F310581

General Info

Members Datasets Scaffolds Average Seq Length
202 167 404 509

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2939679117|2939683054
Length 538
Sequence TIAIVLRIGAFLSFAEPHYISYKGDYMGAATPVVELKQITKRFPGIVANDAISLQLQKGEIHALLGENGAGKSTLMNIVFGLYQPDEGSIEVNGKPVIIDSPNRAIDLGIGMVHQHFKLVQPFTVTENIILGSEPTKGLNINYKKAAAEVQRLSEQYGLKVNPHAKIHDISVGMQQRVEIVKTLYRGADILIFDEPTAVLTPQEIKELMVIMKKLVAEGKSIILITHKLKEIMEISDTVTIIRRGKVIDSVKTSETNPNELAEKMVGRNVTFKVDKKPATPGANVLEVSKLTAKNKEGIAVLNDLNLNVRAGEIVGIAGVDGNGQSELIEALTGLRKVDSGSIRLEGKELSNHSPRHISEAGVAHIPEDRHKHGLVLDFSVSENIVLESYYKKPYTRKGFLNFEAIKKQAKRLVEAFDVRTPSIETKARSLSGGNQQKAIIAREVDKNPELLIAAQPTRGLDVGAIEFVQKQLIAQRDQGKAVLLISFELDEIMNVSDRIAVIYEGQIVGEVLPEETNDRELGLMMAGSTQKRGTAHE

Samples

Sample ID Description Type Environment
1 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
2 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
3 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
24 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
25 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
26 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
27 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
28 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
29 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
34 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
39 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
52 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
53 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
54 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
55 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
56 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
57 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
58 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
59 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
60 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
61 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
62 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
63 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
64 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
65 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
66 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
67 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
68 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
69 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
70 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
71 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
72 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
73 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
74 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
75 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
76 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
77 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
78 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
79 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
80 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
81 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
82 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
83 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
84 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
85 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
86 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
87 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
88 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
89 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
90 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
91 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
92 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
93 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
94 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
95 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
96 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
100 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
103 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
104 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
105 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
106 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
107 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
108 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
109 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
110 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
111 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
112 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
113 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
114 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
115 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
116 2671180694 Paenibacillus sp. A3 Isolate Unclassified
117 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
118 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
119 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
120 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
121 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
122 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
123 2818991459 Paenibacillus sp. 597 Isolate Unclassified
124 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
125 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
126 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
127 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
128 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
129 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
130 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
131 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
132 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
133 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
134 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
135 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
136 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
137 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
138 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
139 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
140 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
141 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
142 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
143 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
144 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
145 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
146 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
147 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
148 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
149 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
150 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
151 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
152 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
153 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
154 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
155 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
156 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
157 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
158 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
159 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
160 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
161 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
162 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
163 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
164 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
165 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
166 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
167 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 67.82
Metatranscriptomes 0
Isolates 32.18

Biome Distribution

Category Percentage (%)
Aerial Root 0.99
Bulb 0
Endosphere 4.95
Nodule 0
Rhizoplane 9.9
Rhizosphere 62.87
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055538_1000816 3300003751 Bacteria 8423
2 Ga0055535_1002961 3300003761 Bacteria 5242
3 Ga0055541_1001689 3300003841 Bacteria 4657
4 Ga0055541_1001875 3300003841 Bacteria 4374
5 Ga0070658_10083570 3300005327 Bacteria 2625
6 Ga0070683_100000268 3300005329 Bacteria 35798
7 Ga0070683_100009477 3300005329 Bacteria 8330
8 Ga0070682_100033749 3300005337 Bacteria 3111
9 Ga0068868_100064503 3300005338 Bacteria 2908
10 Ga0070674_100072210 3300005356 Bacteria 2443
11 Ga0070714_100028972 3300005435 Bacteria 4599
12 Ga0070713_100007496 3300005436 Bacteria 7664
13 Ga0070705_100028434 3300005440 Bacteria 3062
14 Ga0070678_100002181 3300005456 Bacteria 10639
15 Ga0070678_100031406 3300005456 Bacteria 3664
16 Ga0070684_100001880 3300005535 Bacteria 15379
17 Ga0070684_100055454 3300005535 Bacteria 3455
18 Ga0068855_100024617 3300005563 Bacteria 7201
19 Ga0070664_100015475 3300005564 Bacteria 6240
20 Ga0068857_100000187 3300005577 Bacteria 39953
21 Ga0068856_100004063 3300005614 Bacteria 14643
22 Ga0070702_100005529 3300005615 Bacteria 5901
23 Ga0068860_100056183 3300005843 Bacteria 3743
24 Ga0081539_10002764 3300005985 Bacteria 23615
25 Ga0097621_100011611 3300006237 Bacteria 6494
26 Ga0075431_100136524 3300006847 Bacteria 2529
27 Ga0068865_100034333 3300006881 Bacteria 3403
28 Ga0105251_10030104 3300009011 Bacteria 2728
29 Ga0105244_10004363 3300009036 Bacteria 9752
30 Ga0105244_10015296 3300009036 Bacteria 4403
31 Ga0105247_10005276 3300009101 Bacteria 8155
32 Ga0105242_10039931 3300009176 Bacteria 3780
33 Ga0105246_10002242 3300011119 Bacteria 11664
34 Ga0157371_10123135 3300013102 Bacteria 1844
35 Ga0157370_10044925 3300013104 Bacteria 4242
36 Ga0157369_10012093 3300013105 Bacteria 9798
37 Ga0157378_10027833 3300013297 Bacteria 4985
38 Ga0157379_10014425 3300014968 Bacteria 6932
39 Ga0157376_10022008 3300014969 Bacteria 4960
40 Ga0213876_10020570 3300021384 Bacteria 3488
41 Ga0209784_100705 3300025224 Bacteria 8983
42 Ga0209784_101304 3300025224 Bacteria 3571
43 Ga0209566_100046 3300025225 Bacteria 247053
44 Ga0209566_100133 3300025225 Bacteria 91857
45 Ga0209566_100489 3300025225 Bacteria 27786
46 Ga0209437_100374 3300025233 Bacteria 45722
47 Ga0207655_1004739 3300025728 Bacteria 9506
48 Ga0207710_10003335 3300025900 Bacteria 7174
49 Ga0207680_10015353 3300025903 Bacteria 3996
50 Ga0207646_10148593 3300025922 Bacteria 2113
51 Ga0207700_10001950 3300025928 Bacteria 11736
52 Ga0207661_10001743 3300025944 Bacteria 14886
53 Ga0207661_10014590 3300025944 Bacteria 5762
54 Ga0207679_10048392 3300025945 Bacteria 3095
55 Ga0207658_10009347 3300025986 Bacteria 6649
56 Ga0207702_10004874 3300026078 Bacteria 11817
57 Ga0207674_10000100 3300026116 Bacteria 97583
58 Ga0207683_10000903 3300026121 Bacteria 27320
59 Ga0207683_10015871 3300026121 Bacteria 6413
60 Ga0268264_10072262 3300028381 Bacteria 2925
61 Ga0316576_10002212 3300031727 Bacteria 10985
62 Ga0316574_0009566 3300035398 Bacteria 5433
63 Ga0373937_0070028 3300036401 Bacteria 3235
64 Ga0395899_0089482 3300037312 Bacteria 2233
65 Ga0395900_0004700 3300037418 Bacteria 14396
66 Ga0395900_0015840 3300037418 Bacteria 7683
67 Ga0395905_0102666 3300037471 Bacteria 2684
68 Ga0395901_0034134 3300038443 Bacteria 5253
69 Ga0395901_0390481 3300038443 Bacteria 1431
70 Ga0436365_0042063 3300039437 Bacteria 5058
71 Ga0436360_0059717 3300039438 Bacteria 4460
72 Ga0436362_0732874 3300039453 Bacteria 4487
73 Ga0439433_0000837 3300041999 Bacteria 6090
74 Ga0439449_0000011 3300042007 Bacteria 57369
75 Ga0439462_0000025 3300042015 Bacteria 22569
76 Ga0451577_0001469 3300042876 Bacteria 31296
77 Ga0451577_0131343 3300042876 Bacteria 2246
78 Ga0466969_0002597 3300044656 Bacteria 9649
79 Ga0466961_0010080 3300044693 Bacteria 6021
80 Ga0466963_0045284 3300044694 Bacteria 2898
81 Ga0453684_0014369 3300044712 Bacteria 12680
82 Ga0453684_0060469 3300044712 Bacteria 4871
83 Ga0453684_0063134 3300044712 Bacteria 4740
84 Ga0453684_0086599 3300044712 Bacteria 3886
85 Ga0453684_0158754 3300044712 Bacteria 2677
86 Ga0453684_0169937 3300044712 Bacteria 2571
87 Ga0453684_0170619 3300044712 Bacteria 2564
88 Ga0466968_0012414 3300044735 Bacteria 3335
89 Ga0451576_0328636 3300045051 Bacteria 1600
90 Ga0466967_0119421 3300045976 Bacteria 2433
91 Ga0466967_0159154 3300045976 Bacteria 2118
92 Ga0495637_0042949 3300046520 Bacteria 1932
93 Ga0495624_0035834 3300046690 Bacteria 3202
94 Ga0495660_0013755 3300046810 Bacteria 4690
95 Ga0495674_0068314 3300047319 Bacteria 3076
96 Ga0496100_0032946 3300048903 Bacteria 3237
97 Ga0496101_0024654 3300048904 Bacteria 4166
98 Ga0496101_0089593 3300048904 Bacteria 2286
99 Ga0496102_0150563 3300048905 Bacteria 2186
100 Ga0496103_0032845 3300048906 Bacteria 3169
101 Ga0496103_0037500 3300048906 Bacteria 2970
102 Ga0496105_0001378 3300048908 Bacteria 17065
103 Ga0496105_0033188 3300048908 Bacteria 4238
104 Ga0496105_0093146 3300048908 Bacteria 2488
105 Ga0496106_0007242 3300048909 Bacteria 8195
106 Ga0496107_0003801 3300048910 Bacteria 10137
107 Ga0496107_0058046 3300048910 Bacteria 2798
108 Ga0496110_0003106 3300048913 Bacteria 12605
109 Ga0496110_0073603 3300048913 Bacteria 3032
110 Ga0496111_0156381 3300048914 Bacteria 1692
111 Ga0496112_0017308 3300048915 Bacteria 6770
112 Ga0496113_0011408 3300048916 Bacteria 5925
113 Ga0496114_0019055 3300048917 Bacteria 5560
114 Ga0496114_0026001 3300048917 Bacteria 4789
115 Ga0496116_0013061 3300048919 Bacteria 6731
116 Ga0496117_0081724 3300048920 Bacteria 2119
117 Ga0496119_0000350 3300048922 Bacteria 64736
118 Ga0496119_0004234 3300048922 Bacteria 14389
119 Ga0496120_0001665 3300048923 Bacteria 25613
120 Ga0496120_0016118 3300048923 Bacteria 4895
121 Ga0496122_0042486 3300048925 Bacteria 3576
122 Ga0496123_0006253 3300048926 Bacteria 11607
123 Ga0496123_0008518 3300048926 Bacteria 9404
124 Ga0496124_0000211 3300048927 Bacteria 113824
125 Ga0496124_0001304 3300048927 Bacteria 37715
126 Ga0496125_0002340 3300048928 Bacteria 24849
127 Ga0496125_0003674 3300048928 Bacteria 18333
128 Ga0496125_0003755 3300048928 Bacteria 18079
129 Ga0496126_0000937 3300048929 Bacteria 50277
130 Ga0496126_0003569 3300048929 Bacteria 19512
131 Ga0501034_0093199 3300049571 Bacteria 3008
132 Ga0501047_0020148 3300049581 Bacteria 6403
133 Ga0501069_0008002 3300049585 Bacteria 5551
134 Ga0501070_0000243 3300049586 Bacteria 51201
135 nmdc:mga05p37_166864_c1 3300050507 Bacteria 2686
136 nmdc:mga0a205_28702_c1 3300050515 Bacteria 2807
137 Ga0495612_0036287 3300053078 Bacteria 2001
138 2939683054 2939679117 Bacteria 6921672
139 2512730287 2512564039 Bacteria 8739048
140 2512736296 2512564039 Bacteria 8739048
141 2550904861 2548877040 Bacteria 7507281
142 2571527334 2571042143 Bacteria 6986194
143 2573040418 2571042588 Bacteria 5045676
144 2578335867 2576861424 Bacteria 5270569
145 2580932712 2579778775 Bacteria 5360914
146 2587744926 2585428059 Bacteria 8696589
147 2601639593 2600255286 Bacteria 5390125
148 2621274057 2619619294 Bacteria 5575484
149 2643739232 2643221543 Bacteria 6628015
150 2644422832 2643221676 Bacteria 8119172
151 2673817081 2671180694 Bacteria 7506943
152 2723602967 2721755693 Bacteria 6126117
153 2728532348 2728368933 Bacteria 7044283
154 2730138960 2728369359 Bacteria 5621728
155 2753811644 2751185905 Bacteria 6142767
156 2793182026 2791355222 Bacteria 5898266
157 2802436479 2802428803 Bacteria 5806948
158 2819674148 2818991459 Bacteria 8736032
159 2821114071 2821111986 Bacteria 6894338
160 2857457581 2857453340 Bacteria 8090534
161 2864736107 2864733723 Bacteria 6770668
162 2865008226 2865002811 Bacteria 6333767
163 2881640774 2881636855 Bacteria 5205297
164 2885530445 2885526491 Bacteria 7164189
165 2889044302 2889042446 Bacteria 7618936
166 2889278928 2889276214 Bacteria 5979355
167 2889298576 2889295896 Bacteria 4704906
168 2904165994 2904162308 Bacteria 7086713
169 2904491188 2904490793 Bacteria 7046938
170 2904599653 2904595352 Bacteria 6124848
171 2904762481 2904755435 Bacteria 7986759
172 2907204525 2907202186 Bacteria 6632024
173 2919160446 2919160200 Bacteria 6929020
174 2919431829 2919425241 Bacteria 8055701
175 2929212014 2929206907 Bacteria 5918291
176 2931387737 2931384279 Bacteria 7299545
177 2938653543 2938649242 Bacteria 7118381
178 2939704468 2939702853 Bacteria 5139229
179 2945993679 2945991243 Bacteria 7008369
180 2946056409 2946053406 Bacteria 6978655
181 2968561050 2968558590 Bacteria 6956864
182 2971408325 2971403814 Bacteria 7370929
183 2971413650 2971410472 Bacteria 8311090
184 2971514754 2971511577 Bacteria 5404012
185 2980128074 2980125574 Bacteria 5567337
186 2980180862 2980176882 Bacteria 5397533
187 2981289042 2981284811 Bacteria 4641497
188 2981293821 2981289755 Bacteria 4641509
189 2981984648 2981980479 Bacteria 4641628
190 2981989537 2981985349 Bacteria 4641497
191 2984528473 2984527788 Bacteria 5288478
192 2984534581 2984532647 Bacteria 5288506
193 2988228722 2988225383 Bacteria 7221625
194 2996636186 2996632988 Bacteria 6921523
195 2996708691 2996706504 Bacteria 5757485
196 648169292 648028048 Bacteria 5394884
197 8002322832 8002317523 Bacteria 8051857
198 8046998985 8046991243 Bacteria 8497463
199 8054466744 8054465665 Bacteria 7323556
200 8055636001 8055632911 Bacteria 5283357
201 8056537361 8056533031 Bacteria 8964429
202 8057475050 8057473075 Bacteria 5892720
203 Ga0055538_1000816
204 Ga0055535_1002961
205 Ga0055541_1001689
206 Ga0055541_1001875
207 Ga0070658_10083570
208 Ga0070683_100000268
209 Ga0070683_100009477
210 Ga0070682_100033749
211 Ga0068868_100064503
212 Ga0070674_100072210
213 Ga0070714_100028972
214 Ga0070713_100007496
215 Ga0070705_100028434
216 Ga0070678_100002181
217 Ga0070678_100031406
218 Ga0070684_100001880
219 Ga0070684_100055454
220 Ga0068855_100024617
221 Ga0070664_100015475
222 Ga0068857_100000187
223 Ga0068856_100004063
224 Ga0070702_100005529
225 Ga0068860_100056183
226 Ga0081539_10002764
227 Ga0097621_100011611
228 Ga0075431_100136524
229 Ga0068865_100034333
230 Ga0105251_10030104
231 Ga0105244_10004363
232 Ga0105244_10015296
233 Ga0105247_10005276
234 Ga0105242_10039931
235 Ga0105246_10002242
236 Ga0157371_10123135
237 Ga0157370_10044925
238 Ga0157369_10012093
239 Ga0157378_10027833
240 Ga0157379_10014425
241 Ga0157376_10022008
242 Ga0213876_10020570
243 Ga0209784_100705
244 Ga0209784_101304
245 Ga0209566_100046
246 Ga0209566_100133
247 Ga0209566_100489
248 Ga0209437_100374
249 Ga0207655_1004739
250 Ga0207710_10003335
251 Ga0207680_10015353
252 Ga0207646_10148593
253 Ga0207700_10001950
254 Ga0207661_10001743
255 Ga0207661_10014590
256 Ga0207679_10048392
257 Ga0207658_10009347
258 Ga0207702_10004874
259 Ga0207674_10000100
260 Ga0207683_10000903
261 Ga0207683_10015871
262 Ga0268264_10072262
263 Ga0316576_10002212
264 Ga0316574_0009566
265 Ga0373937_0070028
266 Ga0395899_0089482
267 Ga0395900_0004700
268 Ga0395900_0015840
269 Ga0395905_0102666
270 Ga0395901_0034134
271 Ga0395901_0390481
272 Ga0436365_0042063
273 Ga0436360_0059717
274 Ga0436362_0732874
275 Ga0439433_0000837
276 Ga0439449_0000011
277 Ga0439462_0000025
278 Ga0451577_0001469
279 Ga0451577_0131343
280 Ga0466969_0002597
281 Ga0466961_0010080
282 Ga0466963_0045284
283 Ga0453684_0014369
284 Ga0453684_0060469
285 Ga0453684_0063134
286 Ga0453684_0086599
287 Ga0453684_0158754
288 Ga0453684_0169937
289 Ga0453684_0170619
290 Ga0466968_0012414
291 Ga0451576_0328636
292 Ga0466967_0119421
293 Ga0466967_0159154
294 Ga0495637_0042949
295 Ga0495624_0035834
296 Ga0495660_0013755
297 Ga0495674_0068314
298 Ga0496100_0032946
299 Ga0496101_0024654
300 Ga0496101_0089593
301 Ga0496102_0150563
302 Ga0496103_0032845
303 Ga0496103_0037500
304 Ga0496105_0001378
305 Ga0496105_0033188
306 Ga0496105_0093146
307 Ga0496106_0007242
308 Ga0496107_0003801
309 Ga0496107_0058046
310 Ga0496110_0003106
311 Ga0496110_0073603
312 Ga0496111_0156381
313 Ga0496112_0017308
314 Ga0496113_0011408
315 Ga0496114_0019055
316 Ga0496114_0026001
317 Ga0496116_0013061
318 Ga0496117_0081724
319 Ga0496119_0000350
320 Ga0496119_0004234
321 Ga0496120_0001665
322 Ga0496120_0016118
323 Ga0496122_0042486
324 Ga0496123_0006253
325 Ga0496123_0008518
326 Ga0496124_0000211
327 Ga0496124_0001304
328 Ga0496125_0002340
329 Ga0496125_0003674
330 Ga0496125_0003755
331 Ga0496126_0000937
332 Ga0496126_0003569
333 Ga0501034_0093199
334 Ga0501047_0020148
335 Ga0501069_0008002
336 Ga0501070_0000243
337 nmdc:mga05p37_166864_c1
338 nmdc:mga0a205_28702_c1
339 Ga0495612_0036287
340 2939683054
341 2512730287
342 2512736296
343 2550904861
344 2571527334
345 2573040418
346 2578335867
347 2580932712
348 2587744926
349 2601639593
350 2621274057
351 2643739232
352 2644422832
353 2673817081
354 2723602967
355 2728532348
356 2730138960
357 2753811644
358 2793182026
359 2802436479
360 2819674148
361 2821114071
362 2857457581
363 2864736107
364 2865008226
365 2881640774
366 2885530445
367 2889044302
368 2889278928
369 2889298576
370 2904165994
371 2904491188
372 2904599653
373 2904762481
374 2907204525
375 2919160446
376 2919431829
377 2929212014
378 2931387737
379 2938653543
380 2939704468
381 2945993679
382 2946056409
383 2968561050
384 2971408325
385 2971413650
386 2971514754
387 2980128074
388 2980180862
389 2981289042
390 2981293821
391 2981984648
392 2981989537
393 2984528473
394 2984534581
395 2988228722
396 2996636186
397 2996708691
398 648169292
399 8002322832
400 8046998985
401 8054466744
402 8055636001
403 8056537361
404 8057475050

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

49

198

0.96

PF00005

ABC_tran

ABC transporter

302

459

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
6b89-assembly1.cif.gz_A e. coli lptb in complex with adp and novobiocin 0.9 257 500
6z67-assembly3.cif.gz_E ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.8946 3 224
1f3o-assembly1.cif.gz_A-2 crystal structure of mj0796 atp-binding cassette 0.8913 5 224
1gaj-assembly1.cif.gz_A crystal structure of a nucleotide-free atp-binding cassette from an abc transporter 0.8909 1 224
6b89-assembly1.cif.gz_A e. coli lptb in complex with adp and novobiocin 0.8892 257 500
ID Description Score Start End Superfamily
af_Q6BEX0_1_254_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9605 3 239 3.40.50.300
af_P37388_2_240_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9602 3 239 3.40.50.300
af_P77257_270_507_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9564 260 501 3.40.50.300
af_P0AAF3_266_503_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9555 275 500 3.40.50.300
af_P04983_256_497_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.954 257 501 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7X9PAI4-F1-model_v4 ATP-binding cassette domain-containing protein 0.9782 278 505 GO:0005524
GO:0016887
AF-A0A0F8ZJ00-F1-model_v4 ABC transporter domain-containing protein 0.9622 312 501
AF-A0A7C1BCU3-F1-model_v4 ATP-binding cassette domain-containing protein 0.9554 312 501 GO:0005524
GO:0016887
AF-A0A1R3VHH3-F1-model_v4 ATP-binding protein of sugar ABC transporter 0.9456 3 242 GO:0005524
GO:0016887
AF-A0A7X9PAI4-F1-model_v4 ATP-binding cassette domain-containing protein 0.9455 278 505 GO:0005524
GO:0016887

Map