F305543

General Info

Members Datasets Scaffolds Average Seq Length
199 130 398 96

Family's Representative Sequence

Representative Sequence 3300005545|Ga0070695_100212270|Ga0070695_1002122702
Length 115
Sequence MDGLAPVLAKARGAERGPVMATETVDRPRTGGPGSGSGGHWRVIVLNDDHNTFDHVARTLAQVIPTITVEQGYRIADQIHSSGRAIVWSGEREPAELYWEQLNSAGLTMAPLEQS

Samples

Sample ID Description Type Environment
1 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
23 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
24 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
25 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300012482 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510 Metagenome Rhizosphere
41 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
42 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
54 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
55 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
56 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
57 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
58 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
59 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
60 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
68 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
69 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
70 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
71 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
72 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
73 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
74 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
75 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
76 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
77 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
78 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
79 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
82 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
83 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
84 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
85 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
86 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
87 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
88 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
89 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
90 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
91 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
92 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
93 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
94 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
95 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
96 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
97 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
98 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
99 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
100 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
109 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
110 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
111 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
112 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
113 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
115 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
116 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
117 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
118 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
119 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
120 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
121 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
122 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
123 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
124 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
125 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
126 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
127 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
128 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
129 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
130 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.99
Metatranscriptomes 1.01
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.03
Nodule 0
Rhizoplane 7.04
Rhizosphere 86.93
Stem 0
Stem Tuber 0
Unclassified 8.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070695_100212270 3300005545 Bacteria 1390
2 Ga0070683_100456159 3300005329 Bacteria 1220
3 Ga0070660_100010567 3300005339 Bacteria 6524
4 Ga0070660_100791745 3300005339 Bacteria 797
5 Ga0070668_100144355 3300005347 Bacteria 1920
6 Ga0070668_101945094 3300005347 Bacteria 542
7 Ga0070671_100189277 3300005355 Bacteria 1744
8 Ga0070659_100000765 3300005366 Bacteria 23348
9 Ga0070714_100005864 3300005435 Bacteria 9420
10 Ga0070713_100518867 3300005436 Bacteria 1126
11 Ga0070701_10567798 3300005438 Bacteria 747
12 Ga0070705_100002785 3300005440 Bacteria 8711
13 Ga0070700_100419493 3300005441 Unclassified 1011
14 Ga0068867_100987365 3300005459 Bacteria 763
15 Ga0070684_100345716 3300005535 Bacteria 1367
16 Ga0070684_100856739 3300005535 Bacteria 851
17 Ga0070686_101559318 3300005544 Bacteria 558
18 Ga0070696_100887194 3300005546 Unclassified 739
19 Ga0070704_100079390 3300005549 Bacteria 2410
20 Ga0068856_101884652 3300005614 Bacteria 609
21 Ga0070702_100486027 3300005615 Bacteria 903
22 Ga0081455_10156328 3300005937 Bacteria 1752
23 Ga0081455_10261511 3300005937 Bacteria 1260
24 Ga0070717_10000013 3300006028 Bacteria 228046
25 Ga0075365_10000254 3300006038 Bacteria 18312
26 Ga0075368_10277918 3300006042 Bacteria 719
27 Ga0075364_10073425 3300006051 Bacteria 2255
28 Ga0075364_10516170 3300006051 Bacteria 817
29 Ga0075432_10229647 3300006058 Bacteria 745
30 Ga0075367_10171417 3300006178 Bacteria 1352
31 Ga0075367_10494691 3300006178 Bacteria 776
32 Ga0075428_100031418 3300006844 Bacteria 5870
33 Ga0075428_100101811 3300006844 Bacteria 3131
34 Ga0075430_100115220 3300006846 Bacteria 2239
35 Ga0075430_101309557 3300006846 Bacteria 596
36 Ga0075431_100001567 3300006847 Bacteria 21238
37 Ga0075431_102056492 3300006847 Bacteria 526
38 Ga0075433_10008415 3300006852 Bacteria 8232
39 Ga0075433_10111759 3300006852 Archaea 2424
40 Ga0075434_100001678 3300006871 Bacteria 18909
41 Ga0075434_100022104 3300006871 Bacteria 6194
42 Ga0075429_100006123 3300006880 Bacteria 10397
43 Ga0075429_100672283 3300006880 Bacteria 907
44 Ga0075435_100266486 3300007076 Archaea 1460
45 Ga0105240_10088995 3300009093 Bacteria 3777
46 Ga0111539_10005066 3300009094 Bacteria 17115
47 Ga0111539_11088371 3300009094 Bacteria 929
48 Ga0111539_11112942 3300009094 Bacteria 918
49 Ga0111539_11768776 3300009094 Bacteria 717
50 Ga0114129_10006865 3300009147 Bacteria 16187
51 Ga0114129_10009113 3300009147 Bacteria 14146
52 Ga0114129_10147639 3300009147 Bacteria 3220
53 Ga0114129_10952885 3300009147 Bacteria 1084
54 Ga0114129_11533417 3300009147 Bacteria 818
55 Ga0105243_10526221 3300009148 Bacteria 1125
56 Ga0105242_11096671 3300009176 Unclassified 810
57 Ga0105249_10703113 3300009553 Unclassified 1071
58 Ga0105239_10329505 3300010375 Bacteria 1722
59 Ga0157318_1015722 3300012482 Bacteria 621
60 Ga0157377_11132507 3300014745 Bacteria 601
61 Ga0206349_1317343 3300020075 Bacteria 1602
62 Ga0206353_10574531 3300020082 Bacteria 557
63 Ga0207645_10525397 3300025907 Bacteria 802
64 Ga0207646_10305192 3300025922 Bacteria 1438
65 Ga0207664_10000046 3300025929 Bacteria 140749
66 Ga0207664_10003020 3300025929 Bacteria 11190
67 Ga0207686_11146704 3300025934 Bacteria 635
68 Ga0207670_10952346 3300025936 Unclassified 721
69 Ga0207704_11237814 3300025938 Bacteria 637
70 Ga0207704_11265985 3300025938 Unclassified 630
71 Ga0207661_10869046 3300025944 Bacteria 830
72 Ga0207712_10902305 3300025961 Bacteria 781
73 Ga0207712_11671322 3300025961 Bacteria 571
74 Ga0207708_11180031 3300026075 Unclassified 669
75 Ga0207428_10053592 3300027907 Bacteria 3216
76 Ga0307408_100712856 3300031548 Bacteria 903
77 Ga0307408_101908229 3300031548 Bacteria 570
78 Ga0307405_10288173 3300031731 Bacteria 1240
79 Ga0307405_10358412 3300031731 Unclassified 1127
80 Ga0307413_11714505 3300031824 Bacteria 560
81 Ga0307410_10093085 3300031852 Bacteria 2144
82 Ga0307406_10303278 3300031901 Bacteria 1228
83 Ga0307406_10399894 3300031901 Unclassified 1088
84 Ga0307407_10423107 3300031903 Unclassified 960
85 Ga0307412_10065708 3300031911 Bacteria 2456
86 Ga0307409_100064158 3300031995 Bacteria 2884
87 Ga0307409_100353141 3300031995 Bacteria 1388
88 Ga0307409_100874093 3300031995 Bacteria 911
89 Ga0307416_100033522 3300032002 Bacteria 3894
90 Ga0307416_100097794 3300032002 Bacteria 2543
91 Ga0307416_100132108 3300032002 Bacteria 2250
92 Ga0307411_10039530 3300032005 Bacteria 2985
93 Ga0307415_100365894 3300032126 Bacteria 1219
94 Ga0395900_0044868 3300037418 Bacteria 4553
95 Ga0395900_0633984 3300037418 Bacteria 1007
96 Ga0395898_0006958 3300037466 Bacteria 12021
97 Ga0395905_0102108 3300037471 Bacteria 2692
98 Ga0436364_1269701 3300037853 Bacteria 727
99 Ga0395901_0486462 3300038443 Bacteria 1258
100 Ga0395901_0492764 3300038443 Bacteria 1248
101 Ga0395901_0708184 3300038443 Bacteria 1004
102 Ga0395901_1533611 3300038443 Bacteria 621
103 Ga0451797_0245955 3300041453 Bacteria 692
104 Ga0451841_0206757 3300041498 Bacteria 576
105 Ga0450923_183483 3300042125 Bacteria 516
106 Ga0466966_0199762 3300044684 Bacteria 1210
107 Ga0466961_0163309 3300044693 Bacteria 1388
108 Ga0466963_0011992 3300044694 Bacteria 5294
109 Ga0466963_0062514 3300044694 Bacteria 2490
110 Ga0466971_0279296 3300044719 Bacteria 799
111 Ga0466968_0142412 3300044735 Bacteria 1097
112 Ga0466957_0123039 3300044842 Bacteria 1655
113 Ga0466957_0168932 3300044842 Bacteria 1424
114 Ga0466957_0237573 3300044842 Bacteria 1208
115 Ga0466960_0026043 3300044901 Bacteria 2652
116 Ga0466960_0509817 3300044901 Bacteria 706
117 Ga0466967_0090375 3300045976 Bacteria 2781
118 Ga0466967_0164359 3300045976 Bacteria 2085
119 Ga0466967_0695523 3300045976 Bacteria 1007
120 Ga0466967_0933993 3300045976 Bacteria 863
121 Ga0466967_1492510 3300045976 Bacteria 673
122 Ga0466967_2063505 3300045976 Bacteria 567
123 Ga0495590_0283501 3300046457 Bacteria 621
124 Ga0495653_0705518 3300046463 Bacteria 612
125 Ga0495596_0214063 3300046500 Bacteria 748
126 Ga0495644_0020961 3300046523 Bacteria 2494
127 Ga0495609_0059798 3300046538 Bacteria 1685
128 Ga0495645_0231136 3300046543 Bacteria 1239
129 Ga0495656_0065034 3300046615 Bacteria 1603
130 Ga0495589_0280944 3300046794 Bacteria 774
131 Ga0495589_0393778 3300046794 Bacteria 636
132 Ga0495660_0359287 3300046810 Bacteria 646
133 Ga0495604_0001012 3300047317 Bacteria 23396
134 Ga0495626_0312667 3300048091 Bacteria 619
135 Ga0496100_0269323 3300048903 Bacteria 1266
136 Ga0496102_0856169 3300048905 Bacteria 831
137 Ga0496102_1134075 3300048905 Bacteria 702
138 Ga0496107_0268895 3300048910 Bacteria 1269
139 Ga0496109_0104304 3300048912 Bacteria 2632
140 Ga0496109_1356559 3300048912 Bacteria 647
141 Ga0496110_0931326 3300048913 Bacteria 775
142 Ga0496111_0120470 3300048914 Bacteria 1938
143 Ga0496112_0062813 3300048915 Bacteria 3664
144 Ga0496112_0506121 3300048915 Bacteria 1143
145 Ga0496112_0911393 3300048915 Bacteria 801
146 Ga0496113_0173199 3300048916 Bacteria 1710
147 Ga0496113_1184035 3300048916 Bacteria 597
148 Ga0501031_1089427 3300049568 Bacteria 510
149 Ga0501036_0519175 3300049572 Bacteria 991
150 Ga0501039_0780942 3300049575 Unclassified 745
151 Ga0501040_0527049 3300049576 Bacteria 852
152 Ga0501041_1010520 3300049577 Bacteria 535
153 Ga0501041_1032685 3300049577 Unclassified 529
154 Ga0501042_0945331 3300049578 Bacteria 628
155 Ga0501046_0135061 3300049580 Bacteria 1869
156 Ga0501046_0874364 3300049580 Bacteria 628
157 Ga0501048_0239114 3300049582 Bacteria 1289
158 Ga0501048_1115582 3300049582 Bacteria 567
159 Ga0501068_0385021 3300049584 Bacteria 903
160 Ga0501074_0942493 3300049590 Bacteria 607
161 Ga0501076_0298096 3300049592 Bacteria 1321
162 Ga0501076_0751541 3300049592 Bacteria 805
163 Ga0501076_1238715 3300049592 Bacteria 614
164 Ga0501077_0734825 3300049593 Bacteria 634
165 Ga0501079_0098158 3300049741 Bacteria 2271
166 Ga0501035_0440832 3300049822 Bacteria 1079
167 Ga0501035_0956942 3300049822 Bacteria 675
168 Ga0501045_0061312 3300049824 Bacteria 2759
169 nmdc:mga00v17_15328_c1 3300050491 Bacteria 4302
170 nmdc:mga0yw44_3349_c1 3300050492 Bacteria 7102
171 nmdc:mga06z11_342370_c1 3300050494 Bacteria 894
172 nmdc:mga06z11_612589_c1 3300050494 Bacteria 662
173 nmdc:mga05p37_262124_c1 3300050507 Unclassified 2068
174 nmdc:mga05p37_422289_c1 3300050507 Bacteria 1551
175 nmdc:mga05p37_83763_c1 3300050507 Bacteria 1245
176 nmdc:mga09592_1237991_c1 3300050508 Bacteria 616
177 nmdc:mga09592_466088_c1 3300050508 Bacteria 1089
178 nmdc:mga0qj67_564167_c1 3300050509 Bacteria 913
179 nmdc:mga0qj67_717669_c1 3300050509 Bacteria 794
180 nmdc:mga06r32_1827525_c1 3300050510 Bacteria 543
181 nmdc:mga06r32_67474_c1 3300050510 Bacteria 3454
182 nmdc:mga06r32_9219_c1 3300050510 Bacteria 8897
183 nmdc:mga08y16_594475_c1 3300050511 Bacteria 1116
184 nmdc:mga08y16_9469_c1 3300050511 Bacteria 10222
185 nmdc:mga0n895_289607_c1 3300050512 Bacteria 1660
186 nmdc:mga0n895_358275_c1 3300050512 Bacteria 1477
187 nmdc:mga0n895_3781_c1 3300050512 Bacteria 12256
188 nmdc:mga0n895_443089_c1 3300050512 Unclassified 1312
189 nmdc:mga0rr50_534484_c1 3300050513 Bacteria 998
190 nmdc:mga0rr50_856033_c1 3300050513 Unclassified 775
191 nmdc:mga0a205_11663_c1 3300050515 Bacteria 8103
192 nmdc:mga0a205_570221_c1 3300050515 Bacteria 986
193 nmdc:mga0a205_98154_c1 3300050515 Bacteria 2828
194 Ga0495595_0418608 3300053084 Unclassified 680
195 Ga0501084_0141763 3300054114 Bacteria 2024
196 Ga0501084_0483334 3300054114 Bacteria 1047
197 Ga0501082_0612666 3300060353 Bacteria 953
198 Ga0466962_0624139 3300061719 Bacteria 550
199 Ga0530510_0060860 3300061734 Bacteria 2733
200 Ga0070695_100212270
201 Ga0070683_100456159
202 Ga0070660_100010567
203 Ga0070660_100791745
204 Ga0070668_100144355
205 Ga0070668_101945094
206 Ga0070671_100189277
207 Ga0070659_100000765
208 Ga0070714_100005864
209 Ga0070713_100518867
210 Ga0070701_10567798
211 Ga0070705_100002785
212 Ga0070700_100419493
213 Ga0068867_100987365
214 Ga0070684_100345716
215 Ga0070684_100856739
216 Ga0070686_101559318
217 Ga0070696_100887194
218 Ga0070704_100079390
219 Ga0068856_101884652
220 Ga0070702_100486027
221 Ga0081455_10156328
222 Ga0081455_10261511
223 Ga0070717_10000013
224 Ga0075365_10000254
225 Ga0075368_10277918
226 Ga0075364_10073425
227 Ga0075364_10516170
228 Ga0075432_10229647
229 Ga0075367_10171417
230 Ga0075367_10494691
231 Ga0075428_100031418
232 Ga0075428_100101811
233 Ga0075430_100115220
234 Ga0075430_101309557
235 Ga0075431_100001567
236 Ga0075431_102056492
237 Ga0075433_10008415
238 Ga0075433_10111759
239 Ga0075434_100001678
240 Ga0075434_100022104
241 Ga0075429_100006123
242 Ga0075429_100672283
243 Ga0075435_100266486
244 Ga0105240_10088995
245 Ga0111539_10005066
246 Ga0111539_11088371
247 Ga0111539_11112942
248 Ga0111539_11768776
249 Ga0114129_10006865
250 Ga0114129_10009113
251 Ga0114129_10147639
252 Ga0114129_10952885
253 Ga0114129_11533417
254 Ga0105243_10526221
255 Ga0105242_11096671
256 Ga0105249_10703113
257 Ga0105239_10329505
258 Ga0157318_1015722
259 Ga0157377_11132507
260 Ga0206349_1317343
261 Ga0206353_10574531
262 Ga0207645_10525397
263 Ga0207646_10305192
264 Ga0207664_10000046
265 Ga0207664_10003020
266 Ga0207686_11146704
267 Ga0207670_10952346
268 Ga0207704_11237814
269 Ga0207704_11265985
270 Ga0207661_10869046
271 Ga0207712_10902305
272 Ga0207712_11671322
273 Ga0207708_11180031
274 Ga0207428_10053592
275 Ga0307408_100712856
276 Ga0307408_101908229
277 Ga0307405_10288173
278 Ga0307405_10358412
279 Ga0307413_11714505
280 Ga0307410_10093085
281 Ga0307406_10303278
282 Ga0307406_10399894
283 Ga0307407_10423107
284 Ga0307412_10065708
285 Ga0307409_100064158
286 Ga0307409_100353141
287 Ga0307409_100874093
288 Ga0307416_100033522
289 Ga0307416_100097794
290 Ga0307416_100132108
291 Ga0307411_10039530
292 Ga0307415_100365894
293 Ga0395900_0044868
294 Ga0395900_0633984
295 Ga0395898_0006958
296 Ga0395905_0102108
297 Ga0436364_1269701
298 Ga0395901_0486462
299 Ga0395901_0492764
300 Ga0395901_0708184
301 Ga0395901_1533611
302 Ga0451797_0245955
303 Ga0451841_0206757
304 Ga0450923_183483
305 Ga0466966_0199762
306 Ga0466961_0163309
307 Ga0466963_0011992
308 Ga0466963_0062514
309 Ga0466971_0279296
310 Ga0466968_0142412
311 Ga0466957_0123039
312 Ga0466957_0168932
313 Ga0466957_0237573
314 Ga0466960_0026043
315 Ga0466960_0509817
316 Ga0466967_0090375
317 Ga0466967_0164359
318 Ga0466967_0695523
319 Ga0466967_0933993
320 Ga0466967_1492510
321 Ga0466967_2063505
322 Ga0495590_0283501
323 Ga0495653_0705518
324 Ga0495596_0214063
325 Ga0495644_0020961
326 Ga0495609_0059798
327 Ga0495645_0231136
328 Ga0495656_0065034
329 Ga0495589_0280944
330 Ga0495589_0393778
331 Ga0495660_0359287
332 Ga0495604_0001012
333 Ga0495626_0312667
334 Ga0496100_0269323
335 Ga0496102_0856169
336 Ga0496102_1134075
337 Ga0496107_0268895
338 Ga0496109_0104304
339 Ga0496109_1356559
340 Ga0496110_0931326
341 Ga0496111_0120470
342 Ga0496112_0062813
343 Ga0496112_0506121
344 Ga0496112_0911393
345 Ga0496113_0173199
346 Ga0496113_1184035
347 Ga0501031_1089427
348 Ga0501036_0519175
349 Ga0501039_0780942
350 Ga0501040_0527049
351 Ga0501041_1010520
352 Ga0501041_1032685
353 Ga0501042_0945331
354 Ga0501046_0135061
355 Ga0501046_0874364
356 Ga0501048_0239114
357 Ga0501048_1115582
358 Ga0501068_0385021
359 Ga0501074_0942493
360 Ga0501076_0298096
361 Ga0501076_0751541
362 Ga0501076_1238715
363 Ga0501077_0734825
364 Ga0501079_0098158
365 Ga0501035_0440832
366 Ga0501035_0956942
367 Ga0501045_0061312
368 nmdc:mga00v17_15328_c1
369 nmdc:mga0yw44_3349_c1
370 nmdc:mga06z11_342370_c1
371 nmdc:mga06z11_612589_c1
372 nmdc:mga05p37_262124_c1
373 nmdc:mga05p37_422289_c1
374 nmdc:mga05p37_83763_c1
375 nmdc:mga09592_1237991_c1
376 nmdc:mga09592_466088_c1
377 nmdc:mga0qj67_564167_c1
378 nmdc:mga0qj67_717669_c1
379 nmdc:mga06r32_1827525_c1
380 nmdc:mga06r32_67474_c1
381 nmdc:mga06r32_9219_c1
382 nmdc:mga08y16_594475_c1
383 nmdc:mga08y16_9469_c1
384 nmdc:mga0n895_289607_c1
385 nmdc:mga0n895_358275_c1
386 nmdc:mga0n895_3781_c1
387 nmdc:mga0n895_443089_c1
388 nmdc:mga0rr50_534484_c1
389 nmdc:mga0rr50_856033_c1
390 nmdc:mga0a205_11663_c1
391 nmdc:mga0a205_570221_c1
392 nmdc:mga0a205_98154_c1
393 Ga0495595_0418608
394 Ga0501084_0141763
395 Ga0501084_0483334
396 Ga0501082_0612666
397 Ga0466962_0624139
398 Ga0530510_0060860

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02617

ClpS

ATP-dependent Clp protease adaptor protein ClpS

37

114

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7d34-assembly1.cif.gz_B atclps1-peptide complex 0.9348 17 93
4o2x-assembly1.cif.gz_A structure of a malarial protein 0.9167 20 95
4o2x-assembly2.cif.gz_B structure of a malarial protein 0.9122 19 93
2wa8-assembly2.cif.gz_C structural basis of n-end rule substrate recognition in escherichia coli by the clpap adaptor protein clps - the phe peptide structure 0.8946 20 95
3o2b-assembly1.cif.gz_A e. coli clps in complex with a phe n-end rule peptide 0.8945 20 95
ID Description Score Start End Superfamily
af_Q8IEB2_84_184_3.30.1390.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein L30; Chain: A,;Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS 0.9509 19 94 3.30.1390.10
af_A0A0R0IJ84_76_154_3.30.1390.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein L30; Chain: A,;Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS 0.9504 20 93 3.30.1390.10
af_A0A0R0IJ84_76_154_3.30.1390.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein L30; Chain: A,;Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS 0.8705 20 93 3.30.1390.10
3o1fA00 Alpha Beta;2-Layer Sandwich;Ribosomal Protein L30; Chain: A,;Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS 0.8584 20 95 3.30.1390.10
4ykaD00 Alpha Beta;2-Layer Sandwich;Ribosomal Protein L30; Chain: A,;Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS 0.8525 20 93 3.30.1390.10
ID Description Score Start End GO Terms
AF-A0A4P5VM14-F1-model_v4 ATP-dependent Clp protease adapter protein ClpS 0.9784 20 95 GO:0006508
GO:0008233
GO:0030163
AF-A0A2W4VXJ9-F1-model_v4 Clp protease ClpS 0.9676 23 95 GO:0006508
GO:0008233
GO:0030163
AF-U6MKK3-F1-model_v4 ATP-dependent Clp protease adaptor domain-containing protein, putative 0.9568 19 94 GO:0006508
GO:0008233
GO:0030163
AF-Q7RHW1-F1-model_v4 Adaptor protein ClpS core domain-containing protein 0.9559 21 94 GO:0006508
GO:0030163
AF-A0A7S1BRN6-F1-model_v4 Adaptor protein ClpS core domain-containing protein 0.9557 21 93 GO:0006508
GO:0030163

Map