F308563

General Info

Members Datasets Scaffolds Average Seq Length
201 146 402 199

Family's Representative Sequence

Representative Sequence 3300025263|Ga0209565_1011136|Ga0209565_10111362
Length 218
Sequence MSSRQADADAATCAHNSAMTQTADLLNEALTTFDALFAEARVAGEPDPTAMSVATASLDGRPSVRTVLLKAHDARGFVFYTHLDGRKGRELQANPHAALLFHWPRVRHGVQVRIEGAVEIVSDAEADAYFASRPRGSQLGAWASKQSETLEGRETFEQRLAEAERSFEGEVPRPPRWTGLRVRADKIEFWYGVDFRLHERWLYESDPAGAYSKRMLYP

Samples

Sample ID Description Type Environment
1 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
5 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
6 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
7 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
8 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
9 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
10 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
11 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
28 3300012482 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510 Metagenome Rhizosphere
29 3300012495 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610 Metagenome Rhizosphere
30 3300012512 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510 Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
36 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
37 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
38 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
39 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
41 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
42 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
43 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
63 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
64 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
65 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
66 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
67 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
68 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
69 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
70 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
71 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
72 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
73 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
74 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
75 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
76 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
77 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
80 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
81 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
82 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
83 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
84 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
85 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
86 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
87 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
90 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
91 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
92 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
93 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
94 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
95 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
96 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
97 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
101 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
102 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
103 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
104 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
105 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
106 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
107 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
108 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
109 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
110 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
111 3300049526 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_B_7_control Metagenome Rhizosphere
112 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
125 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
128 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
129 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
132 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
136 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
137 2643221559 Lysobacter sp. Root559 Isolate Unclassified
138 2643221573 Lysobacter sp. Root604 Isolate Unclassified
139 2643221586 Lysobacter sp. Root667 Isolate Unclassified
140 2643221612 Lysobacter sp. Root76 Isolate Unclassified
141 2643221720 Lysobacter sp. Root916 Isolate Unclassified
142 2643221727 Lysobacter sp. Root96 Isolate Unclassified
143 2643221728 Lysobacter sp. Root983 Isolate Unclassified
144 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
145 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
146 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.53
Metatranscriptomes 0
Isolates 5.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.91
Nodule 0.5
Rhizoplane 6.97
Rhizosphere 69.15
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0209565_1011136 3300025263 Bacteria 2201
2 rootH2_10029901 3300003320 Bacteria 2137
3 rootL2_10329918 3300003322 Bacteria 1951
4 Ga0055526_1000611 3300003771 Bacteria 27705
5 Ga0055526_1028540 3300003771 Bacteria 1685
6 Ga0055537_1000632 3300003773 Bacteria 18888
7 Ga0055524_1000565 3300003775 Bacteria 27705
8 Ga0055536_1011768 3300003781 Bacteria 3309
9 Ga0055534_1000592 3300003784 Bacteria 18894
10 Ga0055528_1000577 3300003790 Bacteria 27705
11 Ga0055530_10001430 3300003791 Bacteria 17478
12 Ga0055531_10000859 3300003794 Bacteria 24927
13 Ga0070658_10213967 3300005327 Bacteria 1629
14 Ga0070658_10288729 3300005327 Bacteria 1397
15 Ga0070660_100649537 3300005339 Bacteria 883
16 Ga0070669_100039420 3300005353 Bacteria 3433
17 Ga0070671_100084089 3300005355 Bacteria 2661
18 Ga0070671_100774655 3300005355 Bacteria 834
19 Ga0070673_100961063 3300005364 Bacteria 794
20 Ga0070663_100048750 3300005455 Bacteria 3005
21 Ga0070679_100284496 3300005530 Bacteria 1606
22 Ga0070672_100186948 3300005543 Bacteria 1728
23 Ga0070693_100957030 3300005547 Bacteria 645
24 Ga0070664_100366828 3300005564 Bacteria 1312
25 Ga0068863_100192918 3300005841 Bacteria 1958
26 Ga0075363_100248368 3300006048 Bacteria 1024
27 Ga0099826_10152220 3300006948 Bacteria 1322
28 Ga0105248_10785726 3300009177 Bacteria 1074
29 Ga0105238_10451259 3300009551 Bacteria 1283
30 Ga0105032_102385 3300009979 Bacteria 1678
31 Ga0157318_1002303 3300012482 Bacteria 1029
32 Ga0157323_1001693 3300012495 Bacteria 1142
33 Ga0157327_1000256 3300012512 Bacteria 2724
34 Ga0157327_1018541 3300012512 Bacteria 760
35 Ga0157370_10802036 3300013104 Bacteria 857
36 Ga0157369_10050590 3300013105 Bacteria 4499
37 Ga0157372_10544210 3300013307 Bacteria 1353
38 Ga0157375_11316045 3300013308 Bacteria 850
39 Ga0183360_10001 3300015689 Bacteria 3943671
40 Ga0209565_1000005 3300025263 Bacteria 947317
41 Ga0209673_1000011 3300025273 Bacteria 586604
42 Ga0209673_1002228 3300025273 Bacteria 14062
43 Ga0209130_1010593 3300025284 Bacteria 2526
44 Ga0209675_1000004 3300025291 Bacteria 947166
45 Ga0209675_1009686 3300025291 Bacteria 3378
46 Ga0209676_1002289 3300025292 Bacteria 13976
47 Ga0209676_1002836 3300025292 Bacteria 11460
48 Ga0209676_1005995 3300025292 Bacteria 6138
49 Ga0209676_1006110 3300025292 Bacteria 6045
50 Ga0209025_1002559 3300025294 Bacteria 18956
51 Ga0209025_1018249 3300025294 Bacteria 3995
52 Ga0209564_1000018 3300025295 Bacteria 586913
53 Ga0209564_1011251 3300025295 Bacteria 4028
54 Ga0209758_1004219 3300025297 Bacteria 12172
55 Ga0209050_1004595 3300025298 Bacteria 9241
56 Ga0209256_1000021 3300025299 Bacteria 537097
57 Ga0209256_1001931 3300025299 Bacteria 18905
58 Ga0209256_1001968 3300025299 Bacteria 18535
59 Ga0209256_1003950 3300025299 Bacteria 9752
60 Ga0209257_1000378 3300025304 Bacteria 88945
61 Ga0209257_1001559 3300025304 Bacteria 26504
62 Ga0209257_1002172 3300025304 Bacteria 20325
63 Ga0209257_1003245 3300025304 Bacteria 14283
64 Ga0209257_1016938 3300025304 Bacteria 2906
65 Ga0207695_10006492 3300025913 Bacteria 15162
66 Ga0207657_10047300 3300025919 Bacteria 3763
67 Ga0207644_10014368 3300025931 Bacteria 5296
68 Ga0207691_10290271 3300025940 Bacteria 1407
69 Ga0207651_10262787 3300025960 Bacteria 1418
70 Ga0207678_10069581 3300026067 Bacteria 3018
71 Ga0207676_10940387 3300026095 Bacteria 849
72 Ga0209969_1003645 3300027360 Bacteria 2135
73 Ga0209967_1006671 3300027364 Bacteria 1571
74 Ga0209984_1004342 3300027424 Bacteria 1667
75 Ga0210000_1030446 3300027462 Bacteria 843
76 Ga0209995_1002391 3300027471 Bacteria 2959
77 Ga0209999_1011065 3300027543 Bacteria 1631
78 Ga0209970_1005220 3300027614 Bacteria 2146
79 Ga0209983_1000791 3300027665 Bacteria 6879
80 Ga0209971_1007527 3300027682 Bacteria 2586
81 Ga0209974_10014339 3300027876 Bacteria 2637
82 Ga0307408_100225272 3300031548 Bacteria 1532
83 Ga0307405_10126812 3300031731 Bacteria 1756
84 Ga0307413_10000233 3300031824 Bacteria 16508
85 Ga0307413_10071409 3300031824 Bacteria 2187
86 Ga0307413_10287878 3300031824 Bacteria 1239
87 Ga0307410_10050146 3300031852 Bacteria 2805
88 Ga0307406_10014902 3300031901 Bacteria 4483
89 Ga0307407_10551917 3300031903 Bacteria 852
90 Ga0307412_10212568 3300031911 Bacteria 1477
91 Ga0307412_10231078 3300031911 Bacteria 1424
92 Ga0307409_101162484 3300031995 Bacteria 794
93 Ga0307416_100632724 3300032002 Bacteria 1153
94 Ga0307414_10007125 3300032004 Bacteria 6276
95 Ga0307414_10023925 3300032004 Bacteria 3884
96 Ga0307414_10048252 3300032004 Bacteria 2936
97 Ga0307414_10139547 3300032004 Bacteria 1895
98 Ga0307414_10252616 3300032004 Bacteria 1466
99 Ga0307411_10461588 3300032005 Bacteria 1065
100 Ga0395899_0019743 3300037312 Bacteria 5117
101 Ga0395899_0189450 3300037312 Bacteria 1440
102 Ga0395900_0005142 3300037418 Bacteria 13739
103 Ga0395900_0113701 3300037418 Bacteria 2778
104 Ga0395898_0111436 3300037466 Bacteria 2623
105 Ga0395905_0001001 3300037471 Bacteria 36164
106 Ga0395905_0022363 3300037471 Bacteria 5981
107 Ga0395905_0151591 3300037471 Bacteria 2181
108 Ga0395905_0352250 3300037471 Bacteria 1364
109 Ga0395905_0672809 3300037471 Bacteria 937
110 Ga0395901_0021415 3300038443 Bacteria 6623
111 Ga0439436_0004872 3300041404 Bacteria 4119
112 Ga0439436_0006926 3300041404 Bacteria 3485
113 Ga0439436_0027281 3300041404 Bacteria 1671
114 Ga0439439_0001368 3300041406 Bacteria 4822
115 Ga0439447_002067 3300041407 Bacteria 7383
116 Ga0439445_0004733 3300042004 Bacteria 3086
117 Ga0439432_019005 3300042006 Bacteria 2293
118 Ga0439449_0013275 3300042007 Bacteria 3099
119 Ga0439449_0031064 3300042007 Bacteria 1991
120 Ga0439449_0078277 3300042007 Bacteria 1219
121 Ga0439452_042113 3300042010 Bacteria 1071
122 Ga0439457_034930 3300042014 Bacteria 1118
123 Ga0450923_070853 3300042125 Bacteria 773
124 Ga0451577_0061298 3300042876 Bacteria 3354
125 Ga0453684_0948681 3300044712 Bacteria 918
126 Ga0495638_0117514 3300046460 Bacteria 1574
127 Ga0495643_0184389 3300046522 Bacteria 1012
128 Ga0495663_0025207 3300046525 Bacteria 1733
129 Ga0495663_0088199 3300046525 Bacteria 1008
130 Ga0495663_0196130 3300046525 Bacteria 703
131 Ga0495598_0077185 3300046537 Bacteria 1061
132 Ga0495656_0037252 3300046615 Bacteria 2008
133 Ga0495656_0052356 3300046615 Bacteria 1750
134 Ga0495656_0055498 3300046615 Bacteria 1708
135 Ga0495668_0004504 3300046616 Bacteria 9862
136 Ga0495668_0071144 3300046616 Bacteria 1912
137 Ga0495659_0013776 3300046664 Bacteria 2637
138 Ga0495636_0000475 3300047318 Bacteria 14776
139 Ga0495636_0002598 3300047318 Bacteria 6944
140 Ga0495636_0009041 3300047318 Bacteria 3917
141 Ga0495636_0089179 3300047318 Bacteria 1337
142 Ga0496100_0083390 3300048903 Bacteria 2164
143 Ga0496100_0466338 3300048903 Bacteria 970
144 Ga0496101_0172075 3300048904 Bacteria 1665
145 Ga0496106_0520440 3300048909 Bacteria 955
146 Ga0496107_0441635 3300048910 Bacteria 967
147 Ga0496108_0022219 3300048911 Bacteria 5216
148 Ga0496108_0917291 3300048911 Bacteria 751
149 Ga0496109_0010566 3300048912 Bacteria 7894
150 Ga0496109_0213537 3300048912 Bacteria 1814
151 Ga0496111_0624236 3300048914 Bacteria 788
152 Ga0496112_0072650 3300048915 Bacteria 3400
153 Ga0496113_0026001 3300048916 Bacteria 4181
154 Ga0496114_0066156 3300048917 Bacteria 3030
155 Ga0496115_0526199 3300048918 Bacteria 948
156 Ga0496121_0002888 3300048924 Bacteria 25271
157 Ga0501290_001765 3300049513 Bacteria 2885
158 Ga0501303_012994 3300049526 Bacteria 809
159 Ga0501031_0015325 3300049568 Bacteria 4980
160 Ga0501032_0017532 3300049569 Bacteria 5026
161 Ga0501033_0005592 3300049570 Bacteria 9932
162 Ga0501033_0152170 3300049570 Bacteria 1669
163 Ga0501034_0000834 3300049571 Bacteria 45735
164 Ga0501034_0009832 3300049571 Bacteria 9998
165 Ga0501034_0027414 3300049571 Bacteria 5793
166 Ga0501034_0173007 3300049571 Bacteria 2126
167 Ga0501036_0025210 3300049572 Bacteria 5017
168 Ga0501037_0003481 3300049573 Bacteria 11423
169 Ga0501038_0013201 3300049574 Bacteria 7533
170 Ga0501039_0065561 3300049575 Bacteria 2817
171 Ga0501041_0568473 3300049577 Bacteria 723
172 Ga0501043_0002300 3300049579 Bacteria 16211
173 Ga0501043_0026474 3300049579 Bacteria 4549
174 Ga0501046_0350643 3300049580 Bacteria 1072
175 Ga0501047_0156720 3300049581 Bacteria 2151
176 Ga0501047_0253976 3300049581 Bacteria 1606
177 Ga0501068_0159666 3300049584 Bacteria 1421
178 Ga0501070_0043739 3300049586 Bacteria 3727
179 Ga0501070_0244931 3300049586 Bacteria 1467
180 Ga0501071_0046271 3300049587 Bacteria 3125
181 Ga0501073_0080380 3300049589 Bacteria 2268
182 Ga0501240_018499 3300049673 Bacteria 1025
183 Ga0501257_022931 3300049686 Bacteria 1479
184 Ga0501080_0260143 3300049742 Bacteria 1581
185 Ga0501265_003743 3300049762 Bacteria 1729
186 Ga0501275_000109 3300049772 Bacteria 8688
187 Ga0501035_0019380 3300049822 Bacteria 6258
188 Ga0501044_0005344 3300049823 Bacteria 14277
189 Ga0501044_0078771 3300049823 Bacteria 3339
190 Ga0501045_0511561 3300049824 Bacteria 892
191 2512642529 2512564014 Bacteria 4639632
192 2643816600 2643221559 Bacteria 4424915
193 2643881950 2643221573 Bacteria 4784121
194 2643938720 2643221586 Bacteria 4446529
195 2644077536 2643221612 Bacteria 4361984
196 2644661609 2643221720 Bacteria 4694283
197 2644694149 2643221727 Bacteria 4415595
198 2644701309 2643221728 Bacteria 4797149
199 2941492777 2941489479 Bacteria 6313767
200 2995952974 2995948881 Bacteria 6358104
201 8003016772 8003014200 Bacteria 4059994
202 Ga0209565_1011136
203 rootH2_10029901
204 rootL2_10329918
205 Ga0055526_1000611
206 Ga0055526_1028540
207 Ga0055537_1000632
208 Ga0055524_1000565
209 Ga0055536_1011768
210 Ga0055534_1000592
211 Ga0055528_1000577
212 Ga0055530_10001430
213 Ga0055531_10000859
214 Ga0070658_10213967
215 Ga0070658_10288729
216 Ga0070660_100649537
217 Ga0070669_100039420
218 Ga0070671_100084089
219 Ga0070671_100774655
220 Ga0070673_100961063
221 Ga0070663_100048750
222 Ga0070679_100284496
223 Ga0070672_100186948
224 Ga0070693_100957030
225 Ga0070664_100366828
226 Ga0068863_100192918
227 Ga0075363_100248368
228 Ga0099826_10152220
229 Ga0105248_10785726
230 Ga0105238_10451259
231 Ga0105032_102385
232 Ga0157318_1002303
233 Ga0157323_1001693
234 Ga0157327_1000256
235 Ga0157327_1018541
236 Ga0157370_10802036
237 Ga0157369_10050590
238 Ga0157372_10544210
239 Ga0157375_11316045
240 Ga0183360_10001
241 Ga0209565_1000005
242 Ga0209673_1000011
243 Ga0209673_1002228
244 Ga0209130_1010593
245 Ga0209675_1000004
246 Ga0209675_1009686
247 Ga0209676_1002289
248 Ga0209676_1002836
249 Ga0209676_1005995
250 Ga0209676_1006110
251 Ga0209025_1002559
252 Ga0209025_1018249
253 Ga0209564_1000018
254 Ga0209564_1011251
255 Ga0209758_1004219
256 Ga0209050_1004595
257 Ga0209256_1000021
258 Ga0209256_1001931
259 Ga0209256_1001968
260 Ga0209256_1003950
261 Ga0209257_1000378
262 Ga0209257_1001559
263 Ga0209257_1002172
264 Ga0209257_1003245
265 Ga0209257_1016938
266 Ga0207695_10006492
267 Ga0207657_10047300
268 Ga0207644_10014368
269 Ga0207691_10290271
270 Ga0207651_10262787
271 Ga0207678_10069581
272 Ga0207676_10940387
273 Ga0209969_1003645
274 Ga0209967_1006671
275 Ga0209984_1004342
276 Ga0210000_1030446
277 Ga0209995_1002391
278 Ga0209999_1011065
279 Ga0209970_1005220
280 Ga0209983_1000791
281 Ga0209971_1007527
282 Ga0209974_10014339
283 Ga0307408_100225272
284 Ga0307405_10126812
285 Ga0307413_10000233
286 Ga0307413_10071409
287 Ga0307413_10287878
288 Ga0307410_10050146
289 Ga0307406_10014902
290 Ga0307407_10551917
291 Ga0307412_10212568
292 Ga0307412_10231078
293 Ga0307409_101162484
294 Ga0307416_100632724
295 Ga0307414_10007125
296 Ga0307414_10023925
297 Ga0307414_10048252
298 Ga0307414_10139547
299 Ga0307414_10252616
300 Ga0307411_10461588
301 Ga0395899_0019743
302 Ga0395899_0189450
303 Ga0395900_0005142
304 Ga0395900_0113701
305 Ga0395898_0111436
306 Ga0395905_0001001
307 Ga0395905_0022363
308 Ga0395905_0151591
309 Ga0395905_0352250
310 Ga0395905_0672809
311 Ga0395901_0021415
312 Ga0439436_0004872
313 Ga0439436_0006926
314 Ga0439436_0027281
315 Ga0439439_0001368
316 Ga0439447_002067
317 Ga0439445_0004733
318 Ga0439432_019005
319 Ga0439449_0013275
320 Ga0439449_0031064
321 Ga0439449_0078277
322 Ga0439452_042113
323 Ga0439457_034930
324 Ga0450923_070853
325 Ga0451577_0061298
326 Ga0453684_0948681
327 Ga0495638_0117514
328 Ga0495643_0184389
329 Ga0495663_0025207
330 Ga0495663_0088199
331 Ga0495663_0196130
332 Ga0495598_0077185
333 Ga0495656_0037252
334 Ga0495656_0052356
335 Ga0495656_0055498
336 Ga0495668_0004504
337 Ga0495668_0071144
338 Ga0495659_0013776
339 Ga0495636_0000475
340 Ga0495636_0002598
341 Ga0495636_0009041
342 Ga0495636_0089179
343 Ga0496100_0083390
344 Ga0496100_0466338
345 Ga0496101_0172075
346 Ga0496106_0520440
347 Ga0496107_0441635
348 Ga0496108_0022219
349 Ga0496108_0917291
350 Ga0496109_0010566
351 Ga0496109_0213537
352 Ga0496111_0624236
353 Ga0496112_0072650
354 Ga0496113_0026001
355 Ga0496114_0066156
356 Ga0496115_0526199
357 Ga0496121_0002888
358 Ga0501290_001765
359 Ga0501303_012994
360 Ga0501031_0015325
361 Ga0501032_0017532
362 Ga0501033_0005592
363 Ga0501033_0152170
364 Ga0501034_0000834
365 Ga0501034_0009832
366 Ga0501034_0027414
367 Ga0501034_0173007
368 Ga0501036_0025210
369 Ga0501037_0003481
370 Ga0501038_0013201
371 Ga0501039_0065561
372 Ga0501041_0568473
373 Ga0501043_0002300
374 Ga0501043_0026474
375 Ga0501046_0350643
376 Ga0501047_0156720
377 Ga0501047_0253976
378 Ga0501068_0159666
379 Ga0501070_0043739
380 Ga0501070_0244931
381 Ga0501071_0046271
382 Ga0501073_0080380
383 Ga0501240_018499
384 Ga0501257_022931
385 Ga0501080_0260143
386 Ga0501265_003743
387 Ga0501275_000109
388 Ga0501035_0019380
389 Ga0501044_0005344
390 Ga0501044_0078771
391 Ga0501045_0511561
392 2512642529
393 2643816600
394 2643881950
395 2643938720
396 2644077536
397 2644661609
398 2644694149
399 2644701309
400 2941492777
401 2995952974
402 8003016772

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10590

PNP_phzG_C

Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region

177

218

0.99

PF01243

Putative_PNPOx

Pyridoxamine 5'-phosphate oxidase

37

125

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1jnw-assembly1.cif.gz_A-2 active site structure of e. coli pyridoxine 5'-phosphate oxidase 0.9146 1 200
3hy8-assembly1.cif.gz_A-2 crystal structure of human pyridoxine 5'-phosphate oxidase r229w mutant 0.9128 10 200
1dnl-assembly1.cif.gz_A x-ray structure of escherichia coli pyridoxine 5'-phosphate oxidase complexed with fmn at 1.8 angstrom resolution 0.9095 1 200
6ymh-assembly1.cif.gz_BBB x-ray structure of the k72i, y129f, r133l, h199a quadruple mutant of pnp-oxidase from e. coli in complex with plp 0.9062 1 200
6ylz-assembly1.cif.gz_AAA-2 x-ray structure of the k72i,y129f,r133l, h199a quadruple mutant of pnp-oxidase from e. coli 0.8999 1 200
ID Description Score Start End Superfamily
af_Q9LTX3_323_519_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9262 12 188 2.30.110.10
af_P9WIJ1_24_224_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9114 14 200 2.30.110.10
af_Q20939_8_226_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8915 12 200 2.30.110.10
af_Q54YS6_26_227_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8908 1 200 2.30.110.10
1wv4B00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8852 1 200 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A3D4K823-F1-model_v4 Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) 0.9623 48 200 GO:0004733
GO:0008615
GO:0010181
AF-A0A7X6VWK3-F1-model_v4 Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) 0.9615 49 200 GO:0004733
GO:0008615
GO:0010181
AF-A0A2S6QUP5-F1-model_v4 Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) 0.9604 33 200 GO:0004733
GO:0008615
GO:0010181
AF-A0A7Y2BJG1-F1-model_v4 Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) 0.9587 36 200 GO:0004733
GO:0008615
GO:0010181
AF-A0A519G4M9-F1-model_v4 deleted 0.9569 44 200

Map