F310073
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 202 | 126 | 202 | 77 |
Family's Representative Sequence
| Representative Sequence | 3300031852|Ga0307410_10301380|Ga0307410_103013802 |
| Length | 77 |
| Sequence | MKLVQVYNTFSSADANLVCSSLQSAGIAAQVTNELSSLSLDGYALASGGIRVMVPEEQFAEARAIIDQANETPPETE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300004801 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) | Metatranscriptome | Unclassified |
| 2 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 3 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 6 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 8 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 9 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 10 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 13 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 19 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 20 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 22 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 24 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 25 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 26 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 27 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 28 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 30 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 31 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 32 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 33 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 34 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 35 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 36 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 37 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 38 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 40 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 41 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 42 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 43 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 44 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 45 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 85 | 3300028654 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG | Metagenome | Rhizosphere |
| 86 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 87 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 88 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 89 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 90 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 91 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 92 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 93 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 94 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 95 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 96 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 97 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 98 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 99 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 100 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 101 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 102 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 103 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 104 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 105 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 106 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 107 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 108 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 109 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300049680 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_B_3_drought | Metagenome | Rhizosphere |
| 121 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 124 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 125 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 126 | 3300059424 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.5 |
| Metatranscriptomes | 0.5 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 99.5 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.5 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0058860_11533711 | 3300004801 | Bacteria | 715 |
| 2 | Ga0065707_10021777 | 3300005295 | Bacteria | 1361 |
| 3 | Ga0070658_10836046 | 3300005327 | Unclassified | 800 |
| 4 | Ga0070683_100708460 | 3300005329 | Unclassified | 964 |
| 5 | Ga0070683_100777023 | 3300005329 | Unclassified | 918 |
| 6 | Ga0070690_100063477 | 3300005330 | Bacteria | 2384 |
| 7 | Ga0070690_100738966 | 3300005330 | Bacteria | 759 |
| 8 | Ga0070690_101129286 | 3300005330 | Bacteria | 623 |
| 9 | Ga0070690_101351548 | 3300005330 | Unclassified | 572 |
| 10 | Ga0070690_101386747 | 3300005330 | Unclassified | 565 |
| 11 | Ga0070690_101598954 | 3300005330 | Unclassified | 528 |
| 12 | Ga0070670_101127625 | 3300005331 | Unclassified | 716 |
| 13 | Ga0070680_101071590 | 3300005336 | Unclassified | 696 |
| 14 | Ga0068868_102173993 | 3300005338 | Bacteria | 528 |
| 15 | Ga0070689_100009494 | 3300005340 | Bacteria | 6898 |
| 16 | Ga0070689_100079703 | 3300005340 | Bacteria | 2569 |
| 17 | Ga0070689_100105257 | 3300005340 | Bacteria | 2238 |
| 18 | Ga0070689_100148382 | 3300005340 | Bacteria | 1890 |
| 19 | Ga0070689_100252786 | 3300005340 | Unclassified | 1455 |
| 20 | Ga0070689_101608271 | 3300005340 | Unclassified | 590 |
| 21 | Ga0070691_10681217 | 3300005341 | Bacteria | 615 |
| 22 | Ga0070673_102362962 | 3300005364 | Bacteria | 505 |
| 23 | Ga0070688_100246360 | 3300005365 | Bacteria | 1271 |
| 24 | Ga0070688_100294587 | 3300005365 | Bacteria | 1171 |
| 25 | Ga0070688_101609104 | 3300005365 | Unclassified | 530 |
| 26 | Ga0070701_10939620 | 3300005438 | Unclassified | 599 |
| 27 | Ga0070711_100901338 | 3300005439 | Unclassified | 755 |
| 28 | Ga0070711_101105129 | 3300005439 | Unclassified | 683 |
| 29 | Ga0070705_100559300 | 3300005440 | Bacteria | 878 |
| 30 | Ga0070694_101668207 | 3300005444 | Unclassified | 542 |
| 31 | Ga0070694_101854618 | 3300005444 | Unclassified | 514 |
| 32 | Ga0070694_101900252 | 3300005444 | Unclassified | 508 |
| 33 | Ga0070708_100077665 | 3300005445 | Bacteria | 3000 |
| 34 | Ga0070681_10110308 | 3300005458 | Unclassified | 2691 |
| 35 | Ga0068867_100631794 | 3300005459 | Bacteria | 937 |
| 36 | Ga0068867_101187628 | 3300005459 | Unclassified | 700 |
| 37 | Ga0070685_10290410 | 3300005466 | Bacteria | 1098 |
| 38 | Ga0070685_10505550 | 3300005466 | Unclassified | 856 |
| 39 | Ga0070685_11196072 | 3300005466 | Unclassified | 577 |
| 40 | Ga0070707_100250066 | 3300005468 | Bacteria | 1725 |
| 41 | Ga0070699_101126303 | 3300005518 | Bacteria | 720 |
| 42 | Ga0070679_101565741 | 3300005530 | Unclassified | 606 |
| 43 | Ga0070684_101803393 | 3300005535 | Unclassified | 577 |
| 44 | Ga0070704_100165304 | 3300005549 | Bacteria | 1754 |
| 45 | Ga0070704_100808547 | 3300005549 | Bacteria | 838 |
| 46 | Ga0068855_100208076 | 3300005563 | Bacteria | 2200 |
| 47 | Ga0068855_100516764 | 3300005563 | Bacteria | 1296 |
| 48 | Ga0068856_100079071 | 3300005614 | Bacteria | 3261 |
| 49 | Ga0070702_100186903 | 3300005615 | Bacteria | 1360 |
| 50 | Ga0068859_100052334 | 3300005617 | Bacteria | 4105 |
| 51 | Ga0068859_100052629 | 3300005617 | Unclassified | 4094 |
| 52 | Ga0068859_100829359 | 3300005617 | Bacteria | 1011 |
| 53 | Ga0068859_101304368 | 3300005617 | Bacteria | 800 |
| 54 | Ga0068859_101517231 | 3300005617 | Unclassified | 740 |
| 55 | Ga0068864_102529642 | 3300005618 | Unclassified | 519 |
| 56 | Ga0068864_102598887 | 3300005618 | Unclassified | 512 |
| 57 | Ga0068861_101460737 | 3300005719 | Bacteria | 670 |
| 58 | Ga0068863_100009412 | 3300005841 | Bacteria | 9537 |
| 59 | Ga0068863_100996709 | 3300005841 | Bacteria | 840 |
| 60 | Ga0068863_101030867 | 3300005841 | Bacteria | 826 |
| 61 | Ga0068858_101162093 | 3300005842 | Unclassified | 758 |
| 62 | Ga0068858_101306850 | 3300005842 | Unclassified | 714 |
| 63 | Ga0068860_100421600 | 3300005843 | Bacteria | 1323 |
| 64 | Ga0068860_102084578 | 3300005843 | Unclassified | 588 |
| 65 | Ga0068862_100048391 | 3300005844 | Bacteria | 3630 |
| 66 | Ga0081455_10593815 | 3300005937 | Unclassified | 723 |
| 67 | Ga0070715_10913069 | 3300006163 | Unclassified | 541 |
| 68 | Ga0097621_100228982 | 3300006237 | Bacteria | 1622 |
| 69 | Ga0097621_101641881 | 3300006237 | Unclassified | 611 |
| 70 | Ga0068871_101447593 | 3300006358 | Bacteria | 648 |
| 71 | Ga0075428_100458061 | 3300006844 | Bacteria | 1366 |
| 72 | Ga0075431_100028225 | 3300006847 | Bacteria | 5763 |
| 73 | Ga0075434_100610918 | 3300006871 | Unclassified | 1109 |
| 74 | Ga0075434_101128014 | 3300006871 | Unclassified | 797 |
| 75 | Ga0075429_100154407 | 3300006880 | Bacteria | 2010 |
| 76 | Ga0068865_100285233 | 3300006881 | Unclassified | 1316 |
| 77 | Ga0097620_100052333 | 3300006931 | Bacteria | 4105 |
| 78 | Ga0097620_100052630 | 3300006931 | Unclassified | 4094 |
| 79 | Ga0097620_100829297 | 3300006931 | Bacteria | 1011 |
| 80 | Ga0097620_101304557 | 3300006931 | Bacteria | 800 |
| 81 | Ga0097620_101517398 | 3300006931 | Unclassified | 740 |
| 82 | Ga0111539_10180195 | 3300009094 | Bacteria | 2468 |
| 83 | Ga0111539_10306520 | 3300009094 | Bacteria | 1848 |
| 84 | Ga0105245_11441266 | 3300009098 | Unclassified | 739 |
| 85 | Ga0114129_12638518 | 3300009147 | Unclassified | 599 |
| 86 | Ga0105241_10300532 | 3300009174 | Bacteria | 1377 |
| 87 | Ga0105242_10439605 | 3300009176 | Bacteria | 1227 |
| 88 | Ga0105238_10095239 | 3300009551 | Bacteria | 2964 |
| 89 | Ga0105249_13417563 | 3300009553 | Unclassified | 511 |
| 90 | Ga0105239_11213015 | 3300010375 | Bacteria | 869 |
| 91 | Ga0105246_10813400 | 3300011119 | Unclassified | 830 |
| 92 | Ga0157374_10050451 | 3300013296 | Bacteria | 3868 |
| 93 | Ga0157374_10057714 | 3300013296 | Bacteria | 3626 |
| 94 | Ga0157378_10479944 | 3300013297 | Bacteria | 1238 |
| 95 | Ga0163162_11320384 | 3300013306 | Unclassified | 820 |
| 96 | Ga0163162_11342603 | 3300013306 | Unclassified | 813 |
| 97 | Ga0157375_10000006 | 3300013308 | Bacteria | 384086 |
| 98 | Ga0157375_10345739 | 3300013308 | Bacteria | 1653 |
| 99 | Ga0163163_10000147 | 3300014325 | Bacteria | 73154 |
| 100 | Ga0163163_11004414 | 3300014325 | Unclassified | 898 |
| 101 | Ga0157377_10703463 | 3300014745 | Bacteria | 734 |
| 102 | Ga0157379_11990573 | 3300014968 | Unclassified | 574 |
| 103 | Ga0157376_10969916 | 3300014969 | Unclassified | 871 |
| 104 | Ga0157376_12197921 | 3300014969 | Unclassified | 590 |
| 105 | Ga0207685_10714640 | 3300025905 | Unclassified | 546 |
| 106 | Ga0207684_10748287 | 3300025910 | Unclassified | 829 |
| 107 | Ga0207695_10078116 | 3300025913 | Bacteria | 3359 |
| 108 | Ga0207663_11207430 | 3300025916 | Unclassified | 609 |
| 109 | Ga0207660_11291117 | 3300025917 | Unclassified | 593 |
| 110 | Ga0207646_11198472 | 3300025922 | Bacteria | 666 |
| 111 | Ga0207694_10141584 | 3300025924 | Unclassified | 1934 |
| 112 | Ga0207644_11648349 | 3300025931 | Unclassified | 538 |
| 113 | Ga0207670_10013644 | 3300025936 | Bacteria | 4798 |
| 114 | Ga0207670_10161357 | 3300025936 | Bacteria | 1673 |
| 115 | Ga0207670_10234743 | 3300025936 | Bacteria | 1410 |
| 116 | Ga0207670_10299913 | 3300025936 | Bacteria | 1258 |
| 117 | Ga0207670_10611797 | 3300025936 | Unclassified | 895 |
| 118 | Ga0207670_11387747 | 3300025936 | Unclassified | 596 |
| 119 | Ga0207670_11440440 | 3300025936 | Bacteria | 585 |
| 120 | Ga0207704_11309552 | 3300025938 | Unclassified | 619 |
| 121 | Ga0207661_10661365 | 3300025944 | Unclassified | 960 |
| 122 | Ga0207667_11482009 | 3300025949 | Bacteria | 650 |
| 123 | Ga0207667_11939623 | 3300025949 | Unclassified | 550 |
| 124 | Ga0207703_10701278 | 3300026035 | Unclassified | 963 |
| 125 | Ga0207703_11502781 | 3300026035 | Bacteria | 648 |
| 126 | Ga0207703_11775625 | 3300026035 | Unclassified | 593 |
| 127 | Ga0207708_11234086 | 3300026075 | Bacteria | 654 |
| 128 | Ga0207702_10582565 | 3300026078 | Unclassified | 1097 |
| 129 | Ga0207702_12094919 | 3300026078 | Unclassified | 555 |
| 130 | Ga0207641_10347732 | 3300026088 | Bacteria | 1412 |
| 131 | Ga0207641_11094939 | 3300026088 | Bacteria | 795 |
| 132 | Ga0207648_10133039 | 3300026089 | Bacteria | 2189 |
| 133 | Ga0207648_10681430 | 3300026089 | Bacteria | 952 |
| 134 | Ga0207676_12076654 | 3300026095 | Unclassified | 567 |
| 135 | Ga0207675_101586281 | 3300026118 | Bacteria | 675 |
| 136 | Ga0268265_10080288 | 3300028380 | Bacteria | 2572 |
| 137 | Ga0268264_10449840 | 3300028381 | Bacteria | 1248 |
| 138 | Ga0268264_11843485 | 3300028381 | Unclassified | 615 |
| 139 | Ga0265323_10031950 | 3300028653 | Bacteria | 1954 |
| 140 | Ga0265322_10172186 | 3300028654 | Unclassified | 619 |
| 141 | Ga0265338_10020104 | 3300028800 | Bacteria | 7041 |
| 142 | Ga0265338_10046845 | 3300028800 | Bacteria | 3956 |
| 143 | Ga0265338_10479016 | 3300028800 | Unclassified | 878 |
| 144 | Ga0265320_10138271 | 3300031240 | Bacteria | 1104 |
| 145 | Ga0265316_10394754 | 3300031344 | Bacteria | 997 |
| 146 | Ga0265316_10593956 | 3300031344 | Unclassified | 785 |
| 147 | Ga0316577_10291295 | 3300031733 | Bacteria | 925 |
| 148 | Ga0307410_10301380 | 3300031852 | Unclassified | 1265 |
| 149 | Ga0307406_10808360 | 3300031901 | Unclassified | 792 |
| 150 | Ga0307412_10407803 | 3300031911 | Unclassified | 1108 |
| 151 | Ga0307416_100141653 | 3300032002 | Bacteria | 2187 |
| 152 | Ga0307414_11390231 | 3300032004 | Unclassified | 652 |
| 153 | Ga0316580_10135207 | 3300032139 | Bacteria | 756 |
| 154 | Ga0373943_0205966 | 3300035170 | Bacteria | 1090 |
| 155 | Ga0373946_0726485 | 3300035171 | Unclassified | 520 |
| 156 | Ga0373931_0061859 | 3300035691 | Bacteria | 2020 |
| 157 | Ga0373931_0709943 | 3300035691 | Bacteria | 665 |
| 158 | Ga0373931_0954293 | 3300035691 | Unclassified | 578 |
| 159 | Ga0373935_0167969 | 3300035692 | Unclassified | 1499 |
| 160 | Ga0373927_0304757 | 3300035695 | Bacteria | 1048 |
| 161 | Ga0373927_0994587 | 3300035695 | Unclassified | 553 |
| 162 | Ga0373947_0313388 | 3300035725 | Bacteria | 1048 |
| 163 | Ga0373937_0146604 | 3300036401 | Bacteria | 2210 |
| 164 | Ga0316582_0202968 | 3300036647 | Bacteria | 1353 |
| 165 | Ga0316584_0152663 | 3300036712 | Bacteria | 1719 |
| 166 | Ga0373925_0255490 | 3300037068 | Bacteria | 1406 |
| 167 | Ga0373925_0772949 | 3300037068 | Unclassified | 792 |
| 168 | Ga0373925_0907123 | 3300037068 | Bacteria | 726 |
| 169 | Ga0451577_0002655 | 3300042876 | Bacteria | 20946 |
| 170 | Ga0451577_0837861 | 3300042876 | Unclassified | 830 |
| 171 | Ga0451577_1090075 | 3300042876 | Bacteria | 715 |
| 172 | Ga0451577_1990990 | 3300042876 | Unclassified | 508 |
| 173 | Ga0453684_0031943 | 3300044712 | Bacteria | 7382 |
| 174 | Ga0453684_0724499 | 3300044712 | Bacteria | 1079 |
| 175 | Ga0451576_0211893 | 3300045051 | Bacteria | 2023 |
| 176 | Ga0451576_0513827 | 3300045051 | Bacteria | 1258 |
| 177 | Ga0451576_0589428 | 3300045051 | Bacteria | 1168 |
| 178 | Ga0451576_1279821 | 3300045051 | Unclassified | 765 |
| 179 | Ga0451576_1336318 | 3300045051 | Bacteria | 747 |
| 180 | Ga0495594_0846207 | 3300046499 | Bacteria | 515 |
| 181 | Ga0495630_0685821 | 3300046517 | Unclassified | 784 |
| 182 | Ga0495630_0911404 | 3300046517 | Bacteria | 669 |
| 183 | Ga0495666_0213794 | 3300046526 | Unclassified | 884 |
| 184 | Ga0495586_0342132 | 3300046535 | Unclassified | 859 |
| 185 | Ga0495621_0170236 | 3300046539 | Bacteria | 865 |
| 186 | Ga0495656_0594211 | 3300046615 | Unclassified | 592 |
| 187 | Ga0495588_0537849 | 3300046674 | Unclassified | 612 |
| 188 | Ga0495658_0699901 | 3300046683 | Bacteria | 649 |
| 189 | Ga0495613_0142357 | 3300046689 | Bacteria | 1713 |
| 190 | Ga0495675_0239330 | 3300047444 | Bacteria | 1093 |
| 191 | Ga0495684_0864684 | 3300047471 | Unclassified | 585 |
| 192 | Ga0501250_048296 | 3300049680 | Unclassified | 646 |
| 193 | nmdc:mga09592_72052_c1 | 3300050508 | Bacteria | 2933 |
| 194 | nmdc:mga06r32_500052_c1 | 3300050510 | Bacteria | 1193 |
| 195 | nmdc:mga08y16_230347_c1 | 3300050511 | Bacteria | 1916 |
| 196 | nmdc:mga08y16_555914_c1 | 3300050511 | Bacteria | 1161 |
| 197 | nmdc:mga08y16_735744_c1 | 3300050511 | Bacteria | 983 |
| 198 | nmdc:mga0n895_899426_c1 | 3300050512 | Unclassified | 871 |
| 199 | nmdc:mga0a205_1600075_c1 | 3300050515 | Unclassified | 500 |
| 200 | nmdc:mga0a205_434825_c1 | 3300050515 | Unclassified | 871 |
| 201 | nmdc:mga0a205_732693_c1 | 3300050515 | Bacteria | 837 |
| 202 | Ga0590075_046521 | 3300059424 | Unclassified | 1112 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005365 | Ga0070688_101609104 | Ga0070688_1016091042 | 70 |
| 2 | 3300025936 | Ga0207670_10611797 | Ga0207670_106117972 | 70 |
| 3 | 3300005327 | Ga0070658_10836046 | Ga0070658_108360462 | 71 |
| 4 | 3300005329 | Ga0070683_100708460 | Ga0070683_1007084601 | 71 |
| 5 | 3300005330 | Ga0070690_101386747 | Ga0070690_1013867472 | 71 |
| 6 | 3300005341 | Ga0070691_10681217 | Ga0070691_106812172 | 71 |
| 7 | 3300005364 | Ga0070673_102362962 | Ga0070673_1023629622 | 71 |
| 8 | 3300005458 | Ga0070681_10110308 | Ga0070681_101103082 | 71 |
| 9 | 3300005563 | Ga0068855_100208076 | Ga0068855_1002080762 | 71 |
| 10 | 3300005563 | Ga0068855_100516764 | Ga0068855_1005167642 | 71 |
| 11 | 3300005614 | Ga0068856_100079071 | Ga0068856_1000790712 | 71 |
| 12 | 3300005842 | Ga0068858_101306850 | Ga0068858_1013068502 | 71 |
| 13 | 3300006237 | Ga0097621_100228982 | Ga0097621_1002289822 | 71 |
| 14 | 3300006237 | Ga0097621_101641881 | Ga0097621_1016418811 | 71 |
| 15 | 3300006358 | Ga0068871_101447593 | Ga0068871_1014475931 | 71 |
| 16 | 3300009094 | Ga0111539_10306520 | Ga0111539_103065202 | 71 |
| 17 | 3300009551 | Ga0105238_10095239 | Ga0105238_100952392 | 71 |
| 18 | 3300010375 | Ga0105239_11213015 | Ga0105239_112130152 | 71 |
| 19 | 3300013308 | Ga0157375_10345739 | Ga0157375_103457392 | 71 |
| 20 | 3300014325 | Ga0163163_10000147 | Ga0163163_100001476 | 71 |
| 21 | 3300025924 | Ga0207694_10141584 | Ga0207694_101415842 | 71 |
| 22 | 3300025944 | Ga0207661_10661365 | Ga0207661_106613652 | 71 |
| 23 | 3300025949 | Ga0207667_11482009 | Ga0207667_114820092 | 71 |
| 24 | 3300025949 | Ga0207667_11939623 | Ga0207667_119396232 | 71 |
| 25 | 3300026035 | Ga0207703_11775625 | Ga0207703_117756252 | 71 |
| 26 | 3300026078 | Ga0207702_10582565 | Ga0207702_105825652 | 71 |
| 27 | 3300050511 | nmdc:mga08y16_555914_c1 | nmdc:mga08y16_555914_c1_644_862 | 71 |
| 28 | 3300050515 | nmdc:mga0a205_1600075_c1 | nmdc:mga0a205_1600075_c1_64_303 | 71 |
| 29 | 3300005468 | Ga0070707_100250066 | Ga0070707_1002500662 | 72 |
| 30 | 3300006871 | Ga0075434_101128014 | Ga0075434_1011280142 | 72 |
| 31 | 3300009553 | Ga0105249_13417563 | Ga0105249_134175632 | 72 |
| 32 | 3300025922 | Ga0207646_11198472 | Ga0207646_111984721 | 72 |
| 33 | 3300036401 | Ga0373937_0146604 | Ga0373937_0146604_282_521 | 72 |
| 34 | 3300037068 | Ga0373925_0772949 | Ga0373925_0772949_308_547 | 72 |
| 35 | 3300042876 | Ga0451577_1090075 | Ga0451577_1090075_146_379 | 72 |
| 36 | 3300046517 | Ga0495630_0685821 | Ga0495630_0685821_427_645 | 72 |
| 37 | 3300047471 | Ga0495684_0864684 | Ga0495684_0864684_207_446 | 72 |
| 38 | 3300005329 | Ga0070683_100777023 | Ga0070683_1007770232 | 73 |
| 39 | 3300005330 | Ga0070690_101351548 | Ga0070690_1013515482 | 73 |
| 40 | 3300005330 | Ga0070690_101598954 | Ga0070690_1015989541 | 73 |
| 41 | 3300005331 | Ga0070670_101127625 | Ga0070670_1011276252 | 73 |
| 42 | 3300005336 | Ga0070680_101071590 | Ga0070680_1010715902 | 73 |
| 43 | 3300005340 | Ga0070689_100105257 | Ga0070689_1001052572 | 73 |
| 44 | 3300005340 | Ga0070689_100148382 | Ga0070689_1001483823 | 73 |
| 45 | 3300005439 | Ga0070711_100901338 | Ga0070711_1009013382 | 73 |
| 46 | 3300005439 | Ga0070711_101105129 | Ga0070711_1011051291 | 73 |
| 47 | 3300005444 | Ga0070694_101668207 | Ga0070694_1016682071 | 73 |
| 48 | 3300005444 | Ga0070694_101854618 | Ga0070694_1018546181 | 73 |
| 49 | 3300005444 | Ga0070694_101900252 | Ga0070694_1019002521 | 73 |
| 50 | 3300005459 | Ga0068867_100631794 | Ga0068867_1006317942 | 73 |
| 51 | 3300005466 | Ga0070685_10290410 | Ga0070685_102904102 | 73 |
| 52 | 3300005466 | Ga0070685_10505550 | Ga0070685_105055502 | 73 |
| 53 | 3300005466 | Ga0070685_11196072 | Ga0070685_111960722 | 73 |
| 54 | 3300005530 | Ga0070679_101565741 | Ga0070679_1015657412 | 73 |
| 55 | 3300005535 | Ga0070684_101803393 | Ga0070684_1018033931 | 73 |
| 56 | 3300005549 | Ga0070704_100165304 | Ga0070704_1001653042 | 73 |
| 57 | 3300005617 | Ga0068859_100052334 | Ga0068859_1000523344 | 73 |
| 58 | 3300005617 | Ga0068859_100052629 | Ga0068859_1000526292 | 73 |
| 59 | 3300005617 | Ga0068859_101304368 | Ga0068859_1013043682 | 73 |
| 60 | 3300005618 | Ga0068864_102529642 | Ga0068864_1025296422 | 73 |
| 61 | 3300005618 | Ga0068864_102598887 | Ga0068864_1025988872 | 73 |
| 62 | 3300005719 | Ga0068861_101460737 | Ga0068861_1014607372 | 73 |
| 63 | 3300005841 | Ga0068863_101030867 | Ga0068863_1010308672 | 73 |
| 64 | 3300005842 | Ga0068858_101162093 | Ga0068858_1011620932 | 73 |
| 65 | 3300005843 | Ga0068860_100421600 | Ga0068860_1004216002 | 73 |
| 66 | 3300005843 | Ga0068860_102084578 | Ga0068860_1020845782 | 73 |
| 67 | 3300005844 | Ga0068862_100048391 | Ga0068862_1000483912 | 73 |
| 68 | 3300005937 | Ga0081455_10593815 | Ga0081455_105938152 | 73 |
| 69 | 3300006163 | Ga0070715_10913069 | Ga0070715_109130692 | 73 |
| 70 | 3300006931 | Ga0097620_100052333 | Ga0097620_1000523333 | 73 |
| 71 | 3300006931 | Ga0097620_100052630 | Ga0097620_1000526302 | 73 |
| 72 | 3300006931 | Ga0097620_101304557 | Ga0097620_1013045572 | 73 |
| 73 | 3300009098 | Ga0105245_11441266 | Ga0105245_114412661 | 73 |
| 74 | 3300009176 | Ga0105242_10439605 | Ga0105242_104396051 | 73 |
| 75 | 3300011119 | Ga0105246_10813400 | Ga0105246_108134002 | 73 |
| 76 | 3300013296 | Ga0157374_10050451 | Ga0157374_100504512 | 73 |
| 77 | 3300013296 | Ga0157374_10057714 | Ga0157374_100577145 | 73 |
| 78 | 3300013297 | Ga0157378_10479944 | Ga0157378_104799441 | 73 |
| 79 | 3300013306 | Ga0163162_11320384 | Ga0163162_113203842 | 73 |
| 80 | 3300013308 | Ga0157375_10000006 | Ga0157375_10000006314 | 73 |
| 81 | 3300014325 | Ga0163163_11004414 | Ga0163163_110044142 | 73 |
| 82 | 3300014745 | Ga0157377_10703463 | Ga0157377_107034631 | 73 |
| 83 | 3300014968 | Ga0157379_11990573 | Ga0157379_119905732 | 73 |
| 84 | 3300014969 | Ga0157376_10969916 | Ga0157376_109699162 | 73 |
| 85 | 3300014969 | Ga0157376_12197921 | Ga0157376_121979212 | 73 |
| 86 | 3300025905 | Ga0207685_10714640 | Ga0207685_107146402 | 73 |
| 87 | 3300025910 | Ga0207684_10748287 | Ga0207684_107482872 | 73 |
| 88 | 3300025913 | Ga0207695_10078116 | Ga0207695_100781162 | 73 |
| 89 | 3300025916 | Ga0207663_11207430 | Ga0207663_112074302 | 73 |
| 90 | 3300025917 | Ga0207660_11291117 | Ga0207660_112911172 | 73 |
| 91 | 3300025931 | Ga0207644_11648349 | Ga0207644_116483492 | 73 |
| 92 | 3300025936 | Ga0207670_10161357 | Ga0207670_101613572 | 73 |
| 93 | 3300025936 | Ga0207670_10299913 | Ga0207670_102999132 | 73 |
| 94 | 3300026035 | Ga0207703_10701278 | Ga0207703_107012782 | 73 |
| 95 | 3300026035 | Ga0207703_11502781 | Ga0207703_115027811 | 73 |
| 96 | 3300026088 | Ga0207641_11094939 | Ga0207641_110949392 | 73 |
| 97 | 3300026089 | Ga0207648_10681430 | Ga0207648_106814302 | 73 |
| 98 | 3300026095 | Ga0207676_12076654 | Ga0207676_120766542 | 73 |
| 99 | 3300026118 | Ga0207675_101586281 | Ga0207675_1015862812 | 73 |
| 100 | 3300028380 | Ga0268265_10080288 | Ga0268265_100802882 | 73 |
| 101 | 3300028381 | Ga0268264_10449840 | Ga0268264_104498402 | 73 |
| 102 | 3300028381 | Ga0268264_11843485 | Ga0268264_118434852 | 73 |
| 103 | 3300028800 | Ga0265338_10020104 | Ga0265338_100201042 | 73 |
| 104 | 3300028800 | Ga0265338_10046845 | Ga0265338_100468455 | 73 |
| 105 | 3300031240 | Ga0265320_10138271 | Ga0265320_101382712 | 73 |
| 106 | 3300031344 | Ga0265316_10593956 | Ga0265316_105939562 | 73 |
| 107 | 3300031733 | Ga0316577_10291295 | Ga0316577_102912952 | 73 |
| 108 | 3300032139 | Ga0316580_10135207 | Ga0316580_101352072 | 73 |
| 109 | 3300035170 | Ga0373943_0205966 | Ga0373943_0205966_789_1034 | 73 |
| 110 | 3300035171 | Ga0373946_0726485 | Ga0373946_0726485_113_358 | 73 |
| 111 | 3300035691 | Ga0373931_0061859 | Ga0373931_0061859_1530_1790 | 73 |
| 112 | 3300035691 | Ga0373931_0709943 | Ga0373931_0709943_288_512 | 73 |
| 113 | 3300035691 | Ga0373931_0954293 | Ga0373931_0954293_77_298 | 73 |
| 114 | 3300035692 | Ga0373935_0167969 | Ga0373935_0167969_719_964 | 73 |
| 115 | 3300035695 | Ga0373927_0304757 | Ga0373927_0304757_205_450 | 73 |
| 116 | 3300035695 | Ga0373927_0994587 | Ga0373927_0994587_211_450 | 73 |
| 117 | 3300035725 | Ga0373947_0313388 | Ga0373947_0313388_753_998 | 73 |
| 118 | 3300036647 | Ga0316582_0202968 | Ga0316582_0202968_897_1133 | 73 |
| 119 | 3300036712 | Ga0316584_0152663 | Ga0316584_0152663_1384_1620 | 73 |
| 120 | 3300037068 | Ga0373925_0255490 | Ga0373925_0255490_472_717 | 73 |
| 121 | 3300042876 | Ga0451577_0002655 | Ga0451577_0002655_16461_16697 | 73 |
| 122 | 3300042876 | Ga0451577_0837861 | Ga0451577_0837861_251_475 | 73 |
| 123 | 3300042876 | Ga0451577_1990990 | Ga0451577_1990990_70_294 | 73 |
| 124 | 3300044712 | Ga0453684_0031943 | Ga0453684_0031943_190_426 | 73 |
| 125 | 3300044712 | Ga0453684_0724499 | Ga0453684_0724499_663_887 | 73 |
| 126 | 3300045051 | Ga0451576_0513827 | Ga0451576_0513827_467_709 | 73 |
| 127 | 3300045051 | Ga0451576_1279821 | Ga0451576_1279821_249_473 | 73 |
| 128 | 3300046499 | Ga0495594_0846207 | Ga0495594_0846207_168_401 | 73 |
| 129 | 3300046526 | Ga0495666_0213794 | Ga0495666_0213794_102_347 | 73 |
| 130 | 3300046535 | Ga0495586_0342132 | Ga0495586_0342132_271_495 | 73 |
| 131 | 3300046539 | Ga0495621_0170236 | Ga0495621_0170236_572_814 | 73 |
| 132 | 3300046615 | Ga0495656_0594211 | Ga0495656_0594211_97_339 | 73 |
| 133 | 3300046683 | Ga0495658_0699901 | Ga0495658_0699901_141_380 | 73 |
| 134 | 3300046689 | Ga0495613_0142357 | Ga0495613_0142357_1401_1637 | 73 |
| 135 | 3300047444 | Ga0495675_0239330 | Ga0495675_0239330_697_933 | 73 |
| 136 | 3300050511 | nmdc:mga08y16_735744_c1 | nmdc:mga08y16_735744_c1_414_656 | 73 |
| 137 | 3300050515 | nmdc:mga0a205_434825_c1 | nmdc:mga0a205_434825_c1_141_401 | 73 |
| 138 | 3300004801 | Ga0058860_11533711 | Ga0058860_115337112 | 74 |
| 139 | 3300005295 | Ga0065707_10021777 | Ga0065707_100217772 | 74 |
| 140 | 3300005330 | Ga0070690_100063477 | Ga0070690_1000634772 | 74 |
| 141 | 3300005330 | Ga0070690_100738966 | Ga0070690_1007389662 | 74 |
| 142 | 3300005330 | Ga0070690_101129286 | Ga0070690_1011292862 | 74 |
| 143 | 3300005338 | Ga0068868_102173993 | Ga0068868_1021739932 | 74 |
| 144 | 3300005340 | Ga0070689_100009494 | Ga0070689_1000094945 | 74 |
| 145 | 3300005340 | Ga0070689_100079703 | Ga0070689_1000797033 | 74 |
| 146 | 3300005340 | Ga0070689_100252786 | Ga0070689_1002527862 | 74 |
| 147 | 3300005340 | Ga0070689_101608271 | Ga0070689_1016082711 | 74 |
| 148 | 3300005365 | Ga0070688_100246360 | Ga0070688_1002463602 | 74 |
| 149 | 3300005365 | Ga0070688_100294587 | Ga0070688_1002945872 | 74 |
| 150 | 3300005438 | Ga0070701_10939620 | Ga0070701_109396202 | 74 |
| 151 | 3300005440 | Ga0070705_100559300 | Ga0070705_1005593002 | 74 |
| 152 | 3300005445 | Ga0070708_100077665 | Ga0070708_1000776653 | 74 |
| 153 | 3300005459 | Ga0068867_101187628 | Ga0068867_1011876282 | 74 |
| 154 | 3300005518 | Ga0070699_101126303 | Ga0070699_1011263032 | 74 |
| 155 | 3300005549 | Ga0070704_100808547 | Ga0070704_1008085472 | 74 |
| 156 | 3300005615 | Ga0070702_100186903 | Ga0070702_1001869032 | 74 |
| 157 | 3300005617 | Ga0068859_100829359 | Ga0068859_1008293592 | 74 |
| 158 | 3300005617 | Ga0068859_101517231 | Ga0068859_1015172312 | 74 |
| 159 | 3300005841 | Ga0068863_100009412 | Ga0068863_1000094122 | 74 |
| 160 | 3300005841 | Ga0068863_100996709 | Ga0068863_1009967092 | 74 |
| 161 | 3300006844 | Ga0075428_100458061 | Ga0075428_1004580612 | 74 |
| 162 | 3300006847 | Ga0075431_100028225 | Ga0075431_1000282257 | 74 |
| 163 | 3300006871 | Ga0075434_100610918 | Ga0075434_1006109182 | 74 |
| 164 | 3300006880 | Ga0075429_100154407 | Ga0075429_1001544073 | 74 |
| 165 | 3300006881 | Ga0068865_100285233 | Ga0068865_1002852332 | 74 |
| 166 | 3300006931 | Ga0097620_100829297 | Ga0097620_1008292972 | 74 |
| 167 | 3300006931 | Ga0097620_101517398 | Ga0097620_1015173982 | 74 |
| 168 | 3300009094 | Ga0111539_10180195 | Ga0111539_101801952 | 74 |
| 169 | 3300009147 | Ga0114129_12638518 | Ga0114129_126385182 | 74 |
| 170 | 3300009174 | Ga0105241_10300532 | Ga0105241_103005323 | 74 |
| 171 | 3300013306 | Ga0163162_11342603 | Ga0163162_113426032 | 74 |
| 172 | 3300025936 | Ga0207670_10013644 | Ga0207670_100136442 | 74 |
| 173 | 3300025936 | Ga0207670_10234743 | Ga0207670_102347432 | 74 |
| 174 | 3300025936 | Ga0207670_11387747 | Ga0207670_113877472 | 74 |
| 175 | 3300025936 | Ga0207670_11440440 | Ga0207670_114404401 | 74 |
| 176 | 3300025938 | Ga0207704_11309552 | Ga0207704_113095521 | 74 |
| 177 | 3300026075 | Ga0207708_11234086 | Ga0207708_112340862 | 74 |
| 178 | 3300026078 | Ga0207702_12094919 | Ga0207702_120949191 | 74 |
| 179 | 3300026088 | Ga0207641_10347732 | Ga0207641_103477322 | 74 |
| 180 | 3300026089 | Ga0207648_10133039 | Ga0207648_101330393 | 74 |
| 181 | 3300028653 | Ga0265323_10031950 | Ga0265323_100319502 | 74 |
| 182 | 3300028654 | Ga0265322_10172186 | Ga0265322_101721861 | 74 |
| 183 | 3300028800 | Ga0265338_10479016 | Ga0265338_104790162 | 74 |
| 184 | 3300031344 | Ga0265316_10394754 | Ga0265316_103947542 | 74 |
| 185 | 3300031852 | Ga0307410_10301380 | Ga0307410_103013802 | 74 |
| 186 | 3300031901 | Ga0307406_10808360 | Ga0307406_108083602 | 74 |
| 187 | 3300031911 | Ga0307412_10407803 | Ga0307412_104078032 | 74 |
| 188 | 3300032002 | Ga0307416_100141653 | Ga0307416_1001416533 | 74 |
| 189 | 3300032004 | Ga0307414_11390231 | Ga0307414_113902311 | 74 |
| 190 | 3300037068 | Ga0373925_0907123 | Ga0373925_0907123_398_628 | 74 |
| 191 | 3300045051 | Ga0451576_0211893 | Ga0451576_0211893_1024_1248 | 74 |
| 192 | 3300045051 | Ga0451576_0589428 | Ga0451576_0589428_232_468 | 74 |
| 193 | 3300045051 | Ga0451576_1336318 | Ga0451576_1336318_62_286 | 74 |
| 194 | 3300046517 | Ga0495630_0911404 | Ga0495630_0911404_343_585 | 74 |
| 195 | 3300046674 | Ga0495588_0537849 | Ga0495588_0537849_196_438 | 74 |
| 196 | 3300049680 | Ga0501250_048296 | Ga0501250_048296_294_527 | 74 |
| 197 | 3300050508 | nmdc:mga09592_72052_c1 | nmdc:mga09592_72052_c1_1312_1539 | 74 |
| 198 | 3300050510 | nmdc:mga06r32_500052_c1 | nmdc:mga06r32_500052_c1_21_248 | 74 |
| 199 | 3300050511 | nmdc:mga08y16_230347_c1 | nmdc:mga08y16_230347_c1_1328_1552 | 74 |
| 200 | 3300050512 | nmdc:mga0n895_899426_c1 | nmdc:mga0n895_899426_c1_25_270 | 74 |
| 201 | 3300050515 | nmdc:mga0a205_732693_c1 | nmdc:mga0a205_732693_c1_24_284 | 74 |
| 202 | 3300059424 | Ga0590075_046521 | Ga0590075_046521_214_447 | 74 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4w4m-assembly10.cif.gz_J | crystal structure of prgk 19-92 | 0.8938 | 2 | 70 |
| 8axn-assembly1.cif.gz_a | inner membrane ring and secretin n0 n1 domains of the type 3 secretion system of shigella flexneri | 0.8775 | 2 | 70 |
| 2y9j-assembly1.cif.gz_Y | three-dimensional model of salmonella's needle complex at subnanometer resolution | 0.8602 | 4 | 68 |
| 3j6d-assembly1.cif.gz_a | model of the prgh-prgk periplasmic rings | 0.8362 | 4 | 68 |
| 5dmu-assembly1.cif.gz_A | structure of the nhej polymerase from methanocella paludicola | 0.8356 | 10 | 55 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P0AD21_4_109_2.60.40.1130 | Mainly Beta;Sandwich;Immunoglobulin-like;Rab geranylgeranyltransferase alpha-subunit, insert domain | 0.8947 | 13 | 68 | 2.60.40.1130 |
| 2mkyA00 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Hypothetical protein rpa1041 | 0.7845 | 4 | 68 | 3.30.70.1530 |
| af_Q57993_77_188_3.30.300.20 | Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;K homology (KH) domain | 0.7675 | 10 | 31 | 3.30.300.20 |
| 2mkyA00 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Hypothetical protein rpa1041 | 0.7273 | 4 | 68 | 3.30.70.1530 |
| 1zhvA00 | Alpha Beta;2-Layer Sandwich;VC0802-like;VC0802-like | 0.7247 | 7 | 68 | 3.30.2130.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2D8UUH9-F1-model_v4 | DUF2007 domain-containing protein | 0.9394 | 1 | 71 |
|
| AF-A0A7M3MDQ8-F1-model_v4 | DUF2007 domain-containing protein | 0.9327 | 1 | 74 |
GO:0016020
|
| AF-A0A3N7HVU4-F1-model_v4 | DUF2007 domain-containing protein | 0.9321 | 2 | 72 |
GO:0016020
|
| AF-A0A522RZB6-F1-model_v4 | DUF2007 domain-containing protein | 0.9318 | 2 | 71 |
GO:0016020
|
| AF-A0A3R9XXT2-F1-model_v4 | DUF2007 domain-containing protein | 0.9313 | 1 | 67 |
|
Predicted Structure (AlphaFold2)
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