F309462

General Info

Members Datasets Scaffolds Average Seq Length
202 133 198 353

Family's Representative Sequence

Representative Sequence 3300005366|Ga0070659_100044300|Ga0070659_1000443003
Length 377
Sequence MADITRPIRSPKPRSRKTSNSGENSSRRAAGASTAVQDDSPEVLRGYYERMSLVREFELRASEMYARAKIGGYCHLNLGEEATVVGLMAALQPRDYLYTTYRDHGYALLRGMKPGPVMAELFGRSDGVVGGRGGSMHMFDSELRMMGGYGIVGGQIPPATGAAFAIQYRSEAGPDSEAVMCILGDGTTNIGAFHESLNLAGIWNLPIVYVIVNNKLGMGTTVEAASAEPDLYKRGSAYRIPGERVNGDDPIAVRDGALRALKRAREERQPMLLEATSFRLRGHSVVDPARYRSKEDTAEAQSNDPIPAFRQKLVASKVFTEEEAEQIHAAADKTVTDAVTFADASPSPAVDTLFDYVYATPVANAASALPGDPVMQS

Samples

Sample ID Description Type Environment
1 2558860280 Kutzneria sp. 744 Isolate Unclassified
2 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
3 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
4 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
48 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
49 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
71 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
72 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
77 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
78 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
79 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
83 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
84 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
85 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
88 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
89 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
92 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
93 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
94 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
95 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
96 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
97 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
98 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
99 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
100 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
101 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
102 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
103 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
104 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
105 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
106 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
109 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
110 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
123 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
124 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
125 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
126 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
127 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
128 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
129 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
130 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
131 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
132 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
133 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.63
Metatranscriptomes 11.39
Isolates 1.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.45
Nodule 0
Rhizoplane 0.99
Rhizosphere 89.11
Stem 0
Stem Tuber 0.5
Unclassified 3.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10049286 3300003323 Bacteria 4165
2 Ga0058860_11700053 3300004801 Bacteria 3621
3 Ga0070658_10000178 3300005327 Bacteria 55790
4 Ga0070658_10002485 3300005327 Bacteria 15401
5 Ga0070658_10035753 3300005327 Bacteria 4002
6 Ga0070683_100007916 3300005329 Bacteria 9010
7 Ga0070683_100067287 3300005329 Bacteria 3337
8 Ga0070683_100127137 3300005329 Bacteria 2410
9 Ga0070691_10090037 3300005341 Bacteria 1512
10 Ga0070659_100044300 3300005366 Bacteria 3483
11 Ga0070667_100257026 3300005367 Bacteria 1563
12 Ga0070709_10012813 3300005434 Bacteria 4700
13 Ga0070714_100035772 3300005435 Bacteria 4163
14 Ga0070714_100180410 3300005435 Bacteria 1921
15 Ga0070713_100006090 3300005436 Bacteria 8318
16 Ga0070708_100011806 3300005445 Bacteria 7109
17 Ga0070708_100016675 3300005445 Bacteria 6103
18 Ga0070708_100142026 3300005445 Bacteria 2227
19 Ga0070663_100081763 3300005455 Bacteria 2375
20 Ga0070681_10069455 3300005458 Bacteria 3489
21 Ga0070685_10121123 3300005466 Bacteria 1625
22 Ga0070706_100013280 3300005467 Bacteria 7618
23 Ga0070706_100015945 3300005467 Bacteria 6939
24 Ga0070706_100020855 3300005467 Bacteria 6033
25 Ga0070706_100022499 3300005467 Bacteria 5802
26 Ga0070706_100376211 3300005467 Bacteria 1323
27 Ga0070707_100000767 3300005468 Bacteria 31712
28 Ga0070707_100021348 3300005468 Bacteria 6119
29 Ga0070707_100046635 3300005468 Bacteria 4147
30 Ga0070707_100070047 3300005468 Bacteria 3378
31 Ga0070698_100015592 3300005471 Bacteria 8026
32 Ga0070698_100052490 3300005471 Bacteria 4147
33 Ga0070699_100001868 3300005518 Bacteria 19075
34 Ga0070699_100025472 3300005518 Bacteria 5099
35 Ga0070699_100032881 3300005518 Unclassified 4480
36 Ga0070699_100187838 3300005518 Bacteria 1835
37 Ga0070679_100141798 3300005530 Bacteria 2382
38 Ga0070679_100192210 3300005530 Bacteria 2010
39 Ga0070684_100004069 3300005535 Bacteria 11064
40 Ga0070684_100046080 3300005535 Bacteria 3777
41 Ga0070684_100152954 3300005535 Bacteria 2091
42 Ga0070697_100005799 3300005536 Bacteria 9524
43 Ga0070697_100008622 3300005536 Bacteria 7960
44 Ga0070697_100046596 3300005536 Bacteria 3514
45 Ga0070697_100051790 3300005536 Unclassified 3336
46 Ga0070696_100001918 3300005546 Bacteria 13687
47 Ga0068855_100007397 3300005563 Bacteria 13296
48 Ga0068855_100074701 3300005563 Bacteria 3936
49 Ga0068855_100193614 3300005563 Bacteria 2292
50 Ga0070664_100035372 3300005564 Bacteria 4193
51 Ga0068856_100387797 3300005614 Bacteria 1417
52 Ga0068852_100123498 3300005616 Bacteria 2374
53 Ga0070717_10002528 3300006028 Bacteria 12884
54 Ga0070717_10003066 3300006028 Bacteria 11907
55 Ga0070717_10013474 3300006028 Bacteria 6267
56 Ga0075364_10052727 3300006051 Bacteria 2659
57 Ga0075364_10070605 3300006051 Bacteria 2300
58 Ga0075367_10166842 3300006178 Bacteria 1370
59 Ga0105240_10012624 3300009093 Bacteria 11646
60 Ga0105241_10134500 3300009174 Bacteria 2006
61 Ga0105237_10052463 3300009545 Bacteria 4093
62 Ga0105239_10078811 3300010375 Bacteria 3625
63 Ga0157370_10002679 3300013104 Bacteria 21339
64 Ga0157370_10005456 3300013104 Bacteria 14261
65 Ga0157369_10005825 3300013105 Bacteria 14330
66 Ga0157369_10007676 3300013105 Bacteria 12411
67 Ga0157369_10058624 3300013105 Bacteria 4153
68 Ga0157369_10181381 3300013105 Bacteria 2215
69 Ga0157369_10307729 3300013105 Bacteria 1648
70 Ga0197907_11386585 3300020069 Bacteria 1306
71 Ga0206349_1052431 3300020075 Bacteria 5032
72 Ga0206351_10317564 3300020077 Bacteria 2423
73 Ga0206351_10658919 3300020077 Bacteria 1427
74 Ga0206351_11010121 3300020077 Bacteria 1264
75 Ga0206352_10877456 3300020078 Bacteria 6643
76 Ga0206350_10260350 3300020080 Bacteria 2370
77 Ga0206350_10327232 3300020080 Unclassified 4272
78 Ga0206350_10491636 3300020080 Bacteria 1904
79 Ga0206350_11564858 3300020080 Bacteria 3691
80 Ga0206354_10434782 3300020081 Bacteria 1897
81 Ga0206353_10809611 3300020082 Bacteria 8336
82 Ga0206353_10970336 3300020082 Bacteria 1813
83 Ga0206353_11731590 3300020082 Bacteria 1259
84 Ga0206353_11865848 3300020082 Bacteria 3286
85 Ga0154015_1684890 3300020610 Bacteria 2134
86 Ga0213874_10017882 3300021377 Bacteria 1908
87 Ga0224712_10001034 3300022467 Bacteria 6102
88 Ga0224712_10002436 3300022467 Bacteria 4589
89 Ga0224712_10002828 3300022467 Bacteria 4376
90 Ga0224712_10006743 3300022467 Bacteria 3298
91 Ga0224712_10007037 3300022467 Bacteria 3250
92 Ga0224712_10017825 3300022467 Bacteria 2361
93 Ga0207642_10055181 3300025899 Bacteria 1816
94 Ga0207699_10046319 3300025906 Bacteria 2543
95 Ga0207705_10000001 3300025909 Bacteria 2061880
96 Ga0207705_10006672 3300025909 Bacteria 8537
97 Ga0207684_10002716 3300025910 Bacteria 17654
98 Ga0207684_10006521 3300025910 Bacteria 10634
99 Ga0207684_10026899 3300025910 Bacteria 4906
100 Ga0207684_10098931 3300025910 Unclassified 2491
101 Ga0207654_10111026 3300025911 Bacteria 1706
102 Ga0207695_10162502 3300025913 Bacteria 2164
103 Ga0207695_10359551 3300025913 Bacteria 1342
104 Ga0207671_10095209 3300025914 Bacteria 2248
105 Ga0207652_10024491 3300025921 Bacteria 5008
106 Ga0207652_10172768 3300025921 Bacteria 1939
107 Ga0207646_10001981 3300025922 Bacteria 24584
108 Ga0207646_10005784 3300025922 Bacteria 12947
109 Ga0207646_10086752 3300025922 Bacteria 2801
110 Ga0207700_10003960 3300025928 Bacteria 8662
111 Ga0207664_10001988 3300025929 Bacteria 13460
112 Ga0207690_10006657 3300025932 Bacteria 6846
113 Ga0207661_10005869 3300025944 Bacteria 8666
114 Ga0207661_10161320 3300025944 Bacteria 1945
115 Ga0207661_10343452 3300025944 Bacteria 1345
116 Ga0207679_10078370 3300025945 Bacteria 2517
117 Ga0207667_10007280 3300025949 Bacteria 13342
118 Ga0207667_10011525 3300025949 Bacteria 10274
119 Ga0207667_10282525 3300025949 Bacteria 1696
120 Ga0207678_10079379 3300026067 Bacteria 2810
121 Ga0207708_10025990 3300026075 Bacteria 4429
122 Ga0207702_10231837 3300026078 Bacteria 1726
123 Ga0207641_10117966 3300026088 Bacteria 2364
124 Ga0207698_10063809 3300026142 Bacteria 2885
125 Ga0265325_10016168 3300031241 Bacteria 4174
126 Ga0265340_10007298 3300031247 Bacteria 6008
127 Ga0265313_10034023 3300031595 Bacteria 2582
128 Ga0265342_10043610 3300031712 Bacteria 2706
129 Ga0307409_100013071 3300031995 Bacteria 5322
130 Ga0307416_100007049 3300032002 Bacteria 7096
131 Ga0373934_0042891 3300035086 Bacteria 1788
132 Ga0373936_0065830 3300035113 Bacteria 1487
133 Ga0373955_0048546 3300035172 Bacteria 2302
134 Ga0373933_0003359 3300035724 Bacteria 8920
135 Ga0373933_0069396 3300035724 Bacteria 2142
136 Ga0373937_0065382 3300036401 Bacteria 3348
137 Ga0373925_0091345 3300037068 Bacteria 2328
138 Ga0395900_0145526 3300037418 Bacteria 2423
139 Ga0395898_0054241 3300037466 Bacteria 3912
140 Ga0436364_1062504 3300037853 Unclassified 1895
141 Ga0395901_0163362 3300038443 Bacteria 2338
142 Ga0436365_1653505 3300039437 Bacteria 2501
143 Ga0436363_0526002 3300039450 Bacteria 16824
144 Ga0436363_1157345 3300039450 Bacteria 3160
145 Ga0466969_0006501 3300044656 Bacteria 6220
146 Ga0466969_0024258 3300044656 Bacteria 3119
147 Ga0466972_0000693 3300044658 Bacteria 16122
148 Ga0466972_0004333 3300044658 Bacteria 7090
149 Ga0466965_0022091 3300044683 Bacteria 3067
150 Ga0466966_0014782 3300044684 Bacteria 5163
151 Ga0466961_0013486 3300044693 Bacteria 5234
152 Ga0466961_0131488 3300044693 Bacteria 1568
153 Ga0466963_0007865 3300044694 Bacteria 6381
154 Ga0466963_0026307 3300044694 Bacteria 3721
155 Ga0466971_0018806 3300044719 Bacteria 3063
156 Ga0466968_0000304 3300044735 Bacteria 15721
157 Ga0466957_0057138 3300044842 Bacteria 2387
158 Ga0466960_0002657 3300044901 Bacteria 6740
159 Ga0466959_0032559 3300045049 Unclassified 3859
160 Ga0466959_0055776 3300045049 Unclassified 2884
161 Ga0466958_0040456 3300045836 Bacteria 2801
162 Ga0495651_0016223 3300046462 Bacteria 5771
163 Ga0495653_0005446 3300046463 Bacteria 10372
164 Ga0495664_0002921 3300046477 Bacteria 9224
165 Ga0495618_0163093 3300046514 Bacteria 1420
166 Ga0495628_0054488 3300046516 Bacteria 3153
167 Ga0495652_0054825 3300046529 Bacteria 3393
168 Ga0495587_0006780 3300046536 Bacteria 7455
169 Ga0495635_0003003 3300046663 Bacteria 11586
170 Ga0495588_0001505 3300046674 Bacteria 9983
171 Ga0495657_0009011 3300046675 Bacteria 7592
172 Ga0495680_0005070 3300047322 Bacteria 12432
173 Ga0495680_0082801 3300047322 Bacteria 2420
174 Ga0495684_0060832 3300047471 Bacteria 2874
175 Ga0495602_0107197 3300048088 Bacteria 2278
176 Ga0496104_0174098 3300048907 Bacteria 2063
177 Ga0496110_0051174 3300048913 Bacteria 3630
178 Ga0501034_0031237 3300049571 Bacteria 5411
179 Ga0501037_0003617 3300049573 Bacteria 11202
180 Ga0501038_0112148 3300049574 Unclassified 2258
181 Ga0501042_0068525 3300049578 Bacteria 2537
182 Ga0501047_0012441 3300049581 Bacteria 8056
183 Ga0501069_0011509 3300049585 Bacteria 4687
184 Ga0501070_0002823 3300049586 Bacteria 15159
185 Ga0501070_0045069 3300049586 Bacteria 3669
186 Ga0501071_0000114 3300049587 Bacteria 31703
187 Ga0501044_0055942 3300049823 Bacteria 4050
188 Ga0501044_0070997 3300049823 Bacteria 3542
189 nmdc:mga00v17_92898_c1 3300050491 Bacteria 1897
190 nmdc:mga0k408_44271_c1 3300050493 Bacteria 2566
191 nmdc:mga06z11_105031_c1 3300050494 Bacteria 1556
192 nmdc:mga04h51_51564_c1 3300050495 Bacteria 1383
193 nmdc:mga05p37_242256_c1 3300050507 Bacteria 2167
194 Ga0500555_001040 3300053103 Bacteria 9351
195 Ga0500568_0008855 3300053139 Bacteria 4819
196 Ga0500616_0001008 3300053153 Bacteria 30220
197 Ga0500645_001109 3300053730 Bacteria 14713
198 Ga0466962_0044632 3300061719 Bacteria 2120

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005327 Ga0070658_10035753 Ga0070658_100357534 311
2 3300013105 Ga0157369_10058624 Ga0157369_100586243 311
3 3300020080 Ga0206350_10260350 Ga0206350_102603503 311
4 3300025949 Ga0207667_10011525 Ga0207667_100115259 311
5 3300038443 Ga0395901_0163362 Ga0395901_0163362_1110_2303 314
6 3300039450 Ga0436363_0526002 Ga0436363_0526002_308_1267 314
7 3300005546 Ga0070696_100001918 Ga0070696_1000019186 318
8 3300005329 Ga0070683_100067287 Ga0070683_1000672872 321
9 3300020082 Ga0206353_10809611 Ga0206353_108096115 321
10 3300025944 Ga0207661_10161320 Ga0207661_101613202 321
11 3300013105 Ga0157369_10307729 Ga0157369_103077292 322
12 3300005530 Ga0070679_100141798 Ga0070679_1001417982 324
13 3300035086 Ga0373934_0042891 Ga0373934_0042891_731_1771 324
14 3300035113 Ga0373936_0065830 Ga0373936_0065830_174_1214 324
15 3300046663 Ga0495635_0003003 Ga0495635_0003003_4050_5090 324
16 3300047322 Ga0495680_0082801 Ga0495680_0082801_1115_2155 324
17 3300047471 Ga0495684_0060832 Ga0495684_0060832_292_1332 324
18 3300005445 Ga0070708_100011806 Ga0070708_1000118064 325
19 3300005467 Ga0070706_100020855 Ga0070706_1000208553 325
20 3300005468 Ga0070707_100046635 Ga0070707_1000466354 325
21 3300005471 Ga0070698_100052490 Ga0070698_1000524904 325
22 3300005518 Ga0070699_100025472 Ga0070699_1000254722 325
23 3300005536 Ga0070697_100046596 Ga0070697_1000465963 325
24 3300006028 Ga0070717_10003066 Ga0070717_1000306610 325
25 3300025910 Ga0207684_10006521 Ga0207684_100065216 325
26 3300022467 Ga0224712_10001034 Ga0224712_100010347 326
27 3300005445 Ga0070708_100016675 Ga0070708_1000166755 327
28 3300005468 Ga0070707_100021348 Ga0070707_1000213485 327
29 3300025921 Ga0207652_10024491 Ga0207652_100244913 327
30 3300025922 Ga0207646_10001981 Ga0207646_100019818 327
31 3300005467 Ga0070706_100022499 Ga0070706_1000224994 329
32 3300005518 Ga0070699_100001868 Ga0070699_10000186816 329
33 3300005536 Ga0070697_100005799 Ga0070697_1000057997 329
34 3300006028 Ga0070717_10002528 Ga0070717_100025284 329
35 3300010375 Ga0105239_10078811 Ga0105239_100788112 329
36 3300025910 Ga0207684_10002716 Ga0207684_1000271611 329
37 3300044693 Ga0466961_0013486 Ga0466961_0013486_4196_5206 329
38 3300044901 Ga0466960_0002657 Ga0466960_0002657_5710_6699 329
39 3300044658 Ga0466972_0000693 Ga0466972_0000693_7174_8166 330
40 3300044683 Ga0466965_0022091 Ga0466965_0022091_1227_2219 330
41 3300044735 Ga0466968_0000304 Ga0466968_0000304_6237_7229 330
42 3300050495 nmdc:mga04h51_51564_c1 nmdc:mga04h51_51564_c1_315_1316 330
43 3300013104 Ga0157370_10002679 Ga0157370_1000267913 331
44 3300013105 Ga0157369_10181381 Ga0157369_101813811 335
45 3300020077 Ga0206351_10658919 Ga0206351_106589191 335
46 3300022467 Ga0224712_10002436 Ga0224712_100024362 335
47 3300037853 Ga0436364_1062504 Ga0436364_1062504_193_1269 336
48 3300044694 Ga0466963_0007865 Ga0466963_0007865_3728_4837 336
49 3300005467 Ga0070706_100376211 Ga0070706_1003762111 337
50 3300020080 Ga0206350_10491636 Ga0206350_104916362 338
51 3300022467 Ga0224712_10002828 Ga0224712_100028282 338
52 3300005327 Ga0070658_10002485 Ga0070658_100024852 339
53 3300005467 Ga0070706_100013280 Ga0070706_1000132808 339
54 3300025909 Ga0207705_10006672 Ga0207705_100066723 339
55 3300025949 Ga0207667_10282525 Ga0207667_102825252 339
56 3300031995 Ga0307409_100013071 Ga0307409_1000130714 340
57 3300032002 Ga0307416_100007049 Ga0307416_1000070495 340
58 3300005329 Ga0070683_100007916 Ga0070683_1000079167 342
59 3300005535 Ga0070684_100004069 Ga0070684_1000040695 342
60 3300005564 Ga0070664_100035372 Ga0070664_1000353725 342
61 3300025944 Ga0207661_10005869 Ga0207661_100058692 342
62 3300025945 Ga0207679_10078370 Ga0207679_100783702 342
63 3300020080 Ga0206350_11564858 Ga0206350_115648583 343
64 3300005327 Ga0070658_10000178 Ga0070658_1000017847 345
65 3300005455 Ga0070663_100081763 Ga0070663_1000817632 345
66 3300005530 Ga0070679_100192210 Ga0070679_1001922102 345
67 3300005563 Ga0068855_100193614 Ga0068855_1001936142 345
68 3300020081 Ga0206354_10434782 Ga0206354_104347822 345
69 3300020082 Ga0206353_11731590 Ga0206353_117315902 345
70 3300025909 Ga0207705_10000001 Ga0207705_10000001177 345
71 3300026067 Ga0207678_10079379 Ga0207678_100793792 345
72 3300039437 Ga0436365_1653505 Ga0436365_1653505_753_1814 345
73 3300039450 Ga0436363_1157345 Ga0436363_1157345_2077_3138 345
74 3300004801 Ga0058860_11700053 Ga0058860_117000533 346
75 3300005445 Ga0070708_100142026 Ga0070708_1001420261 346
76 3300005467 Ga0070706_100015945 Ga0070706_1000159453 346
77 3300005468 Ga0070707_100000767 Ga0070707_10000076718 346
78 3300005468 Ga0070707_100070047 Ga0070707_1000700472 346
79 3300005471 Ga0070698_100015592 Ga0070698_1000155922 346
80 3300005518 Ga0070699_100032881 Ga0070699_1000328813 346
81 3300005536 Ga0070697_100008622 Ga0070697_1000086227 346
82 3300005536 Ga0070697_100051790 Ga0070697_1000517903 346
83 3300006028 Ga0070717_10013474 Ga0070717_100134742 346
84 3300020075 Ga0206349_1052431 Ga0206349_10524313 346
85 3300020078 Ga0206352_10877456 Ga0206352_108774564 346
86 3300020080 Ga0206350_10327232 Ga0206350_103272323 346
87 3300020082 Ga0206353_10970336 Ga0206353_109703362 346
88 3300021377 Ga0213874_10017882 Ga0213874_100178822 346
89 3300025910 Ga0207684_10026899 Ga0207684_100268994 346
90 3300025910 Ga0207684_10098931 Ga0207684_100989311 346
91 3300025922 Ga0207646_10005784 Ga0207646_100057842 346
92 3300025922 Ga0207646_10086752 Ga0207646_100867522 346
93 3300035724 Ga0373933_0003359 Ga0373933_0003359_3854_4918 346
94 3300044656 Ga0466969_0006501 Ga0466969_0006501_4410_5474 346
95 3300044656 Ga0466969_0024258 Ga0466969_0024258_1980_3044 346
96 3300044658 Ga0466972_0004333 Ga0466972_0004333_341_1405 346
97 3300044684 Ga0466966_0014782 Ga0466966_0014782_1427_2491 346
98 3300044693 Ga0466961_0131488 Ga0466961_0131488_65_1129 346
99 3300044694 Ga0466963_0026307 Ga0466963_0026307_418_1482 346
100 3300044719 Ga0466971_0018806 Ga0466971_0018806_1248_2312 346
101 3300044842 Ga0466957_0057138 Ga0466957_0057138_397_1461 346
102 3300045049 Ga0466959_0032559 Ga0466959_0032559_762_1826 346
103 3300045049 Ga0466959_0055776 Ga0466959_0055776_1021_2085 346
104 3300045836 Ga0466958_0040456 Ga0466958_0040456_770_1834 346
105 3300049573 Ga0501037_0003617 Ga0501037_0003617_8628_9695 346
106 3300049574 Ga0501038_0112148 Ga0501038_0112148_1106_2173 346
107 3300049586 Ga0501070_0045069 Ga0501070_0045069_1969_3030 346
108 3300049823 Ga0501044_0070997 Ga0501044_0070997_506_1573 346
109 3300061719 Ga0466962_0044632 Ga0466962_0044632_981_2045 346
110 3300005329 Ga0070683_100127137 Ga0070683_1001271371 347
111 3300005341 Ga0070691_10090037 Ga0070691_100900372 347
112 3300005434 Ga0070709_10012813 Ga0070709_100128134 347
113 3300005435 Ga0070714_100035772 Ga0070714_1000357725 347
114 3300005436 Ga0070713_100006090 Ga0070713_1000060902 347
115 3300005458 Ga0070681_10069455 Ga0070681_100694552 347
116 3300005535 Ga0070684_100046080 Ga0070684_1000460802 347
117 3300005614 Ga0068856_100387797 Ga0068856_1003877972 347
118 3300013105 Ga0157369_10007676 Ga0157369_1000767610 347
119 3300022467 Ga0224712_10006743 Ga0224712_100067434 347
120 3300025906 Ga0207699_10046319 Ga0207699_100463194 347
121 3300025913 Ga0207695_10359551 Ga0207695_103595512 347
122 3300025921 Ga0207652_10172768 Ga0207652_101727681 347
123 3300025928 Ga0207700_10003960 Ga0207700_1000396011 347
124 3300025929 Ga0207664_10001988 Ga0207664_1000198813 347
125 3300025944 Ga0207661_10343452 Ga0207661_103434522 347
126 3300026078 Ga0207702_10231837 Ga0207702_102318371 347
127 3300035172 Ga0373955_0048546 Ga0373955_0048546_953_2014 347
128 3300035724 Ga0373933_0069396 Ga0373933_0069396_340_1401 347
129 3300036401 Ga0373937_0065382 Ga0373937_0065382_1951_3012 347
130 3300037068 Ga0373925_0091345 Ga0373925_0091345_644_1708 347
131 3300046462 Ga0495651_0016223 Ga0495651_0016223_929_1990 347
132 3300046463 Ga0495653_0005446 Ga0495653_0005446_7889_8950 347
133 3300046477 Ga0495664_0002921 Ga0495664_0002921_5635_6696 347
134 3300046514 Ga0495618_0163093 Ga0495618_0163093_332_1393 347
135 3300046516 Ga0495628_0054488 Ga0495628_0054488_1753_2814 347
136 3300046529 Ga0495652_0054825 Ga0495652_0054825_2160_3221 347
137 3300046536 Ga0495587_0006780 Ga0495587_0006780_6184_7245 347
138 3300046675 Ga0495657_0009011 Ga0495657_0009011_1931_2992 347
139 3300047322 Ga0495680_0005070 Ga0495680_0005070_4863_5924 347
140 3300048088 Ga0495602_0107197 Ga0495602_0107197_808_1869 347
141 3300049578 Ga0501042_0068525 Ga0501042_0068525_1397_2458 347
142 3300049585 Ga0501069_0011509 Ga0501069_0011509_261_1355 347
143 3300049587 Ga0501071_0000114 Ga0501071_0000114_8437_9531 347
144 3300022467 Ga0224712_10007037 Ga0224712_100070373 348
145 iso_pu_bacteria 2558860280 2559432691 348
146 iso_pu_bacteria 2946072368 2946078800 348
147 iso_pu_bacteria 2947224130 2947225080 348
148 3300005366 Ga0070659_100044300 Ga0070659_1000443003 349
149 3300005563 Ga0068855_100074701 Ga0068855_1000747012 349
150 3300005616 Ga0068852_100123498 Ga0068852_1001234983 349
151 3300009093 Ga0105240_10012624 Ga0105240_100126245 349
152 3300013104 Ga0157370_10005456 Ga0157370_1000545615 349
153 3300013105 Ga0157369_10005825 Ga0157369_1000582512 349
154 3300020069 Ga0197907_11386585 Ga0197907_113865851 349
155 3300020082 Ga0206353_11865848 Ga0206353_118658483 349
156 3300025913 Ga0207695_10162502 Ga0207695_101625022 349
157 3300025932 Ga0207690_10006657 Ga0207690_100066572 349
158 3300026142 Ga0207698_10063809 Ga0207698_100638092 349
159 3300037418 Ga0395900_0145526 Ga0395900_0145526_1090_2172 349
160 3300037466 Ga0395898_0054241 Ga0395898_0054241_1725_2807 349
161 3300046674 Ga0495588_0001505 Ga0495588_0001505_6461_7564 349
162 3300005435 Ga0070714_100180410 Ga0070714_1001804101 350
163 3300005563 Ga0068855_100007397 Ga0068855_10000739711 350
164 3300020077 Ga0206351_10317564 Ga0206351_103175642 350
165 3300020077 Ga0206351_11010121 Ga0206351_110101212 350
166 3300020610 Ga0154015_1684890 Ga0154015_16848902 350
167 3300022467 Ga0224712_10017825 Ga0224712_100178252 350
168 3300025949 Ga0207667_10007280 Ga0207667_1000728011 350
169 3300049586 Ga0501070_0002823 Ga0501070_0002823_4075_5181 350
170 3300031241 Ga0265325_10016168 Ga0265325_100161682 351
171 3300031247 Ga0265340_10007298 Ga0265340_100072983 351
172 3300031712 Ga0265342_10043610 Ga0265342_100436102 351
173 3300053103 Ga0500555_001040 Ga0500555_001040_2291_3367 351
174 3300053153 Ga0500616_0001008 Ga0500616_0001008_11226_12302 351
175 3300053730 Ga0500645_001109 Ga0500645_001109_6521_7597 351
176 iso_pu_bacteria 2899370129 2899370136 351
177 3300031595 Ga0265313_10034023 Ga0265313_100340232 353
178 3300006051 Ga0075364_10070605 Ga0075364_100706052 356
179 3300006178 Ga0075367_10166842 Ga0075367_101668421 356
180 3300050491 nmdc:mga00v17_92898_c1 nmdc:mga00v17_92898_c1_613_1710 357
181 3300050493 nmdc:mga0k408_44271_c1 nmdc:mga0k408_44271_c1_587_1684 357
182 3300050494 nmdc:mga06z11_105031_c1 nmdc:mga06z11_105031_c1_187_1284 357
183 3300053139 Ga0500568_0008855 Ga0500568_0008855_1824_2921 357
184 3300049571 Ga0501034_0031237 Ga0501034_0031237_2877_3965 362
185 3300049581 Ga0501047_0012441 Ga0501047_0012441_500_1588 362
186 3300049823 Ga0501044_0055942 Ga0501044_0055942_1872_2960 362
187 3300005466 Ga0070685_10121123 Ga0070685_101211232 363
188 3300005535 Ga0070684_100152954 Ga0070684_1001529542 363
189 3300025899 Ga0207642_10055181 Ga0207642_100551811 363
190 3300026075 Ga0207708_10025990 Ga0207708_100259903 363
191 3300026088 Ga0207641_10117966 Ga0207641_101179662 363
192 3300048907 Ga0496104_0174098 Ga0496104_0174098_875_1969 363
193 3300048913 Ga0496110_0051174 Ga0496110_0051174_365_1459 363
194 3300050507 nmdc:mga05p37_242256_c1 nmdc:mga05p37_242256_c1_322_1413 363
195 3300005367 Ga0070667_100257026 Ga0070667_1002570262 364
196 3300005518 Ga0070699_100187838 Ga0070699_1001878382 364
197 3300006051 Ga0075364_10052727 Ga0075364_100527272 364
198 3300009174 Ga0105241_10134500 Ga0105241_101345002 364
199 3300009545 Ga0105237_10052463 Ga0105237_100524633 364
200 3300025911 Ga0207654_10111026 Ga0207654_101110262 364
201 3300025914 Ga0207671_10095209 Ga0207671_100952092 364
202 3300003323 rootH1_10049286 rootH1_100492862 366

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00676

E1_dh

Dehydrogenase E1 component

49

351

0.95

PF02775

TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

133

275

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
3exh-assembly2.cif.gz_E crystal structure of the pyruvate dehydrogenase (e1p) component of human pyruvate dehydrogenase complex 0.9661 25 334
6cer-assembly2.cif.gz_G human pyruvate dehydrogenase complex e1 component v138m mutation 0.9615 25 336
3exi-assembly1.cif.gz_A-2 crystal structure of the pyruvate dehydrogenase (e1p) component of human pyruvate dehydrogenase complex with the subunit-binding domain (sbd) of e2p, but sbd cannot be modeled into the electron density 0.9615 25 334
6cer-assembly1.cif.gz_C human pyruvate dehydrogenase complex e1 component v138m mutation 0.9613 25 336
3exg-assembly4.cif.gz_O crystal structure of the pyruvate dehydrogenase (e1p) component of human pyruvate dehydrogenase complex 0.9588 25 336
ID Description Score Start End Superfamily
af_A0A1D6GTY5_25_137_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9706 139 252 3.40.50.970
af_B4FGJ4_23_381_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9581 25 341 3.40.50.970
af_I1N1B9_20_344_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9563 25 310 3.40.50.970
af_A0A1D6GTY5_25_137_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9457 139 252 3.40.50.970
1ni4C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9436 25 334 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A6I2Y6T4-F1-model_v4 Dehydrogenase E1 component domain-containing protein 0.9757 40 238 GO:0000287
GO:0004739
GO:0006086
AF-A0A7V5CX94-F1-model_v4 Pyruvate dehydrogenase (Acetyl-transferring) E1 component subunit alpha 0.9748 25 242 GO:0004739
GO:0006086
AF-A0A519MD02-F1-model_v4 Pyruvate dehydrogenase (Acetyl-transferring) E1 component subunit alpha 0.9736 33 181 GO:0004739
GO:0006086
AF-A0A2K3NCE2-F1-model_v4 Pyruvate dehydrogenase E1 component subunit alpha mitochondrial-like 0.9715 25 252 GO:0004739
GO:0006086
AF-W9SMJ1-F1-model_v4 Pyruvate dehydrogenase E1 component subunit alpha-1 0.971 25 196 GO:0004739
GO:0006086

Feature Viewer

pLDDT pTM Quality
86.11 0.84 High
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Predicted Structure (AlphaFold2)

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