria 4833336
183 2819244966 2818991272 Bacteria 4622173
184 2829750145 2829745981 Bacteria 5406054
185 2837681404 2837678835 Bacteria 5252418
186 2842336640 2842333319 Bacteria 8899485
187 2844315634 2844315083 Bacteria 8138177
188 2861692881 2861691609 Bacteria 5628931
189 2888389536 2888388044 Bacteria 7304136
190 2889306705 2889306138 Bacteria 6358934
191 2894777047 2894772417 Bacteria 5305674
192 2902332296 2902330777 Bacteria 6395352
193 2902409647 2902405164 Bacteria 6784948
194 2903732672 2903727486 Bacteria 8281579
195 2906605440 2906602504 Bacteria 8295279
196 2928102289 2928100450 Bacteria 4837635
197 2928126301 2928125067 Bacteria 5937560
198 2928961209 2928959182 Bacteria 4725774
199 2989780660 2989776772 Bacteria 4843317
200 3003671108 3003665799 Bacteria 7279786
201 641643893 641522639 Bacteria 7737025
202 8005250629 8005246636 Bacteria 4933972
203 8045864966 8045864390 Bacteria 5043873
204 Ga0451577_0017482
205 Ga0065165_1000694
206 Ga0070658_10017278
207 Ga0070690_100134605
208 Ga0070661_100037128
209 Ga0070665_100003595
210 Ga0070665_100012151
211 Ga0070665_100016448
212 Ga0068859_100060297
213 Ga0068859_100350422
214 Ga0081540_1000942
215 Ga0081540_1021032
216 Ga0097620_100060294
217 Ga0097620_100350451
218 Ga0105240_10198312
219 Ga0105247_10085578
220 Ga0105248_10054870
221 Ga0163163_10088123
222 Ga0213875_10001417
223 Ga0213871_10007832
224 Ga0209563_107271
225 Ga0209758_1000557
226 Ga0207426_1000328
227 Ga0207710_10048579
228 Ga0207705_10012940
229 Ga0207695_10159031
230 Ga0207668_10026598
231 Ga0207703_10011526
232 Ga0207676_10178602
233 Ga0209966_1000013
234 Ga0268266_10000539
235 Ga0268266_10006555
236 Ga0268266_10036071
237 Ga0265337_1003714
238 Ga0265319_1016037
239 Ga0265334_10000294
240 Ga0265334_10001855
241 Ga0265318_10000555
242 Ga0265323_10001594
243 Ga0265336_10001303
244 Ga0265338_10000081
245 Ga0265338_10038471
246 Ga0265332_10001180
247 Ga0265332_10002671
248 Ga0265332_10011642
249 Ga0265328_10000102
250 Ga0265328_10002882
251 Ga0265328_10004435
252 Ga0265328_10020210
253 Ga0265320_10003895
254 Ga0265325_10028356
255 Ga0265329_10002274
256 Ga0265340_10010821
257 Ga0265340_10046750
258 Ga0265339_10067739
259 Ga0265331_10001308
260 Ga0265331_10018853
261 Ga0265331_10068012
262 Ga0265327_10000613
263 Ga0265327_10009227
264 Ga0265327_10021226
265 Ga0265316_10010270
266 Ga0265316_10170611
267 Ga0265313_10006553
268 Ga0316575_10000918
269 Ga0316575_10001332
270 Ga0316579_10000187
271 Ga0316579_10004244
272 Ga0265314_10007388
273 Ga0265314_10012247
274 Ga0265314_10030612
275 Ga0265342_10000087
276 Ga0265342_10001283
277 Ga0265342_10024438
278 Ga0316576_10001976
279 Ga0316576_10007224
280 Ga0316576_10024539
281 Ga0316576_10028623
282 Ga0316576_10028938
283 Ga0316576_10053466
284 Ga0316576_10068015
285 Ga0316578_10001626
286 Ga0316577_10000604
287 Ga0316577_10000984
288 Ga0316577_10014347
289 Ga0316583_10001453
290 Ga0316583_10007981
291 Ga0316585_10000076
292 Ga0316585_10001557
293 Ga0316585_10005082
294 Ga0316585_10014056
295 Ga0316580_10001759
296 Ga0316580_10007972
297 Ga0316593_10001023
298 Ga0307510_10006920
299 Ga0316588_1000004
300 Ga0316588_1000344
301 Ga0316588_1002102
302 Ga0316587_1000581
303 Ga0316596_1001115
304 Ga0316596_1001242
305 Ga0316574_0000045
306 Ga0316574_0001681
307 Ga0316574_0007590
308 Ga0316574_0025660
309 Ga0316574_0026028
310 Ga0316574_0028269
311 Ga0316574_0033643
312 Ga0316582_0000025
313 Ga0316582_0144248
314 Ga0316582_0148802
315 Ga0316584_0011263
316 Ga0316584_0014432
317 Ga0316584_0026836
318 Ga0316584_0050562
319 Ga0316584_0090118
320 Ga0316584_0095065
321 Ga0316584_0185019
322 Ga0316581_0000159
323 Ga0436364_0016899
324 Ga0436364_0328296
325 Ga0436365_1362421
326 Ga0436360_0781768
327 Ga0436363_1064797
328 Ga0451577_0001218
329 Ga0451577_0003534
330 Ga0451577_0003807
331 Ga0451577_0004153
332 Ga0451577_0018795
333 Ga0451577_0032084
334 Ga0451577_0108243
335 Ga0451577_0124816
336 Ga0453684_0021891
337 Ga0453684_0037442
338 Ga0453684_0167376
339 Ga0453684_0222611
340 Ga0451576_0001261
341 Ga0451576_0002473
342 Ga0451576_0002897
343 Ga0451576_0124439
344 Ga0495629_0047568
345 Ga0495620_0042636
346 Ga0495600_0048021
347 Ga0495680_0120377
348 Ga0496121_0038826
349 Ga0501031_0007872
350 Ga0501032_0083962
351 Ga0501033_0088714
352 Ga0501034_0036082
353 Ga0501036_0039573
354 Ga0501036_0165369
355 Ga0501037_0078509
356 Ga0501038_0058025
357 Ga0501043_0043014
358 Ga0501044_0020042
359 nmdc:mga0yw44_2439_c1
360 Ga0500635_0000034
361 Ga0495619_0031429
362 Ga0500641_0001445
363 Ga0500594_0005355
364 Ga0500595_000084
365 Ga0500652_029427
366 Ga0500559_0000109
367 Ga0500577_0000235
368 Ga0500589_000253
369 Ga0500622_0013857
370 Ga0500587_002152
371 2545674129
372 2596371367
373 2643937308
374 2644299550
375 2644301489
376 2644318473
377 2644338223
378 2644657778
379 2738708953
380 2738744046
381 2738847378
382 2738863107
383 2739295625
384 2739353276
385 2739357303
386 2819244966
387 2829750145
388 2837681404
389 2842336640
390 2844315634
391 2861692881
392 2888389536
393 2889306705
394 2894777047
395 2902332296
396 2902409647
397 2903732672
398 2906605440
399 2928102289
400 2928126301
401 2928961209
402 2989780660
403 3003671108
404 641643893
405 8005250629
406 8045864966

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03209

PUCC

PUCC protein

65

469

0.97

PF07690

MFS_1

Major Facilitator Superfamily

48

419

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
8d2w-assembly1.cif.gz_A zebrafish mfsd2a isoform b in inward open ligand 2b conformation 0.7892 32 451
7yr5-assembly1.cif.gz_A embigin facilitates monocarboxylate transporter 1 localization to plasma membrane and transition to a decoupling state 0.7862 32 464
8sc3-assembly1.cif.gz_A human oct1 bound to fenoterol in inward-open conformation 0.7849 68 451
7yr5-assembly1.cif.gz_A embigin facilitates monocarboxylate transporter 1 localization to plasma membrane and transition to a decoupling state 0.779 32 464
8sc4-assembly1.cif.gz_A human oct1 bound to metformin in inward-open conformation 0.7757 72 451
ID Description Score Start End Superfamily
af_Q2FXH1_4_180_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9078 260 452 1.20.1250.20
af_P33026_213_392_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8982 260 453 1.20.1250.20
af_P31436_213_393_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.888 260 451 1.20.1250.20
af_A0A1D8PLV7_335_503_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8826 257 408 1.20.1250.20
af_P37621_16_394_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8816 33 458 1.20.1250.20
ID Description Score Start End GO Terms
AF-P95656-F1-model_v4 Protein PucC 0.9684 1 412 GO:0005886
GO:0030076
AF-A0A257PC35-F1-model_v4 MFS transporter 0.9669 39 457 GO:0016020
AF-A0A315D0F4-F1-model_v4 deleted 0.9545 1 456
AF-A0A2E9EZ75-F1-model_v4 MFS transporter 0.9518 10 359 GO:0016020
AF-A0A315D0F4-F1-model_v4 deleted 0.9483 1 456

Map