F310583

General Info

Members Datasets Scaffolds Average Seq Length
202 151 404 298

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2954002825|2954004463
Length 354
Sequence GKGGSHVPAVEPDGGKSALTDGTRARIVEKSSGRLGGTDVANGGPVEHGYPHLETVRAAINALYKRLSYDTVQTFSTSVAPVDVAFCDTDDLYPGVQRVAREMVRHYRLPDARMIVGFRAMTHAANVELAAGPEYFIELNDRFRTHRRDIGAALAHEVMHIYLHRLDLSFSGMRDNEILTDTAAAYLGAGWLLLDAFREDATSSQKLGYLTPEEFGYVLAKRALVFDEDPAIWFTSPQAYTAYTAGMELARRDTRQPPLTAAGWAGRRRYARDRRHAQDQHSPAAAQPDGVPYSFSPAGHEEHDGQQGHGRHGGHGPLRVSFPCPTCHQRIRVPVRGRVRARCGVCRTVLECDT

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
4 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
5 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
6 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
7 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
8 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
9 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
10 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
11 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
12 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
13 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
14 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
15 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
17 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
18 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
19 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
20 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
21 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
22 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
23 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
24 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
25 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
26 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
27 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
28 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
29 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
30 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
31 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
32 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
33 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
34 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
35 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
36 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
37 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
38 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
39 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
40 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
41 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
42 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
43 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
44 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
45 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
46 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
47 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
48 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
49 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
50 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
51 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
52 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
53 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
54 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
55 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
56 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
57 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
58 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
59 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
60 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
61 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
62 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
63 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
64 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
65 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
66 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
67 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
68 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
69 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
70 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
71 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
72 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
86 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
87 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
88 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
89 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
90 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
91 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
92 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
93 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
96 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
97 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
98 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
99 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
100 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
101 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
102 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
103 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
104 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
105 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
106 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
107 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
108 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
109 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
110 2643221578 Streptomyces sp. Root63 Isolate Unclassified
111 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
112 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
113 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
114 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
115 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
116 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
117 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
118 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
119 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
120 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
121 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
122 2862574272 Streptomyces sp. AcE210 Isolate Nodule
123 2867369537 Streptomyces sp. Z26 Isolate Unclassified
124 2867475112 Streptomyces sp. TM32 Isolate Unclassified
125 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
126 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
127 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
128 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
129 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
130 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
131 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
132 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
133 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
134 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
135 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
136 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
137 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
138 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
139 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
140 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
141 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
142 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
143 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
144 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
145 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
146 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
147 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
148 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
149 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
150 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
151 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.23
Metatranscriptomes 0
Isolates 22.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.45
Nodule 0.5
Rhizoplane 0.99
Rhizosphere 77.23
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10034749 3300003316 Bacteria 5143
2 rootH2_10046393 3300003320 Bacteria 4355
3 Ga0070698_100237669 3300005471 Bacteria 1755
4 Ga0070665_100295659 3300005548 Bacteria 1622
5 Ga0068854_100374283 3300005578 Bacteria 1172
6 Ga0075367_10078949 3300006178 Bacteria 1988
7 Ga0105251_10070595 3300009011 Bacteria 1627
8 Ga0105239_10639170 3300010375 Bacteria 1215
9 Ga0105246_10033699 3300011119 Bacteria 3406
10 Ga0182008_10001927 3300014497 Bacteria 13403
11 Ga0182005_1068499 3300015265 Bacteria 973
12 Ga0207426_1004228 3300025302 Bacteria 7135
13 Ga0207647_10027839 3300025904 Bacteria 3681
14 Ga0207640_10386408 3300025981 Bacteria 1136
15 Ga0268266_10243285 3300028379 Bacteria 1661
16 Ga0307517_10001618 3300028786 Bacteria 37446
17 Ga0307515_10245432 3300028794 Bacteria 1553
18 Ga0307511_10066296 3300030521 Bacteria 2692
19 Ga0307513_10052171 3300031456 Bacteria 4405
20 Ga0307513_10089678 3300031456 Bacteria 3138
21 Ga0307509_10072736 3300031507 Bacteria 3581
22 Ga0307508_10002378 3300031616 Bacteria 19910
23 Ga0307516_10034135 3300031730 Bacteria 5115
24 Ga0307518_10189116 3300031838 Bacteria 1382
25 Ga0395900_0122475 3300037418 Bacteria 2668
26 Ga0395898_0002744 3300037466 Bacteria 20310
27 Ga0436364_1063867 3300037853 Bacteria 6906
28 Ga0395901_0150004 3300038443 Bacteria 2450
29 Ga0439439_0035020 3300041406 Bacteria 1289
30 Ga0439449_0000442 3300042007 Bacteria 15380
31 Ga0466972_0009219 3300044658 Bacteria 4957
32 Ga0466972_0117894 3300044658 Bacteria 1252
33 Ga0466965_0090719 3300044683 Bacteria 1554
34 Ga0466966_0015929 3300044684 Bacteria 4968
35 Ga0466961_0035250 3300044693 Bacteria 3213
36 Ga0466963_0002567 3300044694 Bacteria 10186
37 Ga0466963_0187978 3300044694 Bacteria 1443
38 Ga0466971_0000643 3300044719 Bacteria 13885
39 Ga0466971_0047863 3300044719 Bacteria 1922
40 Ga0466970_0000784 3300044765 Bacteria 15349
41 Ga0466970_0012412 3300044765 Bacteria 4354
42 Ga0466957_0009412 3300044842 Bacteria 5578
43 Ga0466960_0032056 3300044901 Bacteria 2429
44 Ga0466960_0255840 3300044901 Bacteria 974
45 Ga0466959_0042144 3300045049 Bacteria 3367
46 Ga0466958_0000634 3300045836 Bacteria 15090
47 Ga0466967_0004091 3300045976 Bacteria 9742
48 Ga0495627_012946 3300046453 Bacteria 2945
49 Ga0495592_0006088 3300046454 Bacteria 8966
50 Ga0495603_0024069 3300046455 Bacteria 3683
51 Ga0495603_0038953 3300046455 Bacteria 2849
52 Ga0495603_0256441 3300046455 Bacteria 1007
53 Ga0495629_0003318 3300046459 Bacteria 12166
54 Ga0495629_0017171 3300046459 Bacteria 5192
55 Ga0495629_0035889 3300046459 Bacteria 3502
56 Ga0495629_0064888 3300046459 Bacteria 2549
57 Ga0495638_0038292 3300046460 Bacteria 3048
58 Ga0495638_0085082 3300046460 Bacteria 1913
59 Ga0495651_0028913 3300046462 Bacteria 4322
60 Ga0495662_0019862 3300046476 Bacteria 3250
61 Ga0495585_0119250 3300046492 Bacteria 1397
62 Ga0495585_0175825 3300046492 Bacteria 1103
63 Ga0495594_0019466 3300046499 Bacteria 3607
64 Ga0495594_0022021 3300046499 Bacteria 3407
65 Ga0495594_0091575 3300046499 Bacteria 1704
66 Ga0495628_0061242 3300046516 Bacteria 2951
67 Ga0495643_0004351 3300046522 Bacteria 9930
68 Ga0495666_0047723 3300046526 Bacteria 2063
69 Ga0495652_0028135 3300046529 Bacteria 4950
70 Ga0495640_0012894 3300046533 Bacteria 6373
71 Ga0495640_0112652 3300046533 Bacteria 1776
72 Ga0495667_0057040 3300046559 Bacteria 2568
73 Ga0495611_0028620 3300046648 Bacteria 2441
74 Ga0495625_0156682 3300046660 Bacteria 1528
75 Ga0495588_0043711 3300046674 Bacteria 2293
76 Ga0495657_0003941 3300046675 Bacteria 11917
77 Ga0495613_0002424 3300046689 Bacteria 14077
78 Ga0495613_0015578 3300046689 Bacteria 5655
79 Ga0495613_0064162 3300046689 Bacteria 2687
80 Ga0495624_0043152 3300046690 Bacteria 2877
81 Ga0495624_0069741 3300046690 Bacteria 2189
82 Ga0495670_0003258 3300046691 Bacteria 8001
83 Ga0495589_0005525 3300046794 Bacteria 6668
84 Ga0495604_0040090 3300047317 Bacteria 3678
85 Ga0495676_0003704 3300047321 Bacteria 13879
86 Ga0495676_0003941 3300047321 Bacteria 13510
87 Ga0495675_0075605 3300047444 Bacteria 2123
88 Ga0495685_000693 3300047447 Bacteria 10292
89 Ga0495685_004453 3300047447 Bacteria 4526
90 Ga0495686_0046504 3300047472 Bacteria 2743
91 Ga0495614_0000701 3300048089 Bacteria 14103
92 Ga0496108_0081465 3300048911 Bacteria 2743
93 Ga0501031_0068422 3300049568 Bacteria 2313
94 Ga0501031_0298789 3300049568 Bacteria 1043
95 Ga0501032_0027674 3300049569 Bacteria 3896
96 Ga0501032_0272966 3300049569 Bacteria 1095
97 Ga0501032_0316015 3300049569 Bacteria 1008
98 Ga0501033_0008638 3300049570 Bacteria 7883
99 Ga0501033_0038062 3300049570 Bacteria 3598
100 Ga0501033_0199494 3300049570 Bacteria 1429
101 Ga0501034_0003660 3300049571 Bacteria 17383
102 Ga0501034_0013812 3300049571 Bacteria 8311
103 Ga0501034_0089433 3300049571 Bacteria 3077
104 Ga0501034_0113401 3300049571 Bacteria 2700
105 Ga0501034_0358997 3300049571 Bacteria 1384
106 Ga0501036_0013653 3300049572 Bacteria 6753
107 Ga0501036_0018565 3300049572 Bacteria 5830
108 Ga0501036_0018706 3300049572 Bacteria 5808
109 Ga0501036_0110133 3300049572 Bacteria 2327
110 Ga0501037_0031491 3300049573 Bacteria 3915
111 Ga0501038_0006474 3300049574 Bacteria 10839
112 Ga0501038_0024957 3300049574 Bacteria 5330
113 Ga0501039_0012219 3300049575 Bacteria 6545
114 Ga0501039_0066617 3300049575 Bacteria 2795
115 Ga0501039_0134149 3300049575 Bacteria 1944
116 Ga0501041_0017886 3300049577 Bacteria 4218
117 Ga0501043_0001600 3300049579 Bacteria 19694
118 Ga0501043_0035976 3300049579 Bacteria 3894
119 Ga0501043_0044205 3300049579 Bacteria 3502
120 Ga0501046_0264803 3300049580 Bacteria 1262
121 Ga0501046_0388877 3300049580 Bacteria 1008
122 Ga0501047_0015220 3300049581 Bacteria 7326
123 Ga0501047_0095844 3300049581 Bacteria 2846
124 Ga0501048_0030283 3300049582 Bacteria 3915
125 Ga0501048_0048866 3300049582 Bacteria 3016
126 Ga0501068_0045220 3300049584 Bacteria 2652
127 Ga0501069_0038844 3300049585 Bacteria 2628
128 Ga0501070_0004308 3300049586 Bacteria 12230
129 Ga0501070_0185945 3300049586 Bacteria 1709
130 Ga0501070_0483306 3300049586 Bacteria 996
131 Ga0501072_0082818 3300049588 Bacteria 2543
132 Ga0501073_0247544 3300049589 Bacteria 1230
133 Ga0501074_0008243 3300049590 Bacteria 7556
134 Ga0501079_0031025 3300049741 Bacteria 4107
135 Ga0501080_0182648 3300049742 Bacteria 1929
136 Ga0501035_0001108 3300049822 Bacteria 28235
137 Ga0501035_0007510 3300049822 Bacteria 10184
138 Ga0501035_0034416 3300049822 Bacteria 4603
139 Ga0501035_0275026 3300049822 Bacteria 1424
140 Ga0501035_0421994 3300049822 Bacteria 1107
141 Ga0501044_0002306 3300049823 Bacteria 21740
142 Ga0501044_0054302 3300049823 Bacteria 4119
143 Ga0501044_0055572 3300049823 Bacteria 4066
144 Ga0501044_0067234 3300049823 Bacteria 3651
145 Ga0501044_0274351 3300049823 Bacteria 1621
146 Ga0495655_0078877 3300053083 Bacteria 937
147 Ga0500578_0011904 3300053086 Bacteria 5618
148 Ga0500566_0028524 3300053094 Bacteria 3262
149 Ga0500654_043151 3300053099 Bacteria 2530
150 Ga0500560_000673 3300053107 Bacteria 5063
151 Ga0500628_007442 3300053129 Bacteria 1877
152 Ga0500652_039152 3300053131 Bacteria 1899
153 Ga0500573_0023404 3300053140 Bacteria 3548
154 Ga0500633_0009337 3300053160 Bacteria 2574
155 Ga0500634_0025884 3300053161 Bacteria 3193
156 Ga0466962_0101224 3300061719 Bacteria 1383
157 2954004463 2954002825 Bacteria 9173742
158 2554259067 2554235005 Bacteria 6457341
159 2585302403 2582581312 Bacteria 7308206
160 2616899319 2616644941 Bacteria 8510691
161 2643897262 2643221578 Bacteria 9213798
162 2644408407 2643221673 Bacteria 9196637
163 2644435673 2643221678 Bacteria 9540101
164 2644463377 2643221682 Bacteria 6743283
165 2784587280 2784132148 Bacteria 8627943
166 2785345056 2784746763 Bacteria 9783172
167 2793980904 2791355406 Bacteria 11364898
168 2811847492 2808606982 Bacteria 7791042
169 2812481809 2811994917 Bacteria 7761064
170 2852638323 2852635781 Bacteria 8251373
171 2862183067 2862178590 Bacteria 8583590
172 2862296294 2862290372 Bacteria 7471434
173 2862583080 2862574272 Bacteria 10567477
174 2867370524 2867369537 Bacteria 6501581
175 2867481262 2867475112 Bacteria 6909112
176 2873157121 2873151551 Bacteria 8625867
177 2875393207 2875391855 Bacteria 7600475
178 2912725582 2912723979 Bacteria 8557534
179 2912759407 2912757875 Bacteria 7940295
180 2946051487 2946045630 Bacteria 8527308
181 2946066213 2946064051 Bacteria 8957905
182 2947231160 2947224130 Bacteria 9938529
183 2990064346 2990059506 Bacteria 9321252
184 2997458649 2997451912 Bacteria 8492419
185 2997606689 2997600082 Bacteria 9896405
186 3006322352 3006321560 Bacteria 8247479
187 3006396034 3006393351 Bacteria 6615579
188 3006426714 3006425503 Bacteria 6491253
189 3006495448 3006493962 Bacteria 8825450
190 8008580180 8008574985 Bacteria 7815457
191 8023627602 8023623736 Bacteria 8593882
192 8025479884 8025478263 Bacteria 8209203
193 8025535481 8025530807 Bacteria 8495698
194 8033689085 8033684223 Bacteria 6906479
195 8047899715 8047893842 Bacteria 11723082
196 8048359216 8048356638 Bacteria 11044339
197 8048376663 8048369669 Bacteria 11666822
198 8048385716 8048379754 Bacteria 11877923
199 8048410015 8048406513 Bacteria 8936924
200 8054163564 8054160619 Bacteria 7783213
201 8056450092 8056447290 Bacteria 7680491
202 8056831124 8056829672 Bacteria 9045328
203 rootH1_10034749
204 rootH2_10046393
205 Ga0070698_100237669
206 Ga0070665_100295659
207 Ga0068854_100374283
208 Ga0075367_10078949
209 Ga0105251_10070595
210 Ga0105239_10639170
211 Ga0105246_10033699
212 Ga0182008_10001927
213 Ga0182005_1068499
214 Ga0207426_1004228
215 Ga0207647_10027839
216 Ga0207640_10386408
217 Ga0268266_10243285
218 Ga0307517_10001618
219 Ga0307515_10245432
220 Ga0307511_10066296
221 Ga0307513_10052171
222 Ga0307513_10089678
223 Ga0307509_10072736
224 Ga0307508_10002378
225 Ga0307516_10034135
226 Ga0307518_10189116
227 Ga0395900_0122475
228 Ga0395898_0002744
229 Ga0436364_1063867
230 Ga0395901_0150004
231 Ga0439439_0035020
232 Ga0439449_0000442
233 Ga0466972_0009219
234 Ga0466972_0117894
235 Ga0466965_0090719
236 Ga0466966_0015929
237 Ga0466961_0035250
238 Ga0466963_0002567
239 Ga0466963_0187978
240 Ga0466971_0000643
241 Ga0466971_0047863
242 Ga0466970_0000784
243 Ga0466970_0012412
244 Ga0466957_0009412
245 Ga0466960_0032056
246 Ga0466960_0255840
247 Ga0466959_0042144
248 Ga0466958_0000634
249 Ga0466967_0004091
250 Ga0495627_012946
251 Ga0495592_0006088
252 Ga0495603_0024069
253 Ga0495603_0038953
254 Ga0495603_0256441
255 Ga0495629_0003318
256 Ga0495629_0017171
257 Ga0495629_0035889
258 Ga0495629_0064888
259 Ga0495638_0038292
260 Ga0495638_0085082
261 Ga0495651_0028913
262 Ga0495662_0019862
263 Ga0495585_0119250
264 Ga0495585_0175825
265 Ga0495594_0019466
266 Ga0495594_0022021
267 Ga0495594_0091575
268 Ga0495628_0061242
269 Ga0495643_0004351
270 Ga0495666_0047723
271 Ga0495652_0028135
272 Ga0495640_0012894
273 Ga0495640_0112652
274 Ga0495667_0057040
275 Ga0495611_0028620
276 Ga0495625_0156682
277 Ga0495588_0043711
278 Ga0495657_0003941
279 Ga0495613_0002424
280 Ga0495613_0015578
281 Ga0495613_0064162
282 Ga0495624_0043152
283 Ga0495624_0069741
284 Ga0495670_0003258
285 Ga0495589_0005525
286 Ga0495604_0040090
287 Ga0495676_0003704
288 Ga0495676_0003941
289 Ga0495675_0075605
290 Ga0495685_000693
291 Ga0495685_004453
292 Ga0495686_0046504
293 Ga0495614_0000701
294 Ga0496108_0081465
295 Ga0501031_0068422
296 Ga0501031_0298789
297 Ga0501032_0027674
298 Ga0501032_0272966
299 Ga0501032_0316015
300 Ga0501033_0008638
301 Ga0501033_0038062
302 Ga0501033_0199494
303 Ga0501034_0003660
304 Ga0501034_0013812
305 Ga0501034_0089433
306 Ga0501034_0113401
307 Ga0501034_0358997
308 Ga0501036_0013653
309 Ga0501036_0018565
310 Ga0501036_0018706
311 Ga0501036_0110133
312 Ga0501037_0031491
313 Ga0501038_0006474
314 Ga0501038_0024957
315 Ga0501039_0012219
316 Ga0501039_0066617
317 Ga0501039_0134149
318 Ga0501041_0017886
319 Ga0501043_0001600
320 Ga0501043_0035976
321 Ga0501043_0044205
322 Ga0501046_0264803
323 Ga0501046_0388877
324 Ga0501047_0015220
325 Ga0501047_0095844
326 Ga0501048_0030283
327 Ga0501048_0048866
328 Ga0501068_0045220
329 Ga0501069_0038844
330 Ga0501070_0004308
331 Ga0501070_0185945
332 Ga0501070_0483306
333 Ga0501072_0082818
334 Ga0501073_0247544
335 Ga0501074_0008243
336 Ga0501079_0031025
337 Ga0501080_0182648
338 Ga0501035_0001108
339 Ga0501035_0007510
340 Ga0501035_0034416
341 Ga0501035_0275026
342 Ga0501035_0421994
343 Ga0501044_0002306
344 Ga0501044_0054302
345 Ga0501044_0055572
346 Ga0501044_0067234
347 Ga0501044_0274351
348 Ga0495655_0078877
349 Ga0500578_0011904
350 Ga0500566_0028524
351 Ga0500654_043151
352 Ga0500560_000673
353 Ga0500628_007442
354 Ga0500652_039152
355 Ga0500573_0023404
356 Ga0500633_0009337
357 Ga0500634_0025884
358 Ga0466962_0101224
359 2954004463
360 2554259067
361 2585302403
362 2616899319
363 2643897262
364 2644408407
365 2644435673
366 2644463377
367 2784587280
368 2785345056
369 2793980904
370 2811847492
371 2812481809
372 2852638323
373 2862183067
374 2862296294
375 2862583080
376 2867370524
377 2867481262
378 2873157121
379 2875393207
380 2912725582
381 2912759407
382 2946051487
383 2946066213
384 2947231160
385 2990064346
386 2997458649
387 2997606689
388 3006322352
389 3006396034
390 3006426714
391 3006495448
392 8008580180
393 8023627602
394 8025479884
395 8025535481
396 8033689085
397 8047899715
398 8048359216
399 8048376663
400 8048385716
401 8048410015
402 8054163564
403 8056450092
404 8056831124

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
6th6-assembly1.cif.gz_Ax cryo-em structure of t. kodakarensis 70s ribosome 0.6983 253 283
4qhi-assembly2.cif.gz_C crystal structure of methanocaldococcus jannaschii selecase mutant r36w 0.6818 57 140
4qhj-assembly1.cif.gz_B crystal structure of methanocaldococcus jannaschii selecase mutant i100f+h107f 0.679 61 123
4jix-assembly1.cif.gz_B crystal structure of the metallopeptidase zymogen of methanocaldococcus jannaschii jannalysin 0.6727 57 140
6mdx-assembly1.cif.gz_A mechanism of protease dependent dpc repair 0.6373 37 128
ID Description Score Start End Superfamily
af_Q9W554_824_931_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.7282 58 124 3.30.2010.10
4qhiC00 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.6818 57 140 3.30.2010.10
4jixB00 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.6727 57 140 3.30.2010.10
af_Q23462_296_415_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.6498 57 149 3.30.2010.10
af_A0A1D6FHQ3_2_88_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.6401 55 126 3.30.2010.10
ID Description Score Start End GO Terms
AF-A0A0X3X3T0-F1-model_v4 DUF4157 domain-containing protein 0.9834 1 208
AF-A0A542KFA5-F1-model_v4 SprT-like family protein 0.9759 1 288
AF-A0A0M5ISA8-F1-model_v4 SprT-like domain-containing protein 0.9743 4 288
AF-A0A0X3X3T0-F1-model_v4 DUF4157 domain-containing protein 0.9741 1 208
AF-V6U8U7-F1-model_v4 deleted 0.9727 4 288

Map