F310142

General Info

Members Datasets Scaffolds Average Seq Length
202 104 404 413

Family's Representative Sequence

Representative Sequence 3300039093|Ga0400489_63031|Ga0400489_63031_2332_3627
Length 431
Sequence MVFLHIYGVEPINLYLLNTSEELIMHNRGYYADFGGAFLPEILTATFDQLESAFEAAKADPDFWQQYQQVMQTYSCRPTPLTFAPNLTRHFGGARIYIKREDLNHTGAHKANNVMGQGLLVQRMGKTRVIAETGAGQHGVATATMAARFGFDCTIYMGQVDVQRQRPNVFWMQRLGAAVVPVTDGTRILKDAINEAFRDWVSNMDATHYVLGTACGPHPFPEMVTYFQSIIGIEARNQILDAEDRLPKRLYACVGGGSNAMGLFSGFLDDRVELVGVEAGGKGIDTDHHASRLCATDASVGVAQGYKTYFLQDDDGQMRETHSIAAGLDYVGVSPILSQFKKEGKARFEAATDQEVIDAVSLTMRKEGLIPALESAHAFAQAFKEAPDLAPDDIIIINQSGRGDKDIFTVADAFEDPDWQQFIKDKAKTYK

Samples

Sample ID Description Type Environment
1 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
5 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
6 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
11 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
12 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
18 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
19 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
22 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
23 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
24 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
25 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
26 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
27 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
28 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
34 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
35 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
36 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
37 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
38 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
39 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
40 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
41 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
42 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
43 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
44 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
45 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
46 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
47 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
48 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
49 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
50 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
51 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
52 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
53 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
54 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
55 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
56 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
57 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
58 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
59 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
60 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
61 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
62 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
63 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
64 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
65 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
66 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
67 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
68 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
69 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
70 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
71 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
72 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
73 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
74 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
75 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
76 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
77 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
78 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
79 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
80 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
81 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
82 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
83 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
84 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
85 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
86 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
91 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
92 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
93 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
94 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
95 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
96 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
97 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
98 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
99 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
100 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
101 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
102 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
103 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
104 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.5
Metatranscriptomes 0
Isolates 0.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.99
Nodule 0
Rhizoplane 1.49
Rhizosphere 82.18
Stem 0
Stem Tuber 0
Unclassified 0.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0400489_63031 3300039093 Bacteria 16147
2 JGI25405J52794_10005004 3300003911 Bacteria 2377
3 Ga0070682_100033585 3300005337 Bacteria 3119
4 Ga0070708_100098423 3300005445 Bacteria 2675
5 Ga0070663_100006843 3300005455 Bacteria 6897
6 Ga0070663_100008961 3300005455 Bacteria 6179
7 Ga0068867_100015585 3300005459 Bacteria 5393
8 Ga0070706_100160804 3300005467 Bacteria 2097
9 Ga0070706_100240077 3300005467 Bacteria 1692
10 Ga0070672_100002454 3300005543 Bacteria 11773
11 Ga0068855_100000169 3300005563 Bacteria 83184
12 Ga0070702_100088204 3300005615 Bacteria 1875
13 Ga0068864_100058195 3300005618 Bacteria 3340
14 Ga0068861_100014051 3300005719 Bacteria 5614
15 Ga0081455_10001519 3300005937 Bacteria 28603
16 Ga0081455_10024334 3300005937 Bacteria 5609
17 Ga0081455_10074926 3300005937 Bacteria 2793
18 Ga0081538_10007004 3300005981 Bacteria 9807
19 Ga0081538_10012867 3300005981 Bacteria 6673
20 Ga0081538_10031899 3300005981 Bacteria 3543
21 Ga0081539_10014119 3300005985 Bacteria 5938
22 Ga0075430_100050794 3300006846 Bacteria 3495
23 Ga0075433_10140360 3300006852 Bacteria 2148
24 Ga0075429_100074274 3300006880 Bacteria 2962
25 Ga0075429_100148792 3300006880 Bacteria 2050
26 Ga0075429_100171814 3300006880 Bacteria 1898
27 Ga0111539_10036018 3300009094 Bacteria 5987
28 Ga0105245_10098470 3300009098 Bacteria 2702
29 Ga0105241_10011492 3300009174 Bacteria 6491
30 Ga0105249_10193621 3300009553 Bacteria 1986
31 Ga0157370_10224266 3300013104 Bacteria 1740
32 Ga0157378_10159231 3300013297 Bacteria 2110
33 Ga0163163_10019702 3300014325 Bacteria 6340
34 Ga0157380_10029780 3300014326 Bacteria 4175
35 Ga0157380_10171074 3300014326 Bacteria 1898
36 Ga0157376_10043462 3300014969 Bacteria 3688
37 Ga0207684_10039826 3300025910 Bacteria 3984
38 Ga0207667_10000726 3300025949 Bacteria 42829
39 Ga0207712_10144168 3300025961 Bacteria 1831
40 Ga0207678_10009996 3300026067 Bacteria 8325
41 Ga0207678_10016348 3300026067 Bacteria 6514
42 Ga0207675_100014636 3300026118 Bacteria 7314
43 Ga0207675_100096716 3300026118 Bacteria 2780
44 Ga0207428_10089417 3300027907 Bacteria 2393
45 Ga0265337_1017672 3300028556 Bacteria 2282
46 Ga0265337_1019412 3300028556 Bacteria 2142
47 Ga0265326_10015106 3300028558 Bacteria 2245
48 Ga0265319_1007094 3300028563 Bacteria 5086
49 Ga0265334_10018714 3300028573 Bacteria 2856
50 Ga0265318_10000152 3300028577 Bacteria 62202
51 Ga0265318_10003942 3300028577 Bacteria 7312
52 Ga0265322_10004213 3300028654 Bacteria 4306
53 Ga0265338_10014468 3300028800 Bacteria 8782
54 Ga0265338_10074232 3300028800 Bacteria 2894
55 Ga0265324_10000085 3300029957 Bacteria 73078
56 Ga0307511_10066168 3300030521 Bacteria 2695
57 Ga0265330_10000676 3300031235 Bacteria 21880
58 Ga0265330_10011391 3300031235 Bacteria 4172
59 Ga0265330_10052861 3300031235 Bacteria 1778
60 Ga0265332_10001556 3300031238 Bacteria 12615
61 Ga0265328_10000207 3300031239 Bacteria 27427
62 Ga0265328_10031967 3300031239 Bacteria 1955
63 Ga0265325_10006798 3300031241 Bacteria 6915
64 Ga0265325_10009209 3300031241 Bacteria 5780
65 Ga0265329_10000003 3300031242 Bacteria 115616
66 Ga0265329_10000819 3300031242 Bacteria 15839
67 Ga0265340_10001099 3300031247 Bacteria 15420
68 Ga0265340_10016381 3300031247 Bacteria 3839
69 Ga0265339_10000036 3300031249 Bacteria 124408
70 Ga0265339_10048324 3300031249 Bacteria 2333
71 Ga0265331_10001019 3300031250 Bacteria 21920
72 Ga0265331_10001667 3300031250 Bacteria 16106
73 Ga0265316_10005102 3300031344 Bacteria 12865
74 Ga0265316_10007777 3300031344 Bacteria 10038
75 Ga0265316_10081188 3300031344 Bacteria 2486
76 Ga0307513_10150025 3300031456 Bacteria 2242
77 Ga0307509_10232099 3300031507 Bacteria 1647
78 Ga0307508_10001364 3300031616 Bacteria 27499
79 Ga0316575_10001295 3300031665 Bacteria 7985
80 Ga0316575_10004574 3300031665 Bacteria 4870
81 Ga0316575_10013988 3300031665 Bacteria 3007
82 Ga0316575_10055775 3300031665 Bacteria 1574
83 Ga0316575_10057767 3300031665 Bacteria 1547
84 Ga0265314_10000017 3300031711 Bacteria 340498
85 Ga0265314_10002930 3300031711 Bacteria 16933
86 Ga0265314_10011612 3300031711 Bacteria 7249
87 Ga0265314_10055862 3300031711 Bacteria 2722
88 Ga0265342_10000614 3300031712 Bacteria 37513
89 Ga0265342_10001138 3300031712 Bacteria 25408
90 Ga0265342_10002573 3300031712 Bacteria 15537
91 Ga0265342_10014740 3300031712 Bacteria 5177
92 Ga0316576_10004636 3300031727 Bacteria 8275
93 Ga0316576_10021166 3300031727 Bacteria 4493
94 Ga0316576_10132732 3300031727 Bacteria 1873
95 Ga0316576_10152826 3300031727 Bacteria 1739
96 Ga0316576_10209132 3300031727 Unclassified 1469
97 Ga0316578_10000135 3300031728 Bacteria 18848
98 Ga0316578_10003888 3300031728 Bacteria 6945
99 Ga0316578_10116632 3300031728 Bacteria 1604
100 Ga0316577_10001256 3300031733 Bacteria 11832
101 Ga0316577_10001777 3300031733 Bacteria 10390
102 Ga0316577_10049510 3300031733 Bacteria 2345
103 Ga0316577_10054221 3300031733 Bacteria 2238
104 Ga0307407_10010912 3300031903 Bacteria 4303
105 Ga0316585_10000044 3300032137 Bacteria 19322
106 Ga0316580_10000529 3300032139 Bacteria 8864
107 Ga0316574_0001500 3300035398 Bacteria 11111
108 Ga0316574_0008489 3300035398 Bacteria 5708
109 Ga0316574_0016434 3300035398 Bacteria 4313
110 Ga0316574_0040387 3300035398 Bacteria 2873
111 Ga0316574_0068716 3300035398 Bacteria 2235
112 Ga0373937_0009593 3300036401 Bacteria 8427
113 Ga0316582_0000050 3300036647 Bacteria 29050
114 Ga0316582_0030367 3300036647 Unclassified 3292
115 Ga0316582_0067103 3300036647 Bacteria 2314
116 Ga0316582_0090825 3300036647 Bacteria 2010
117 Ga0316582_0099083 3300036647 Bacteria 1928
118 Ga0316582_0109483 3300036647 Bacteria 1837
119 Ga0316582_0139945 3300036647 Bacteria 1631
120 Ga0316582_0218369 3300036647 Bacteria 1303
121 Ga0316584_0001325 3300036712 Bacteria 14654
122 Ga0316584_0001341 3300036712 Bacteria 14613
123 Ga0316584_0016912 3300036712 Bacteria 5234
124 Ga0316584_0053076 3300036712 Bacteria 3033
125 Ga0316584_0095236 3300036712 Bacteria 2229
126 Ga0400484_38477 3300038725 Bacteria 4882
127 Ga0400484_41072 3300038725 Bacteria 3380
128 Ga0400490_09006 3300038726 Bacteria 131367
129 Ga0400490_17908 3300038726 Bacteria 4783
130 Ga0400491_11881 3300038727 Bacteria 14634
131 Ga0400485_14293 3300038735 Bacteria 4444
132 Ga0400488_51681 3300038741 Bacteria 7422
133 Ga0400486_07289 3300038742 Bacteria 8084
134 Ga0400486_14833 3300038742 Bacteria 17065
135 Ga0400486_15462 3300038742 Bacteria 4349
136 Ga0400486_31068 3300038742 Bacteria 3180
137 Ga0400486_32878 3300038742 Bacteria 79977
138 Ga0400483_006667 3300039062 Bacteria 8617
139 Ga0400483_008867 3300039062 Bacteria 7371
140 Ga0400483_032995 3300039062 Bacteria 6891
141 Ga0400483_038942 3300039062 Bacteria 36270
142 Ga0400483_061257 3300039062 Bacteria 1706
143 Ga0400483_177182 3300039062 Bacteria 39956
144 Ga0400483_286872 3300039062 Bacteria 13196
145 Ga0400489_00934 3300039093 Bacteria 47174
146 Ga0400489_30186 3300039093 Bacteria 6934
147 Ga0400489_72581 3300039093 Bacteria 15444
148 Ga0400487_30104 3300039110 Bacteria 13720
149 Ga0451797_0277854 3300041453 Bacteria 2026
150 Ga0451807_0187439 3300041486 Bacteria 23732
151 Ga0451807_0748263 3300041486 Bacteria 4175
152 Ga0451849_0995978 3300041505 Bacteria 5015
153 Ga0451853_1844337 3300041512 Bacteria 23540
154 Ga0451577_0000033 3300042876 Bacteria 378714
155 Ga0451577_0000160 3300042876 Bacteria 147192
156 Ga0451577_0000314 3300042876 Bacteria 92338
157 Ga0451577_0008267 3300042876 Bacteria 10135
158 Ga0451577_0029851 3300042876 Bacteria 4926
159 Ga0451577_0034109 3300042876 Bacteria 4589
160 Ga0453683_0003090 3300044673 Bacteria 12447
161 Ga0453683_0009598 3300044673 Bacteria 6454
162 Ga0453684_0000052 3300044712 Bacteria 546732
163 Ga0453684_0000096 3300044712 Bacteria 377923
164 Ga0453684_0000109 3300044712 Bacteria 361015
165 Ga0453684_0000453 3300044712 Bacteria 165759
166 Ga0453684_0006767 3300044712 Bacteria 21574
167 Ga0453684_0007314 3300044712 Bacteria 20423
168 Ga0453684_0019125 3300044712 Bacteria 10450
169 Ga0453684_0033872 3300044712 Bacteria 7107
170 Ga0453684_0046169 3300044712 Bacteria 5798
171 Ga0453684_0053573 3300044712 Bacteria 5265
172 Ga0453684_0075265 3300044712 Bacteria 4244
173 Ga0453684_0079362 3300044712 Bacteria 4103
174 Ga0453684_0080223 3300044712 Bacteria 4075
175 Ga0453684_0113205 3300044712 Bacteria 3292
176 Ga0453684_0199795 3300044712 Bacteria 2331
177 Ga0453684_0376309 3300044712 Bacteria 1595
178 Ga0466960_0005255 3300044901 Bacteria 5115
179 Ga0451576_0000523 3300045051 Bacteria 83771
180 Ga0495589_0048525 3300046794 Bacteria 2102
181 Ga0501036_0172045 3300049572 Bacteria 1825
182 Ga0501038_0026932 3300049574 Bacteria 5118
183 Ga0501039_0196952 3300049575 Bacteria 1584
184 Ga0501040_0104228 3300049576 Bacteria 1981
185 Ga0501067_0032489 3300049583 Bacteria 2897
186 Ga0501072_0218196 3300049588 Bacteria 1520
187 Ga0501073_0039379 3300049589 Bacteria 3349
188 Ga0501077_0022670 3300049593 Bacteria 3979
189 Ga0501077_0084984 3300049593 Bacteria 2006
190 Ga0501083_0002297 3300049744 Bacteria 13089
191 Ga0501044_0154574 3300049823 Bacteria 2274
192 nmdc:mga05p37_41580_c1 3300050507 Bacteria 5644
193 nmdc:mga05p37_49431_c1 3300050507 Bacteria 5172
194 nmdc:mga09592_27491_c1 3300050508 Bacteria 4720
195 nmdc:mga0qj67_46008_c1 3300050509 Bacteria 3444
196 nmdc:mga06r32_1809_c1 3300050510 Bacteria 19099
197 Ga0500658_0059277 3300053134 Bacteria 1588
198 Ga0500637_0033912 3300053178 Bacteria 2854
199 Ga0501084_0020837 3300054114 Bacteria 5468
200 Ga0501084_0088188 3300054114 Bacteria 2605
201 Ga0530510_0175117 3300061734 Bacteria 1590
202 2740994876 2740891818 Bacteria 6711283
203 Ga0400489_63031
204 JGI25405J52794_10005004
205 Ga0070682_100033585
206 Ga0070708_100098423
207 Ga0070663_100006843
208 Ga0070663_100008961
209 Ga0068867_100015585
210 Ga0070706_100160804
211 Ga0070706_100240077
212 Ga0070672_100002454
213 Ga0068855_100000169
214 Ga0070702_100088204
215 Ga0068864_100058195
216 Ga0068861_100014051
217 Ga0081455_10001519
218 Ga0081455_10024334
219 Ga0081455_10074926
220 Ga0081538_10007004
221 Ga0081538_10012867
222 Ga0081538_10031899
223 Ga0081539_10014119
224 Ga0075430_100050794
225 Ga0075433_10140360
226 Ga0075429_100074274
227 Ga0075429_100148792
228 Ga0075429_100171814
229 Ga0111539_10036018
230 Ga0105245_10098470
231 Ga0105241_10011492
232 Ga0105249_10193621
233 Ga0157370_10224266
234 Ga0157378_10159231
235 Ga0163163_10019702
236 Ga0157380_10029780
237 Ga0157380_10171074
238 Ga0157376_10043462
239 Ga0207684_10039826
240 Ga0207667_10000726
241 Ga0207712_10144168
242 Ga0207678_10009996
243 Ga0207678_10016348
244 Ga0207675_100014636
245 Ga0207675_100096716
246 Ga0207428_10089417
247 Ga0265337_1017672
248 Ga0265337_1019412
249 Ga0265326_10015106
250 Ga0265319_1007094
251 Ga0265334_10018714
252 Ga0265318_10000152
253 Ga0265318_10003942
254 Ga0265322_10004213
255 Ga0265338_10014468
256 Ga0265338_10074232
257 Ga0265324_10000085
258 Ga0307511_10066168
259 Ga0265330_10000676
260 Ga0265330_10011391
261 Ga0265330_10052861
262 Ga0265332_10001556
263 Ga0265328_10000207
264 Ga0265328_10031967
265 Ga0265325_10006798
266 Ga0265325_10009209
267 Ga0265329_10000003
268 Ga0265329_10000819
269 Ga0265340_10001099
270 Ga0265340_10016381
271 Ga0265339_10000036
272 Ga0265339_10048324
273 Ga0265331_10001019
274 Ga0265331_10001667
275 Ga0265316_10005102
276 Ga0265316_10007777
277 Ga0265316_10081188
278 Ga0307513_10150025
279 Ga0307509_10232099
280 Ga0307508_10001364
281 Ga0316575_10001295
282 Ga0316575_10004574
283 Ga0316575_10013988
284 Ga0316575_10055775
285 Ga0316575_10057767
286 Ga0265314_10000017
287 Ga0265314_10002930
288 Ga0265314_10011612
289 Ga0265314_10055862
290 Ga0265342_10000614
291 Ga0265342_10001138
292 Ga0265342_10002573
293 Ga0265342_10014740
294 Ga0316576_10004636
295 Ga0316576_10021166
296 Ga0316576_10132732
297 Ga0316576_10152826
298 Ga0316576_10209132
299 Ga0316578_10000135
300 Ga0316578_10003888
301 Ga0316578_10116632
302 Ga0316577_10001256
303 Ga0316577_10001777
304 Ga0316577_10049510
305 Ga0316577_10054221
306 Ga0307407_10010912
307 Ga0316585_10000044
308 Ga0316580_10000529
309 Ga0316574_0001500
310 Ga0316574_0008489
311 Ga0316574_0016434
312 Ga0316574_0040387
313 Ga0316574_0068716
314 Ga0373937_0009593
315 Ga0316582_0000050
316 Ga0316582_0030367
317 Ga0316582_0067103
318 Ga0316582_0090825
319 Ga0316582_0099083
320 Ga0316582_0109483
321 Ga0316582_0139945
322 Ga0316582_0218369
323 Ga0316584_0001325
324 Ga0316584_0001341
325 Ga0316584_0016912
326 Ga0316584_0053076
327 Ga0316584_0095236
328 Ga0400484_38477
329 Ga0400484_41072
330 Ga0400490_09006
331 Ga0400490_17908
332 Ga0400491_11881
333 Ga0400485_14293
334 Ga0400488_51681
335 Ga0400486_07289
336 Ga0400486_14833
337 Ga0400486_15462
338 Ga0400486_31068
339 Ga0400486_32878
340 Ga0400483_006667
341 Ga0400483_008867
342 Ga0400483_032995
343 Ga0400483_038942
344 Ga0400483_061257
345 Ga0400483_177182
346 Ga0400483_286872
347 Ga0400489_00934
348 Ga0400489_30186
349 Ga0400489_72581
350 Ga0400487_30104
351 Ga0451797_0277854
352 Ga0451807_0187439
353 Ga0451807_0748263
354 Ga0451849_0995978
355 Ga0451853_1844337
356 Ga0451577_0000033
357 Ga0451577_0000160
358 Ga0451577_0000314
359 Ga0451577_0008267
360 Ga0451577_0029851
361 Ga0451577_0034109
362 Ga0453683_0003090
363 Ga0453683_0009598
364 Ga0453684_0000052
365 Ga0453684_0000096
366 Ga0453684_0000109
367 Ga0453684_0000453
368 Ga0453684_0006767
369 Ga0453684_0007314
370 Ga0453684_0019125
371 Ga0453684_0033872
372 Ga0453684_0046169
373 Ga0453684_0053573
374 Ga0453684_0075265
375 Ga0453684_0079362
376 Ga0453684_0080223
377 Ga0453684_0113205
378 Ga0453684_0199795
379 Ga0453684_0376309
380 Ga0466960_0005255
381 Ga0451576_0000523
382 Ga0495589_0048525
383 Ga0501036_0172045
384 Ga0501038_0026932
385 Ga0501039_0196952
386 Ga0501040_0104228
387 Ga0501067_0032489
388 Ga0501072_0218196
389 Ga0501073_0039379
390 Ga0501077_0022670
391 Ga0501077_0084984
392 Ga0501083_0002297
393 Ga0501044_0154574
394 nmdc:mga05p37_41580_c1
395 nmdc:mga05p37_49431_c1
396 nmdc:mga09592_27491_c1
397 nmdc:mga0qj67_46008_c1
398 nmdc:mga06r32_1809_c1
399 Ga0500658_0059277
400 Ga0500637_0033912
401 Ga0501084_0020837
402 Ga0501084_0088188
403 Ga0530510_0175117
404 2740994876

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00291

PALP

Pyridoxal-phosphate dependent enzyme

73

401

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ey5-assembly1.cif.gz_D lbcats 0.9769 22 402
7rnp-assembly2.cif.gz_B engineered tryptophan synthase b-subunit from pyrococcus furiosus, pftrpb2b9_h275e with 4-cl-trp non-covalently bound 0.9765 23 403
5t6m-assembly1.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.976 23 403
5dw3-assembly1.cif.gz_A tryptophan synthase beta-subunit from pyrococcus furiosus with product l-tryptophan non-covalently bound in the active site 0.9742 23 403
6ami-assembly1.cif.gz_B engineered tryptophan synthase b-subunit from pyrococcus furiosus, pftrpb4d11 with trp non-covalently bound 0.9731 23 403
ID Description Score Start End Superfamily
2rhgB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9733 24 220 3.40.50.1100
af_Q60179_69_392_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9648 73 397 3.40.50.1100
af_Q60179_69_392_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9619 73 397 3.40.50.1100
af_P14671_91_282_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9601 34 216 3.40.50.1100
2rhgB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9595 24 220 3.40.50.1100
ID Description Score Start End GO Terms
AF-G5SXB3-F1-model_v4 tryptophan synthase (EC 4.2.1.20) 1.007 125 189 GO:0004834
GO:0005737
AF-A0A317YN28-F1-model_v4 tryptophan synthase (EC 4.2.1.20) 0.9987 119 221 GO:0004834
GO:0005737
AF-A0A2X3CN98-F1-model_v4 Tryptophan synthase beta chain (EC 4.2.1.20) 0.991 108 234 GO:0004834
GO:0005737
AF-A0A6P0ERD7-F1-model_v4 deleted 0.9891 116 216
AF-Q3HUY4-F1-model_v4 tryptophan synthase (EC 4.2.1.20) 0.9867 106 253 GO:0004834
GO:0005737

Map