F309197

General Info

Members Datasets Scaffolds Average Seq Length
201 151 175 376

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2928115317|2928119585
Length 408
Sequence DQAPDPTSSRAADRRPAGPLEGVLVVALEQAVAAPYCSSRLADAGARVIKIERSEGDFARGYDRTVGGESSYWVWINRGKESIALDVKKADDLALLERLLARADVFIQNLAPGATERLGIGSATLRERHPRLITCDITGYGDEGALRELKAYDLLVQAESGLVSVSGAPGEWGRIGVSLCDITAGMNALIGIQQALMQRERTGEGAAVKVSLFGSAAELMSVPYLQTRYGGSAPQRVGLRHPTIAPYGAFRCADGRDIVLSIQNEREWADFCRTVLQRPELLQDPRCAGNAVRVANRTYVDGAVAEVFAAQTSEEMRRRLRQAQTAYGSINSVDDLIAHPQLKTRPMAVNGMTAQVPASPWSVPWEAEEFAPAPALDAQGSAIRREFGDAAATADASPVSAGARGAIV

Samples

Sample ID Description Type Environment
1 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
2 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
3 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
4 2643221582 Rhizobium sp. Root651 Isolate Unclassified
5 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
6 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
7 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
8 2818991467 Bosea vestrisii 3192 Isolate Unclassified
9 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
10 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
11 2842357229 Rhizobium leucaenae SEMIA 4015 Isolate Nodule
12 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
13 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
14 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
15 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
16 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
17 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
18 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
19 2899275550 Paracoccus hibiscisoli CCTCC AB2016182 Isolate Rhizosphere
20 2902330777 Methylobacterium sp. 2A Isolate Unclassified
21 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
22 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
23 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
24 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
25 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
27 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
28 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
29 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
30 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
31 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
32 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
33 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
34 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
35 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
36 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
37 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
38 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
48 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
49 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
50 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
51 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
52 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
53 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
54 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
55 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
56 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
69 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
70 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
71 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
72 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
73 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
89 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
90 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
91 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
92 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
93 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
94 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
102 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
103 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
104 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
105 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
106 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
107 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
108 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
111 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
117 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
118 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
121 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
122 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
123 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
124 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
132 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
137 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
138 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
139 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
140 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
141 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
142 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
143 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
144 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
145 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
146 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
147 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
148 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
149 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
150 641522639 Methylobacterium sp. 4-46 Isolate Nodule
151 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 87.06
Metatranscriptomes 0
Isolates 12.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.43
Nodule 2.49
Rhizoplane 1
Rhizosphere 68.16
Stem 0
Stem Tuber 0
Unclassified 14.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25404J52841_10000323 3300003659 Bacteria 6335
2 Ga0070658_10010901 3300005327 Bacteria 7286
3 Ga0070670_100300688 3300005331 Bacteria 1403
4 Ga0070680_100013407 3300005336 Bacteria 6384
5 Ga0070689_100057519 3300005340 Bacteria 3018
6 Ga0070675_100135571 3300005354 Bacteria 2101
7 Ga0070673_100182055 3300005364 Bacteria 1799
8 Ga0070713_100088649 3300005436 Bacteria 2656
9 Ga0070708_100152805 3300005445 Bacteria 2147
10 Ga0070678_100009078 3300005456 Bacteria 5996
11 Ga0070678_100010931 3300005456 Bacteria 5572
12 Ga0070706_100031104 3300005467 Bacteria 4922
13 Ga0070707_100115458 3300005468 Bacteria 2605
14 Ga0070698_100000120 3300005471 Bacteria 67569
15 Ga0070679_100044522 3300005530 Bacteria 4421
16 Ga0070679_100123731 3300005530 Bacteria 2570
17 Ga0068853_100264684 3300005539 Bacteria 1582
18 Ga0070672_100070375 3300005543 Bacteria 2780
19 Ga0070672_100158473 3300005543 Bacteria 1876
20 Ga0070665_100011888 3300005548 Bacteria 8791
21 Ga0070665_100121215 3300005548 Bacteria 2617
22 Ga0068855_100131627 3300005563 Bacteria 2856
23 Ga0068857_100288342 3300005577 Bacteria 1511
24 Ga0068857_100317387 3300005577 Bacteria 1438
25 Ga0068856_100098527 3300005614 Bacteria 2913
26 Ga0068859_100207250 3300005617 Bacteria 2046
27 Ga0081455_10001586 3300005937 Bacteria 27819
28 Ga0081455_10010101 3300005937 Bacteria 9623
29 Ga0081455_10080973 3300005937 Bacteria 2660
30 Ga0081540_1000293 3300005983 Bacteria 52532
31 Ga0081539_10001753 3300005985 Bacteria 34603
32 Ga0081539_10002187 3300005985 Bacteria 28690
33 Ga0081539_10006498 3300005985 Bacteria 11179
34 Ga0070717_10122083 3300006028 Bacteria 2233
35 Ga0075365_10056126 3300006038 Bacteria 2617
36 Ga0075365_10106957 3300006038 Bacteria 1920
37 Ga0075363_100026270 3300006048 Bacteria 2977
38 Ga0075362_10004295 3300006177 Bacteria 5096
39 Ga0075362_10006076 3300006177 Bacteria 4471
40 Ga0075362_10021966 3300006177 Bacteria 2684
41 Ga0075362_10060047 3300006177 Bacteria 1718
42 Ga0075367_10043048 3300006178 Bacteria 2644
43 Ga0075367_10071528 3300006178 Bacteria 2086
44 Ga0075367_10127311 3300006178 Bacteria 1572
45 Ga0075369_10008222 3300006186 Bacteria 4008
46 Ga0075369_10023999 3300006186 Bacteria 2525
47 Ga0075366_10001316 3300006195 Bacteria 12389
48 Ga0075430_100129206 3300006846 Bacteria 2106
49 Ga0097620_100207248 3300006931 Bacteria 2046
50 Ga0097620_100260756 3300006931 Bacteria 1824
51 Ga0099794_10028752 3300007265 Bacteria 2587
52 Ga0105240_10022508 3300009093 Bacteria 8351
53 Ga0105245_10474608 3300009098 Bacteria 1263
54 Ga0105246_10201140 3300011119 Bacteria 1549
55 Ga0105246_10310453 3300011119 Bacteria 1277
56 Ga0157369_10230335 3300013105 Bacteria 1937
57 Ga0157372_10361974 3300013307 Bacteria 1690
58 Ga0157375_10235282 3300013308 Bacteria 1991
59 Ga0163163_10160064 3300014325 Bacteria 2297
60 Ga0182008_10001013 3300014497 Bacteria 19519
61 Ga0157379_10106754 3300014968 Bacteria 2514
62 Ga0182007_10001065 3300015262 Bacteria 14966
63 Ga0213872_10030819 3300021361 Bacteria 2458
64 Ga0213876_10002314 3300021384 Bacteria 11239
65 Ga0213875_10040609 3300021388 Bacteria 2190
66 Ga0224572_1004123 3300024225 Bacteria 2507
67 Ga0207688_10027686 3300025901 Bacteria 3117
68 Ga0207707_10009870 3300025912 Bacteria 8275
69 Ga0207707_10054318 3300025912 Bacteria 3487
70 Ga0207695_10057721 3300025913 Bacteria 4032
71 Ga0207662_10102520 3300025918 Bacteria 1775
72 Ga0207652_10014692 3300025921 Bacteria 6346
73 Ga0207652_10247954 3300025921 Bacteria 1606
74 Ga0207650_10037417 3300025925 Bacteria 3536
75 Ga0207659_10309292 3300025926 Bacteria 1301
76 Ga0207700_10176485 3300025928 Bacteria 1786
77 Ga0207664_10093581 3300025929 Bacteria 2468
78 Ga0207689_10093173 3300025942 Bacteria 2475
79 Ga0207667_10033340 3300025949 Bacteria 5538
80 Ga0207667_10195346 3300025949 Bacteria 2076
81 Ga0207702_10083540 3300026078 Bacteria 2779
82 Ga0207702_10092707 3300026078 Bacteria 2648
83 Ga0207674_10042221 3300026116 Bacteria 4712
84 Ga0207683_10021759 3300026121 Bacteria 5497
85 Ga0207683_10173775 3300026121 Bacteria 1952
86 Ga0207683_10198279 3300026121 Bacteria 1824
87 Ga0268266_10013387 3300028379 Bacteria 7065
88 Ga0268266_10095774 3300028379 Bacteria 2607
89 Ga0265320_10001870 3300031240 Bacteria 14890
90 Ga0265325_10000162 3300031241 Bacteria 47234
91 Ga0307509_10250809 3300031507 Bacteria 1554
92 Ga0265314_10009432 3300031711 Bacteria 8231
93 Ga0307406_10176558 3300031901 Bacteria 1551
94 Ga0315911_1000049 3300033442 Bacteria 36480
95 Ga0373932_0015351 3300035112 Bacteria 1940
96 Ga0373937_0203060 3300036401 Bacteria 1863
97 Ga0373925_0019721 3300037068 Bacteria 4908
98 Ga0395900_0031018 3300037418 Bacteria 5491
99 Ga0395900_0374843 3300037418 Bacteria 1392
100 Ga0436364_0428458 3300037853 Bacteria 10356
101 Ga0436364_0452964 3300037853 Bacteria 3128
102 Ga0436364_0509863 3300037853 Bacteria 8868
103 Ga0436364_1004380 3300037853 Bacteria 2746
104 Ga0436364_1226977 3300037853 Bacteria 15195
105 Ga0395901_0001144 3300038443 Bacteria 28148
106 Ga0395901_0015474 3300038443 Bacteria 7768
107 Ga0395901_0050054 3300038443 Bacteria 4341
108 Ga0395901_0541688 3300038443 Bacteria 1180
109 Ga0436365_0799904 3300039437 Bacteria 37639
110 Ga0436360_0595008 3300039438 Bacteria 2340
111 Ga0436360_1149308 3300039438 Bacteria 1798
112 Ga0436361_0045774 3300039447 Bacteria 6274
113 Ga0436363_0735561 3300039450 Bacteria 7023
114 Ga0439436_0000165 3300041404 Bacteria 15608
115 Ga0439433_0027464 3300041999 Bacteria 1291
116 Ga0439457_012443 3300042014 Bacteria 1918
117 Ga0439462_0001427 3300042015 Bacteria 5316
118 Ga0439446_0003812 3300042156 Bacteria 3776
119 Ga0439446_0013944 3300042156 Bacteria 2211
120 Ga0451577_0006717 3300042876 Bacteria 11419
121 Ga0466966_0011935 3300044684 Bacteria 5758
122 Ga0466961_0028637 3300044693 Bacteria 3582
123 Ga0453684_0126944 3300044712 Bacteria 3068
124 Ga0466968_0013634 3300044735 Bacteria 3197
125 Ga0451576_0000210 3300045051 Bacteria 146650
126 Ga0451576_0169095 3300045051 Bacteria 2281
127 Ga0495625_0093026 3300046660 Bacteria 2082
128 Ga0495635_0152054 3300046663 Bacteria 1576
129 Ga0495669_0000022 3300046684 Bacteria 117864
130 Ga0495669_0000576 3300046684 Bacteria 16289
131 Ga0496100_0130450 3300048903 Bacteria 1770
132 Ga0496114_0089773 3300048917 Bacteria 2608
133 Ga0496117_0022006 3300048920 Bacteria 5128
134 Ga0496121_0005544 3300048924 Bacteria 16120
135 Ga0496122_0051796 3300048925 Bacteria 3114
136 Ga0496126_0073161 3300048929 Bacteria 3048
137 Ga0501033_0032016 3300049570 Bacteria 3948
138 Ga0501034_0001576 3300049571 Bacteria 29774
139 Ga0501034_0010245 3300049571 Bacteria 9777
140 Ga0501034_0077156 3300049571 Bacteria 3337
141 Ga0501034_0113159 3300049571 Bacteria 2704
142 Ga0501037_0034421 3300049573 Bacteria 3738
143 Ga0501038_0030204 3300049574 Bacteria 4798
144 Ga0501043_0010630 3300049579 Bacteria 7208
145 Ga0501043_0182080 3300049579 Bacteria 1637
146 Ga0501047_0022294 3300049581 Bacteria 6084
147 Ga0501047_0170024 3300049581 Bacteria 2048
148 Ga0501048_0162049 3300049582 Bacteria 1583
149 Ga0501070_0082140 3300049586 Bacteria 2667
150 Ga0501070_0216835 3300049586 Bacteria 1570
151 Ga0501073_0056273 3300049589 Bacteria 2751
152 Ga0501073_0189729 3300049589 Bacteria 1422
153 Ga0501080_0018891 3300049742 Bacteria 6383
154 Ga0501080_0213441 3300049742 Bacteria 1768
155 Ga0501081_0303040 3300049743 Bacteria 1172
156 Ga0501035_0042319 3300049822 Bacteria 4109
157 Ga0501044_0020642 3300049823 Bacteria 7034
158 Ga0501044_0104841 3300049823 Bacteria 2841
159 Ga0501044_0118998 3300049823 Bacteria 2644
160 nmdc:mga03n38_62165_c1 3300050490 Bacteria 1702
161 nmdc:mga00v17_158065_c1 3300050491 Bacteria 1458
162 nmdc:mga0k408_23612_c1 3300050493 Bacteria 3471
163 nmdc:mga06z11_56919_c1 3300050494 Bacteria 2024
164 nmdc:mga07m45_27993_c1 3300050496 Bacteria 3109
165 nmdc:mga07m45_8087_c1 3300050496 Bacteria 5393
166 nmdc:mga0qj67_10116_c1 3300050509 Bacteria 3532
167 nmdc:mga0sz30_740_c1 3300050516 Bacteria 11932
168 Ga0500641_0000477 3300053096 Bacteria 14606
169 Ga0500568_0005393 3300053139 Bacteria 6614
170 Ga0500616_0000493 3300053153 Bacteria 50877
171 Ga0500616_0009579 3300053153 Bacteria 5880
172 Ga0500616_0066157 3300053153 Bacteria 1856
173 Ga0500627_0048326 3300053158 Bacteria 1848
174 Ga0500552_000149 3300053733 Bacteria 5984
175 Ga0466962_0046235 3300061719 Bacteria 2080

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049743 Ga0501081_0303040 Ga0501081_0303040_14_979 316
2 3300049571 Ga0501034_0113159 Ga0501034_0113159_81_1196 355
3 3300006177 Ga0075362_10004295 Ga0075362_100042951 357
4 3300031507 Ga0307509_10250809 Ga0307509_102508092 357
5 3300044684 Ga0466966_0011935 Ga0466966_0011935_233_1390 357
6 3300044693 Ga0466961_0028637 Ga0466961_0028637_413_1570 357
7 3300050490 nmdc:mga03n38_62165_c1 nmdc:mga03n38_62165_c1_195_1316 357
8 3300005985 Ga0081539_10002187 Ga0081539_1000218718 359
9 3300014325 Ga0163163_10160064 Ga0163163_101600642 359
10 3300026078 Ga0207702_10092707 Ga0207702_100927072 359
11 3300041404 Ga0439436_0000165 Ga0439436_0000165_7037_8137 362
12 3300041999 Ga0439433_0027464 Ga0439433_0027464_143_1243 362
13 3300042014 Ga0439457_012443 Ga0439457_012443_481_1581 362
14 3300042015 Ga0439462_0001427 Ga0439462_0001427_56_1156 362
15 3300042156 Ga0439446_0013944 Ga0439446_0013944_412_1512 362
16 3300042876 Ga0451577_0006717 Ga0451577_0006717_5933_7072 363
17 3300061719 Ga0466962_0046235 Ga0466962_0046235_769_1947 363
18 iso_pu_bacteria 2881101125 2881103968 364
19 3300048920 Ga0496117_0022006 Ga0496117_0022006_956_2071 367
20 3300048925 Ga0496122_0051796 Ga0496122_0051796_829_1944 367
21 iso_pu_bacteria 2818991467 2819719422 367
22 iso_pu_bacteria 2842357229 2842359171 367
23 3300049589 Ga0501073_0189729 Ga0501073_0189729_113_1252 368
24 3300014968 Ga0157379_10106754 Ga0157379_101067542 369
25 3300036401 Ga0373937_0203060 Ga0373937_0203060_232_1347 369
26 3300037068 Ga0373925_0019721 Ga0373925_0019721_303_1415 369
27 iso_pu_bacteria 2643221654 2644301037 369
28 3300005331 Ga0070670_100300688 Ga0070670_1003006881 370
29 3300005340 Ga0070689_100057519 Ga0070689_1000575192 370
30 3300005364 Ga0070673_100182055 Ga0070673_1001820552 370
31 3300005577 Ga0068857_100317387 Ga0068857_1003173872 370
32 3300009098 Ga0105245_10474608 Ga0105245_104746081 370
33 3300011119 Ga0105246_10310453 Ga0105246_103104531 370
34 3300013308 Ga0157375_10235282 Ga0157375_102352822 370
35 3300025918 Ga0207662_10102520 Ga0207662_101025202 370
36 3300025942 Ga0207689_10093173 Ga0207689_100931732 370
37 3300048929 Ga0496126_0073161 Ga0496126_0073161_331_1443 370
38 3300049571 Ga0501034_0001576 Ga0501034_0001576_24692_25804 370
39 3300049571 Ga0501034_0010245 Ga0501034_0010245_3901_5013 370
40 3300049586 Ga0501070_0216835 Ga0501070_0216835_434_1546 370
41 iso_pu_bacteria 2643221582 2643917975 370
42 3300006038 Ga0075365_10056126 Ga0075365_100561262 371
43 3300039438 Ga0436360_1149308 Ga0436360_1149308_588_1706 371
44 3300044712 Ga0453684_0126944 Ga0453684_0126944_1184_2332 371
45 3300045051 Ga0451576_0000210 Ga0451576_0000210_8094_9242 371
46 3300053158 Ga0500627_0048326 Ga0500627_0048326_417_1571 371
47 3300005436 Ga0070713_100088649 Ga0070713_1000886492 372
48 3300005548 Ga0070665_100121215 Ga0070665_1001212152 372
49 3300006177 Ga0075362_10060047 Ga0075362_100600472 372
50 3300006178 Ga0075367_10071528 Ga0075367_100715283 372
51 3300006186 Ga0075369_10008222 Ga0075369_100082222 372
52 3300006846 Ga0075430_100129206 Ga0075430_1001292062 372
53 3300011119 Ga0105246_10201140 Ga0105246_102011402 372
54 3300021384 Ga0213876_10002314 Ga0213876_100023148 372
55 3300025928 Ga0207700_10176485 Ga0207700_101764852 372
56 3300028379 Ga0268266_10095774 Ga0268266_100957742 372
57 3300037418 Ga0395900_0031018 Ga0395900_0031018_806_1927 372
58 3300037853 Ga0436364_0452964 Ga0436364_0452964_1559_2680 372
59 3300037853 Ga0436364_1004380 Ga0436364_1004380_1346_2467 372
60 3300038443 Ga0395901_0001144 Ga0395901_0001144_13483_14604 372
61 3300039437 Ga0436365_0799904 Ga0436365_0799904_27848_28969 372
62 3300042156 Ga0439446_0003812 Ga0439446_0003812_36_1169 372
63 3300046660 Ga0495625_0093026 Ga0495625_0093026_436_1557 372
64 3300046684 Ga0495669_0000022 Ga0495669_0000022_91690_92811 372
65 3300046684 Ga0495669_0000576 Ga0495669_0000576_6749_7870 372
66 3300049571 Ga0501034_0077156 Ga0501034_0077156_229_1392 372
67 3300049581 Ga0501047_0170024 Ga0501047_0170024_118_1239 372
68 3300049582 Ga0501048_0162049 Ga0501048_0162049_180_1301 372
69 3300049586 Ga0501070_0082140 Ga0501070_0082140_756_1883 372
70 3300049589 Ga0501073_0056273 Ga0501073_0056273_601_1764 372
71 3300049823 Ga0501044_0104841 Ga0501044_0104841_1320_2441 372
72 3300050496 nmdc:mga07m45_27993_c1 nmdc:mga07m45_27993_c1_1914_3035 372
73 3300050509 nmdc:mga0qj67_10116_c1 nmdc:mga0qj67_10116_c1_1569_2690 372
74 3300053139 Ga0500568_0005393 Ga0500568_0005393_3764_4885 372
75 3300053153 Ga0500616_0000493 Ga0500616_0000493_41252_42373 372
76 iso_pu_bacteria 2883577096 2883578297 372
77 iso_pu_bacteria 2894772417 2894776799 372
78 3300005354 Ga0070675_100135571 Ga0070675_1001355712 373
79 3300005445 Ga0070708_100152805 Ga0070708_1001528053 373
80 3300005456 Ga0070678_100009078 Ga0070678_1000090786 373
81 3300005467 Ga0070706_100031104 Ga0070706_1000311043 373
82 3300005468 Ga0070707_100115458 Ga0070707_1001154581 373
83 3300005471 Ga0070698_100000120 Ga0070698_10000012052 373
84 3300005530 Ga0070679_100123731 Ga0070679_1001237312 373
85 3300005543 Ga0070672_100070375 Ga0070672_1000703752 373
86 3300005543 Ga0070672_100158473 Ga0070672_1001584732 373
87 3300005548 Ga0070665_100011888 Ga0070665_1000118882 373
88 3300005617 Ga0068859_100207250 Ga0068859_1002072502 373
89 3300005937 Ga0081455_10001586 Ga0081455_1000158624 373
90 3300005937 Ga0081455_10010101 Ga0081455_100101016 373
91 3300005985 Ga0081539_10001753 Ga0081539_1000175311 373
92 3300005985 Ga0081539_10006498 Ga0081539_1000649811 373
93 3300006028 Ga0070717_10122083 Ga0070717_101220831 373
94 3300006038 Ga0075365_10106957 Ga0075365_101069571 373
95 3300006048 Ga0075363_100026270 Ga0075363_1000262703 373
96 3300006177 Ga0075362_10006076 Ga0075362_100060765 373
97 3300006177 Ga0075362_10021966 Ga0075362_100219662 373
98 3300006178 Ga0075367_10043048 Ga0075367_100430483 373
99 3300006178 Ga0075367_10127311 Ga0075367_101273112 373
100 3300006186 Ga0075369_10023999 Ga0075369_100239992 373
101 3300006195 Ga0075366_10001316 Ga0075366_1000131612 373
102 3300006931 Ga0097620_100207248 Ga0097620_1002072482 373
103 3300007265 Ga0099794_10028752 Ga0099794_100287522 373
104 3300013105 Ga0157369_10230335 Ga0157369_102303352 373
105 3300013307 Ga0157372_10361974 Ga0157372_103619741 373
106 3300021361 Ga0213872_10030819 Ga0213872_100308192 373
107 3300025901 Ga0207688_10027686 Ga0207688_100276861 373
108 3300025926 Ga0207659_10309292 Ga0207659_103092921 373
109 3300025929 Ga0207664_10093581 Ga0207664_100935812 373
110 3300026116 Ga0207674_10042221 Ga0207674_100422213 373
111 3300026121 Ga0207683_10173775 Ga0207683_101737752 373
112 3300026121 Ga0207683_10198279 Ga0207683_101982792 373
113 3300028379 Ga0268266_10013387 Ga0268266_100133875 373
114 3300031240 Ga0265320_10001870 Ga0265320_100018706 373
115 3300031241 Ga0265325_10000162 Ga0265325_1000016215 373
116 3300031711 Ga0265314_10009432 Ga0265314_100094328 373
117 3300031901 Ga0307406_10176558 Ga0307406_101765582 373
118 3300035112 Ga0373932_0015351 Ga0373932_0015351_577_1701 373
119 3300037853 Ga0436364_0509863 Ga0436364_0509863_4409_5542 373
120 3300038443 Ga0395901_0015474 Ga0395901_0015474_1177_2301 373
121 3300038443 Ga0395901_0050054 Ga0395901_0050054_3048_4172 373
122 3300038443 Ga0395901_0541688 Ga0395901_0541688_16_1140 373
123 3300039438 Ga0436360_0595008 Ga0436360_0595008_930_2126 373
124 3300039447 Ga0436361_0045774 Ga0436361_0045774_728_1873 373
125 3300039450 Ga0436363_0735561 Ga0436363_0735561_5127_6254 373
126 3300046663 Ga0495635_0152054 Ga0495635_0152054_10_1137 373
127 3300049570 Ga0501033_0032016 Ga0501033_0032016_2113_3237 373
128 3300049573 Ga0501037_0034421 Ga0501037_0034421_1248_2372 373
129 3300049574 Ga0501038_0030204 Ga0501038_0030204_1044_2168 373
130 3300049579 Ga0501043_0182080 Ga0501043_0182080_380_1504 373
131 3300049742 Ga0501080_0213441 Ga0501080_0213441_507_1670 373
132 3300049822 Ga0501035_0042319 Ga0501035_0042319_1733_2857 373
133 3300049823 Ga0501044_0118998 Ga0501044_0118998_1271_2395 373
134 3300050491 nmdc:mga00v17_158065_c1 nmdc:mga00v17_158065_c1_147_1310 373
135 3300050493 nmdc:mga0k408_23612_c1 nmdc:mga0k408_23612_c1_1104_2240 373
136 3300050494 nmdc:mga06z11_56919_c1 nmdc:mga06z11_56919_c1_514_1677 373
137 3300050496 nmdc:mga07m45_8087_c1 nmdc:mga07m45_8087_c1_2884_4008 373
138 3300050516 nmdc:mga0sz30_740_c1 nmdc:mga0sz30_740_c1_9210_10334 373
139 3300053096 Ga0500641_0000477 Ga0500641_0000477_11091_12215 373
140 3300053733 Ga0500552_000149 Ga0500552_000149_1816_2940 373
141 iso_pu_bacteria 2848858292 2848862566 373
142 iso_pu_bacteria 2902330777 2902333410 373
143 iso_pu_bacteria 3003665799 3003667673 373
144 iso_pu_bacteria 8054563764 8054563945 373
145 3300005327 Ga0070658_10010901 Ga0070658_100109017 374
146 3300005336 Ga0070680_100013407 Ga0070680_1000134074 374
147 3300005530 Ga0070679_100044522 Ga0070679_1000445222 374
148 3300005563 Ga0068855_100131627 Ga0068855_1001316272 374
149 3300005614 Ga0068856_100098527 Ga0068856_1000985272 374
150 3300005937 Ga0081455_10080973 Ga0081455_100809733 374
151 3300009093 Ga0105240_10022508 Ga0105240_100225087 374
152 3300021388 Ga0213875_10040609 Ga0213875_100406092 374
153 3300025912 Ga0207707_10009870 Ga0207707_100098705 374
154 3300025913 Ga0207695_10057721 Ga0207695_100577212 374
155 3300025921 Ga0207652_10014692 Ga0207652_100146922 374
156 3300025949 Ga0207667_10033340 Ga0207667_100333405 374
157 3300025949 Ga0207667_10195346 Ga0207667_101953462 374
158 3300026078 Ga0207702_10083540 Ga0207702_100835402 374
159 3300037853 Ga0436364_1226977 Ga0436364_1226977_1621_2748 374
160 3300053153 Ga0500616_0066157 Ga0500616_0066157_652_1779 374
161 iso_pu_bacteria 2595698237 2596373298 374
162 iso_pu_bacteria 2889306138 2889307732 374
163 iso_pu_bacteria 2902405164 2902407001 374
164 iso_pu_bacteria 2928125067 2928127179 374
165 3300025912 Ga0207707_10054318 Ga0207707_100543183 375
166 3300025921 Ga0207652_10247954 Ga0207652_102479541 375
167 3300037418 Ga0395900_0374843 Ga0395900_0374843_150_1286 375
168 3300044735 Ga0466968_0013634 Ga0466968_0013634_776_1912 375
169 3300048924 Ga0496121_0005544 Ga0496121_0005544_1898_3040 375
170 3300053153 Ga0500616_0009579 Ga0500616_0009579_259_1389 375
171 iso_pu_bacteria 2841957949 2841965890 375
172 3300006931 Ga0097620_100260756 Ga0097620_1002607562 376
173 iso_pu_bacteria 2643221541 2643731091 376
174 iso_pu_bacteria 2643221606 2644044257 376
175 iso_pu_bacteria 2643221671 2644391819 376
176 iso_pu_bacteria 2824753945 2824761639 376
177 iso_pu_bacteria 2899275550 2899278892 376
178 3300005577 Ga0068857_100288342 Ga0068857_1002883421 377
179 3300025925 Ga0207650_10037417 Ga0207650_100374172 377
180 iso_pu_bacteria 2842775625 2842775977 377
181 3300005456 Ga0070678_100010931 Ga0070678_1000109315 378
182 3300005539 Ga0068853_100264684 Ga0068853_1002646841 378
183 3300014497 Ga0182008_10001013 Ga0182008_1000101312 378
184 3300015262 Ga0182007_10001065 Ga0182007_1000106513 378
185 3300024225 Ga0224572_1004123 Ga0224572_10041233 378
186 3300026121 Ga0207683_10021759 Ga0207683_100217595 378
187 3300045051 Ga0451576_0169095 Ga0451576_0169095_1020_2228 378
188 3300049579 Ga0501043_0010630 Ga0501043_0010630_4646_5806 378
189 3300049581 Ga0501047_0022294 Ga0501047_0022294_972_2132 378
190 3300049742 Ga0501080_0018891 Ga0501080_0018891_2010_3170 378
191 3300049823 Ga0501044_0020642 Ga0501044_0020642_4699_5859 378
192 iso_pu_bacteria 2928115317 2928119585 378
193 3300003659 JGI25404J52841_10000323 JGI25404J52841_100003235 379
194 3300005983 Ga0081540_1000293 Ga0081540_100029346 379
195 3300033442 Ga0315911_1000049 Ga0315911_100004910 379
196 3300037853 Ga0436364_0428458 Ga0436364_0428458_1527_2708 379
197 3300048903 Ga0496100_0130450 Ga0496100_0130450_190_1335 379
198 3300048917 Ga0496114_0089773 Ga0496114_0089773_717_1862 379
199 iso_pu_bacteria 2545555834 2545675039 379
200 iso_pu_bacteria 2846952575 2846955581 379
201 iso_pu_bacteria 641522639 641645365 379

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02515

CoA_transf_3

CoA-transferase family III

20

379

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5yiy-assembly1.cif.gz_B crystal structure of d175a mutant of rv3272 from mycobacterium tuberculosis 0.9056 2 367
4hl6-assembly2.cif.gz_C yfde from escherichia coli 0.9037 1 371
5yit-assembly3.cif.gz_E-2 crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.8996 2 365
5yx6-assembly2.cif.gz_C crystal structure of rv3272 from m. tuberculosis orthorhombic form 0.8993 1 367
5yit-assembly1.cif.gz_B crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.8985 1 367
ID Description Score Start End Superfamily
4hl6E02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9413 222 314 3.30.1540.10
af_Q68FU4_261_348_3.30.1540.10 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.94 224 312 3.30.1540.10
4ed9A02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9313 222 314 3.30.1540.10
4hl6E02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.922 222 314 3.30.1540.10
af_Q68FU4_261_348_3.30.1540.10 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9199 224 312 3.30.1540.10
ID Description Score Start End GO Terms
AF-A0A505DQC8-F1-model_v4 CoA transferase 0.9761 2 129 GO:0008410
AF-A0A3B9NNH8-F1-model_v4 CoA transferase 0.957 2 101 GO:0008410
AF-A0A7X3ZGD9-F1-model_v4 CoA transferase 0.9562 1 113 GO:0016740
AF-A0A3E0N714-F1-model_v4 CoA transferase 0.9552 1 127 GO:0008410
AF-A0A2E5MT80-F1-model_v4 Carnitine dehydratase 0.9488 1 371 GO:0008410

Feature Viewer

pLDDT pTM Quality
87.25 0.86 High
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Predicted Structure (AlphaFold2)

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