F308664

General Info

Members Datasets Scaffolds Average Seq Length
201 102 402 469

Family's Representative Sequence

Representative Sequence 3300031251|Ga0265327_10055603|Ga0265327_100556032
Length 490
Sequence MALLLIVFPLLAALAAYLVPSPIHRARLLPAAGTLHLVLLLVALRHWGTLPVNAWLGLDALGAWVLLVISVLFCICAFYAPAYLALRAERDSRIFCLSLLSFLGLASLLAQARHPGVAWVAMETTTLVTAPLIYFNRNRRSLEATWKYLLIGSVGIALALLGTLFLAYAAHFGGLEEPLNFNRLMQHGDLLSRPWLRAAFVLCLVGYGTKMGLAPLHTWKPDAYGETPGLVGALLAGGVTSCAFLALLRIYGVVAAAGEARFAQELLIGFGILSMAWAMVFMVRQMDFKRMLAYSSVEHMGILVFGIGIGGLAAKFALFHLAANALVKSVLFLSAGNIHRSYSSKMLPYVTGAIRRTPISGWLFLLGFLAITGLPPFAPFISEFNIAAGALTTGHALAGGAFLLLLAAIFIAMSETVLQVVFGTPSHQRVRTHYSDNAATTAPLIVALGLAAILGVWLPKPMQVLLDHAAATIDGRAPIRTAHQVEASHE

Samples

Sample ID Description Type Environment
1 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
11 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
12 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
16 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
17 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
18 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
21 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
23 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
24 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
25 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
36 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
37 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
38 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
39 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
40 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
41 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
42 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
43 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
44 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
45 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
46 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
47 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
48 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
49 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
50 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
51 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
52 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
53 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
54 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
55 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
56 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
57 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
58 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
59 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
60 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
61 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
62 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
64 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
74 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
75 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
76 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
77 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
78 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
79 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
80 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
81 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
82 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
83 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
84 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
85 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
86 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
87 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
88 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
89 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
90 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
93 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
94 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
95 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
96 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
97 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
98 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
99 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
100 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
101 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
102 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.5
Nodule 0
Rhizoplane 0.5
Rhizosphere 98.51
Stem 0
Stem Tuber 0
Unclassified 3.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265327_10055603 3300031251 Bacteria 2043
2 Ga0065712_10068709 3300005290 Bacteria 9274
3 Ga0065712_10071564 3300005290 Bacteria 5185
4 Ga0065715_10002168 3300005293 Bacteria 8110
5 Ga0065707_10000766 3300005295 Bacteria 12749
6 Ga0068869_100073560 3300005334 Bacteria 2534
7 Ga0070689_100168252 3300005340 Bacteria 1775
8 Ga0070688_100059801 3300005365 Bacteria 2404
9 Ga0070707_100008476 3300005468 Bacteria 9551
10 Ga0068855_100019975 3300005563 Bacteria 8045
11 Ga0068858_100178342 3300005842 Bacteria 2005
12 Ga0068860_100023211 3300005843 Bacteria 5996
13 Ga0068860_100049036 3300005843 Bacteria 4024
14 Ga0068862_100050777 3300005844 Bacteria 3545
15 Ga0070717_10164602 3300006028 Bacteria 1926
16 Ga0075428_100028870 3300006844 Bacteria 6138
17 Ga0075428_100035855 3300006844 Bacteria 5467
18 Ga0075428_100098704 3300006844 Bacteria 3184
19 Ga0075430_100133868 3300006846 Bacteria 2066
20 Ga0075431_100053899 3300006847 Bacteria 4147
21 Ga0075433_10030801 3300006852 Bacteria 4581
22 Ga0075434_100005562 3300006871 Bacteria 11480
23 Ga0075434_100065899 3300006871 Bacteria 3607
24 Ga0075429_100101344 3300006880 Bacteria 2514
25 Ga0075429_100107282 3300006880 Bacteria 2441
26 Ga0075435_100031368 3300007076 Unclassified 4186
27 Ga0111539_10101801 3300009094 Bacteria 3372
28 Ga0105249_10026269 3300009553 Bacteria 5246
29 Ga0105249_10044690 3300009553 Bacteria 4027
30 Ga0105249_10230203 3300009553 Bacteria 1827
31 Ga0157378_10004023 3300013297 Bacteria 12980
32 Ga0157380_10043173 3300014326 Bacteria 3528
33 Ga0207681_10044796 3300025923 Bacteria 2967
34 Ga0207664_10108683 3300025929 Bacteria 2303
35 Ga0207711_10003437 3300025941 Bacteria 13697
36 Ga0207689_10063562 3300025942 Bacteria 3036
37 Ga0207712_10011619 3300025961 Bacteria 5614
38 Ga0207708_10083928 3300026075 Bacteria 2449
39 Ga0207641_10173390 3300026088 Bacteria 1971
40 Ga0207675_100067358 3300026118 Bacteria 3347
41 Ga0210002_1003976 3300027617 Bacteria 2195
42 Ga0268264_10006121 3300028381 Bacteria 10163
43 Ga0268264_10176721 3300028381 Bacteria 1935
44 Ga0268264_10196327 3300028381 Bacteria 1843
45 Ga0265338_10011997 3300028800 Bacteria 9923
46 Ga0265338_10025141 3300028800 Bacteria 6056
47 Ga0265330_10001778 3300031235 Bacteria 12108
48 Ga0265332_10050037 3300031238 Bacteria 1796
49 Ga0265325_10000078 3300031241 Bacteria 68445
50 Ga0265339_10002343 3300031249 Bacteria 13616
51 Ga0265331_10000103 3300031250 Bacteria 115260
52 Ga0265316_10012915 3300031344 Bacteria 7452
53 Ga0265316_10045820 3300031344 Bacteria 3470
54 Ga0265313_10000956 3300031595 Bacteria 28675
55 Ga0307508_10019081 3300031616 Bacteria 6231
56 Ga0265314_10000078 3300031711 Bacteria 145069
57 Ga0265314_10104657 3300031711 Bacteria 1812
58 Ga0265342_10007390 3300031712 Bacteria 8048
59 Ga0265342_10012992 3300031712 Bacteria 5612
60 Ga0373954_0007696 3300035118 Bacteria 4715
61 Ga0373955_0047020 3300035172 Bacteria 2335
62 Ga0373961_0000003 3300035241 Bacteria 149339
63 Ga0373937_0004199 3300036401 Bacteria 12223
64 Ga0373937_0006853 3300036401 Bacteria 9831
65 Ga0373925_0110914 3300037068 Unclassified 2119
66 Ga0439444_0001721 3300042437 Bacteria 2887
67 Ga0451577_0000035 3300042876 Bacteria 373467
68 Ga0451577_0000047 3300042876 Bacteria 312768
69 Ga0451577_0000067 3300042876 Bacteria 250981
70 Ga0451577_0000106 3300042876 Bacteria 184359
71 Ga0451577_0000148 3300042876 Bacteria 155541
72 Ga0451577_0001330 3300042876 Bacteria 33600
73 Ga0451577_0002199 3300042876 Bacteria 23762
74 Ga0451577_0011951 3300042876 Bacteria 8182
75 Ga0451577_0016439 3300042876 Bacteria 6854
76 Ga0451577_0020443 3300042876 Bacteria 6076
77 Ga0451577_0028073 3300042876 Bacteria 5091
78 Ga0451577_0033412 3300042876 Bacteria 4637
79 Ga0451577_0037637 3300042876 Bacteria 4354
80 Ga0451577_0041450 3300042876 Bacteria 4132
81 Ga0451577_0045623 3300042876 Bacteria 3923
82 Ga0451577_0047805 3300042876 Bacteria 3824
83 Ga0451577_0134339 3300042876 Bacteria 2221
84 Ga0451577_0204153 3300042876 Bacteria 1784
85 Ga0453683_0000027 3300044673 Bacteria 248505
86 Ga0453683_0000095 3300044673 Bacteria 132405
87 Ga0453683_0000185 3300044673 Bacteria 86588
88 Ga0453683_0000243 3300044673 Bacteria 72784
89 Ga0453683_0001791 3300044673 Bacteria 17776
90 Ga0453683_0006673 3300044673 Bacteria 7897
91 Ga0453683_0011680 3300044673 Bacteria 5785
92 Ga0453683_0031114 3300044673 Bacteria 3372
93 Ga0453684_0000097 3300044712 Bacteria 377772
94 Ga0453684_0000176 3300044712 Bacteria 283097
95 Ga0453684_0000215 3300044712 Bacteria 250981
96 Ga0453684_0000417 3300044712 Bacteria 173793
97 Ga0453684_0000460 3300044712 Bacteria 162976
98 Ga0453684_0000611 3300044712 Bacteria 131332
99 Ga0453684_0000980 3300044712 Bacteria 93444
100 Ga0453684_0001096 3300044712 Bacteria 85305
101 Ga0453684_0004901 3300044712 Bacteria 27401
102 Ga0453684_0005752 3300044712 Bacteria 24219
103 Ga0453684_0006440 3300044712 Bacteria 22295
104 Ga0453684_0007846 3300044712 Bacteria 19436
105 Ga0453684_0010381 3300044712 Bacteria 15937
106 Ga0453684_0013800 3300044712 Bacteria 13057
107 Ga0453684_0033732 3300044712 Bacteria 7127
108 Ga0453684_0051821 3300044712 Bacteria 5373
109 Ga0453684_0073662 3300044712 Bacteria 4304
110 Ga0453684_0078664 3300044712 Bacteria 4126
111 Ga0453684_0085446 3300044712 Bacteria 3920
112 Ga0453684_0092135 3300044712 Bacteria 3737
113 Ga0453684_0099346 3300044712 Bacteria 3565
114 Ga0453684_0112791 3300044712 Bacteria 3299
115 Ga0453684_0127872 3300044712 Bacteria 3054
116 Ga0451576_0000021 3300045051 Bacteria 505854
117 Ga0451576_0000118 3300045051 Bacteria 202550
118 Ga0451576_0000344 3300045051 Bacteria 112170
119 Ga0451576_0000806 3300045051 Bacteria 61449
120 Ga0451576_0001136 3300045051 Bacteria 48113
121 Ga0451576_0001345 3300045051 Bacteria 42474
122 Ga0451576_0002010 3300045051 Bacteria 32205
123 Ga0451576_0002349 3300045051 Bacteria 28529
124 Ga0451576_0002574 3300045051 Bacteria 26714
125 Ga0451576_0005197 3300045051 Bacteria 16438
126 Ga0451576_0006035 3300045051 Bacteria 14959
127 Ga0451576_0019044 3300045051 Bacteria 7500
128 Ga0451576_0054908 3300045051 Bacteria 4169
129 Ga0451576_0292691 3300045051 Bacteria 1702
130 Ga0495629_0154282 3300046459 Bacteria 1596
131 Ga0495582_0011354 3300046473 Bacteria 4908
132 Ga0495630_0150112 3300046517 Bacteria 1773
133 Ga0495640_0022270 3300046533 Bacteria 4635
134 Ga0495674_0031254 3300047319 Bacteria 4838
135 Ga0496112_0033663 3300048915 Bacteria 4982
136 Ga0501031_0009967 3300049568 Bacteria 6187
137 Ga0501032_0030671 3300049569 Bacteria 3689
138 Ga0501033_0035558 3300049570 Bacteria 3734
139 Ga0501034_0026619 3300049571 Bacteria 5888
140 Ga0501034_0167537 3300049571 Bacteria 2165
141 Ga0501036_0091975 3300049572 Bacteria 2562
142 Ga0501036_0254275 3300049572 Bacteria 1472
143 Ga0501040_0044904 3300049576 Bacteria 3013
144 Ga0501041_0027983 3300049577 Bacteria 3400
145 Ga0501041_0055643 3300049577 Bacteria 2415
146 Ga0501042_0025084 3300049578 Bacteria 4186
147 Ga0501042_0033171 3300049578 Bacteria 3659
148 Ga0501043_0009937 3300049579 Bacteria 7460
149 Ga0501046_0018293 3300049580 Bacteria 5833
150 Ga0501047_0009292 3300049581 Bacteria 9286
151 Ga0501047_0084946 3300049581 Bacteria 3042
152 Ga0501068_0017698 3300049584 Bacteria 4123
153 Ga0501069_0018397 3300049585 Bacteria 3771
154 Ga0501069_0028561 3300049585 Bacteria 3059
155 Ga0501070_0005214 3300049586 Bacteria 11078
156 Ga0501070_0061447 3300049586 Bacteria 3112
157 Ga0501070_0115913 3300049586 Bacteria 2212
158 Ga0501071_0068275 3300049587 Unclassified 2586
159 Ga0501071_0104717 3300049587 Bacteria 2088
160 Ga0501072_0115044 3300049588 Bacteria 2142
161 Ga0501072_0236014 3300049588 Bacteria 1456
162 Ga0501073_0012596 3300049589 Bacteria 6170
163 Ga0501073_0068785 3300049589 Unclassified 2468
164 Ga0501074_0021932 3300049590 Bacteria 4637
165 Ga0501075_0017567 3300049591 Bacteria 5166
166 Ga0501076_0004520 3300049592 Bacteria 9904
167 Ga0501076_0023695 3300049592 Bacteria 4735
168 Ga0501076_0069253 3300049592 Bacteria 2819
169 Ga0501077_0011572 3300049593 Bacteria 5513
170 Ga0501209_000280 3300049656 Bacteria 6132
171 Ga0501216_000946 3300049660 Bacteria 3700
172 Ga0501233_002034 3300049668 Bacteria 3528
173 Ga0501225_0008545 3300049705 Bacteria 2934
174 Ga0501080_0090903 3300049742 Unclassified 2835
175 Ga0501081_0017397 3300049743 Bacteria 4757
176 Ga0501081_0028209 3300049743 Bacteria 3786
177 Ga0501081_0141612 3300049743 Unclassified 1724
178 Ga0501083_0007635 3300049744 Bacteria 7665
179 Ga0501083_0016932 3300049744 Bacteria 5091
180 Ga0501083_0058033 3300049744 Bacteria 2590
181 Ga0501035_0064767 3300049822 Unclassified 3247
182 Ga0501035_0204670 3300049822 Bacteria 1691
183 Ga0501044_0001324 3300049823 Bacteria 29164
184 Ga0501044_0005990 3300049823 Bacteria 13442
185 Ga0501044_0115466 3300049823 Bacteria 2690
186 Ga0501045_0014454 3300049824 Bacteria 5594
187 Ga0501045_0148976 3300049824 Bacteria 1741
188 nmdc:mga09592_25170_c1 3300050508 Bacteria 4923
189 nmdc:mga09592_7295_c1 3300050508 Bacteria 8983
190 nmdc:mga06r32_325341_c1 3300050510 Bacteria 1523
191 nmdc:mga06r32_46848_c1 3300050510 Bacteria 4126
192 nmdc:mga08y16_3162_c1 3300050511 Bacteria 17067
193 nmdc:mga0n895_5639_c1 3300050512 Bacteria 10490
194 nmdc:mga0rr50_10694_c1 3300050513 Bacteria 5841
195 nmdc:mga0a205_111951_c1 3300050515 Bacteria 2629
196 Ga0500642_0002531 3300053130 Bacteria 5383
197 Ga0501084_0009780 3300054114 Bacteria 7928
198 Ga0501082_0014437 3300060353 Bacteria 6798
199 Ga0501082_0058358 3300060353 Bacteria 3325
200 Ga0530510_0011305 3300061734 Bacteria 6266
201 Ga0530510_0023399 3300061734 Bacteria 4402
202 Ga0265327_10055603
203 Ga0065712_10068709
204 Ga0065712_10071564
205 Ga0065715_10002168
206 Ga0065707_10000766
207 Ga0068869_100073560
208 Ga0070689_100168252
209 Ga0070688_100059801
210 Ga0070707_100008476
211 Ga0068855_100019975
212 Ga0068858_100178342
213 Ga0068860_100023211
214 Ga0068860_100049036
215 Ga0068862_100050777
216 Ga0070717_10164602
217 Ga0075428_100028870
218 Ga0075428_100035855
219 Ga0075428_100098704
220 Ga0075430_100133868
221 Ga0075431_100053899
222 Ga0075433_10030801
223 Ga0075434_100005562
224 Ga0075434_100065899
225 Ga0075429_100101344
226 Ga0075429_100107282
227 Ga0075435_100031368
228 Ga0111539_10101801
229 Ga0105249_10026269
230 Ga0105249_10044690
231 Ga0105249_10230203
232 Ga0157378_10004023
233 Ga0157380_10043173
234 Ga0207681_10044796
235 Ga0207664_10108683
236 Ga0207711_10003437
237 Ga0207689_10063562
238 Ga0207712_10011619
239 Ga0207708_10083928
240 Ga0207641_10173390
241 Ga0207675_100067358
242 Ga0210002_1003976
243 Ga0268264_10006121
244 Ga0268264_10176721
245 Ga0268264_10196327
246 Ga0265338_10011997
247 Ga0265338_10025141
248 Ga0265330_10001778
249 Ga0265332_10050037
250 Ga0265325_10000078
251 Ga0265339_10002343
252 Ga0265331_10000103
253 Ga0265316_10012915
254 Ga0265316_10045820
255 Ga0265313_10000956
256 Ga0307508_10019081
257 Ga0265314_10000078
258 Ga0265314_10104657
259 Ga0265342_10007390
260 Ga0265342_10012992
261 Ga0373954_0007696
262 Ga0373955_0047020
263 Ga0373961_0000003
264 Ga0373937_0004199
265 Ga0373937_0006853
266 Ga0373925_0110914
267 Ga0439444_0001721
268 Ga0451577_0000035
269 Ga0451577_0000047
270 Ga0451577_0000067
271 Ga0451577_0000106
272 Ga0451577_0000148
273 Ga0451577_0001330
274 Ga0451577_0002199
275 Ga0451577_0011951
276 Ga0451577_0016439
277 Ga0451577_0020443
278 Ga0451577_0028073
279 Ga0451577_0033412
280 Ga0451577_0037637
281 Ga0451577_0041450
282 Ga0451577_0045623
283 Ga0451577_0047805
284 Ga0451577_0134339
285 Ga0451577_0204153
286 Ga0453683_0000027
287 Ga0453683_0000095
288 Ga0453683_0000185
289 Ga0453683_0000243
290 Ga0453683_0001791
291 Ga0453683_0006673
292 Ga0453683_0011680
293 Ga0453683_0031114
294 Ga0453684_0000097
295 Ga0453684_0000176
296 Ga0453684_0000215
297 Ga0453684_0000417
298 Ga0453684_0000460
299 Ga0453684_0000611
300 Ga0453684_0000980
301 Ga0453684_0001096
302 Ga0453684_0004901
303 Ga0453684_0005752
304 Ga0453684_0006440
305 Ga0453684_0007846
306 Ga0453684_0010381
307 Ga0453684_0013800
308 Ga0453684_0033732
309 Ga0453684_0051821
310 Ga0453684_0073662
311 Ga0453684_0078664
312 Ga0453684_0085446
313 Ga0453684_0092135
314 Ga0453684_0099346
315 Ga0453684_0112791
316 Ga0453684_0127872
317 Ga0451576_0000021
318 Ga0451576_0000118
319 Ga0451576_0000344
320 Ga0451576_0000806
321 Ga0451576_0001136
322 Ga0451576_0001345
323 Ga0451576_0002010
324 Ga0451576_0002349
325 Ga0451576_0002574
326 Ga0451576_0005197
327 Ga0451576_0006035
328 Ga0451576_0019044
329 Ga0451576_0054908
330 Ga0451576_0292691
331 Ga0495629_0154282
332 Ga0495582_0011354
333 Ga0495630_0150112
334 Ga0495640_0022270
335 Ga0495674_0031254
336 Ga0496112_0033663
337 Ga0501031_0009967
338 Ga0501032_0030671
339 Ga0501033_0035558
340 Ga0501034_0026619
341 Ga0501034_0167537
342 Ga0501036_0091975
343 Ga0501036_0254275
344 Ga0501040_0044904
345 Ga0501041_0027983
346 Ga0501041_0055643
347 Ga0501042_0025084
348 Ga0501042_0033171
349 Ga0501043_0009937
350 Ga0501046_0018293
351 Ga0501047_0009292
352 Ga0501047_0084946
353 Ga0501068_0017698
354 Ga0501069_0018397
355 Ga0501069_0028561
356 Ga0501070_0005214
357 Ga0501070_0061447
358 Ga0501070_0115913
359 Ga0501071_0068275
360 Ga0501071_0104717
361 Ga0501072_0115044
362 Ga0501072_0236014
363 Ga0501073_0012596
364 Ga0501073_0068785
365 Ga0501074_0021932
366 Ga0501075_0017567
367 Ga0501076_0004520
368 Ga0501076_0023695
369 Ga0501076_0069253
370 Ga0501077_0011572
371 Ga0501209_000280
372 Ga0501216_000946
373 Ga0501233_002034
374 Ga0501225_0008545
375 Ga0501080_0090903
376 Ga0501081_0017397
377 Ga0501081_0028209
378 Ga0501081_0141612
379 Ga0501083_0007635
380 Ga0501083_0016932
381 Ga0501083_0058033
382 Ga0501035_0064767
383 Ga0501035_0204670
384 Ga0501044_0001324
385 Ga0501044_0005990
386 Ga0501044_0115466
387 Ga0501045_0014454
388 Ga0501045_0148976
389 nmdc:mga09592_25170_c1
390 nmdc:mga09592_7295_c1
391 nmdc:mga06r32_325341_c1
392 nmdc:mga06r32_46848_c1
393 nmdc:mga08y16_3162_c1
394 nmdc:mga0n895_5639_c1
395 nmdc:mga0rr50_10694_c1
396 nmdc:mga0a205_111951_c1
397 Ga0500642_0002531
398 Ga0501084_0009780
399 Ga0501082_0014437
400 Ga0501082_0058358
401 Ga0530510_0011305
402 Ga0530510_0023399

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00361

Proton_antipo_M

Proton-conducting membrane transporter

116

414

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4he8-assembly2.cif.gz_I crystal structure of the membrane domain of respiratory complex i from thermus thermophilus 0.9005 1 472
6z16-assembly1.cif.gz_d structure of the mrp antiporter complex 0.8978 2 480
6tjv-assembly1.cif.gz_B structure of the ndh-1ms complex from thermosynechococcus elongatus 0.8946 2 479
8e9g-assembly1.cif.gz_M mycobacterial respiratory complex i with both quinone positions modelled 0.894 2 481
6i0d-assembly1.cif.gz_N respiratory complex i from thermus thermophilus with bound decyl-ubiquinone 0.8932 3 472
ID Description Score Start End Superfamily
af_P0CC63_1_145_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.6432 6 119 1.10.287.3510
af_Q2G0W2_1_118_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.6415 2 112 1.20.1070.10
af_Q2G0W2_1_118_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.591 2 112 1.20.1070.10
af_P0CC63_1_145_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.4967 6 119 1.10.287.3510
af_Q57870_1_160_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.4793 275 427 1.20.120.330
ID Description Score Start End GO Terms
AF-A0A2V8IX24-F1-model_v4 Hydrogenase 4 subunit F 0.9866 228 482 GO:0005886
GO:0008137
GO:0042773
AF-A0A1V3TQQ2-F1-model_v4 Hydrogenase 0.9809 1 480 GO:0005886
GO:0016491
AF-A0A7K4APS8-F1-model_v4 Hydrogenase 4 subunit F 0.9801 100 481 GO:0005886
GO:0008137
GO:0042773
AF-A0A2M8BA32-F1-model_v4 Hydrogenase 0.9777 151 480 GO:0005886
GO:0008137
GO:0042773
AF-A0A7V2F0N5-F1-model_v4 Hydrogenase 4 subunit F 0.976 1 480 GO:0005886
GO:0008137
GO:0042773

Map