F308147

General Info

Members Datasets Scaffolds Average Seq Length
201 144 402 212

Family's Representative Sequence

Representative Sequence 3300005356|Ga0070674_100195275|Ga0070674_1001952752
Length 252
Sequence MPSPGSTFGCGFSNPMESSLTGTTTGVGSERAEIPTQEATMEANGHTPWHITGRHAGSCNCDWACPCQFNALPSHGYCEALLAWEITDGNFGDLSMDGVRFGFAVHWPGAIHEGNGVAQPVVGEGASDEQRDAILAIASGQQGGDFFEIIASTLSEVREPVVAPIELDVDRDARRGTFKLEGVGNSSIEPIVNPDIPDSGEHRVRIDLPDGFEYKQAEIGDSVDWNVDSGAPLSFAHNNTYAQMYEFEWSNA

Samples

Sample ID Description Type Environment
1 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300013044 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
58 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
91 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
92 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
93 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
97 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
98 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
99 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
100 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
101 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
102 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
103 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
104 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
105 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
106 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
107 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
108 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
111 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
112 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
113 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
119 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
120 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
121 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
129 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
130 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
140 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
143 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
144 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.54
Metatranscriptomes 6.97
Isolates 0.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.99
Nodule 0
Rhizoplane 7.46
Rhizosphere 88.56
Stem 0
Stem Tuber 0
Unclassified 11.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070674_100195275 3300005356 Bacteria 1559
2 Ga0070658_10042693 3300005327 Bacteria 3663
3 Ga0070658_10044636 3300005327 Bacteria 3582
4 Ga0070683_100994834 3300005329 Bacteria 805
5 Ga0070690_100079226 3300005330 Unclassified 2148
6 Ga0070680_100061468 3300005336 Bacteria 3075
7 Ga0070680_100335640 3300005336 Bacteria 1284
8 Ga0068868_100108255 3300005338 Bacteria 2256
9 Ga0070660_100046411 3300005339 Bacteria 3330
10 Ga0070660_100175147 3300005339 Bacteria 1734
11 Ga0070674_100428452 3300005356 Bacteria 1087
12 Ga0070673_100407384 3300005364 Bacteria 1217
13 Ga0070673_100456197 3300005364 Bacteria 1150
14 Ga0070659_100000554 3300005366 Bacteria 27347
15 Ga0070659_100427877 3300005366 Bacteria 1120
16 Ga0070709_10481562 3300005434 Bacteria 940
17 Ga0070710_10185345 3300005437 Bacteria 1306
18 Ga0070711_100009858 3300005439 Bacteria 5891
19 Ga0070711_100394000 3300005439 Bacteria 1123
20 Ga0070708_100000318 3300005445 Bacteria 36350
21 Ga0070708_100007912 3300005445 Bacteria 8509
22 Ga0070708_100261162 3300005445 Bacteria 1628
23 Ga0070678_100148083 3300005456 Bacteria 1887
24 Ga0070681_10191921 3300005458 Bacteria 1962
25 Ga0070681_10213462 3300005458 Bacteria 1846
26 Ga0070706_100002099 3300005467 Bacteria 20324
27 Ga0070706_100146163 3300005467 Bacteria 2207
28 Ga0070706_100747176 3300005467 Bacteria 906
29 Ga0070707_100031409 3300005468 Bacteria 5059
30 Ga0070707_100076012 3300005468 Bacteria 3240
31 Ga0070707_100219044 3300005468 Bacteria 1854
32 Ga0070707_100257364 3300005468 Bacteria 1698
33 Ga0070707_100413822 3300005468 Bacteria 1308
34 Ga0070679_100034571 3300005530 Bacteria 5009
35 Ga0070679_100040463 3300005530 Bacteria 4637
36 Ga0070679_100434973 3300005530 Unclassified 1257
37 Ga0070684_100507583 3300005535 Bacteria 1117
38 Ga0068855_100276090 3300005563 Bacteria 1868
39 Ga0068855_100280918 3300005563 Unclassified 1849
40 Ga0068854_100199716 3300005578 Bacteria 1571
41 Ga0068856_100102719 3300005614 Bacteria 2852
42 Ga0068852_100339000 3300005616 Bacteria 1465
43 Ga0068866_10177844 3300005718 Bacteria 1254
44 Ga0068858_100379473 3300005842 Bacteria 1356
45 Ga0068860_100584602 3300005843 Bacteria 1121
46 Ga0070712_100028815 3300006175 Bacteria 3717
47 Ga0075367_10032683 3300006178 Bacteria 2995
48 Ga0075370_10052580 3300006353 Bacteria 2311
49 Ga0075428_100000004 3300006844 Bacteria 326694
50 Ga0075433_10186253 3300006852 Bacteria 1847
51 Ga0075434_100058525 3300006871 Bacteria 3830
52 Ga0075434_100399007 3300006871 Bacteria 1396
53 Ga0075429_100032198 3300006880 Bacteria 4557
54 Ga0068865_100083470 3300006881 Bacteria 2300
55 Ga0075435_100004185 3300007076 Bacteria 9898
56 Ga0075435_100156156 3300007076 Bacteria 1920
57 Ga0105240_10068592 3300009093 Bacteria 4392
58 Ga0111539_10000005 3300009094 Bacteria 467342
59 Ga0105245_10025582 3300009098 Bacteria 5191
60 Ga0114129_10315530 3300009147 Unclassified 2079
61 Ga0114129_10896493 3300009147 Bacteria 1124
62 Ga0105243_10375025 3300009148 Unclassified 1314
63 Ga0105242_10277608 3300009176 Bacteria 1520
64 Ga0105237_10256111 3300009545 Bacteria 1752
65 Ga0105237_10285542 3300009545 Bacteria 1653
66 Ga0105237_10319866 3300009545 Bacteria 1555
67 Ga0105238_10049140 3300009551 Bacteria 4249
68 Ga0105249_10258300 3300009553 Bacteria 1730
69 Ga0154019_130497 3300013044 Unclassified 1049
70 Ga0157373_10372577 3300013100 Bacteria 1020
71 Ga0157371_10013288 3300013102 Bacteria 6261
72 Ga0157370_10023534 3300013104 Bacteria 6113
73 Ga0157369_10020657 3300013105 Bacteria 7364
74 Ga0157369_10027097 3300013105 Bacteria 6354
75 Ga0157372_10480708 3300013307 Bacteria 1448
76 Ga0157372_11102230 3300013307 Bacteria 918
77 Ga0157375_10017817 3300013308 Bacteria 6423
78 Ga0157380_10208943 3300014326 Unclassified 1738
79 Ga0157380_10699729 3300014326 Bacteria 1018
80 Ga0157380_10747483 3300014326 Unclassified 989
81 Ga0157376_10043237 3300014969 Bacteria 3697
82 Ga0197907_10228109 3300020069 Bacteria 5500
83 Ga0197907_11017602 3300020069 Bacteria 946
84 Ga0206356_10827037 3300020070 Bacteria 1351
85 Ga0206349_1520426 3300020075 Bacteria 4829
86 Ga0206355_1378181 3300020076 Bacteria 5379
87 Ga0206351_10089236 3300020077 Bacteria 3612
88 Ga0206352_10619173 3300020078 Bacteria 3452
89 Ga0206350_10095932 3300020080 Bacteria 2529
90 Ga0206354_10005608 3300020081 Bacteria 2505
91 Ga0206353_10282490 3300020082 Bacteria 6213
92 Ga0154015_1209056 3300020610 Bacteria 3064
93 Ga0224712_10004133 3300022467 Bacteria 3880
94 Ga0224712_10371996 3300022467 Unclassified 678
95 Ga0207642_10068433 3300025899 Bacteria 1680
96 Ga0207688_10134568 3300025901 Bacteria 1451
97 Ga0207705_10680220 3300025909 Unclassified 800
98 Ga0207684_10002784 3300025910 Bacteria 17391
99 Ga0207684_10165959 3300025910 Bacteria 1902
100 Ga0207684_10565420 3300025910 Unclassified 972
101 Ga0207707_10037894 3300025912 Bacteria 4212
102 Ga0207707_10504373 3300025912 Bacteria 1032
103 Ga0207671_10616982 3300025914 Bacteria 864
104 Ga0207693_10019881 3300025915 Bacteria 5341
105 Ga0207663_10115849 3300025916 Bacteria 1826
106 Ga0207660_10133107 3300025917 Bacteria 1894
107 Ga0207660_10599487 3300025917 Bacteria 897
108 Ga0207657_10042548 3300025919 Bacteria 4007
109 Ga0207657_10360628 3300025919 Bacteria 1146
110 Ga0207657_10365917 3300025919 Bacteria 1136
111 Ga0207652_10132830 3300025921 Bacteria 2221
112 Ga0207652_10511633 3300025921 Bacteria 1080
113 Ga0207646_10066546 3300025922 Bacteria 3217
114 Ga0207646_10074213 3300025922 Bacteria 3039
115 Ga0207646_10176540 3300025922 Bacteria 1929
116 Ga0207646_10392938 3300025922 Bacteria 1253
117 Ga0207687_10003659 3300025927 Bacteria 10358
118 Ga0207664_10948178 3300025929 Bacteria 772
119 Ga0207690_10001718 3300025932 Bacteria 13452
120 Ga0207690_10020075 3300025932 Bacteria 4123
121 Ga0207686_10160332 3300025934 Bacteria 1576
122 Ga0207669_10131887 3300025937 Bacteria 1719
123 Ga0207661_10913063 3300025944 Bacteria 809
124 Ga0207667_10315190 3300025949 Bacteria 1597
125 Ga0207667_10522400 3300025949 Bacteria 1202
126 Ga0207677_10057723 3300026023 Bacteria 2667
127 Ga0207708_10202395 3300026075 Bacteria 1584
128 Ga0207702_10049871 3300026078 Bacteria 3533
129 Ga0207702_10120353 3300026078 Unclassified 2349
130 Ga0207702_10590327 3300026078 Bacteria 1089
131 Ga0207702_10860392 3300026078 Bacteria 898
132 Ga0207683_10019682 3300026121 Bacteria 5768
133 Ga0207698_10181280 3300026142 Bacteria 1866
134 Ga0207698_10874076 3300026142 Bacteria 905
135 Ga0207428_10000024 3300027907 Bacteria 265587
136 Ga0316183_1008539 3300030742 Bacteria 1358
137 Ga0316181_1024369 3300030744 Bacteria 917
138 Ga0373936_0137308 3300035113 Unclassified 1054
139 Ga0373933_0502718 3300035724 Unclassified 794
140 Ga0373937_0685001 3300036401 Bacteria 971
141 Ga0395901_0751864 3300038443 Unclassified 968
142 Ga0439465_0016424 3300041413 Bacteria 2309
143 Ga0451793_1031933 3300041452 Bacteria 4659
144 Ga0451833_1271055 3300041491 Bacteria 1645
145 Ga0451841_0325910 3300041498 Bacteria 2382
146 Ga0451845_0375407 3300041501 Bacteria 685
147 Ga0439445_0009304 3300042004 Bacteria 2314
148 Ga0439432_037128 3300042006 Unclassified 1556
149 Ga0439459_0142446 3300042438 Unclassified 621
150 Ga0466966_0230144 3300044684 Bacteria 1118
151 Ga0466961_0111600 3300044693 Bacteria 1720
152 Ga0466961_0163988 3300044693 Bacteria 1384
153 Ga0466963_0054234 3300044694 Bacteria 2664
154 Ga0466963_0077460 3300044694 Bacteria 2246
155 Ga0466963_0248418 3300044694 Bacteria 1248
156 Ga0466957_0007877 3300044842 Bacteria 6042
157 Ga0466958_0002827 3300045836 Bacteria 8835
158 Ga0466967_0024227 3300045976 Bacteria 4987
159 Ga0466967_0124674 3300045976 Bacteria 2385
160 Ga0495641_0022550 3300046461 Bacteria 3147
161 Ga0495618_0429570 3300046514 Unclassified 804
162 Ga0495670_0118042 3300046691 Bacteria 1377
163 Ga0495672_0002261 3300047320 Bacteria 17908
164 Ga0495672_0124269 3300047320 Bacteria 1367
165 Ga0495676_0025486 3300047321 Bacteria 5106
166 Ga0496102_0030147 3300048905 Bacteria 4854
167 Ga0496103_0065254 3300048906 Bacteria 2270
168 Ga0496104_0005470 3300048907 Bacteria 11124
169 Ga0496105_0011296 3300048908 Bacteria 7050
170 Ga0496106_0016157 3300048909 Bacteria 5521
171 Ga0496106_0334441 3300048909 Unclassified 1216
172 Ga0496107_0032418 3300048910 Bacteria 3734
173 Ga0496107_0046975 3300048910 Bacteria 3108
174 Ga0496108_0110465 3300048911 Bacteria 2350
175 Ga0496110_0036637 3300048913 Bacteria 4260
176 Ga0496111_0238515 3300048914 Bacteria 1350
177 Ga0496112_0424292 3300048915 Bacteria 1268
178 Ga0496113_0038747 3300048916 Bacteria 3505
179 Ga0496114_0012341 3300048917 Bacteria 6838
180 Ga0501034_0166620 3300049571 Bacteria 2172
181 Ga0501067_0275357 3300049583 Bacteria 937
182 Ga0501071_0827727 3300049587 Unclassified 714
183 Ga0501075_0152880 3300049591 Bacteria 1759
184 Ga0501075_0338486 3300049591 Bacteria 1147
185 Ga0501083_0119524 3300049744 Bacteria 1729
186 nmdc:mga00v17_302710_c1 3300050491 Bacteria 1038
187 nmdc:mga00v17_439398_c1 3300050491 Unclassified 847
188 nmdc:mga05p37_275731_c1 3300050507 Unclassified 2008
189 nmdc:mga09592_29553_c1 3300050508 Bacteria 4557
190 nmdc:mga08y16_6_c1 3300050511 Bacteria 622294
191 nmdc:mga0n895_323888_c1 3300050512 Bacteria 1562
192 nmdc:mga0rr50_343582_c1 3300050513 Bacteria 1254
193 nmdc:mga0rr50_38584_c1 3300050513 Bacteria 3458
194 nmdc:mga0a205_191151_c1 3300050515 Bacteria 1939
195 Ga0495601_0053099 3300053077 Bacteria 2561
196 Ga0495619_0572758 3300053085 Bacteria 774
197 Ga0501084_0365930 3300054114 Bacteria 1218
198 Ga0501082_0095451 3300060353 Unclassified 2570
199 Ga0501082_0615030 3300060353 Bacteria 951
200 Ga0466962_0010349 3300061719 Bacteria 4482
201 2809196786 2808606439 Bacteria 5952208
202 Ga0070674_100195275
203 Ga0070658_10042693
204 Ga0070658_10044636
205 Ga0070683_100994834
206 Ga0070690_100079226
207 Ga0070680_100061468
208 Ga0070680_100335640
209 Ga0068868_100108255
210 Ga0070660_100046411
211 Ga0070660_100175147
212 Ga0070674_100428452
213 Ga0070673_100407384
214 Ga0070673_100456197
215 Ga0070659_100000554
216 Ga0070659_100427877
217 Ga0070709_10481562
218 Ga0070710_10185345
219 Ga0070711_100009858
220 Ga0070711_100394000
221 Ga0070708_100000318
222 Ga0070708_100007912
223 Ga0070708_100261162
224 Ga0070678_100148083
225 Ga0070681_10191921
226 Ga0070681_10213462
227 Ga0070706_100002099
228 Ga0070706_100146163
229 Ga0070706_100747176
230 Ga0070707_100031409
231 Ga0070707_100076012
232 Ga0070707_100219044
233 Ga0070707_100257364
234 Ga0070707_100413822
235 Ga0070679_100034571
236 Ga0070679_100040463
237 Ga0070679_100434973
238 Ga0070684_100507583
239 Ga0068855_100276090
240 Ga0068855_100280918
241 Ga0068854_100199716
242 Ga0068856_100102719
243 Ga0068852_100339000
244 Ga0068866_10177844
245 Ga0068858_100379473
246 Ga0068860_100584602
247 Ga0070712_100028815
248 Ga0075367_10032683
249 Ga0075370_10052580
250 Ga0075428_100000004
251 Ga0075433_10186253
252 Ga0075434_100058525
253 Ga0075434_100399007
254 Ga0075429_100032198
255 Ga0068865_100083470
256 Ga0075435_100004185
257 Ga0075435_100156156
258 Ga0105240_10068592
259 Ga0111539_10000005
260 Ga0105245_10025582
261 Ga0114129_10315530
262 Ga0114129_10896493
263 Ga0105243_10375025
264 Ga0105242_10277608
265 Ga0105237_10256111
266 Ga0105237_10285542
267 Ga0105237_10319866
268 Ga0105238_10049140
269 Ga0105249_10258300
270 Ga0154019_130497
271 Ga0157373_10372577
272 Ga0157371_10013288
273 Ga0157370_10023534
274 Ga0157369_10020657
275 Ga0157369_10027097
276 Ga0157372_10480708
277 Ga0157372_11102230
278 Ga0157375_10017817
279 Ga0157380_10208943
280 Ga0157380_10699729
281 Ga0157380_10747483
282 Ga0157376_10043237
283 Ga0197907_10228109
284 Ga0197907_11017602
285 Ga0206356_10827037
286 Ga0206349_1520426
287 Ga0206355_1378181
288 Ga0206351_10089236
289 Ga0206352_10619173
290 Ga0206350_10095932
291 Ga0206354_10005608
292 Ga0206353_10282490
293 Ga0154015_1209056
294 Ga0224712_10004133
295 Ga0224712_10371996
296 Ga0207642_10068433
297 Ga0207688_10134568
298 Ga0207705_10680220
299 Ga0207684_10002784
300 Ga0207684_10165959
301 Ga0207684_10565420
302 Ga0207707_10037894
303 Ga0207707_10504373
304 Ga0207671_10616982
305 Ga0207693_10019881
306 Ga0207663_10115849
307 Ga0207660_10133107
308 Ga0207660_10599487
309 Ga0207657_10042548
310 Ga0207657_10360628
311 Ga0207657_10365917
312 Ga0207652_10132830
313 Ga0207652_10511633
314 Ga0207646_10066546
315 Ga0207646_10074213
316 Ga0207646_10176540
317 Ga0207646_10392938
318 Ga0207687_10003659
319 Ga0207664_10948178
320 Ga0207690_10001718
321 Ga0207690_10020075
322 Ga0207686_10160332
323 Ga0207669_10131887
324 Ga0207661_10913063
325 Ga0207667_10315190
326 Ga0207667_10522400
327 Ga0207677_10057723
328 Ga0207708_10202395
329 Ga0207702_10049871
330 Ga0207702_10120353
331 Ga0207702_10590327
332 Ga0207702_10860392
333 Ga0207683_10019682
334 Ga0207698_10181280
335 Ga0207698_10874076
336 Ga0207428_10000024
337 Ga0316183_1008539
338 Ga0316181_1024369
339 Ga0373936_0137308
340 Ga0373933_0502718
341 Ga0373937_0685001
342 Ga0395901_0751864
343 Ga0439465_0016424
344 Ga0451793_1031933
345 Ga0451833_1271055
346 Ga0451841_0325910
347 Ga0451845_0375407
348 Ga0439445_0009304
349 Ga0439432_037128
350 Ga0439459_0142446
351 Ga0466966_0230144
352 Ga0466961_0111600
353 Ga0466961_0163988
354 Ga0466963_0054234
355 Ga0466963_0077460
356 Ga0466963_0248418
357 Ga0466957_0007877
358 Ga0466958_0002827
359 Ga0466967_0024227
360 Ga0466967_0124674
361 Ga0495641_0022550
362 Ga0495618_0429570
363 Ga0495670_0118042
364 Ga0495672_0002261
365 Ga0495672_0124269
366 Ga0495676_0025486
367 Ga0496102_0030147
368 Ga0496103_0065254
369 Ga0496104_0005470
370 Ga0496105_0011296
371 Ga0496106_0016157
372 Ga0496106_0334441
373 Ga0496107_0032418
374 Ga0496107_0046975
375 Ga0496108_0110465
376 Ga0496110_0036637
377 Ga0496111_0238515
378 Ga0496112_0424292
379 Ga0496113_0038747
380 Ga0496114_0012341
381 Ga0501034_0166620
382 Ga0501067_0275357
383 Ga0501071_0827727
384 Ga0501075_0152880
385 Ga0501075_0338486
386 Ga0501083_0119524
387 nmdc:mga00v17_302710_c1
388 nmdc:mga00v17_439398_c1
389 nmdc:mga05p37_275731_c1
390 nmdc:mga09592_29553_c1
391 nmdc:mga08y16_6_c1
392 nmdc:mga0n895_323888_c1
393 nmdc:mga0rr50_343582_c1
394 nmdc:mga0rr50_38584_c1
395 nmdc:mga0a205_191151_c1
396 Ga0495601_0053099
397 Ga0495619_0572758
398 Ga0501084_0365930
399 Ga0501082_0095451
400 Ga0501082_0615030
401 Ga0466962_0010349
402 2809196786

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07040

DUF1326

Protein of unknown function (DUF1326)

57

249

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ffv-assembly1.cif.gz_E carbon monoxide dehydrogenase from hydrogenophaga pseudoflava 0.5479 48 78
4a1n-assembly1.cif.gz_A-2 human mitochondrial endo-exonuclease 0.458 28 76
6iid-assembly1.cif.gz_B human exog-h140a in complex with rna-dna chimeric duplex 0.4556 28 76
6iid-assembly2.cif.gz_D human exog-h140a in complex with rna-dna chimeric duplex 0.4362 28 76
5zki-assembly1.cif.gz_A human exog-h140a in complex with duplex dna 0.4226 28 76
ID Description Score Start End Superfamily
af_Q9W1F4_393_616_3.10.110.10 Alpha Beta;Roll;Ubiquitin Conjugating Enzyme;Ubiquitin Conjugating Enzyme 0.5902 23 76 3.10.110.10
af_F4IAP5_318_484_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.5701 72 116 3.40.50.720
af_O96923_330_451_3.40.20.10 Alpha Beta;3-Layer(aba) Sandwich;Severin;Severin 0.5532 53 116 3.40.20.10
af_A0A0R0KQM5_20_151_3.15.10.20 Alpha Beta;Super Roll;Bactericidal permeability-increasing protein; domain 1;Activator of Hsp90 ATPase Aha1, N-terminal domain 0.5168 31 105 3.15.10.20
af_O94919_49_282_3.40.570.10 Alpha Beta;3-Layer(aba) Sandwich;Extracellular Endonuclease; Chain A;Extracellular Endonuclease, subunit A 0.5149 33 80 3.40.570.10
ID Description Score Start End GO Terms
AF-A0A839RRD9-F1-model_v4 DUF1326 domain-containing protein 0.9859 1 207
AF-A0A839RRD9-F1-model_v4 DUF1326 domain-containing protein 0.9812 1 207
AF-F6EJU5-F1-model_v4 Uncharacterized protein 0.9804 23 206
AF-A0A1F7NAX9-F1-model_v4 DUF1326 domain-containing protein 0.9686 2 197
AF-A8H7U0-F1-model_v4 DUF1326 domain-containing protein 0.9651 2 198

Map