F311060

General Info

Members Datasets Scaffolds Average Seq Length
203 135 406 309

Family's Representative Sequence

Representative Sequence 3300006042|Ga0075368_10002567|Ga0075368_100025673
Length 373
Sequence MIELTDEVATALEAGLPVVALESTIISHGMPYPQNVAMATEVEDVVRDHGAVPATIAVLGGVPKVGLSAGDLELLASDPTVVKASVRDLPTIIARGGHGATTVAATMRLASLAGIRVFVTGGLGGVHRGAEASFDVSADLTELSTTPVCVVCAGVKSILDIGLTLEKLETLGVPVLVDGSDEFPSFYSRSSGFTAPLRADGPDEIARAMDAAWSLGLTSGLVVAHPIPPADEIPATEMDPVIGRALADLDARGIGGRDATPYLLGRIVELTDGRSLTANIALVRENARVGAEIAVRYAVRLRDQSRATIEAREARPRHHHTLGEVMSTGPADDEPLSDEVQPDEHTPFDEADEADVLEQELEVPEDDEDYERG

Samples

Sample ID Description Type Environment
1 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
26 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
37 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
46 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
47 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
48 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
49 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
50 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
51 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
52 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
53 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
54 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
55 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
56 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
57 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
58 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
59 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
60 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
61 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
62 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
63 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
64 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
65 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
66 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
67 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
68 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
71 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
72 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
73 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
74 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
75 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
76 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
77 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
78 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
79 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
80 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
81 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
82 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
83 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
99 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
100 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
101 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
102 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
103 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
104 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
105 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
106 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
107 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
108 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
109 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
110 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
112 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
113 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
114 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
115 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
116 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
117 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
118 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
119 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
120 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
121 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
122 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
123 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
124 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
125 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
126 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
127 2643221615 Nocardioides sp. Root224 Isolate Unclassified
128 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
129 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
130 2738541305 Nocardioides sp. CF167 Isolate Unclassified
131 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
132 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
133 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
134 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
135 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.58
Metatranscriptomes 0.49
Isolates 4.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.32
Nodule 0
Rhizoplane 6.9
Rhizosphere 71.92
Stem 0
Stem Tuber 0
Unclassified 0.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075368_10002567 3300006042 Bacteria 5951
2 JGI24735J21928_10043069 3300002067 Bacteria 1314
3 Ga0070682_100148706 3300005337 Bacteria 1604
4 Ga0070687_100073536 3300005343 Bacteria 1843
5 Ga0070668_100110678 3300005347 Bacteria 2186
6 Ga0070675_100132478 3300005354 Bacteria 2125
7 Ga0070671_100225495 3300005355 Bacteria 1590
8 Ga0070673_100057822 3300005364 Bacteria 3065
9 Ga0070667_100008167 3300005367 Bacteria 8678
10 Ga0070700_100024814 3300005441 Bacteria 3525
11 Ga0070678_100233972 3300005456 Bacteria 1533
12 Ga0068867_100009052 3300005459 Bacteria 7025
13 Ga0068867_100019159 3300005459 Bacteria 4874
14 Ga0068853_100144519 3300005539 Bacteria 2137
15 Ga0070672_100060156 3300005543 Bacteria 2991
16 Ga0070686_100054945 3300005544 Bacteria 2549
17 Ga0070686_100338981 3300005544 Bacteria 1126
18 Ga0070664_100597843 3300005564 Bacteria 1023
19 Ga0068854_100085433 3300005578 Bacteria 2337
20 Ga0068866_10005985 3300005718 Bacteria 5061
21 Ga0068861_100008383 3300005719 Bacteria 7113
22 Ga0068870_10040357 3300005840 Bacteria 2420
23 Ga0081539_10025474 3300005985 Bacteria 3808
24 Ga0081539_10026265 3300005985 Bacteria 3721
25 Ga0075365_10207226 3300006038 Bacteria 1374
26 Ga0075365_10251172 3300006038 Bacteria 1243
27 Ga0075368_10037063 3300006042 Bacteria 1906
28 Ga0075363_100001711 3300006048 Bacteria 8526
29 Ga0075363_100002210 3300006048 Bacteria 7854
30 Ga0075363_100025042 3300006048 Bacteria 3039
31 Ga0075367_10006075 3300006178 Bacteria 6068
32 Ga0075367_10010918 3300006178 Bacteria 4787
33 Ga0075370_10016059 3300006353 Bacteria 4022
34 Ga0075370_10019107 3300006353 Bacteria 3727
35 Ga0068865_100009097 3300006881 Bacteria 6148
36 Ga0068865_100038865 3300006881 Bacteria 3224
37 Ga0105245_10025411 3300009098 Bacteria 5209
38 Ga0105243_10008891 3300009148 Bacteria 7681
39 Ga0105243_10011259 3300009148 Bacteria 6765
40 Ga0105243_10524887 3300009148 Bacteria 1127
41 Ga0105248_10039504 3300009177 Bacteria 5286
42 Ga0105249_10057207 3300009553 Bacteria 3572
43 Ga0157370_10389726 3300013104 Bacteria 1283
44 Ga0157372_10061547 3300013307 Bacteria 4204
45 Ga0157372_10297662 3300013307 Bacteria 1877
46 Ga0157375_10232373 3300013308 Bacteria 2003
47 Ga0163163_10013891 3300014325 Bacteria 7386
48 Ga0163163_10203657 3300014325 Bacteria 2027
49 Ga0157380_10004679 3300014326 Bacteria 9529
50 Ga0157380_10012463 3300014326 Bacteria 6169
51 Ga0157377_10071803 3300014745 Bacteria 2002
52 Ga0206353_12033860 3300020082 Bacteria 2372
53 Ga0213875_10022928 3300021388 Bacteria 2985
54 Ga0207662_10014239 3300025918 Bacteria 4459
55 Ga0207706_10035171 3300025933 Bacteria 4456
56 Ga0207709_10035556 3300025935 Bacteria 2946
57 Ga0207703_10532338 3300026035 Bacteria 1106
58 Ga0207648_10004773 3300026089 Bacteria 13846
59 Ga0207676_10217353 3300026095 Bacteria 1700
60 Ga0209813_10010058 3300027866 Bacteria 2436
61 Ga0207428_10000045 3300027907 Bacteria 194471
62 Ga0265340_10001669 3300031247 Bacteria 12768
63 Ga0307405_10041023 3300031731 Bacteria 2807
64 Ga0307410_10017864 3300031852 Bacteria 4271
65 Ga0307407_10095206 3300031903 Bacteria 1835
66 Ga0307412_10261672 3300031911 Bacteria 1349
67 Ga0307412_10309954 3300031911 Bacteria 1251
68 Ga0307409_100000415 3300031995 Bacteria 18088
69 Ga0307409_100256376 3300031995 Bacteria 1602
70 Ga0307416_100012664 3300032002 Bacteria 5694
71 Ga0395900_0416323 3300037418 Bacteria 1305
72 Ga0436364_0150921 3300037853 Bacteria 3355
73 Ga0436364_0224903 3300037853 Bacteria 5712
74 Ga0436364_0350303 3300037853 Bacteria 2020
75 Ga0436364_0629792 3300037853 Bacteria 50732
76 Ga0395901_0021805 3300038443 Bacteria 6566
77 Ga0400483_190423 3300039062 Unclassified 1666
78 Ga0436365_1435938 3300039437 Bacteria 3529
79 Ga0436365_1874718 3300039437 Bacteria 24729
80 Ga0436361_0992303 3300039447 Bacteria 2373
81 Ga0436363_0807126 3300039450 Bacteria 17575
82 Ga0436363_1522253 3300039450 Bacteria 1882
83 Ga0466966_0126810 3300044684 Bacteria 1565
84 Ga0466966_0181699 3300044684 Bacteria 1276
85 Ga0466961_0030079 3300044693 Bacteria 3490
86 Ga0466963_0034107 3300044694 Bacteria 3310
87 Ga0466963_0063945 3300044694 Bacteria 2464
88 Ga0466963_0151664 3300044694 Bacteria 1609
89 Ga0466964_0008632 3300044706 Bacteria 3831
90 Ga0466964_0043098 3300044706 Bacteria 1830
91 Ga0466971_0011640 3300044719 Bacteria 3852
92 Ga0466970_0089552 3300044765 Bacteria 1669
93 Ga0466970_0155013 3300044765 Bacteria 1266
94 Ga0466957_0020310 3300044842 Bacteria 3908
95 Ga0466957_0053130 3300044842 Bacteria 2469
96 Ga0466957_0072407 3300044842 Bacteria 2133
97 Ga0466960_0000569 3300044901 Bacteria 12780
98 Ga0451576_0775094 3300045051 Bacteria 1007
99 Ga0466958_0111665 3300045836 Bacteria 1707
100 Ga0466967_0097338 3300045976 Bacteria 2686
101 Ga0466967_0497149 3300045976 Bacteria 1196
102 Ga0466967_0671735 3300045976 Bacteria 1025
103 Ga0496100_0372057 3300048903 Unclassified 1084
104 Ga0496101_0002474 3300048904 Bacteria 11347
105 Ga0496102_0022311 3300048905 Bacteria 5609
106 Ga0496102_0036862 3300048905 Bacteria 4408
107 Ga0496103_0116782 3300048906 Bacteria 1698
108 Ga0496103_0229428 3300048906 Bacteria 1194
109 Ga0496104_0007142 3300048907 Bacteria 9846
110 Ga0496105_0320577 3300048908 Bacteria 1242
111 Ga0496106_0137077 3300048909 Bacteria 1923
112 Ga0496109_0109449 3300048912 Bacteria 2568
113 Ga0496110_0204562 3300048913 Bacteria 1794
114 Ga0496111_0024566 3300048914 Bacteria 4245
115 Ga0496114_0007960 3300048917 Bacteria 8387
116 Ga0496114_0032923 3300048917 Bacteria 4269
117 Ga0501031_0008781 3300049568 Bacteria 6572
118 Ga0501031_0020200 3300049568 Bacteria 4341
119 Ga0501032_0023273 3300049569 Bacteria 4285
120 Ga0501032_0033085 3300049569 Bacteria 3544
121 Ga0501033_0034414 3300049570 Bacteria 3801
122 Ga0501033_0175361 3300049570 Bacteria 1538
123 Ga0501034_0042440 3300049571 Bacteria 4604
124 Ga0501036_0005303 3300049572 Bacteria 10434
125 Ga0501036_0020009 3300049572 Bacteria 5619
126 Ga0501037_0112801 3300049573 Bacteria 1958
127 Ga0501038_0038688 3300049574 Bacteria 4175
128 Ga0501039_0001296 3300049575 Bacteria 18258
129 Ga0501039_0031905 3300049575 Bacteria 4061
130 Ga0501040_0000447 3300049576 Bacteria 24511
131 Ga0501040_0029217 3300049576 Bacteria 3720
132 Ga0501041_0000086 3300049577 Bacteria 36928
133 Ga0501041_0001516 3300049577 Bacteria 12876
134 Ga0501042_0000359 3300049578 Bacteria 22911
135 Ga0501042_0021349 3300049578 Bacteria 4511
136 Ga0501043_0151067 3300049579 Bacteria 1817
137 Ga0501043_0401035 3300049579 Bacteria 1036
138 Ga0501046_0005266 3300049580 Bacteria 11570
139 Ga0501046_0006751 3300049580 Bacteria 10135
140 Ga0501046_0047483 3300049580 Bacteria 3403
141 Ga0501047_0134524 3300049581 Bacteria 2352
142 Ga0501048_0000318 3300049582 Bacteria 33016
143 Ga0501048_0011905 3300049582 Bacteria 6487
144 Ga0501069_0108268 3300049585 Bacteria 1581
145 Ga0501070_0040674 3300049586 Bacteria 3876
146 Ga0501070_0103775 3300049586 Bacteria 2351
147 Ga0501071_0000433 3300049587 Bacteria 20946
148 Ga0501071_0045211 3300049587 Bacteria 3160
149 Ga0501071_0278746 3300049587 Bacteria 1265
150 Ga0501071_0314761 3300049587 Bacteria 1188
151 Ga0501072_0002423 3300049588 Bacteria 13959
152 Ga0501072_0061491 3300049588 Bacteria 2962
153 Ga0501074_0018090 3300049590 Bacteria 5119
154 Ga0501074_0035580 3300049590 Bacteria 3608
155 Ga0501075_0001261 3300049591 Bacteria 16377
156 Ga0501075_0007012 3300049591 Bacteria 7785
157 Ga0501076_0000507 3300049592 Bacteria 24700
158 Ga0501076_0008657 3300049592 Bacteria 7470
159 Ga0501077_0000333 3300049593 Bacteria 27847
160 Ga0501077_0047867 3300049593 Bacteria 2716
161 Ga0501079_0001003 3300049741 Bacteria 19525
162 Ga0501079_0012415 3300049741 Bacteria 6500
163 Ga0501080_0026927 3300049742 Bacteria 5346
164 Ga0501081_0026912 3300049743 Bacteria 3880
165 Ga0501081_0270352 3300049743 Bacteria 1243
166 Ga0501083_0023096 3300049744 Bacteria 4316
167 Ga0501083_0238450 3300049744 Bacteria 1184
168 Ga0501035_0004256 3300049822 Bacteria 13583
169 Ga0501035_0015139 3300049822 Bacteria 7119
170 Ga0501045_0000210 3300049824 Bacteria 33638
171 Ga0501045_0000541 3300049824 Bacteria 23654
172 Ga0501045_0334527 3300049824 Bacteria 1127
173 nmdc:mga00v17_285896_c1 3300050491 Bacteria 1071
174 nmdc:mga0yw44_101902_c1 3300050492 Bacteria 1829
175 nmdc:mga0yw44_130075_c1 3300050492 Bacteria 1629
176 nmdc:mga0yw44_48713_c1 3300050492 Bacteria 2555
177 nmdc:mga0yw44_5973_c1 3300050492 Bacteria 5828
178 nmdc:mga0yw44_64296_c1 3300050492 Bacteria 2258
179 nmdc:mga0yw44_70463_c1 3300050492 Bacteria 2168
180 nmdc:mga06z11_25477_c1 3300050494 Bacteria 2804
181 nmdc:mga04h51_2567_c1 3300050495 Bacteria 4322
182 nmdc:mga07m45_21460_c1 3300050496 Bacteria 3517
183 nmdc:mga08y16_881_c1 3300050511 Bacteria 28964
184 Ga0500556_0001398 3300053104 Bacteria 10515
185 Ga0500573_0037832 3300053140 Bacteria 2789
186 Ga0500616_0000612 3300053153 Bacteria 43296
187 Ga0501084_0001100 3300054114 Bacteria 21064
188 Ga0501084_0007908 3300054114 Bacteria 8752
189 Ga0590071_007932 3300059421 Bacteria 2509
190 Ga0501082_0012539 3300060353 Bacteria 7282
191 Ga0501082_0025973 3300060353 Bacteria 5047
192 Ga0466962_0013693 3300061719 Bacteria 3904
193 Ga0530510_0001213 3300061734 Bacteria 17210
194 2643852586 2643221567 Bacteria 4163945
195 2644092377 2643221615 Bacteria 5487866
196 2644137107 2643221624 Bacteria 4384879
197 2644322180 2643221657 Bacteria 5490246
198 2738870478 2738541305 Bacteria 4910150
199 2812331612 2811994874 Bacteria 5367947
200 2816422312 2816332119 Bacteria 8120218
201 2857486108 2857481737 Bacteria 4761446
202 2861526197 2861520306 Bacteria 8348283
203 8057571170 8057568493 Bacteria 7221719
204 Ga0075368_10002567
205 JGI24735J21928_10043069
206 Ga0070682_100148706
207 Ga0070687_100073536
208 Ga0070668_100110678
209 Ga0070675_100132478
210 Ga0070671_100225495
211 Ga0070673_100057822
212 Ga0070667_100008167
213 Ga0070700_100024814
214 Ga0070678_100233972
215 Ga0068867_100009052
216 Ga0068867_100019159
217 Ga0068853_100144519
218 Ga0070672_100060156
219 Ga0070686_100054945
220 Ga0070686_100338981
221 Ga0070664_100597843
222 Ga0068854_100085433
223 Ga0068866_10005985
224 Ga0068861_100008383
225 Ga0068870_10040357
226 Ga0081539_10025474
227 Ga0081539_10026265
228 Ga0075365_10207226
229 Ga0075365_10251172
230 Ga0075368_10037063
231 Ga0075363_100001711
232 Ga0075363_100002210
233 Ga0075363_100025042
234 Ga0075367_10006075
235 Ga0075367_10010918
236 Ga0075370_10016059
237 Ga0075370_10019107
238 Ga0068865_100009097
239 Ga0068865_100038865
240 Ga0105245_10025411
241 Ga0105243_10008891
242 Ga0105243_10011259
243 Ga0105243_10524887
244 Ga0105248_10039504
245 Ga0105249_10057207
246 Ga0157370_10389726
247 Ga0157372_10061547
248 Ga0157372_10297662
249 Ga0157375_10232373
250 Ga0163163_10013891
251 Ga0163163_10203657
252 Ga0157380_10004679
253 Ga0157380_10012463
254 Ga0157377_10071803
255 Ga0206353_12033860
256 Ga0213875_10022928
257 Ga0207662_10014239
258 Ga0207706_10035171
259 Ga0207709_10035556
260 Ga0207703_10532338
261 Ga0207648_10004773
262 Ga0207676_10217353
263 Ga0209813_10010058
264 Ga0207428_10000045
265 Ga0265340_10001669
266 Ga0307405_10041023
267 Ga0307410_10017864
268 Ga0307407_10095206
269 Ga0307412_10261672
270 Ga0307412_10309954
271 Ga0307409_100000415
272 Ga0307409_100256376
273 Ga0307416_100012664
274 Ga0395900_0416323
275 Ga0436364_0150921
276 Ga0436364_0224903
277 Ga0436364_0350303
278 Ga0436364_0629792
279 Ga0395901_0021805
280 Ga0400483_190423
281 Ga0436365_1435938
282 Ga0436365_1874718
283 Ga0436361_0992303
284 Ga0436363_0807126
285 Ga0436363_1522253
286 Ga0466966_0126810
287 Ga0466966_0181699
288 Ga0466961_0030079
289 Ga0466963_0034107
290 Ga0466963_0063945
291 Ga0466963_0151664
292 Ga0466964_0008632
293 Ga0466964_0043098
294 Ga0466971_0011640
295 Ga0466970_0089552
296 Ga0466970_0155013
297 Ga0466957_0020310
298 Ga0466957_0053130
299 Ga0466957_0072407
300 Ga0466960_0000569
301 Ga0451576_0775094
302 Ga0466958_0111665
303 Ga0466967_0097338
304 Ga0466967_0497149
305 Ga0466967_0671735
306 Ga0496100_0372057
307 Ga0496101_0002474
308 Ga0496102_0022311
309 Ga0496102_0036862
310 Ga0496103_0116782
311 Ga0496103_0229428
312 Ga0496104_0007142
313 Ga0496105_0320577
314 Ga0496106_0137077
315 Ga0496109_0109449
316 Ga0496110_0204562
317 Ga0496111_0024566
318 Ga0496114_0007960
319 Ga0496114_0032923
320 Ga0501031_0008781
321 Ga0501031_0020200
322 Ga0501032_0023273
323 Ga0501032_0033085
324 Ga0501033_0034414
325 Ga0501033_0175361
326 Ga0501034_0042440
327 Ga0501036_0005303
328 Ga0501036_0020009
329 Ga0501037_0112801
330 Ga0501038_0038688
331 Ga0501039_0001296
332 Ga0501039_0031905
333 Ga0501040_0000447
334 Ga0501040_0029217
335 Ga0501041_0000086
336 Ga0501041_0001516
337 Ga0501042_0000359
338 Ga0501042_0021349
339 Ga0501043_0151067
340 Ga0501043_0401035
341 Ga0501046_0005266
342 Ga0501046_0006751
343 Ga0501046_0047483
344 Ga0501047_0134524
345 Ga0501048_0000318
346 Ga0501048_0011905
347 Ga0501069_0108268
348 Ga0501070_0040674
349 Ga0501070_0103775
350 Ga0501071_0000433
351 Ga0501071_0045211
352 Ga0501071_0278746
353 Ga0501071_0314761
354 Ga0501072_0002423
355 Ga0501072_0061491
356 Ga0501074_0018090
357 Ga0501074_0035580
358 Ga0501075_0001261
359 Ga0501075_0007012
360 Ga0501076_0000507
361 Ga0501076_0008657
362 Ga0501077_0000333
363 Ga0501077_0047867
364 Ga0501079_0001003
365 Ga0501079_0012415
366 Ga0501080_0026927
367 Ga0501081_0026912
368 Ga0501081_0270352
369 Ga0501083_0023096
370 Ga0501083_0238450
371 Ga0501035_0004256
372 Ga0501035_0015139
373 Ga0501045_0000210
374 Ga0501045_0000541
375 Ga0501045_0334527
376 nmdc:mga00v17_285896_c1
377 nmdc:mga0yw44_101902_c1
378 nmdc:mga0yw44_130075_c1
379 nmdc:mga0yw44_48713_c1
380 nmdc:mga0yw44_5973_c1
381 nmdc:mga0yw44_64296_c1
382 nmdc:mga0yw44_70463_c1
383 nmdc:mga06z11_25477_c1
384 nmdc:mga04h51_2567_c1
385 nmdc:mga07m45_21460_c1
386 nmdc:mga08y16_881_c1
387 Ga0500556_0001398
388 Ga0500573_0037832
389 Ga0500616_0000612
390 Ga0501084_0001100
391 Ga0501084_0007908
392 Ga0590071_007932
393 Ga0501082_0012539
394 Ga0501082_0025973
395 Ga0466962_0013693
396 Ga0530510_0001213
397 2643852586
398 2644092377
399 2644137107
400 2644322180
401 2738870478
402 2812331612
403 2816422312
404 2857486108
405 2861526197
406 8057571170

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04227

Indigoidine_A

Indigoidine synthase A like protein

7

296

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
4gim-assembly1.cif.gz_C crystal structure of pseudouridine monophosphate glycosidase complexed with pseudouridine 5'-phosphate 0.9777 5 305
4gil-assembly1.cif.gz_B crystal structure of pseudouridine monophosphate glycosidase/linear pseudouridine 5'-phosphate adduct 0.9771 3 305
4gij-assembly1.cif.gz_B crystal structure of pseudouridine monophosphate glycosidase complexed with sulfate 0.975 3 306
4gij-assembly1.cif.gz_A crystal structure of pseudouridine monophosphate glycosidase complexed with sulfate 0.9746 5 306
4gik-assembly1.cif.gz_C crystal structure of pseudouridine monophosphate glycosidase/linear r5p adduct 0.9733 3 306
ID Description Score Start End Superfamily
af_Q9USY1_38_343_3.40.1790.10 Alpha Beta;3-Layer(aba) Sandwich;Indigoidine synthase fold;Indigoidine synthase domain 0.9818 5 306 3.40.1790.10
4gimA00 Alpha Beta;3-Layer(aba) Sandwich;Indigoidine synthase fold;Indigoidine synthase domain 0.9779 5 306 3.40.1790.10
af_A0A1D6HG93_1_304_3.40.1790.10 Alpha Beta;3-Layer(aba) Sandwich;Indigoidine synthase fold;Indigoidine synthase domain 0.9676 8 308 3.40.1790.10
af_Q9USY1_38_343_3.40.1790.10 Alpha Beta;3-Layer(aba) Sandwich;Indigoidine synthase fold;Indigoidine synthase domain 0.966 5 306 3.40.1790.10
af_A0A1D8PKZ6_2_302_3.40.1790.10 Alpha Beta;3-Layer(aba) Sandwich;Indigoidine synthase fold;Indigoidine synthase domain 0.9643 5 305 3.40.1790.10
ID Description Score Start End GO Terms
AF-A0A7Z9Y1Z5-F1-model_v4 Pseudouridine-5-phosphate glycosidase 1.004 8 82 GO:0004730
GO:0005737
GO:0016798
GO:0046872
AF-A0A2P6G114-F1-model_v4 Pseudouridine-5-phosphate glycosidase 0.9976 10 116 GO:0004730
GO:0005737
GO:0016798
GO:0046872
AF-A0A7C7QVY9-F1-model_v4 Pseudouridine-5'-phosphate glycosidase 0.9973 105 302 GO:0004730
GO:0005737
GO:0016798
GO:0046872
AF-A0A7S2ES80-F1-model_v4 Uncharacterized protein 0.9972 141 232 GO:0004730
GO:0005737
GO:0016798
GO:0046872
AF-A0A7R8X348-F1-model_v4 Uncharacterized protein 0.9967 9 165 GO:0004730
GO:0005737
GO:0016798

Map