F304825

General Info

Members Datasets Scaffolds Average Seq Length
198 128 396 439

Family's Representative Sequence

Representative Sequence 3300045976|Ga0466967_0095375|Ga0466967_0095375_1210_2652
Length 462
Sequence MGIYQHFRVPTPAAAEPDSWSTRPVGDNAEVHSDQSTRESAAWFERARAVTPGGVNSPVRAFNAVGGTPRFIASAEGAWLTDVDGNEYVDLVCSWGPMLLGHAHPEVQAAVQEAVARGTSYGTPTRSEVELAEEIVARTPVERVRLVSSGTEATMSAIRLARGFTGRDLVVKFAGCYHGHVDSLLAEAGSGLATHAVPTEATLVLPYNDTAAVEKAFAERGDEIACLITEASPGNMGIVPPAPGFNAFLAETCARHGALFVSDEVMTGFRVSPRGQWGLDGAREGWTPDLMTFGKVMGGGFPAAAFGGRADVMAMLSPEGPVYQAGTLSGNPVATTAGLTTLRLATAEVYAHVDRVAATISAAAGEALTAAGVPHVVQAGGNMFSVFFTPEGTTEVPDFATASSQDTAVFKAFFHAMLERGVYLPPSAFEAWFCSAAHDDRAVQQVLDALPQAARSTTGAER

Samples

Sample ID Description Type Environment
1 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003285 Grassland soil microbial communities from Hopland, California, USA - Sample H3_Rhizo_39 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
13 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
14 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
15 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
16 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
19 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
23 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
27 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
28 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
29 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
38 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
39 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
40 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
41 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
42 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
43 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
44 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
45 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
46 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
47 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
48 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
49 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
50 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
51 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
52 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
53 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
54 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
55 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
56 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
57 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
58 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
59 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
60 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
61 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
62 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
63 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
64 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
65 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
66 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
67 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
68 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
69 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
83 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
84 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
85 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
86 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
87 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
88 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
89 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
90 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
91 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
94 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
95 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
96 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
97 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
98 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
99 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
100 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
101 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
102 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
103 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
104 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
105 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
106 2643221561 Nocardioides sp. Root151 Isolate Unclassified
107 2643221576 Nocardioides sp. Root614 Isolate Unclassified
108 2643221590 Nocardioides sp. Root682 Isolate Unclassified
109 2643221604 Nocardioides sp. Root190 Isolate Unclassified
110 2643221615 Nocardioides sp. Root224 Isolate Unclassified
111 2643221617 Nocardioides sp. Root79 Isolate Unclassified
112 2643221620 Nocardioides sp. Root240 Isolate Unclassified
113 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
114 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
115 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
116 2643221696 Nocardioides sp. Root140 Isolate Unclassified
117 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
118 2738541305 Nocardioides sp. CF167 Isolate Unclassified
119 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
120 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
121 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
122 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
123 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
124 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
125 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
126 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
127 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
128 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 87.37
Metatranscriptomes 1.01
Isolates 11.62

Biome Distribution

Category Percentage (%)
Aerial Root 1.01
Bulb 0
Endosphere 12.63
Nodule 0
Rhizoplane 3.54
Rhizosphere 70.2
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466967_0095375 3300045976 Bacteria 2711
2 LJQas_1000791 3300000549 Bacteria 5002
3 Ga0007423J48922_100687 3300003285 Bacteria 3640
4 Ga0068868_100025987 3300005338 Bacteria 4459
5 Ga0070660_100207342 3300005339 Bacteria 1591
6 Ga0070688_100108364 3300005365 Bacteria 1843
7 Ga0070659_100011276 3300005366 Bacteria 6604
8 Ga0070700_100002994 3300005441 Bacteria 8672
9 Ga0070700_100027763 3300005441 Bacteria 3360
10 Ga0070698_100046369 3300005471 Bacteria 4444
11 Ga0070684_100009885 3300005535 Bacteria 7538
12 Ga0081455_10000671 3300005937 Bacteria 44288
13 Ga0081539_10012562 3300005985 Bacteria 6505
14 Ga0075365_10010835 3300006038 Bacteria 5332
15 Ga0075365_10026808 3300006038 Bacteria 3661
16 Ga0075365_10051981 3300006038 Bacteria 2708
17 Ga0075365_10069768 3300006038 Bacteria 2362
18 Ga0075365_10145396 3300006038 Bacteria 1647
19 Ga0075368_10001337 3300006042 Bacteria 7837
20 Ga0075363_100003644 3300006048 Bacteria 6608
21 Ga0075363_100037360 3300006048 Bacteria 2551
22 Ga0075364_10021705 3300006051 Bacteria 4048
23 Ga0075364_10050146 3300006051 Bacteria 2724
24 Ga0075367_10001229 3300006178 Bacteria 10757
25 Ga0075367_10028540 3300006178 Bacteria 3185
26 Ga0075370_10030133 3300006353 Bacteria 3026
27 Ga0068865_100005614 3300006881 Bacteria 7613
28 Ga0111539_10021329 3300009094 Bacteria 7975
29 Ga0105245_10007753 3300009098 Bacteria 9401
30 Ga0105243_10012659 3300009148 Bacteria 6373
31 Ga0105248_10022398 3300009177 Bacteria 7009
32 Ga0105238_10052932 3300009551 Bacteria 4080
33 Ga0105249_10020589 3300009553 Bacteria 5898
34 Ga0157375_10082813 3300013308 Bacteria 3251
35 Ga0157377_10008895 3300014745 Bacteria 4913
36 Ga0206353_10709655 3300020082 Bacteria 3238
37 Ga0207694_10079895 3300025924 Bacteria 2566
38 Ga0207687_10014654 3300025927 Bacteria 5133
39 Ga0207709_10017971 3300025935 Bacteria 3955
40 Ga0207691_10000686 3300025940 Bacteria 33446
41 Ga0207678_10038799 3300026067 Bacteria 4136
42 Ga0207708_10000075 3300026075 Bacteria 78540
43 Ga0207708_10015138 3300026075 Bacteria 5778
44 Ga0207648_10001457 3300026089 Bacteria 26045
45 Ga0268264_10000193 3300028381 Bacteria 126247
46 Ga0316181_1175238 3300030744 Bacteria 2601
47 Ga0316182_1122309 3300030745 Bacteria 5996
48 Ga0307405_10012949 3300031731 Bacteria 4436
49 Ga0307406_10051675 3300031901 Bacteria 2611
50 Ga0307409_100007792 3300031995 Bacteria 6441
51 Ga0307409_100018664 3300031995 Bacteria 4672
52 Ga0307416_100016549 3300032002 Bacteria 5130
53 Ga0307416_100032476 3300032002 Bacteria 3945
54 Ga0307415_100000142 3300032126 Bacteria 31723
55 Ga0395900_0006602 3300037418 Bacteria 12073
56 Ga0395900_0034840 3300037418 Bacteria 5186
57 Ga0395898_0042111 3300037466 Bacteria 4507
58 Ga0395898_0046595 3300037466 Bacteria 4259
59 Ga0436364_1227070 3300037853 Bacteria 2470
60 Ga0395901_0103910 3300038443 Bacteria 2981
61 Ga0395901_0132651 3300038443 Bacteria 2617
62 Ga0439465_0011517 3300041413 Bacteria 2776
63 Ga0451833_0207307 3300041491 Bacteria 4889
64 Ga0451833_0595649 3300041491 Bacteria 4994
65 Ga0451837_0345621 3300041494 Bacteria 20699
66 Ga0451839_0594583 3300041496 Bacteria 3726
67 Ga0439431_0016542 3300041997 Bacteria 1727
68 Ga0439445_0002943 3300042004 Bacteria 3803
69 Ga0439446_0001100 3300042156 Bacteria 5981
70 Ga0439434_0002801 3300042435 Bacteria 5087
71 Ga0439464_0006178 3300042439 Bacteria 3115
72 Ga0466961_0036524 3300044693 Bacteria 3153
73 Ga0466963_0127012 3300044694 Bacteria 1758
74 Ga0466963_0135223 3300044694 Bacteria 1705
75 Ga0466970_0003320 3300044765 Bacteria 7822
76 Ga0466970_0007753 3300044765 Bacteria 5386
77 Ga0466970_0020545 3300044765 Bacteria 3432
78 Ga0466970_0063402 3300044765 Bacteria 1981
79 Ga0466957_0019049 3300044842 Bacteria 4035
80 Ga0466957_0067784 3300044842 Bacteria 2202
81 Ga0466960_0001372 3300044901 Bacteria 8857
82 Ga0466960_0002684 3300044901 Bacteria 6720
83 Ga0466960_0012604 3300044901 Bacteria 3573
84 Ga0466960_0051568 3300044901 Bacteria 1988
85 Ga0466958_0079430 3300045836 Bacteria 2017
86 Ga0466967_0034192 3300045976 Bacteria 4312
87 Ga0466967_0144235 3300045976 Bacteria 2220
88 Ga0466967_0181994 3300045976 Bacteria 1983
89 Ga0495608_0049791 3300046511 Bacteria 2781
90 Ga0496101_0102424 3300048904 Bacteria 2144
91 Ga0496106_0144691 3300048909 Bacteria 1872
92 Ga0496108_0113392 3300048911 Bacteria 2320
93 Ga0496109_0088571 3300048912 Bacteria 2861
94 Ga0496109_0129162 3300048912 Bacteria 2358
95 Ga0496109_0195301 3300048912 Bacteria 1902
96 Ga0496114_0148857 3300048917 Bacteria 2030
97 Ga0501032_0000035 3300049569 Bacteria 117554
98 Ga0501032_0017647 3300049569 Bacteria 5009
99 Ga0501032_0052363 3300049569 Bacteria 2750
100 Ga0501033_0001137 3300049570 Bacteria 24072
101 Ga0501033_0056176 3300049570 Bacteria 2910
102 Ga0501034_0000925 3300049571 Bacteria 42868
103 Ga0501034_0017099 3300049571 Bacteria 7439
104 Ga0501034_0041416 3300049571 Bacteria 4660
105 Ga0501036_0000080 3300049572 Bacteria 59831
106 Ga0501036_0002018 3300049572 Bacteria 15794
107 Ga0501036_0010750 3300049572 Bacteria 7567
108 Ga0501037_0000370 3300049573 Bacteria 37472
109 Ga0501037_0004313 3300049573 Bacteria 10316
110 Ga0501037_0022388 3300049573 Bacteria 4675
111 Ga0501038_0000172 3300049574 Bacteria 55198
112 Ga0501038_0007064 3300049574 Bacteria 10368
113 Ga0501038_0009084 3300049574 Bacteria 9124
114 Ga0501038_0026500 3300049574 Bacteria 5162
115 Ga0501039_0000269 3300049575 Bacteria 37904
116 Ga0501039_0003905 3300049575 Bacteria 11196
117 Ga0501040_0018654 3300049576 Bacteria 4607
118 Ga0501040_0116797 3300049576 Bacteria 1869
119 Ga0501042_0157648 3300049578 Bacteria 1637
120 Ga0501043_0000231 3300049579 Bacteria 50898
121 Ga0501043_0010396 3300049579 Bacteria 7293
122 Ga0501043_0031578 3300049579 Bacteria 4163
123 Ga0501046_0000279 3300049580 Bacteria 51800
124 Ga0501046_0000707 3300049580 Bacteria 32240
125 Ga0501046_0017695 3300049580 Bacteria 5944
126 Ga0501046_0153054 3300049580 Bacteria 1739
127 Ga0501046_0200433 3300049580 Bacteria 1485
128 Ga0501047_0000458 3300049581 Bacteria 45091
129 Ga0501047_0015908 3300049581 Bacteria 7170
130 Ga0501047_0027994 3300049581 Bacteria 5431
131 Ga0501047_0118906 3300049581 Bacteria 2524
132 Ga0501048_0000048 3300049582 Bacteria 59433
133 Ga0501048_0007429 3300049582 Bacteria 8308
134 Ga0501048_0015028 3300049582 Bacteria 5722
135 Ga0501067_0003422 3300049583 Bacteria 8733
136 Ga0501067_0042291 3300049583 Bacteria 2530
137 Ga0501067_0043525 3300049583 Bacteria 2494
138 Ga0501068_0017637 3300049584 Bacteria 4130
139 Ga0501069_0000330 3300049585 Bacteria 21345
140 Ga0501070_0000504 3300049586 Bacteria 35626
141 Ga0501070_0015656 3300049586 Bacteria 6376
142 Ga0501070_0144360 3300049586 Bacteria 1965
143 Ga0501071_0000648 3300049587 Bacteria 18142
144 Ga0501071_0192190 3300049587 Bacteria 1531
145 Ga0501074_0000061 3300049590 Bacteria 53799
146 Ga0501074_0061573 3300049590 Bacteria 2704
147 Ga0501074_0099610 3300049590 Bacteria 2080
148 Ga0501077_0023650 3300049593 Bacteria 3896
149 Ga0501080_0000160 3300049742 Bacteria 48505
150 Ga0501080_0019670 3300049742 Bacteria 6254
151 Ga0501080_0020267 3300049742 Bacteria 6155
152 Ga0501083_0009694 3300049744 Bacteria 6803
153 Ga0501083_0064455 3300049744 Bacteria 2442
154 Ga0501035_0000404 3300049822 Bacteria 49157
155 Ga0501035_0077645 3300049822 Bacteria 2934
156 Ga0501044_0000439 3300049823 Bacteria 50915
157 Ga0501044_0057277 3300049823 Bacteria 3999
158 Ga0501044_0232275 3300049823 Bacteria 1791
159 Ga0501045_0017348 3300049824 Bacteria 5110
160 nmdc:mga03n38_20818_c1 3300050490 Bacteria 2630
161 nmdc:mga03n38_8768_c1 3300050490 Bacteria 3645
162 nmdc:mga0yw44_13803_c1 3300050492 Bacteria 4267
163 nmdc:mga0yw44_163728_c1 3300050492 Bacteria 1457
164 nmdc:mga0yw44_44389_c1 3300050492 Bacteria 2658
165 nmdc:mga0yw44_85948_c1 3300050492 Bacteria 1980
166 nmdc:mga06z11_16871_c1 3300050494 Bacteria 3301
167 nmdc:mga04h51_19586_c1 3300050495 Bacteria 2009
168 nmdc:mga08y16_33838_c1 3300050511 Bacteria 5368
169 Ga0500644_0000104 3300053088 Bacteria 53398
170 Ga0500556_0001381 3300053104 Bacteria 10603
171 Ga0500593_000791 3300053117 Bacteria 11816
172 Ga0500573_0008453 3300053140 Bacteria 5669
173 Ga0501084_0003359 3300054114 Bacteria 12966
174 Ga0501082_0043210 3300060353 Bacteria 3885
175 Ga0466962_0047776 3300061719 Bacteria 2045
176 2643824710 2643221561 Bacteria 4984412
177 2643892893 2643221576 Bacteria 5214352
178 2643962342 2643221590 Bacteria 5214697
179 2644032073 2643221604 Bacteria 5014917
180 2644093126 2643221615 Bacteria 5487866
181 2644100482 2643221617 Bacteria 5139111
182 2644116890 2643221620 Bacteria 5134593
183 2644322737 2643221657 Bacteria 5490246
184 2644505790 2643221690 Bacteria 4654705
185 2644524372 2643221694 Bacteria 4392972
186 2644535962 2643221696 Bacteria 5431823
187 2644668473 2643221722 Bacteria 4247614
188 2738871174 2738541305 Bacteria 4910150
189 2774395005 2773857762 Bacteria 5971770
190 2809194147 2808606439 Bacteria 5952208
191 2812334871 2811994874 Bacteria 5367947
192 2812348896 2811994878 Bacteria 5992952
193 2855388100 2855386786 Bacteria 4752232
194 2857484845 2857481737 Bacteria 4761446
195 2884997711 2884994152 Bacteria 4492978
196 2891973358 2891968417 Bacteria 5821697
197 2984578743 2984576629 Bacteria 4248407
198 2990258005 2990256926 Bacteria 4252839
199 Ga0466967_0095375
200 LJQas_1000791
201 Ga0007423J48922_100687
202 Ga0068868_100025987
203 Ga0070660_100207342
204 Ga0070688_100108364
205 Ga0070659_100011276
206 Ga0070700_100002994
207 Ga0070700_100027763
208 Ga0070698_100046369
209 Ga0070684_100009885
210 Ga0081455_10000671
211 Ga0081539_10012562
212 Ga0075365_10010835
213 Ga0075365_10026808
214 Ga0075365_10051981
215 Ga0075365_10069768
216 Ga0075365_10145396
217 Ga0075368_10001337
218 Ga0075363_100003644
219 Ga0075363_100037360
220 Ga0075364_10021705
221 Ga0075364_10050146
222 Ga0075367_10001229
223 Ga0075367_10028540
224 Ga0075370_10030133
225 Ga0068865_100005614
226 Ga0111539_10021329
227 Ga0105245_10007753
228 Ga0105243_10012659
229 Ga0105248_10022398
230 Ga0105238_10052932
231 Ga0105249_10020589
232 Ga0157375_10082813
233 Ga0157377_10008895
234 Ga0206353_10709655
235 Ga0207694_10079895
236 Ga0207687_10014654
237 Ga0207709_10017971
238 Ga0207691_10000686
239 Ga0207678_10038799
240 Ga0207708_10000075
241 Ga0207708_10015138
242 Ga0207648_10001457
243 Ga0268264_10000193
244 Ga0316181_1175238
245 Ga0316182_1122309
246 Ga0307405_10012949
247 Ga0307406_10051675
248 Ga0307409_100007792
249 Ga0307409_100018664
250 Ga0307416_100016549
251 Ga0307416_100032476
252 Ga0307415_100000142
253 Ga0395900_0006602
254 Ga0395900_0034840
255 Ga0395898_0042111
256 Ga0395898_0046595
257 Ga0436364_1227070
258 Ga0395901_0103910
259 Ga0395901_0132651
260 Ga0439465_0011517
261 Ga0451833_0207307
262 Ga0451833_0595649
263 Ga0451837_0345621
264 Ga0451839_0594583
265 Ga0439431_0016542
266 Ga0439445_0002943
267 Ga0439446_0001100
268 Ga0439434_0002801
269 Ga0439464_0006178
270 Ga0466961_0036524
271 Ga0466963_0127012
272 Ga0466963_0135223
273 Ga0466970_0003320
274 Ga0466970_0007753
275 Ga0466970_0020545
276 Ga0466970_0063402
277 Ga0466957_0019049
278 Ga0466957_0067784
279 Ga0466960_0001372
280 Ga0466960_0002684
281 Ga0466960_0012604
282 Ga0466960_0051568
283 Ga0466958_0079430
284 Ga0466967_0034192
285 Ga0466967_0144235
286 Ga0466967_0181994
287 Ga0495608_0049791
288 Ga0496101_0102424
289 Ga0496106_0144691
290 Ga0496108_0113392
291 Ga0496109_0088571
292 Ga0496109_0129162
293 Ga0496109_0195301
294 Ga0496114_0148857
295 Ga0501032_0000035
296 Ga0501032_0017647
297 Ga0501032_0052363
298 Ga0501033_0001137
299 Ga0501033_0056176
300 Ga0501034_0000925
301 Ga0501034_0017099
302 Ga0501034_0041416
303 Ga0501036_0000080
304 Ga0501036_0002018
305 Ga0501036_0010750
306 Ga0501037_0000370
307 Ga0501037_0004313
308 Ga0501037_0022388
309 Ga0501038_0000172
310 Ga0501038_0007064
311 Ga0501038_0009084
312 Ga0501038_0026500
313 Ga0501039_0000269
314 Ga0501039_0003905
315 Ga0501040_0018654
316 Ga0501040_0116797
317 Ga0501042_0157648
318 Ga0501043_0000231
319 Ga0501043_0010396
320 Ga0501043_0031578
321 Ga0501046_0000279
322 Ga0501046_0000707
323 Ga0501046_0017695
324 Ga0501046_0153054
325 Ga0501046_0200433
326 Ga0501047_0000458
327 Ga0501047_0015908
328 Ga0501047_0027994
329 Ga0501047_0118906
330 Ga0501048_0000048
331 Ga0501048_0007429
332 Ga0501048_0015028
333 Ga0501067_0003422
334 Ga0501067_0042291
335 Ga0501067_0043525
336 Ga0501068_0017637
337 Ga0501069_0000330
338 Ga0501070_0000504
339 Ga0501070_0015656
340 Ga0501070_0144360
341 Ga0501071_0000648
342 Ga0501071_0192190
343 Ga0501074_0000061
344 Ga0501074_0061573
345 Ga0501074_0099610
346 Ga0501077_0023650
347 Ga0501080_0000160
348 Ga0501080_0019670
349 Ga0501080_0020267
350 Ga0501083_0009694
351 Ga0501083_0064455
352 Ga0501035_0000404
353 Ga0501035_0077645
354 Ga0501044_0000439
355 Ga0501044_0057277
356 Ga0501044_0232275
357 Ga0501045_0017348
358 nmdc:mga03n38_20818_c1
359 nmdc:mga03n38_8768_c1
360 nmdc:mga0yw44_13803_c1
361 nmdc:mga0yw44_163728_c1
362 nmdc:mga0yw44_44389_c1
363 nmdc:mga0yw44_85948_c1
364 nmdc:mga06z11_16871_c1
365 nmdc:mga04h51_19586_c1
366 nmdc:mga08y16_33838_c1
367 Ga0500644_0000104
368 Ga0500556_0001381
369 Ga0500593_000791
370 Ga0500573_0008453
371 Ga0501084_0003359
372 Ga0501082_0043210
373 Ga0466962_0047776
374 2643824710
375 2643892893
376 2643962342
377 2644032073
378 2644093126
379 2644100482
380 2644116890
381 2644322737
382 2644505790
383 2644524372
384 2644535962
385 2644668473
386 2738871174
387 2774395005
388 2809194147
389 2812334871
390 2812348896
391 2855388100
392 2857484845
393 2884997711
394 2891973358
395 2984578743
396 2990258005

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00202

Aminotran_3

Aminotransferase class-III

62

450

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3l44-assembly1.cif.gz_B crystal structure of bacillus anthracis heml-1, glutamate semialdehyde aminotransferase 0.8772 71 464
2cfb-assembly1.cif.gz_A-2 glutamate-1-semialdehyde 2,1-aminomutase from thermosynechococcus elongatus 0.8728 85 460
3l44-assembly1.cif.gz_A crystal structure of bacillus anthracis heml-1, glutamate semialdehyde aminotransferase 0.871 71 464
2cfb-assembly1.cif.gz_A-2 glutamate-1-semialdehyde 2,1-aminomutase from thermosynechococcus elongatus 0.8658 85 460
5i92-assembly2.cif.gz_D crystal structure of glutamate-1-semialdehyde 2,1- aminomutase (gsa) from pseudomonas aeruginosa 0.8526 56 461
ID Description Score Start End Superfamily
3k28A01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9475 357 461 3.90.1150.10
2cfbA01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.939 357 460 3.90.1150.10
af_Q2G283_321_426_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9368 357 459 3.90.1150.10
af_Q2FXR4_335_426_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9295 372 459 3.90.1150.10
3l44A01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9072 352 464 3.90.1150.10
ID Description Score Start End GO Terms
AF-W4UBB1-F1-model_v4 deleted 0.9783 357 467
AF-W4UBB1-F1-model_v4 deleted 0.953 357 467
AF-A0A352KK98-F1-model_v4 Aspartate aminotransferase family protein 0.9447 361 460 GO:0008483
AF-A0A562FQW8-F1-model_v4 deleted 0.9348 212 465
AF-A0A7K2NRA2-F1-model_v4 Aminotransferase class III-fold pyridoxal phosphate-dependent enzyme 0.934 212 465 GO:0008483
GO:0030170

Map