F308722

General Info

Members Datasets Scaffolds Average Seq Length
201 128 201 285

Family's Representative Sequence

Representative Sequence 3300033180|Ga0307510_10154877|Ga0307510_101548772
Length 315
Sequence MEKQTIIVTGANGQLGKELQAATGAHRATGRPISFSNRTYTFTDWLPSDEEHRLYPFQFLFLTKEDLPIQDAAQTLQLFEKIRPAYCINCAAYTAVDKAETEKDQAFTINGDAPGILAAACQRVKARLIHISTDYVFDGESATPLKEDDPTGPISIYGASKLKGEQLARQQNEDTVILRTSWVYSEFGNNFVKTMIRLMREKDRISVVDDQIGSPTYAADLAAAILHIIARNKFVPGIYHYSNEGQISWYEFALAIKELTASPCTVAPISTAQYPTPARRPHYSLLDKSLIKATYGIAIPQWRESLVRCLARVSM

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
45 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
62 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
63 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
64 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
65 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
66 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
67 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
68 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
69 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
70 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
71 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
72 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
73 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
74 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
75 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
76 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
77 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
78 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
79 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
80 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
81 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
82 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
83 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
84 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
85 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
86 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
87 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
91 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
92 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
93 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
94 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
95 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
96 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
97 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
98 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
99 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
100 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
102 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
103 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
104 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
105 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
106 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
107 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
108 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
109 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
110 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
111 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
112 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
113 3300049681 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_B_3_drought Metagenome Rhizosphere
114 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
115 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
116 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
117 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
118 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
119 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
120 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
121 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
122 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
123 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
124 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
125 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
126 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
127 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
128 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.99
Nodule 0
Rhizoplane 0
Rhizosphere 89.55
Stem 0
Stem Tuber 0
Unclassified 7.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10003167 3300003316 Bacteria 4648
2 rootH2_10016488 3300003320 Bacteria 11354
3 rootH2_10027428 3300003320 Bacteria 8394
4 rootH2_10067129 3300003320 Bacteria 28673
5 rootL2_10137756 3300003322 Bacteria 3223
6 rootL2_10179914 3300003322 Bacteria 5429
7 rootH1_10244603 3300003323 Unclassified 2720
8 JGI25160J50197_1001403 3300003354 Bacteria 12081
9 Ga0065712_10106363 3300005290 Unclassified 1919
10 Ga0070683_100001127 3300005329 Bacteria 20202
11 Ga0070670_100015444 3300005331 Bacteria 6559
12 Ga0070670_100030034 3300005331 Bacteria 4680
13 Ga0070666_10156784 3300005335 Unclassified 1590
14 Ga0070680_100000574 3300005336 Bacteria 25244
15 Ga0070682_100056703 3300005337 Bacteria 2465
16 Ga0070691_10001559 3300005341 Bacteria 9882
17 Ga0070691_10020644 3300005341 Bacteria 3045
18 Ga0070674_100381568 3300005356 Bacteria 1147
19 Ga0070667_100184477 3300005367 Unclassified 1846
20 Ga0070681_10009703 3300005458 Bacteria 9472
21 Ga0070681_10156641 3300005458 Bacteria 2202
22 Ga0070679_100051077 3300005530 Bacteria 4118
23 Ga0070684_100006500 3300005535 Bacteria 9050
24 Ga0068853_100012841 3300005539 Bacteria 6824
25 Ga0070665_100000008 3300005548 Bacteria 606341
26 Ga0068855_100001250 3300005563 Bacteria 31562
27 Ga0068855_100008453 3300005563 Bacteria 12448
28 Ga0068855_100015945 3300005563 Bacteria 9037
29 Ga0068855_100249987 3300005563 Bacteria 1978
30 Ga0068857_100026099 3300005577 Bacteria 5146
31 Ga0068854_100014398 3300005578 Bacteria 5214
32 Ga0068856_100034891 3300005614 Bacteria 4929
33 Ga0068852_100000180 3300005616 Bacteria 43078
34 Ga0068860_100000029 3300005843 Bacteria 259192
35 Ga0068860_100033268 3300005843 Bacteria 4948
36 Ga0081540_1040093 3300005983 Bacteria 2445
37 Ga0097621_100025419 3300006237 Bacteria 4633
38 Ga0068871_100010352 3300006358 Bacteria 6800
39 Ga0105240_10001800 3300009093 Bacteria 36076
40 Ga0105240_10003960 3300009093 Bacteria 22876
41 Ga0105240_10003982 3300009093 Bacteria 22790
42 Ga0105240_10004688 3300009093 Bacteria 20675
43 Ga0105240_10008284 3300009093 Bacteria 14881
44 Ga0105240_10014136 3300009093 Bacteria 10906
45 Ga0105240_10092893 3300009093 Bacteria 3683
46 Ga0105240_10138848 3300009093 Bacteria 2908
47 Ga0105241_10000206 3300009174 Bacteria 44346
48 Ga0105241_10001098 3300009174 Bacteria 20609
49 Ga0105241_10072266 3300009174 Bacteria 2680
50 Ga0105237_10005211 3300009545 Bacteria 14705
51 Ga0105237_10007437 3300009545 Bacteria 11985
52 Ga0105237_10017445 3300009545 Bacteria 7441
53 Ga0105237_10017874 3300009545 Bacteria 7350
54 Ga0105237_10028017 3300009545 Bacteria 5740
55 Ga0105238_10003171 3300009551 Bacteria 16392
56 Ga0105238_10004388 3300009551 Bacteria 13992
57 Ga0105238_10144777 3300009551 Unclassified 2353
58 Ga0105239_10000135 3300010375 Bacteria 103223
59 Ga0105239_10000337 3300010375 Bacteria 68698
60 Ga0105239_10011811 3300010375 Bacteria 9746
61 Ga0105239_10149057 3300010375 Bacteria 2610
62 Ga0105239_10287471 3300010375 Bacteria 1851
63 Ga0157370_10013436 3300013104 Bacteria 8434
64 Ga0157370_10021996 3300013104 Bacteria 6350
65 Ga0157369_10098604 3300013105 Bacteria 3115
66 Ga0157374_10000009 3300013296 Bacteria 564330
67 Ga0157378_10296221 3300013297 Bacteria 1564
68 Ga0163162_10000423 3300013306 Bacteria 39010
69 Ga0163162_10052327 3300013306 Bacteria 4101
70 Ga0157372_10000258 3300013307 Bacteria 58520
71 Ga0157372_10063136 3300013307 Bacteria 4152
72 Ga0157372_10122894 3300013307 Bacteria 2983
73 Ga0157372_10369120 3300013307 Bacteria 1672
74 Ga0163163_10107407 3300014325 Bacteria 2818
75 Ga0157380_10834416 3300014326 Bacteria 942
76 Ga0157379_10177510 3300014968 Bacteria 1924
77 Ga0157376_10001803 3300014969 Bacteria 14251
78 Ga0207426_1000002 3300025302 Bacteria 1249660
79 Ga0207680_10005457 3300025903 Bacteria 6075
80 Ga0207647_10015814 3300025904 Bacteria 5164
81 Ga0207654_10000842 3300025911 Bacteria 16890
82 Ga0207654_10001504 3300025911 Bacteria 12290
83 Ga0207707_10000111 3300025912 Bacteria 82165
84 Ga0207695_10000051 3300025913 Bacteria 399641
85 Ga0207695_10000445 3300025913 Bacteria 90509
86 Ga0207695_10003216 3300025913 Bacteria 23250
87 Ga0207695_10003973 3300025913 Bacteria 20423
88 Ga0207695_10004873 3300025913 Bacteria 18099
89 Ga0207695_10221297 3300025913 Bacteria 1800
90 Ga0207671_10038218 3300025914 Bacteria 3557
91 Ga0207671_10049931 3300025914 Bacteria 3098
92 Ga0207660_10001012 3300025917 Bacteria 18631
93 Ga0207652_10000538 3300025921 Bacteria 38475
94 Ga0207694_10006924 3300025924 Bacteria 8606
95 Ga0207661_10017559 3300025944 Bacteria 5298
96 Ga0207667_10000100 3300025949 Bacteria 138482
97 Ga0207667_10004308 3300025949 Bacteria 17437
98 Ga0207667_10013076 3300025949 Bacteria 9526
99 Ga0207667_10020373 3300025949 Bacteria 7377
100 Ga0207658_10161431 3300025986 Unclassified 1837
101 Ga0207674_10003443 3300026116 Bacteria 19359
102 Ga0207698_10000108 3300026142 Bacteria 51893
103 Ga0207698_10325877 3300026142 Bacteria 1441
104 Ga0268266_10000016 3300028379 Bacteria 629101
105 Ga0268264_10000072 3300028381 Bacteria 260791
106 Ga0268264_10007515 3300028381 Bacteria 9093
107 Ga0307517_10000697 3300028786 Bacteria 57970
108 Ga0307515_10000078 3300028794 Bacteria 227988
109 Ga0307511_10001896 3300030521 Bacteria 21954
110 Ga0307509_10089870 3300031507 Bacteria 3148
111 Ga0307508_10237616 3300031616 Bacteria 1420
112 Ga0316576_10096312 3300031727 Bacteria 2209
113 Ga0307516_10005649 3300031730 Bacteria 14870
114 Ga0307413_10495543 3300031824 Bacteria 980
115 Ga0307414_10291865 3300032004 Bacteria 1375
116 Ga0307510_10001712 3300033180 Bacteria 24371
117 Ga0307510_10154877 3300033180 Bacteria 1901
118 Ga0316574_0123314 3300035398 Unclassified 1665
119 Ga0373937_0049079 3300036401 Bacteria 3866
120 Ga0373937_0357704 3300036401 Unclassified 1383
121 Ga0373937_0553578 3300036401 Bacteria 1093
122 Ga0451577_0000043 3300042876 Bacteria 329533
123 Ga0451577_0220331 3300042876 Bacteria 1715
124 Ga0451577_0607502 3300042876 Bacteria 992
125 Ga0466972_0021694 3300044658 Bacteria 3201
126 Ga0453683_0000023 3300044673 Bacteria 264522
127 Ga0453683_0000055 3300044673 Bacteria 192588
128 Ga0453683_0006907 3300044673 Bacteria 7740
129 Ga0453683_0019903 3300044673 Bacteria 4294
130 Ga0453683_0025379 3300044673 Bacteria 3767
131 Ga0453683_0136232 3300044673 Bacteria 1548
132 Ga0453684_0000133 3300044712 Bacteria 329529
133 Ga0453684_0018496 3300044712 Bacteria 10689
134 Ga0453684_0028287 3300044712 Bacteria 8007
135 Ga0453684_0096188 3300044712 Bacteria 3639
136 Ga0453684_0107614 3300044712 Bacteria 3394
137 Ga0453684_0144166 3300044712 Bacteria 2840
138 Ga0453684_0196170 3300044712 Bacteria 2357
139 Ga0453684_0712653 3300044712 Unclassified 1089
140 Ga0466971_0105787 3300044719 Bacteria 1296
141 Ga0466970_0137444 3300044765 Bacteria 1345
142 Ga0466959_0014299 3300045049 Bacteria 5761
143 Ga0451576_0000365 3300045051 Bacteria 108399
144 Ga0451576_0004054 3300045051 Bacteria 19417
145 Ga0451576_0097801 3300045051 Unclassified 3052
146 Ga0451576_0172394 3300045051 Bacteria 2258
147 Ga0451576_0173237 3300045051 Bacteria 2252
148 Ga0451576_0193031 3300045051 Bacteria 2127
149 Ga0451576_0249095 3300045051 Bacteria 1856
150 Ga0451576_0256857 3300045051 Unclassified 1826
151 Ga0466958_0138713 3300045836 Bacteria 1530
152 Ga0495629_0029428 3300046459 Bacteria 3895
153 Ga0495638_0069082 3300046460 Bacteria 2165
154 Ga0495651_0370442 3300046462 Bacteria 942
155 Ga0495606_0006481 3300046507 Bacteria 10773
156 Ga0495630_0137454 3300046517 Bacteria 1857
157 Ga0495648_0003626 3300046524 Bacteria 13516
158 Ga0495587_0131254 3300046536 Unclassified 1432
159 Ga0495645_0161696 3300046543 Unclassified 1548
160 Ga0495611_0000011 3300046648 Bacteria 146643
161 Ga0495611_0154016 3300046648 Bacteria 1073
162 Ga0495625_0047380 3300046660 Bacteria 3099
163 Ga0495649_0104737 3300046694 Bacteria 1502
164 Ga0495581_0037801 3300047315 Bacteria 2794
165 Ga0495674_0022982 3300047319 Bacteria 5745
166 Ga0495687_000004 3300047443 Bacteria 779298
167 Ga0495684_0168065 3300047471 Unclassified 1633
168 Ga0495686_0000165 3300047472 Bacteria 125611
169 Ga0501297_002605 3300049520 Bacteria 1752
170 Ga0501298_003240 3300049521 Bacteria 2518
171 Ga0501043_0247086 3300049579 Bacteria 1375
172 Ga0501198_003071 3300049649 Bacteria 2272
173 Ga0501201_001671 3300049651 Bacteria 2063
174 Ga0501202_000050 3300049652 Bacteria 12265
175 Ga0501206_000760 3300049653 Bacteria 3935
176 Ga0501207_002015 3300049654 Bacteria 2603
177 Ga0501217_000079 3300049661 Bacteria 11818
178 Ga0501217_056676 3300049661 Bacteria 1037
179 Ga0501222_002345 3300049662 Bacteria 2628
180 Ga0501223_000157 3300049663 Bacteria 17995
181 Ga0501224_008880 3300049664 Bacteria 1467
182 Ga0501233_001909 3300049668 Bacteria 3624
183 Ga0501235_000643 3300049669 Bacteria 7040
184 Ga0501240_001698 3300049673 Bacteria 2202
185 Ga0501251_002648 3300049681 Bacteria 1748
186 Ga0501252_000296 3300049682 Bacteria 3536
187 Ga0501253_003902 3300049683 Bacteria 1836
188 Ga0501257_012047 3300049686 Bacteria 1976
189 Ga0501259_001770 3300049688 Bacteria 3578
190 Ga0501261_010937 3300049690 Bacteria 1202
191 Ga0501221_003122 3300049704 Bacteria 2723
192 Ga0501234_014100 3300049707 Bacteria 1254
193 Ga0501245_000180 3300049708 Bacteria 7000
194 Ga0501080_0090384 3300049742 Bacteria 2844
195 Ga0501080_0385193 3300049742 Bacteria 1263
196 Ga0495619_0462023 3300053085 Unclassified 874
197 Ga0500646_0002344 3300053090 Bacteria 4923
198 Ga0500583_0000866 3300053092 Bacteria 8739
199 Ga0500641_0000028 3300053096 Bacteria 105996
200 Ga0500622_0002131 3300053156 Bacteria 14740
201 Ga0466962_0006823 3300061719 Bacteria 5480

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049579 Ga0501043_0247086 Ga0501043_0247086_23_730 231
2 3300049742 Ga0501080_0090384 Ga0501080_0090384_2117_2824 231
3 3300046543 Ga0495645_0161696 Ga0495645_0161696_11_745 240
4 3300053085 Ga0495619_0462023 Ga0495619_0462023_84_818 240
5 3300014326 Ga0157380_10834416 Ga0157380_108344162 241
6 3300049661 Ga0501217_056676 Ga0501217_056676_12_767 248
7 3300053090 Ga0500646_0002344 Ga0500646_0002344_943_1788 264
8 3300053096 Ga0500641_0000028 Ga0500641_0000028_65530_66375 264
9 3300049520 Ga0501297_002605 Ga0501297_002605_234_1094 265
10 3300049521 Ga0501298_003240 Ga0501298_003240_884_1744 265
11 3300049649 Ga0501198_003071 Ga0501198_003071_848_1708 265
12 3300049651 Ga0501201_001671 Ga0501201_001671_1171_2031 265
13 3300049652 Ga0501202_000050 Ga0501202_000050_10120_10980 265
14 3300049653 Ga0501206_000760 Ga0501206_000760_183_1043 265
15 3300049654 Ga0501207_002015 Ga0501207_002015_805_1665 265
16 3300049661 Ga0501217_000079 Ga0501217_000079_9658_10518 265
17 3300049662 Ga0501222_002345 Ga0501222_002345_795_1655 265
18 3300049663 Ga0501223_000157 Ga0501223_000157_7231_8091 265
19 3300049664 Ga0501224_008880 Ga0501224_008880_269_1129 265
20 3300049668 Ga0501233_001909 Ga0501233_001909_1059_1919 265
21 3300049669 Ga0501235_000643 Ga0501235_000643_4728_5588 265
22 3300049673 Ga0501240_001698 Ga0501240_001698_146_1006 265
23 3300049681 Ga0501251_002648 Ga0501251_002648_489_1349 265
24 3300049682 Ga0501252_000296 Ga0501252_000296_1402_2262 265
25 3300049683 Ga0501253_003902 Ga0501253_003902_664_1524 265
26 3300049686 Ga0501257_012047 Ga0501257_012047_580_1440 265
27 3300049688 Ga0501259_001770 Ga0501259_001770_150_1010 265
28 3300049690 Ga0501261_010937 Ga0501261_010937_11_871 265
29 3300049704 Ga0501221_003122 Ga0501221_003122_125_985 265
30 3300049707 Ga0501234_014100 Ga0501234_014100_158_1018 265
31 3300049708 Ga0501245_000180 Ga0501245_000180_4757_5617 265
32 3300036401 Ga0373937_0049079 Ga0373937_0049079_2432_3256 272
33 3300044712 Ga0453684_0144166 Ga0453684_0144166_1385_2230 281
34 3300003323 rootH1_10244603 rootH1_102446032 282
35 3300046660 Ga0495625_0047380 Ga0495625_0047380_655_1515 282
36 3300003354 JGI25160J50197_1001403 JGI25160J50197_100140312 283
37 3300025302 Ga0207426_1000002 Ga0207426_100000231 283
38 3300031727 Ga0316576_10096312 Ga0316576_100963122 283
39 3300035398 Ga0316574_0123314 Ga0316574_0123314_660_1532 283
40 3300042876 Ga0451577_0000043 Ga0451577_0000043_15088_15972 283
41 3300042876 Ga0451577_0607502 Ga0451577_0607502_32_916 283
42 3300044673 Ga0453683_0000055 Ga0453683_0000055_145347_146231 283
43 3300044673 Ga0453683_0006907 Ga0453683_0006907_2037_2912 283
44 3300044673 Ga0453683_0019903 Ga0453683_0019903_1763_2647 283
45 3300044673 Ga0453683_0025379 Ga0453683_0025379_1745_2629 283
46 3300044712 Ga0453684_0000133 Ga0453684_0000133_15084_15968 283
47 3300044712 Ga0453684_0028287 Ga0453684_0028287_517_1374 283
48 3300044712 Ga0453684_0712653 Ga0453684_0712653_32_916 283
49 3300045051 Ga0451576_0000365 Ga0451576_0000365_92428_93312 283
50 3300045051 Ga0451576_0172394 Ga0451576_0172394_95_970 283
51 3300045051 Ga0451576_0173237 Ga0451576_0173237_1059_1943 283
52 3300045051 Ga0451576_0256857 Ga0451576_0256857_139_1014 283
53 3300003320 rootH2_10016488 rootH2_1001648810 284
54 3300003320 rootH2_10027428 rootH2_100274283 284
55 3300005290 Ga0065712_10106363 Ga0065712_101063633 284
56 3300005329 Ga0070683_100001127 Ga0070683_1000011279 284
57 3300005331 Ga0070670_100030034 Ga0070670_1000300344 284
58 3300005341 Ga0070691_10020644 Ga0070691_100206443 284
59 3300005356 Ga0070674_100381568 Ga0070674_1003815682 284
60 3300005535 Ga0070684_100006500 Ga0070684_1000065004 284
61 3300005563 Ga0068855_100001250 Ga0068855_10000125015 284
62 3300009093 Ga0105240_10001800 Ga0105240_100018009 284
63 3300009093 Ga0105240_10004688 Ga0105240_1000468811 284
64 3300009093 Ga0105240_10008284 Ga0105240_100082847 284
65 3300010375 Ga0105239_10000337 Ga0105239_1000033710 284
66 3300010375 Ga0105239_10149057 Ga0105239_101490572 284
67 3300013307 Ga0157372_10122894 Ga0157372_101228942 284
68 3300014325 Ga0163163_10107407 Ga0163163_101074072 284
69 3300025913 Ga0207695_10000051 Ga0207695_10000051308 284
70 3300025913 Ga0207695_10000445 Ga0207695_1000044554 284
71 3300025913 Ga0207695_10004873 Ga0207695_100048739 284
72 3300025944 Ga0207661_10017559 Ga0207661_100175594 284
73 3300025949 Ga0207667_10004308 Ga0207667_100043084 284
74 3300032004 Ga0307414_10291865 Ga0307414_102918651 284
75 3300033180 Ga0307510_10001712 Ga0307510_1000171220 284
76 3300042876 Ga0451577_0220331 Ga0451577_0220331_807_1676 284
77 3300044673 Ga0453683_0000023 Ga0453683_0000023_98311_99180 284
78 3300044673 Ga0453683_0136232 Ga0453683_0136232_106_975 284
79 3300044712 Ga0453684_0196170 Ga0453684_0196170_1289_2158 284
80 3300045051 Ga0451576_0193031 Ga0451576_0193031_972_1841 284
81 3300045051 Ga0451576_0249095 Ga0451576_0249095_66_935 284
82 3300046507 Ga0495606_0006481 Ga0495606_0006481_7866_8732 284
83 3300046648 Ga0495611_0000011 Ga0495611_0000011_41886_42752 284
84 3300005983 Ga0081540_1040093 Ga0081540_10400932 285
85 3300013296 Ga0157374_10000009 Ga0157374_10000009297 285
86 3300014969 Ga0157376_10001803 Ga0157376_1000180312 285
87 3300031507 Ga0307509_10089870 Ga0307509_100898702 285
88 3300033180 Ga0307510_10154877 Ga0307510_101548772 285
89 3300044712 Ga0453684_0018496 Ga0453684_0018496_627_1505 285
90 3300044712 Ga0453684_0107614 Ga0453684_0107614_627_1505 285
91 3300044765 Ga0466970_0137444 Ga0466970_0137444_400_1260 285
92 3300045051 Ga0451576_0004054 Ga0451576_0004054_5284_6165 285
93 3300045051 Ga0451576_0097801 Ga0451576_0097801_41_919 285
94 3300047472 Ga0495686_0000165 Ga0495686_0000165_92143_93021 285
95 3300003316 rootH1_10003167 rootH1_100031675 286
96 3300003320 rootH2_10067129 rootH2_1006712916 286
97 3300003322 rootL2_10137756 rootL2_101377562 286
98 3300003322 rootL2_10179914 rootL2_101799148 286
99 3300005331 Ga0070670_100015444 Ga0070670_1000154446 286
100 3300005335 Ga0070666_10156784 Ga0070666_101567842 286
101 3300005336 Ga0070680_100000574 Ga0070680_10000057423 286
102 3300005337 Ga0070682_100056703 Ga0070682_1000567033 286
103 3300005341 Ga0070691_10001559 Ga0070691_100015598 286
104 3300005367 Ga0070667_100184477 Ga0070667_1001844772 286
105 3300005458 Ga0070681_10009703 Ga0070681_100097037 286
106 3300005458 Ga0070681_10156641 Ga0070681_101566412 286
107 3300005530 Ga0070679_100051077 Ga0070679_1000510773 286
108 3300005539 Ga0068853_100012841 Ga0068853_1000128414 286
109 3300005548 Ga0070665_100000008 Ga0070665_100000008346 286
110 3300005563 Ga0068855_100008453 Ga0068855_1000084535 286
111 3300005563 Ga0068855_100015945 Ga0068855_1000159459 286
112 3300005563 Ga0068855_100249987 Ga0068855_1002499871 286
113 3300005577 Ga0068857_100026099 Ga0068857_1000260992 286
114 3300005578 Ga0068854_100014398 Ga0068854_1000143982 286
115 3300005614 Ga0068856_100034891 Ga0068856_1000348912 286
116 3300005616 Ga0068852_100000180 Ga0068852_10000018023 286
117 3300005843 Ga0068860_100000029 Ga0068860_100000029180 286
118 3300005843 Ga0068860_100033268 Ga0068860_1000332684 286
119 3300006237 Ga0097621_100025419 Ga0097621_1000254193 286
120 3300006358 Ga0068871_100010352 Ga0068871_1000103522 286
121 3300009093 Ga0105240_10003960 Ga0105240_1000396017 286
122 3300009093 Ga0105240_10003982 Ga0105240_1000398219 286
123 3300009093 Ga0105240_10014136 Ga0105240_100141369 286
124 3300009093 Ga0105240_10092893 Ga0105240_100928934 286
125 3300009093 Ga0105240_10138848 Ga0105240_101388482 286
126 3300009174 Ga0105241_10000206 Ga0105241_1000020624 286
127 3300009174 Ga0105241_10001098 Ga0105241_100010985 286
128 3300009174 Ga0105241_10072266 Ga0105241_100722662 286
129 3300009545 Ga0105237_10005211 Ga0105237_100052119 286
130 3300009545 Ga0105237_10007437 Ga0105237_100074373 286
131 3300009545 Ga0105237_10017445 Ga0105237_100174457 286
132 3300009545 Ga0105237_10017874 Ga0105237_100178743 286
133 3300009545 Ga0105237_10028017 Ga0105237_100280175 286
134 3300009551 Ga0105238_10003171 Ga0105238_100031719 286
135 3300009551 Ga0105238_10004388 Ga0105238_100043888 286
136 3300009551 Ga0105238_10144777 Ga0105238_101447772 286
137 3300010375 Ga0105239_10000135 Ga0105239_1000013511 286
138 3300010375 Ga0105239_10011811 Ga0105239_100118112 286
139 3300010375 Ga0105239_10287471 Ga0105239_102874712 286
140 3300013104 Ga0157370_10013436 Ga0157370_100134366 286
141 3300013104 Ga0157370_10021996 Ga0157370_100219963 286
142 3300013105 Ga0157369_10098604 Ga0157369_100986042 286
143 3300013297 Ga0157378_10296221 Ga0157378_102962212 286
144 3300013306 Ga0163162_10000423 Ga0163162_100004238 286
145 3300013306 Ga0163162_10052327 Ga0163162_100523274 286
146 3300013307 Ga0157372_10000258 Ga0157372_1000025819 286
147 3300013307 Ga0157372_10063136 Ga0157372_100631361 286
148 3300013307 Ga0157372_10369120 Ga0157372_103691202 286
149 3300014968 Ga0157379_10177510 Ga0157379_101775102 286
150 3300025903 Ga0207680_10005457 Ga0207680_100054572 286
151 3300025904 Ga0207647_10015814 Ga0207647_100158142 286
152 3300025911 Ga0207654_10000842 Ga0207654_100008424 286
153 3300025911 Ga0207654_10001504 Ga0207654_100015043 286
154 3300025912 Ga0207707_10000111 Ga0207707_1000011151 286
155 3300025913 Ga0207695_10003216 Ga0207695_1000321620 286
156 3300025913 Ga0207695_10003973 Ga0207695_1000397315 286
157 3300025913 Ga0207695_10221297 Ga0207695_102212973 286
158 3300025914 Ga0207671_10038218 Ga0207671_100382182 286
159 3300025914 Ga0207671_10049931 Ga0207671_100499311 286
160 3300025917 Ga0207660_10001012 Ga0207660_1000101216 286
161 3300025921 Ga0207652_10000538 Ga0207652_1000053820 286
162 3300025924 Ga0207694_10006924 Ga0207694_100069243 286
163 3300025949 Ga0207667_10000100 Ga0207667_1000010095 286
164 3300025949 Ga0207667_10013076 Ga0207667_100130767 286
165 3300025949 Ga0207667_10020373 Ga0207667_100203737 286
166 3300025986 Ga0207658_10161431 Ga0207658_101614312 286
167 3300026116 Ga0207674_10003443 Ga0207674_100034439 286
168 3300026142 Ga0207698_10000108 Ga0207698_1000010820 286
169 3300026142 Ga0207698_10325877 Ga0207698_103258772 286
170 3300028379 Ga0268266_10000016 Ga0268266_10000016344 286
171 3300028381 Ga0268264_10000072 Ga0268264_10000072181 286
172 3300028381 Ga0268264_10007515 Ga0268264_100075151 286
173 3300028786 Ga0307517_10000697 Ga0307517_1000069734 286
174 3300028794 Ga0307515_10000078 Ga0307515_10000078166 286
175 3300030521 Ga0307511_10001896 Ga0307511_1000189611 286
176 3300031616 Ga0307508_10237616 Ga0307508_102376161 286
177 3300031730 Ga0307516_10005649 Ga0307516_100056492 286
178 3300031824 Ga0307413_10495543 Ga0307413_104955431 286
179 3300036401 Ga0373937_0357704 Ga0373937_0357704_128_1009 286
180 3300036401 Ga0373937_0553578 Ga0373937_0553578_73_951 286
181 3300044658 Ga0466972_0021694 Ga0466972_0021694_1046_1906 286
182 3300044712 Ga0453684_0096188 Ga0453684_0096188_779_1648 286
183 3300044719 Ga0466971_0105787 Ga0466971_0105787_411_1274 286
184 3300045049 Ga0466959_0014299 Ga0466959_0014299_1269_2132 286
185 3300045836 Ga0466958_0138713 Ga0466958_0138713_652_1515 286
186 3300046459 Ga0495629_0029428 Ga0495629_0029428_2519_3400 286
187 3300046460 Ga0495638_0069082 Ga0495638_0069082_1136_1996 286
188 3300046462 Ga0495651_0370442 Ga0495651_0370442_46_924 286
189 3300046517 Ga0495630_0137454 Ga0495630_0137454_110_1045 286
190 3300046524 Ga0495648_0003626 Ga0495648_0003626_6449_7309 286
191 3300046536 Ga0495587_0131254 Ga0495587_0131254_461_1396 286
192 3300046648 Ga0495611_0154016 Ga0495611_0154016_80_940 286
193 3300046694 Ga0495649_0104737 Ga0495649_0104737_604_1467 286
194 3300047315 Ga0495581_0037801 Ga0495581_0037801_665_1546 286
195 3300047319 Ga0495674_0022982 Ga0495674_0022982_4736_5617 286
196 3300047443 Ga0495687_000004 Ga0495687_000004_474715_475584 286
197 3300047471 Ga0495684_0168065 Ga0495684_0168065_411_1292 286
198 3300049742 Ga0501080_0385193 Ga0501080_0385193_341_1219 286
199 3300053092 Ga0500583_0000866 Ga0500583_0000866_4120_4980 286
200 3300053156 Ga0500622_0002131 Ga0500622_0002131_11909_12769 286
201 3300061719 Ga0466962_0006823 Ga0466962_0006823_3350_4213 286

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04321

RmlD_sub_bind

RmlD substrate binding domain

4

315

0.94

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

6

241

0.93

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

6

213

0.78

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

7

239

0.77

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

62

248

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vl0-assembly1.cif.gz_B crystal structure of a dtdp-4-dehydrorhamnose reductase, rfbd ortholog (ca_c2315) from clostridium acetobutylicum atcc 824 at 2.05 a resolution 0.9756 5 285
3sc6-assembly6.cif.gz_F 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose reductase (rfbd) from bacillus anthracis str. ames in complex with nadp 0.9721 2 284
3sc6-assembly6.cif.gz_F 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose reductase (rfbd) from bacillus anthracis str. ames in complex with nadp 0.9653 2 284
3sc6-assembly5.cif.gz_E 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose reductase (rfbd) from bacillus anthracis str. ames in complex with nadp 0.9632 3 286
1vl0-assembly1.cif.gz_B crystal structure of a dtdp-4-dehydrorhamnose reductase, rfbd ortholog (ca_c2315) from clostridium acetobutylicum atcc 824 at 2.05 a resolution 0.9619 5 285
ID Description Score Start End Superfamily
1vl0C02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9793 163 286 3.90.25.10
1vl0C02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9667 163 286 3.90.25.10
1vl0B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9662 6 215 3.40.50.720
3sc6D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9536 1 215 3.40.50.720
1kc0A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9365 5 285 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A0M3CGC3-F1-model_v4 deleted 0.9942 155 282
AF-A0A5D0I356-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9916 67 286 GO:0008831
GO:0019305
AF-A0A1G9L3Z3-F1-model_v4 deleted 0.9897 2 286
AF-A0A1Q3PW11-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.989 5 286 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A2N2YFY9-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9888 129 285 GO:0005829
GO:0008831
GO:0019305
GO:0045226

Feature Viewer

pLDDT pTM Quality
97.21 0.94 High
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Predicted Structure (AlphaFold2)

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