F311099

General Info

Members Datasets Scaffolds Average Seq Length
203 110 406 291

Family's Representative Sequence

Representative Sequence 3300006846|Ga0075430_100029025|Ga0075430_1000290253
Length 305
Sequence MPTRTGHIALAGAPNVGKSTLLNTLVGEHLAIVSPKPQATRLPVTGILTDGETQYIFHDLPGLLDPSYLLQERMREIAVATAREMDLILHLHPASQAPAPTFQRLAGLPEPLPVPLLTVYTKGDLLAPARRTELEQEALVLSAGEEWGIEQLLDRIRGYLPEREFEFDPEDIGTQPLRFFVVEYLREAAFEQLGDEVPYSFTAEVEEFREAERPIYIRVTLFVERESQKGIVIGQGGATIKAIGAHARARLEQLLGAPVYLDSWVKALPNWRKSAAALTRFGFPSPSPPASAGAISSRNQHDTRA

Samples

Sample ID Description Type Environment
1 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
24 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
46 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
47 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
48 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
49 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
50 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
51 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
52 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
53 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
54 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
55 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
56 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
57 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
58 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
59 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
60 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
61 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
62 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
63 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
64 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
65 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
66 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
67 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
68 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
69 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
70 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
71 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
72 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
73 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
74 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
82 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
83 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
84 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
85 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
86 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
87 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
88 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
89 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
90 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
91 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
92 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
93 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
94 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
95 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
96 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
97 3300049757 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_B_2_control Metagenome Rhizosphere
98 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
99 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
103 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
104 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
105 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
106 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
107 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
108 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
109 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
110 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.93
Rhizosphere 95.07
Stem 0
Stem Tuber 0
Unclassified 4.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075430_100029025 3300006846 Bacteria 4696
2 Ga0070683_100150371 3300005329 Bacteria 2207
3 Ga0070680_100009117 3300005336 Bacteria 7610
4 Ga0070680_100044821 3300005336 Bacteria 3594
5 Ga0070668_100050167 3300005347 Bacteria 3212
6 Ga0070675_100386145 3300005354 Unclassified 1247
7 Ga0070705_100027649 3300005440 Bacteria 3099
8 Ga0070705_100047041 3300005440 Bacteria 2491
9 Ga0070705_100075062 3300005440 Bacteria 2057
10 Ga0070708_100029086 3300005445 Bacteria 4762
11 Ga0070708_100060720 3300005445 Bacteria 3375
12 Ga0070681_10039855 3300005458 Bacteria 4709
13 Ga0070706_100007185 3300005467 Bacteria 10469
14 Ga0070707_100321055 3300005468 Bacteria 1505
15 Ga0070698_100069513 3300005471 Bacteria 3535
16 Ga0070698_100238997 3300005471 Bacteria 1750
17 Ga0070699_100001319 3300005518 Bacteria 22875
18 Ga0070699_100025642 3300005518 Bacteria 5081
19 Ga0070699_100160210 3300005518 Bacteria 1991
20 Ga0070679_100018406 3300005530 Bacteria 6779
21 Ga0070697_100037003 3300005536 Unclassified 3942
22 Ga0070697_100197125 3300005536 Bacteria 1711
23 Ga0070672_100118004 3300005543 Bacteria 2169
24 Ga0070695_100068258 3300005545 Bacteria 2321
25 Ga0070696_100000351 3300005546 Bacteria 28000
26 Ga0070704_100001722 3300005549 Bacteria 11934
27 Ga0070704_100050863 3300005549 Bacteria 2915
28 Ga0070664_100036316 3300005564 Bacteria 4139
29 Ga0070664_100201701 3300005564 Bacteria 1775
30 Ga0068859_100191330 3300005617 Bacteria 2130
31 Ga0068859_100661961 3300005617 Unclassified 1136
32 Ga0068864_100209340 3300005618 Bacteria 1795
33 Ga0075428_100035957 3300006844 Bacteria 5459
34 Ga0075430_100431077 3300006846 Bacteria 1088
35 Ga0075433_10260831 3300006852 Bacteria 1536
36 Ga0075434_100053168 3300006871 Bacteria 4025
37 Ga0075434_100158701 3300006871 Bacteria 2282
38 Ga0075429_100146037 3300006880 Bacteria 2070
39 Ga0097620_100191329 3300006931 Bacteria 2130
40 Ga0097620_100661852 3300006931 Unclassified 1136
41 Ga0114129_10074839 3300009147 Bacteria 4716
42 Ga0114129_10284089 3300009147 Bacteria 2210
43 Ga0114129_10322272 3300009147 Bacteria 2054
44 Ga0114129_10374824 3300009147 Unclassified 1880
45 Ga0105248_10050632 3300009177 Bacteria 4659
46 Ga0105249_10216645 3300009553 Bacteria 1882
47 Ga0163163_10008717 3300014325 Bacteria 9021
48 Ga0163163_10615053 3300014325 Unclassified 1150
49 Ga0207684_10222274 3300025910 Bacteria 1629
50 Ga0207707_10105188 3300025912 Bacteria 2467
51 Ga0207707_10126241 3300025912 Bacteria 2237
52 Ga0207660_10018687 3300025917 Bacteria 4624
53 Ga0207660_10108336 3300025917 Bacteria 2086
54 Ga0207660_10365374 3300025917 Bacteria 1158
55 Ga0207652_10016179 3300025921 Bacteria 6085
56 Ga0207646_10004757 3300025922 Bacteria 14614
57 Ga0207646_10169002 3300025922 Bacteria 1975
58 Ga0207646_10303011 3300025922 Bacteria 1443
59 Ga0207659_10131484 3300025926 Unclassified 1933
60 Ga0207659_10185143 3300025926 Bacteria 1653
61 Ga0207691_10135434 3300025940 Bacteria 2173
62 Ga0207679_10099942 3300025945 Bacteria 2266
63 Ga0207712_10324806 3300025961 Bacteria 1271
64 Ga0207668_10037692 3300025972 Bacteria 3238
65 Ga0207678_10164821 3300026067 Bacteria 1892
66 Ga0209999_1011566 3300027543 Bacteria 1598
67 Ga0209974_10022619 3300027876 Bacteria 2082
68 Ga0209974_10036636 3300027876 Bacteria 1629
69 Ga0268266_10261164 3300028379 Bacteria 1605
70 Ga0307408_100032986 3300031548 Bacteria 3614
71 Ga0307408_100592821 3300031548 Bacteria 984
72 Ga0307405_10026527 3300031731 Bacteria 3344
73 Ga0307405_10136889 3300031731 Bacteria 1701
74 Ga0307413_10002516 3300031824 Bacteria 7475
75 Ga0307413_10012012 3300031824 Bacteria 4289
76 Ga0307413_10022519 3300031824 Bacteria 3397
77 Ga0307413_10154961 3300031824 Bacteria 1601
78 Ga0307410_10025371 3300031852 Bacteria 3718
79 Ga0307410_10030780 3300031852 Bacteria 3434
80 Ga0307410_10324704 3300031852 Bacteria 1222
81 Ga0307410_10591450 3300031852 Bacteria 924
82 Ga0307406_10098604 3300031901 Bacteria 1984
83 Ga0307406_10131751 3300031901 Bacteria 1756
84 Ga0307407_10001781 3300031903 Bacteria 8052
85 Ga0307407_10003905 3300031903 Bacteria 6222
86 Ga0307407_10015085 3300031903 Bacteria 3805
87 Ga0307407_10073336 3300031903 Bacteria 2045
88 Ga0307407_10163935 3300031903 Bacteria 1457
89 Ga0307409_100028183 3300031995 Bacteria 3996
90 Ga0307409_100028255 3300031995 Bacteria 3992
91 Ga0307409_100032345 3300031995 Bacteria 3791
92 Ga0307409_100059186 3300031995 Bacteria 2980
93 Ga0307409_100182718 3300031995 Bacteria 1858
94 Ga0307416_100002280 3300032002 Bacteria 10932
95 Ga0307416_100013456 3300032002 Bacteria 5561
96 Ga0307416_100036498 3300032002 Bacteria 3770
97 Ga0307416_100194493 3300032002 Bacteria 1917
98 Ga0307416_100254290 3300032002 Bacteria 1712
99 Ga0307416_100316828 3300032002 Bacteria 1559
100 Ga0307416_100441167 3300032002 Bacteria 1352
101 Ga0307414_10018562 3300032004 Bacteria 4287
102 Ga0307414_10044172 3300032004 Bacteria 3041
103 Ga0307414_10239131 3300032004 Bacteria 1502
104 Ga0307411_10056240 3300032005 Bacteria 2592
105 Ga0307411_10062228 3300032005 Bacteria 2488
106 Ga0307411_10092892 3300032005 Bacteria 2111
107 Ga0307411_10113800 3300032005 Bacteria 1942
108 Ga0307411_10123469 3300032005 Bacteria 1878
109 Ga0307411_10344371 3300032005 Bacteria 1212
110 Ga0307415_100001763 3300032126 Bacteria 10571
111 Ga0307415_100013351 3300032126 Bacteria 4792
112 Ga0307415_100184628 3300032126 Bacteria 1640
113 Ga0307415_100223193 3300032126 Bacteria 1512
114 Ga0373939_0096129 3300035114 Bacteria 1009
115 Ga0373931_0283049 3300035691 Bacteria 1019
116 Ga0395905_0077856 3300037471 Bacteria 3107
117 Ga0439436_0045090 3300041404 Bacteria 1255
118 Ga0439457_019597 3300042014 Bacteria 1503
119 Ga0450891_005517 3300042129 Bacteria 1170
120 Ga0450896_009044 3300042133 Bacteria 1386
121 Ga0450898_013860 3300042134 Bacteria 1349
122 Ga0453683_0044734 3300044673 Bacteria 2777
123 Ga0451576_0104942 3300045051 Bacteria 2940
124 Ga0496102_0114630 3300048905 Unclassified 2515
125 Ga0496102_0114782 3300048905 Bacteria 2513
126 Ga0496102_0557759 3300048905 Unclassified 1068
127 Ga0496106_0271182 3300048909 Bacteria 1359
128 Ga0496108_0028070 3300048911 Bacteria 4655
129 Ga0496109_0019996 3300048912 Bacteria 5911
130 Ga0496110_0022215 3300048913 Bacteria 5384
131 Ga0496111_0053412 3300048914 Bacteria 2919
132 Ga0496112_0023807 3300048915 Bacteria 5857
133 Ga0496113_0005346 3300048916 Bacteria 8002
134 Ga0501034_0014091 3300049571 Bacteria 8237
135 Ga0501036_0344204 3300049572 Bacteria 1245
136 Ga0501036_0344662 3300049572 Bacteria 1244
137 Ga0501039_0165116 3300049575 Bacteria 1741
138 Ga0501040_0030505 3300049576 Bacteria 3642
139 Ga0501040_0056174 3300049576 Bacteria 2701
140 Ga0501041_0126223 3300049577 Bacteria 1593
141 Ga0501046_0126698 3300049580 Bacteria 1939
142 Ga0501046_0189159 3300049580 Bacteria 1536
143 Ga0501048_0078341 3300049582 Bacteria 2332
144 Ga0501048_0181662 3300049582 Bacteria 1491
145 Ga0501067_0000433 3300049583 Bacteria 22891
146 Ga0501067_0002983 3300049583 Bacteria 9336
147 Ga0501067_0010312 3300049583 Bacteria 5170
148 Ga0501068_0001305 3300049584 Bacteria 13208
149 Ga0501068_0004124 3300049584 Bacteria 7881
150 Ga0501068_0250664 3300049584 Bacteria 1128
151 Ga0501069_0001662 3300049585 Bacteria 11057
152 Ga0501069_0006671 3300049585 Bacteria 6041
153 Ga0501070_0036921 3300049586 Bacteria 4080
154 Ga0501070_0049118 3300049586 Bacteria 3503
155 Ga0501071_0005862 3300049587 Bacteria 7940
156 Ga0501071_0016921 3300049587 Bacteria 5018
157 Ga0501072_0006343 3300049588 Bacteria 9008
158 Ga0501072_0026486 3300049588 Bacteria 4521
159 Ga0501072_0031277 3300049588 Bacteria 4165
160 Ga0501072_0037161 3300049588 Bacteria 3819
161 Ga0501072_0428951 3300049588 Bacteria 1048
162 Ga0501073_0235505 3300049589 Bacteria 1264
163 Ga0501074_0004680 3300049590 Bacteria 9796
164 Ga0501075_0025491 3300049591 Bacteria 4344
165 Ga0501075_0134662 3300049591 Bacteria 1882
166 Ga0501076_0039978 3300049592 Bacteria 3684
167 Ga0501076_0041933 3300049592 Bacteria 3603
168 Ga0501076_0399306 3300049592 Bacteria 1130
169 Ga0501077_0026127 3300049593 Bacteria 3705
170 Ga0501077_0027490 3300049593 Bacteria 3612
171 Ga0501199_007473 3300049650 Bacteria 1131
172 Ga0501079_0025548 3300049741 Bacteria 4528
173 Ga0501079_0041887 3300049741 Bacteria 3536
174 Ga0501079_0051977 3300049741 Bacteria 3164
175 Ga0501080_0015869 3300049742 Bacteria 6949
176 Ga0501080_0017216 3300049742 Bacteria 6677
177 Ga0501081_0053749 3300049743 Bacteria 2781
178 Ga0501081_0072911 3300049743 Bacteria 2394
179 Ga0501083_0018216 3300049744 Bacteria 4894
180 Ga0501083_0056525 3300049744 Bacteria 2629
181 Ga0501083_0088529 3300049744 Bacteria 2047
182 Ga0501232_006786 3300049757 Unclassified 1188
183 Ga0501268_001630 3300049765 Bacteria 2834
184 Ga0501035_0372941 3300049822 Bacteria 1191
185 Ga0501045_0027552 3300049824 Bacteria 4096
186 Ga0501045_0127488 3300049824 Bacteria 1891
187 nmdc:mga05p37_196127_c1 3300050507 Bacteria 2448
188 nmdc:mga09592_141918_c1 3300050508 Bacteria 2071
189 nmdc:mga0qj67_17269_c1 3300050509 Bacteria 5484
190 nmdc:mga06r32_330582_c1 3300050510 Bacteria 1509
191 nmdc:mga08y16_394171_c1 3300050511 Bacteria 1418
192 nmdc:mga08x19_105994_c1 3300050514 Bacteria 1870
193 nmdc:mga0a205_513464_c1 3300050515 Bacteria 1055
194 nmdc:mga0a205_647349_c1 3300050515 Bacteria 908
195 Ga0501084_0003287 3300054114 Bacteria 13083
196 Ga0501084_0014164 3300054114 Bacteria 6604
197 Ga0501084_0066317 3300054114 Bacteria 3020
198 Ga0501084_0133440 3300054114 Bacteria 2090
199 Ga0501082_0001720 3300060353 Bacteria 19317
200 Ga0501082_0127687 3300060353 Bacteria 2205
201 Ga0501082_0215983 3300060353 Bacteria 1668
202 Ga0530510_0105731 3300061734 Bacteria 2060
203 Ga0530510_0197014 3300061734 Bacteria 1496
204 Ga0075430_100029025
205 Ga0070683_100150371
206 Ga0070680_100009117
207 Ga0070680_100044821
208 Ga0070668_100050167
209 Ga0070675_100386145
210 Ga0070705_100027649
211 Ga0070705_100047041
212 Ga0070705_100075062
213 Ga0070708_100029086
214 Ga0070708_100060720
215 Ga0070681_10039855
216 Ga0070706_100007185
217 Ga0070707_100321055
218 Ga0070698_100069513
219 Ga0070698_100238997
220 Ga0070699_100001319
221 Ga0070699_100025642
222 Ga0070699_100160210
223 Ga0070679_100018406
224 Ga0070697_100037003
225 Ga0070697_100197125
226 Ga0070672_100118004
227 Ga0070695_100068258
228 Ga0070696_100000351
229 Ga0070704_100001722
230 Ga0070704_100050863
231 Ga0070664_100036316
232 Ga0070664_100201701
233 Ga0068859_100191330
234 Ga0068859_100661961
235 Ga0068864_100209340
236 Ga0075428_100035957
237 Ga0075430_100431077
238 Ga0075433_10260831
239 Ga0075434_100053168
240 Ga0075434_100158701
241 Ga0075429_100146037
242 Ga0097620_100191329
243 Ga0097620_100661852
244 Ga0114129_10074839
245 Ga0114129_10284089
246 Ga0114129_10322272
247 Ga0114129_10374824
248 Ga0105248_10050632
249 Ga0105249_10216645
250 Ga0163163_10008717
251 Ga0163163_10615053
252 Ga0207684_10222274
253 Ga0207707_10105188
254 Ga0207707_10126241
255 Ga0207660_10018687
256 Ga0207660_10108336
257 Ga0207660_10365374
258 Ga0207652_10016179
259 Ga0207646_10004757
260 Ga0207646_10169002
261 Ga0207646_10303011
262 Ga0207659_10131484
263 Ga0207659_10185143
264 Ga0207691_10135434
265 Ga0207679_10099942
266 Ga0207712_10324806
267 Ga0207668_10037692
268 Ga0207678_10164821
269 Ga0209999_1011566
270 Ga0209974_10022619
271 Ga0209974_10036636
272 Ga0268266_10261164
273 Ga0307408_100032986
274 Ga0307408_100592821
275 Ga0307405_10026527
276 Ga0307405_10136889
277 Ga0307413_10002516
278 Ga0307413_10012012
279 Ga0307413_10022519
280 Ga0307413_10154961
281 Ga0307410_10025371
282 Ga0307410_10030780
283 Ga0307410_10324704
284 Ga0307410_10591450
285 Ga0307406_10098604
286 Ga0307406_10131751
287 Ga0307407_10001781
288 Ga0307407_10003905
289 Ga0307407_10015085
290 Ga0307407_10073336
291 Ga0307407_10163935
292 Ga0307409_100028183
293 Ga0307409_100028255
294 Ga0307409_100032345
295 Ga0307409_100059186
296 Ga0307409_100182718
297 Ga0307416_100002280
298 Ga0307416_100013456
299 Ga0307416_100036498
300 Ga0307416_100194493
301 Ga0307416_100254290
302 Ga0307416_100316828
303 Ga0307416_100441167
304 Ga0307414_10018562
305 Ga0307414_10044172
306 Ga0307414_10239131
307 Ga0307411_10056240
308 Ga0307411_10062228
309 Ga0307411_10092892
310 Ga0307411_10113800
311 Ga0307411_10123469
312 Ga0307411_10344371
313 Ga0307415_100001763
314 Ga0307415_100013351
315 Ga0307415_100184628
316 Ga0307415_100223193
317 Ga0373939_0096129
318 Ga0373931_0283049
319 Ga0395905_0077856
320 Ga0439436_0045090
321 Ga0439457_019597
322 Ga0450891_005517
323 Ga0450896_009044
324 Ga0450898_013860
325 Ga0453683_0044734
326 Ga0451576_0104942
327 Ga0496102_0114630
328 Ga0496102_0114782
329 Ga0496102_0557759
330 Ga0496106_0271182
331 Ga0496108_0028070
332 Ga0496109_0019996
333 Ga0496110_0022215
334 Ga0496111_0053412
335 Ga0496112_0023807
336 Ga0496113_0005346
337 Ga0501034_0014091
338 Ga0501036_0344204
339 Ga0501036_0344662
340 Ga0501039_0165116
341 Ga0501040_0030505
342 Ga0501040_0056174
343 Ga0501041_0126223
344 Ga0501046_0126698
345 Ga0501046_0189159
346 Ga0501048_0078341
347 Ga0501048_0181662
348 Ga0501067_0000433
349 Ga0501067_0002983
350 Ga0501067_0010312
351 Ga0501068_0001305
352 Ga0501068_0004124
353 Ga0501068_0250664
354 Ga0501069_0001662
355 Ga0501069_0006671
356 Ga0501070_0036921
357 Ga0501070_0049118
358 Ga0501071_0005862
359 Ga0501071_0016921
360 Ga0501072_0006343
361 Ga0501072_0026486
362 Ga0501072_0031277
363 Ga0501072_0037161
364 Ga0501072_0428951
365 Ga0501073_0235505
366 Ga0501074_0004680
367 Ga0501075_0025491
368 Ga0501075_0134662
369 Ga0501076_0039978
370 Ga0501076_0041933
371 Ga0501076_0399306
372 Ga0501077_0026127
373 Ga0501077_0027490
374 Ga0501199_007473
375 Ga0501079_0025548
376 Ga0501079_0041887
377 Ga0501079_0051977
378 Ga0501080_0015869
379 Ga0501080_0017216
380 Ga0501081_0053749
381 Ga0501081_0072911
382 Ga0501083_0018216
383 Ga0501083_0056525
384 Ga0501083_0088529
385 Ga0501232_006786
386 Ga0501268_001630
387 Ga0501035_0372941
388 Ga0501045_0027552
389 Ga0501045_0127488
390 nmdc:mga05p37_196127_c1
391 nmdc:mga09592_141918_c1
392 nmdc:mga0qj67_17269_c1
393 nmdc:mga06r32_330582_c1
394 nmdc:mga08y16_394171_c1
395 nmdc:mga08x19_105994_c1
396 nmdc:mga0a205_513464_c1
397 nmdc:mga0a205_647349_c1
398 Ga0501084_0003287
399 Ga0501084_0014164
400 Ga0501084_0066317
401 Ga0501084_0133440
402 Ga0501082_0001720
403 Ga0501082_0127687
404 Ga0501082_0215983
405 Ga0530510_0105731
406 Ga0530510_0197014

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07650

KH_2

KH domain

196

272

0.94

PF01926

MMR_HSR1

50S ribosome-binding GTPase

7

122

0.79

PF02421

FeoB_N

Ferrous iron transport protein B

6

97

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
3r9w-assembly1.cif.gz_A crystal structure of era in complex with mggdpnp and nucleotides 1506-1542 of 16s ribosomal rna 0.8706 1 281
7c1o-assembly1.cif.gz_A crystal structure of aquifex aeolicus era y63a bound to gdp.alf4- 0.8704 3 281
1wf3-assembly1.cif.gz_A crystal structure of gtp-binding protein tt1341 from thermus thermophilus hb8 0.8331 2 281
3r9w-assembly1.cif.gz_A crystal structure of era in complex with mggdpnp and nucleotides 1506-1542 of 16s ribosomal rna 0.8264 1 281
7c1o-assembly1.cif.gz_A crystal structure of aquifex aeolicus era y63a bound to gdp.alf4- 0.8207 3 281
ID Description Score Start End Superfamily
3ieuB02 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9458 174 265 3.30.300.20
af_B9FI63_305_419_3.30.300.20 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9215 172 281 3.30.300.20
af_Q2FY06_184_297_3.30.300.20 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9181 173 284 3.30.300.20
af_Q9CZU4_341_437_3.30.300.20 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9135 172 266 3.30.300.20
3r9xA02 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain 0.9134 173 281 3.30.300.20
ID Description Score Start End GO Terms
AF-A0A3D3JYY3-F1-model_v4 GTPase Era 0.955 175 281 GO:0000028
GO:0005525
GO:0005829
GO:0019843
GO:0043024
AF-A0A4Q6E1Q0-F1-model_v4 GTPase Era 0.9526 186 281 GO:0000028
GO:0005525
GO:0019843
GO:0043024
AF-A0A533SMJ8-F1-model_v4 GTPase Era 0.9464 201 281 GO:0000028
GO:0005525
GO:0005829
GO:0019843
GO:0043024
AF-A0A3C0GP75-F1-model_v4 GTPase Era 0.9459 146 281 GO:0000028
GO:0005525
GO:0005829
GO:0019843
GO:0043024
AF-A0A4Q3DXQ7-F1-model_v4 GTPase Era 0.9452 201 281 GO:0000028
GO:0005525
GO:0005829
GO:0019843
GO:0043024

Map