F309160

General Info

Members Datasets Scaffolds Average Seq Length
201 161 155 704

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221690|2644505158
Length 858
Sequence LASPTAGRAPDAARTVATHCPYCALQCGMELSVTPRPGQERPDVRLAPTDFPTNRGGLCAKGWSAADLLSHPDRLTSPLVRTVPGDRSSPLRPATWDEALDAVAEAVRATQRRYGRDAVGCFGGGGLTNEKAYLLGKFARTVLRTRSIDYNGRWCMSSAAAASTRSFGIDRGLPFPVADLALADVLLLVGANPAETMPPLMQHLEAGRERGAHHVVVDPRATATARTAHVHLQPRPGTDAALANGLLHLVVRRGWVDEEYVATRTVEFEAVRESVTGYWPDRVERITGVPAADLEAVAELLGTASTAMVITARGAEQHASGTATAQAFINLALALGLPGRPGSGYGTLTGQGNGQGGREHGQKADQLPGYRKITDLGDRAHVAGVWGVDPTRLPGPGVSATEMLRALGTPGGVRTLLLLASNVTVSAPDASTVTERVDALDFLMVADLFLSESAARADVVLPVAMWAEEEGTMTNLEGRVLRRRRALDPPVGVRTDLDVLAGVAERLGQGHLMTTDAGAAFDELGRASAGGVADYGGITYDRIEDEQGVFWPCTDATDPGTPRLFADRFAHPDGLARFTRAEYREPAERTDQEFPYVLTTGRLMRQYQSGTQTRRVAALAGDEVGPDGTVLPHAELHPDLARRCGVVDGEPVQLRTRRGVAVFRARLTTGIRTDTVFVPFHWSGESRANTLTHDALDPVSRMPAFKACAVAVDPIRTPSTPPAGTTTERTRAPWPPARPKGLALDSHPTFLQGVYALTGKGLAAPELLDPGLSYTVPDGSVAQTVYFRGGNSTDELVVVVLVRDGVPMRYFPIGAKGDVHVPLRVVEDLEPGTTLEVHAAGAAGVSGVLVIDLGLVEV

Samples

Sample ID Description Type Environment
1 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
2 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
3 2643221561 Nocardioides sp. Root151 Isolate Unclassified
4 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
5 2643221576 Nocardioides sp. Root614 Isolate Unclassified
6 2643221590 Nocardioides sp. Root682 Isolate Unclassified
7 2643221604 Nocardioides sp. Root190 Isolate Unclassified
8 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
9 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
10 2643221696 Nocardioides sp. Root140 Isolate Unclassified
11 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
12 2738541305 Nocardioides sp. CF167 Isolate Unclassified
13 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
14 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
15 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
16 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
17 2808606448 Streptomyces sp. 193411 Isolate Unclassified
18 2855683550 Micromonospora sp. RP3T Isolate Unclassified
19 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
20 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
21 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
22 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
23 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
24 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
25 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
26 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
27 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
28 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
29 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
30 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
31 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
32 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
33 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
34 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
35 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
36 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
37 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
38 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
39 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
40 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
41 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
42 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
43 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
44 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
45 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
46 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
47 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
48 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
49 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
50 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
51 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
52 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
53 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
54 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
55 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
56 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
57 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
58 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
59 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
60 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
61 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
62 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
63 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
64 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
72 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
73 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
76 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
99 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
100 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
101 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
102 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
103 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
107 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
108 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
109 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
110 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
111 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
112 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
113 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
114 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
115 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
116 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
119 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
120 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
121 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
122 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
123 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
137 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
140 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
141 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
142 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
143 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
151 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
152 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
153 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
154 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
155 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
156 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
159 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
160 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere
161 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.61
Metatranscriptomes 0
Isolates 22.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.49
Nodule 0
Rhizoplane 1
Rhizosphere 83.08
Stem 0
Stem Tuber 0
Unclassified 13.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24749J21850_1000092 3300002076 Bacteria 16095
2 JGI24751J29686_10000152 3300002459 Bacteria 33173
3 Ga0070670_100001223 3300005331 Bacteria 20447
4 Ga0070669_100000086 3300005353 Bacteria 90512
5 Ga0070667_100002457 3300005367 Bacteria 16180
6 Ga0070667_100006257 3300005367 Bacteria 9899
7 Ga0070672_100044744 3300005543 Bacteria 3421
8 Ga0070665_100060903 3300005548 Bacteria 3784
9 Ga0068855_100033550 3300005563 Bacteria 6125
10 Ga0070664_100040607 3300005564 Bacteria 3923
11 Ga0068857_100116379 3300005577 Bacteria 2405
12 Ga0068856_100005560 3300005614 Bacteria 12412
13 Ga0068856_100009817 3300005614 Bacteria 9297
14 Ga0068859_100013766 3300005617 Bacteria 8110
15 Ga0068864_100001360 3300005618 Bacteria 20316
16 Ga0068861_100000988 3300005719 Bacteria 17367
17 Ga0068863_100008131 3300005841 Bacteria 10241
18 Ga0068860_100002514 3300005843 Bacteria 19239
19 Ga0068862_100000063 3300005844 Bacteria 124662
20 Ga0068862_100001276 3300005844 Bacteria 23591
21 Ga0081455_10020331 3300005937 Bacteria 6256
22 Ga0081539_10004875 3300005985 Bacteria 14335
23 Ga0075428_100054512 3300006844 Bacteria 4382
24 Ga0075431_100000150 3300006847 Bacteria 47470
25 Ga0075431_100028258 3300006847 Bacteria 5760
26 Ga0075429_100036505 3300006880 Bacteria 4274
27 Ga0097620_100013764 3300006931 Bacteria 8110
28 Ga0105240_10000167 3300009093 Bacteria 133279
29 Ga0105240_10067023 3300009093 Bacteria 4451
30 Ga0105241_10015153 3300009174 Bacteria 5647
31 Ga0105248_10001142 3300009177 Bacteria 29580
32 Ga0105237_10028493 3300009545 Bacteria 5687
33 Ga0105238_10053429 3300009551 Bacteria 4059
34 Ga0105249_10000103 3300009553 Bacteria 118397
35 Ga0157373_10076477 3300013100 Bacteria 2362
36 Ga0157369_10022528 3300013105 Bacteria 7027
37 Ga0157374_10063587 3300013296 Bacteria 3461
38 Ga0157380_10000572 3300014326 Bacteria 22645
39 Ga0183367_1009 3300015688 Bacteria 484598
40 Ga0209784_100527 3300025224 Bacteria 14298
41 Ga0207710_10005944 3300025900 Bacteria 5234
42 Ga0207647_10001331 3300025904 Bacteria 18972
43 Ga0207695_10010913 3300025913 Bacteria 11051
44 Ga0207695_10024899 3300025913 Bacteria 6717
45 Ga0207671_10000914 3300025914 Bacteria 37261
46 Ga0207681_10000073 3300025923 Bacteria 90527
47 Ga0207694_10027139 3300025924 Bacteria 4360
48 Ga0207650_10000128 3300025925 Bacteria 94823
49 Ga0207711_10002585 3300025941 Bacteria 16101
50 Ga0207689_10013952 3300025942 Bacteria 6844
51 Ga0207667_10024909 3300025949 Bacteria 6559
52 Ga0207712_10000069 3300025961 Bacteria 127318
53 Ga0207640_10023725 3300025981 Bacteria 3691
54 Ga0207658_10001342 3300025986 Bacteria 19261
55 Ga0207658_10028204 3300025986 Bacteria 3952
56 Ga0207702_10004914 3300026078 Bacteria 11752
57 Ga0207702_10011150 3300026078 Bacteria 7499
58 Ga0207641_10001400 3300026088 Bacteria 23760
59 Ga0207676_10000447 3300026095 Bacteria 34953
60 Ga0207674_10056877 3300026116 Bacteria 3968
61 Ga0207675_100002325 3300026118 Bacteria 18858
62 Ga0207683_10091485 3300026121 Bacteria 2710
63 Ga0268265_10000055 3300028380 Bacteria 158947
64 Ga0268265_10000727 3300028380 Bacteria 32178
65 Ga0268264_10000381 3300028381 Bacteria 64651
66 Ga0307515_10007278 3300028794 Bacteria 21911
67 Ga0307515_10108005 3300028794 Bacteria 3283
68 Ga0265339_10003232 3300031249 Bacteria 11437
69 Ga0307513_10021273 3300031456 Bacteria 7660
70 Ga0307516_10038555 3300031730 Bacteria 4768
71 Ga0373933_0000888 3300035724 Bacteria 18292
72 Ga0395899_0010945 3300037312 Bacteria 6951
73 Ga0395901_0007393 3300038443 Bacteria 11083
74 Ga0395901_0064602 3300038443 Bacteria 3810
75 Ga0436365_1714070 3300039437 Bacteria 6473
76 Ga0436360_0433795 3300039438 Bacteria 9850
77 Ga0436360_1039915 3300039438 Bacteria 7559
78 Ga0436363_0696746 3300039450 Bacteria 3001
79 Ga0436362_1163083 3300039453 Bacteria 7074
80 Ga0466972_0027390 3300044658 Bacteria 2820
81 Ga0466965_0025163 3300044683 Bacteria 2881
82 Ga0466961_0006024 3300044693 Bacteria 7688
83 Ga0466961_0026734 3300044693 Bacteria 3711
84 Ga0466961_0027034 3300044693 Bacteria 3689
85 Ga0466963_0030451 3300044694 Bacteria 3483
86 Ga0466971_0011368 3300044719 Bacteria 3899
87 Ga0466970_0011677 3300044765 Bacteria 4480
88 Ga0466957_0005820 3300044842 Bacteria 6939
89 Ga0466959_0091683 3300045049 Bacteria 2182
90 Ga0466967_0223085 3300045976 Bacteria 1792
91 Ga0495651_0005676 3300046462 Bacteria 9508
92 Ga0495628_0040663 3300046516 Bacteria 3714
93 Ga0495652_0002563 3300046529 Bacteria 18615
94 Ga0496112_0007700 3300048915 Bacteria 9581
95 Ga0496114_0022108 3300048917 Bacteria 5181
96 Ga0501031_0000066 3300049568 Bacteria 56603
97 Ga0501031_0008082 3300049568 Bacteria 6851
98 Ga0501032_0000178 3300049569 Bacteria 52170
99 Ga0501033_0010691 3300049570 Bacteria 7034
100 Ga0501034_0005265 3300049571 Bacteria 14195
101 Ga0501034_0102025 3300049571 Bacteria 2862
102 Ga0501036_0000437 3300049572 Bacteria 29608
103 Ga0501036_0050767 3300049572 Bacteria 3512
104 Ga0501037_0000375 3300049573 Bacteria 37216
105 Ga0501037_0005529 3300049573 Bacteria 9220
106 Ga0501037_0007366 3300049573 Bacteria 8049
107 Ga0501037_0008645 3300049573 Bacteria 7467
108 Ga0501037_0050802 3300049573 Bacteria 3034
109 Ga0501038_0003684 3300049574 Bacteria 14270
110 Ga0501039_0000255 3300049575 Bacteria 38934
111 Ga0501041_0005724 3300049577 Bacteria 7262
112 Ga0501043_0003594 3300049579 Bacteria 12732
113 Ga0501043_0017829 3300049579 Bacteria 5566
114 Ga0501043_0035262 3300049579 Bacteria 3934
115 Ga0501043_0044954 3300049579 Bacteria 3473
116 Ga0501046_0001623 3300049580 Bacteria 21521
117 Ga0501046_0019854 3300049580 Bacteria 5565
118 Ga0501046_0046595 3300049580 Bacteria 3440
119 Ga0501047_0003296 3300049581 Bacteria 15295
120 Ga0501047_0005640 3300049581 Bacteria 11794
121 Ga0501047_0119506 3300049581 Bacteria 2517
122 Ga0501048_0000586 3300049582 Bacteria 25837
123 Ga0501048_0021229 3300049582 Bacteria 4754
124 Ga0501048_0029920 3300049582 Bacteria 3944
125 Ga0501068_0005194 3300049584 Bacteria 7102
126 Ga0501069_0000399 3300049585 Bacteria 19614
127 Ga0501070_0003877 3300049586 Bacteria 12904
128 Ga0501070_0008580 3300049586 Bacteria 8641
129 Ga0501073_0008430 3300049589 Bacteria 7645
130 Ga0501074_0000752 3300049590 Bacteria 20376
131 Ga0501074_0003824 3300049590 Bacteria 10713
132 Ga0501075_0014481 3300049591 Bacteria 5651
133 Ga0501076_0018405 3300049592 Bacteria 5325
134 Ga0501077_0009009 3300049593 Bacteria 6195
135 Ga0501077_0014796 3300049593 Bacteria 4903
136 Ga0501080_0001421 3300049742 Bacteria 20088
137 Ga0501080_0055793 3300049742 Bacteria 3679
138 Ga0501080_0082496 3300049742 Bacteria 2986
139 Ga0501081_0009040 3300049743 Bacteria 6477
140 Ga0501035_0021038 3300049822 Bacteria 5996
141 Ga0501035_0021652 3300049822 Bacteria 5911
142 Ga0501035_0058849 3300049822 Bacteria 3422
143 Ga0501035_0112806 3300049822 Bacteria 2381
144 Ga0501044_0001897 3300049823 Bacteria 24185
145 Ga0501044_0039180 3300049823 Bacteria 4944
146 Ga0501045_0007136 3300049824 Bacteria 7751
147 nmdc:mga05p37_69596_c1 3300050507 Bacteria 4329
148 nmdc:mga0qj67_46633_c1 3300050509 Bacteria 3422
149 nmdc:mga06r32_174_c1 3300050510 Bacteria 49983
150 Ga0500646_0001188 3300053090 Bacteria 6995
151 Ga0500595_000645 3300053119 Bacteria 20949
152 Ga0500614_000052 3300053123 Bacteria 24737
153 Ga0500559_0001825 3300053136 Bacteria 11621
154 Ga0501084_0000248 3300054114 Bacteria 40872
155 Ga0501082_0012767 3300060353 Bacteria 7218

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045976 Ga0466967_0223085 Ga0466967_0223085_46_1776 562
2 iso_pu_bacteria 2883821847 2883821929 663
3 3300009174 Ga0105241_10015153 Ga0105241_100151533 664
4 3300026121 Ga0207683_10091485 Ga0207683_100914852 668
5 3300025942 Ga0207689_10013952 Ga0207689_100139523 669
6 3300009553 Ga0105249_10000103 Ga0105249_10000103105 670
7 3300049573 Ga0501037_0007366 Ga0501037_0007366_1054_3123 670
8 3300049579 Ga0501043_0035262 Ga0501043_0035262_803_2872 670
9 3300049580 Ga0501046_0046595 Ga0501046_0046595_989_3058 670
10 3300049581 Ga0501047_0119506 Ga0501047_0119506_193_2262 670
11 3300049582 Ga0501048_0029920 Ga0501048_0029920_804_2873 670
12 3300049822 Ga0501035_0058849 Ga0501035_0058849_1081_3150 670
13 3300049823 Ga0501044_0039180 Ga0501044_0039180_323_2392 670
14 iso_pu_bacteria 2891554331 2891557067 670
15 3300044658 Ga0466972_0027390 Ga0466972_0027390_747_2804 671
16 3300046462 Ga0495651_0005676 Ga0495651_0005676_7250_9331 671
17 3300046516 Ga0495628_0040663 Ga0495628_0040663_585_2666 671
18 3300046529 Ga0495652_0002563 Ga0495652_0002563_13339_15420 671
19 3300049571 Ga0501034_0102025 Ga0501034_0102025_36_2135 672
20 3300049572 Ga0501036_0050767 Ga0501036_0050767_1106_3205 672
21 3300049579 Ga0501043_0017829 Ga0501043_0017829_1912_4011 672
22 3300049590 Ga0501074_0003824 Ga0501074_0003824_690_2789 672
23 3300049822 Ga0501035_0112806 Ga0501035_0112806_253_2352 672
24 3300048917 Ga0496114_0022108 Ga0496114_0022108_1920_4442 673
25 3300025224 Ga0209784_100527 Ga0209784_10052710 674
26 3300035724 Ga0373933_0000888 Ga0373933_0000888_4279_6342 674
27 3300048915 Ga0496112_0007700 Ga0496112_0007700_2620_4644 674
28 3300049573 Ga0501037_0050802 Ga0501037_0050802_672_2708 677
29 3300005563 Ga0068855_100033550 Ga0068855_1000335502 678
30 3300005564 Ga0070664_100040607 Ga0070664_1000406072 678
31 3300005614 Ga0068856_100009817 Ga0068856_1000098173 678
32 3300013100 Ga0157373_10076477 Ga0157373_100764772 678
33 3300013105 Ga0157369_10022528 Ga0157369_100225287 678
34 3300013296 Ga0157374_10063587 Ga0157374_100635872 678
35 3300026078 Ga0207702_10011150 Ga0207702_100111504 678
36 3300044683 Ga0466965_0025163 Ga0466965_0025163_301_2370 678
37 iso_pu_bacteria 2643221604 2644034838 679
38 3300006847 Ga0075431_100028258 Ga0075431_1000282582 680
39 3300028794 Ga0307515_10108005 Ga0307515_101080051 680
40 3300031456 Ga0307513_10021273 Ga0307513_100212736 680
41 iso_pu_bacteria 2643221561 2643824366 681
42 iso_pu_bacteria 2643221696 2644534742 681
43 3300039453 Ga0436362_1163083 Ga0436362_1163083_4995_7049 682
44 3300044719 Ga0466971_0011368 Ga0466971_0011368_373_2424 682
45 3300005985 Ga0081539_10004875 Ga0081539_100048757 683
46 3300015688 Ga0183367_1009 Ga0183367_100980 683
47 3300044693 Ga0466961_0006024 Ga0466961_0006024_1645_3699 683
48 3300044842 Ga0466957_0005820 Ga0466957_0005820_2015_4069 683
49 iso_pu_bacteria 2862281513 2862288295 683
50 3300005548 Ga0070665_100060903 Ga0070665_1000609032 684
51 3300009093 Ga0105240_10067023 Ga0105240_100670232 684
52 3300009545 Ga0105237_10028493 Ga0105237_100284932 684
53 3300009551 Ga0105238_10053429 Ga0105238_100534292 684
54 3300025904 Ga0207647_10001331 Ga0207647_100013312 684
55 3300025913 Ga0207695_10010913 Ga0207695_100109132 684
56 3300025914 Ga0207671_10000914 Ga0207671_1000091430 684
57 3300025924 Ga0207694_10027139 Ga0207694_100271392 684
58 3300025949 Ga0207667_10024909 Ga0207667_100249093 684
59 3300025981 Ga0207640_10023725 Ga0207640_100237252 684
60 3300038443 Ga0395901_0064602 Ga0395901_0064602_1134_3191 684
61 iso_pu_bacteria 2863067949 2863073736 684
62 iso_pu_bacteria 2954002825 2954003856 684
63 iso_pu_bacteria 8056207758 8056214221 684
64 iso_pu_bacteria 2582581313 2585304992 685
65 iso_pu_bacteria 2643221576 2643892580 685
66 iso_pu_bacteria 2643221590 2643962029 685
67 iso_pu_bacteria 2738541305 2738872196 685
68 iso_pu_bacteria 2954711539 2954717169 685
69 iso_pu_bacteria 2954731030 2954734664 685
70 iso_pu_bacteria 2954749733 2954753551 685
71 iso_pu_bacteria 2954759201 2954765011 685
72 3300049568 Ga0501031_0000066 Ga0501031_0000066_43984_46077 686
73 3300049569 Ga0501032_0000178 Ga0501032_0000178_35701_37794 686
74 3300049570 Ga0501033_0010691 Ga0501033_0010691_1275_3368 686
75 3300049571 Ga0501034_0005265 Ga0501034_0005265_50_2143 686
76 3300049572 Ga0501036_0000437 Ga0501036_0000437_10356_12449 686
77 3300049573 Ga0501037_0000375 Ga0501037_0000375_34176_36269 686
78 3300049574 Ga0501038_0003684 Ga0501038_0003684_8563_10656 686
79 3300049575 Ga0501039_0000255 Ga0501039_0000255_3092_5185 686
80 3300049579 Ga0501043_0003594 Ga0501043_0003594_7074_9167 686
81 3300049580 Ga0501046_0001623 Ga0501046_0001623_2130_4223 686
82 3300049581 Ga0501047_0003296 Ga0501047_0003296_3550_5643 686
83 3300049582 Ga0501048_0000586 Ga0501048_0000586_10357_12450 686
84 3300049585 Ga0501069_0000399 Ga0501069_0000399_271_2364 686
85 3300049586 Ga0501070_0003877 Ga0501070_0003877_8547_10640 686
86 3300049589 Ga0501073_0008430 Ga0501073_0008430_3340_5433 686
87 3300049590 Ga0501074_0000752 Ga0501074_0000752_17162_19255 686
88 3300049742 Ga0501080_0001421 Ga0501080_0001421_6898_8991 686
89 3300049822 Ga0501035_0021652 Ga0501035_0021652_3745_5838 686
90 3300049823 Ga0501044_0001897 Ga0501044_0001897_21010_23103 686
91 3300054114 Ga0501084_0000248 Ga0501084_0000248_25261_27354 686
92 iso_pu_bacteria 2795385472 2795796049 686
93 3300005577 Ga0068857_100116379 Ga0068857_1001163792 687
94 3300026116 Ga0207674_10056877 Ga0207674_100568772 687
95 3300049573 Ga0501037_0005529 Ga0501037_0005529_5603_7720 687
96 3300049581 Ga0501047_0005640 Ga0501047_0005640_233_2350 687
97 3300006844 Ga0075428_100054512 Ga0075428_1000545122 688
98 3300006880 Ga0075429_100036505 Ga0075429_1000365053 688
99 3300025913 Ga0207695_10024899 Ga0207695_100248993 688
100 3300028794 Ga0307515_10007278 Ga0307515_100072787 688
101 3300031249 Ga0265339_10003232 Ga0265339_100032327 688
102 3300044694 Ga0466963_0030451 Ga0466963_0030451_146_2215 688
103 3300045049 Ga0466959_0091683 Ga0466959_0091683_83_2152 688
104 3300050507 nmdc:mga05p37_69596_c1 nmdc:mga05p37_69596_c1_1984_4050 688
105 3300050509 nmdc:mga0qj67_46633_c1 nmdc:mga0qj67_46633_c1_1080_3146 688
106 3300053090 Ga0500646_0001188 Ga0500646_0001188_1278_3344 688
107 3300005841 Ga0068863_100008131 Ga0068863_1000081313 689
108 3300005843 Ga0068860_100002514 Ga0068860_10000251413 689
109 3300005844 Ga0068862_100000063 Ga0068862_10000006319 689
110 3300025900 Ga0207710_10005944 Ga0207710_100059443 689
111 3300025961 Ga0207712_10000069 Ga0207712_10000069107 689
112 3300026088 Ga0207641_10001400 Ga0207641_1000140010 689
113 3300028380 Ga0268265_10000055 Ga0268265_10000055141 689
114 3300028381 Ga0268264_10000381 Ga0268264_1000038141 689
115 iso_pu_bacteria 2932398195 2932398209 689
116 iso_pu_bacteria 3002998708 3003004146 689
117 3300044693 Ga0466961_0026734 Ga0466961_0026734_1517_3610 691
118 3300044765 Ga0466970_0011677 Ga0466970_0011677_2034_4127 691
119 iso_pu_bacteria 2862178590 2862182625 691
120 3300044693 Ga0466961_0027034 Ga0466961_0027034_1090_3168 692
121 iso_pu_bacteria 2808606448 2809231319 692
122 iso_pu_bacteria 2855683550 2855684570 692
123 iso_pu_bacteria 2980182181 2980187872 692
124 3300005367 Ga0070667_100006257 Ga0070667_1000062571 693
125 3300025986 Ga0207658_10028204 Ga0207658_100282042 693
126 iso_pu_bacteria 2738543005 2739203059 693
127 iso_pu_bacteria 2888578766 2888582326 693
128 iso_pu_bacteria 2928142448 2928142711 693
129 3300005614 Ga0068856_100005560 Ga0068856_1000055606 694
130 3300006847 Ga0075431_100000150 Ga0075431_10000015028 694
131 3300026078 Ga0207702_10004914 Ga0207702_100049144 694
132 3300050510 nmdc:mga06r32_174_c1 nmdc:mga06r32_174_c1_9722_11824 694
133 iso_pu_bacteria 8003856774 8003862582 694
134 iso_pu_bacteria 2512564039 2512735473 695
135 iso_pu_bacteria 2864997549 2865002542 695
136 iso_pu_bacteria 2889295896 2889300696 695
137 iso_pu_bacteria 2964326757 2964329256 695
138 iso_pu_bacteria 2981284811 2981287385 695
139 iso_pu_bacteria 2981289755 2981292581 695
140 iso_pu_bacteria 2981980479 2981983200 695
141 iso_pu_bacteria 2981985349 2981988114 695
142 3300039438 Ga0436360_0433795 Ga0436360_0433795_2573_4672 697
143 3300005937 Ga0081455_10020331 Ga0081455_100203314 698
144 iso_pu_bacteria 2643221567 2643853564 699
145 iso_pu_bacteria 2643221624 2644137532 699
146 iso_pu_bacteria 8056447290 8056449951 699
147 3300005543 Ga0070672_100044744 Ga0070672_1000447443 702
148 3300009093 Ga0105240_10000167 Ga0105240_1000016735 702
149 3300031730 Ga0307516_10038555 Ga0307516_100385552 704
150 3300039437 Ga0436365_1714070 Ga0436365_1714070_275_2407 705
151 3300039450 Ga0436363_0696746 Ga0436363_0696746_347_2479 705
152 3300053119 Ga0500595_000645 Ga0500595_000645_14745_16877 705
153 3300053123 Ga0500614_000052 Ga0500614_000052_7820_9952 705
154 3300053136 Ga0500559_0001825 Ga0500559_0001825_6637_8769 705
155 3300037312 Ga0395899_0010945 Ga0395899_0010945_4013_6220 706
156 3300038443 Ga0395901_0007393 Ga0395901_0007393_8769_10976 706
157 3300049568 Ga0501031_0008082 Ga0501031_0008082_3607_5886 706
158 3300049573 Ga0501037_0008645 Ga0501037_0008645_3124_5403 706
159 3300049577 Ga0501041_0005724 Ga0501041_0005724_2275_4566 706
160 3300049579 Ga0501043_0044954 Ga0501043_0044954_1127_3418 706
161 3300049580 Ga0501046_0019854 Ga0501046_0019854_1001_3292 706
162 3300049582 Ga0501048_0021229 Ga0501048_0021229_1122_3413 706
163 3300049584 Ga0501068_0005194 Ga0501068_0005194_4762_7041 706
164 3300049586 Ga0501070_0008580 Ga0501070_0008580_2522_4801 706
165 3300049591 Ga0501075_0014481 Ga0501075_0014481_1084_3375 706
166 3300049592 Ga0501076_0018405 Ga0501076_0018405_1212_3503 706
167 3300049593 Ga0501077_0009009 Ga0501077_0009009_3855_6134 706
168 3300049593 Ga0501077_0014796 Ga0501077_0014796_963_3254 706
169 3300049742 Ga0501080_0055793 Ga0501080_0055793_546_2825 706
170 3300049742 Ga0501080_0082496 Ga0501080_0082496_71_2362 706
171 3300049743 Ga0501081_0009040 Ga0501081_0009040_560_2839 706
172 3300049822 Ga0501035_0021038 Ga0501035_0021038_389_2668 706
173 3300049824 Ga0501045_0007136 Ga0501045_0007136_2272_4551 706
174 3300060353 Ga0501082_0012767 Ga0501082_0012767_2370_4661 706
175 iso_pu_bacteria 2728369359 2730135497 706
176 iso_pu_bacteria 2904595352 2904598436 706
177 iso_pu_bacteria 648028048 648170902 706
178 iso_pu_bacteria 2751185725 2753035561 707
179 iso_pu_bacteria 2751185792 2753326413 707
180 iso_pu_bacteria 2643221690 2644505158 708
181 3300039438 Ga0436360_1039915 Ga0436360_1039915_3783_6002 710
182 3300002076 JGI24749J21850_1000092 JGI24749J21850_10000929 714
183 3300002459 JGI24751J29686_10000152 JGI24751J29686_1000015227 714
184 3300005331 Ga0070670_100001223 Ga0070670_1000012239 714
185 3300005353 Ga0070669_100000086 Ga0070669_10000008616 714
186 3300005367 Ga0070667_100002457 Ga0070667_1000024576 714
187 3300005617 Ga0068859_100013766 Ga0068859_1000137663 714
188 3300005618 Ga0068864_100001360 Ga0068864_1000013609 714
189 3300005719 Ga0068861_100000988 Ga0068861_10000098812 714
190 3300005844 Ga0068862_100001276 Ga0068862_10000127612 714
191 3300006931 Ga0097620_100013764 Ga0097620_1000137643 714
192 3300009177 Ga0105248_10001142 Ga0105248_1000114213 714
193 3300009177 Ga0105248_10001142 Ga0105248_100011428 714
194 3300014326 Ga0157380_10000572 Ga0157380_100005729 714
195 3300025923 Ga0207681_10000073 Ga0207681_1000007370 714
196 3300025925 Ga0207650_10000128 Ga0207650_1000012823 714
197 3300025941 Ga0207711_10002585 Ga0207711_100025854 714
198 3300025986 Ga0207658_10001342 Ga0207658_1000134212 714
199 3300026095 Ga0207676_10000447 Ga0207676_1000044710 714
200 3300026118 Ga0207675_100002325 Ga0207675_1000023259 714
201 3300028380 Ga0268265_10000727 Ga0268265_1000072710 714

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00384

Molybdopterin

Molybdopterin oxidoreductase

74

506

0.93

PF01568

Molydop_binding

Molydopterin dinucleotide binding domain

596

709

0.92

PF04879

Molybdop_Fe4S4

Molybdopterin oxidoreductase Fe4S4 domain

13

71

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
2nap-assembly1.cif.gz_A dissimilatory nitrate reductase (nap) from desulfovibrio desulfuricans 0.9537 13 704
2jiq-assembly1.cif.gz_A a new catalytic mechanism of periplasmic nitrate reductase from desulfovibrio desulfuricans atcc 27774 from crystallographic and epr data and based on detailed analysis of the sixth ligand 0.9514 13 704
1fdi-assembly1.cif.gz_A oxidized form of formate dehydrogenase h from e. coli complexed with the inhibitor nitrite 0.9466 15 705
8j83-assembly1.cif.gz_A crystal structure of formate dehydrogenase from methylorubrum extorquens am1 0.9414 13 704
7bkb-assembly1.cif.gz_D formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure) 0.9402 10 580
ID Description Score Start End Superfamily
2iv2X03 Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 0.9614 162 340 3.40.228.10
2v45A03 Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 0.9555 147 342 3.40.228.10
2e7zA03 Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 0.9481 175 328 3.40.228.10
1kqgA03 Alpha Beta;3-Layer(aba) Sandwich;Dimethylsulfoxide Reductase; domain 2;Dimethylsulfoxide Reductase, domain 2 0.9467 147 340 3.40.228.10
af_Q2FVV9_812_944_2.40.40.20 Mainly Beta;Beta Barrel;Barwin-like endoglucanases; 0.9434 583 701 2.40.40.20
ID Description Score Start End GO Terms
AF-A0A825DWD5-F1-model_v4 deleted 0.9845 175 340
AF-A0A7X6EKD1-F1-model_v4 deleted 0.9845 366 492
AF-A0A356IEU3-F1-model_v4 Formate dehydrogenase 0.9814 149 317 GO:0003954
GO:0016020
GO:0022904
AF-A0A661JRS9-F1-model_v4 Formate dehydrogenase subunit alpha 0.9814 169 313 GO:0016491
AF-A0A136PZ37-F1-model_v4 Molybdopterin dinucleotide-binding domain-containing protein 0.9808 506 704 GO:0003954
GO:0016020
GO:0022904
GO:0043546

Feature Viewer

pLDDT pTM Quality
91.77 0.92 High
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Predicted Structure (AlphaFold2)

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