F304361

General Info

Members Datasets Scaffolds Average Seq Length
198 111 394 408

Family's Representative Sequence

Representative Sequence 3300009101|Ga0105247_10011283|Ga0105247_100112832
Length 440
Sequence MINRRWLTTYSLPIALAAGACANGDPSRDLMTTNSSPAEPAAQATSLALTTGTVRESTQTINAAVATEAPAAFDGLTNGFSTQAQMDAAADIFREQEQLADGLGPVYNAQSCGECHQNPVTGAASQVSEFRTGHFDGFNFIDPPGGSLNNDRAISPDIQERILAGQEVRTFRITTNILGDGFVEAIDSATLLAISNGQPASMRGQFIQIPVTEAPGNNRAGRFGWKNQHASLVSFAADAYLNEMGITSPLQPTENTSNGTSVAAFDTVADPEDTGGVNGVDIDAFALFMRSTKAPPRDTVAAATASATTGSSLFDSIGCATCHVRTIQTSPAGTVINGGAFTVPAALGDKIIHPFSDFLLHDVGTGDGIVQNGGQSTRTKLRTPPLWGLRARPRLMHDGASVSRTDAITRHSNEAAGVVSSFNALSTTQRNNIIDFLNSL

Samples

Sample ID Description Type Environment
1 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
71 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
72 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
73 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
76 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
77 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
78 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
79 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
80 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
81 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
82 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
83 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
84 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
85 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
86 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
87 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
88 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
89 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
90 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
91 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
92 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
93 3300049128 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
94 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
95 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
96 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
97 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
98 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
99 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
100 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
103 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
104 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
105 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
106 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
107 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
108 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
109 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
110 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
111 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.48
Metatranscriptomes 1.52
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.55
Rhizosphere 92.93
Stem 0
Stem Tuber 0
Unclassified 11.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105247_10011283 3300009101 Bacteria 5389
2 rootH1_10094959 3300003316 Bacteria 3802
3 rootH1_10058859 3300003323 Bacteria 3560
4 Ga0032354_1021583 3300003693 Bacteria 2777
5 Ga0065707_10146490 3300005295 Unclassified 1708
6 Ga0070658_10022604 3300005327 Bacteria 5046
7 Ga0070676_10023616 3300005328 Bacteria 3457
8 Ga0070690_100112528 3300005330 Bacteria 1818
9 Ga0070666_10006908 3300005335 Bacteria 6993
10 Ga0070666_10084107 3300005335 Bacteria 2177
11 Ga0070689_100019453 3300005340 Bacteria 5022
12 Ga0070691_10007523 3300005341 Bacteria 4993
13 Ga0070691_10018623 3300005341 Bacteria 3202
14 Ga0070687_100013144 3300005343 Unclassified 3679
15 Ga0070692_10026093 3300005345 Unclassified 2885
16 Ga0070669_100000010 3300005353 Bacteria 222186
17 Ga0070669_100000092 3300005353 Bacteria 87728
18 Ga0070659_100190403 3300005366 Bacteria 1686
19 Ga0070667_100068463 3300005367 Bacteria 3021
20 Ga0070709_10109688 3300005434 Bacteria 1853
21 Ga0070705_100000351 3300005440 Bacteria 27225
22 Ga0070705_100067393 3300005440 Unclassified 2150
23 Ga0070705_100078382 3300005440 Bacteria 2021
24 Ga0070705_100137475 3300005440 Bacteria 1603
25 Ga0070700_100049522 3300005441 Bacteria 2609
26 Ga0070694_100001400 3300005444 Bacteria 14101
27 Ga0070694_100022221 3300005444 Bacteria 4062
28 Ga0070694_100034732 3300005444 Bacteria 3327
29 Ga0070694_100155487 3300005444 Bacteria 1674
30 Ga0070708_100114472 3300005445 Bacteria 2482
31 Ga0070685_10022902 3300005466 Bacteria 3412
32 Ga0070685_10033517 3300005466 Bacteria 2886
33 Ga0070707_100007369 3300005468 Bacteria 10219
34 Ga0070707_100160608 3300005468 Unclassified 2190
35 Ga0070698_100003597 3300005471 Bacteria 17030
36 Ga0070698_100089405 3300005471 Bacteria 3063
37 Ga0070699_100001473 3300005518 Bacteria 21536
38 Ga0070699_100023572 3300005518 Bacteria 5301
39 Ga0070697_100001643 3300005536 Bacteria 17029
40 Ga0070695_100000168 3300005545 Bacteria 31403
41 Ga0070695_100003707 3300005545 Bacteria 8902
42 Ga0070695_100006539 3300005545 Bacteria 6886
43 Ga0070695_100008712 3300005545 Bacteria 6028
44 Ga0070695_100110389 3300005545 Bacteria 1865
45 Ga0070695_100137358 3300005545 Unclassified 1691
46 Ga0070696_100000390 3300005546 Bacteria 27028
47 Ga0070696_100044474 3300005546 Bacteria 3075
48 Ga0070665_100000090 3300005548 Bacteria 175078
49 Ga0070704_100021261 3300005549 Unclassified 4204
50 Ga0070704_100025016 3300005549 Bacteria 3926
51 Ga0070704_100026690 3300005549 Bacteria 3821
52 Ga0070702_100069038 3300005615 Bacteria 2081
53 Ga0068864_100058582 3300005618 Bacteria 3330
54 Ga0068861_100172291 3300005719 Bacteria 1795
55 Ga0068858_100089995 3300005842 Bacteria 2856
56 Ga0068860_100002245 3300005843 Bacteria 20334
57 Ga0068860_100074826 3300005843 Bacteria 3221
58 Ga0068860_100149945 3300005843 Bacteria 2245
59 Ga0068862_100000559 3300005844 Bacteria 38731
60 Ga0068862_100007229 3300005844 Bacteria 9218
61 Ga0070717_10002378 3300006028 Bacteria 13266
62 Ga0097621_100025556 3300006237 Bacteria 4621
63 Ga0097621_100085057 3300006237 Bacteria 2637
64 Ga0068871_100006294 3300006358 Bacteria 8383
65 Ga0068871_100132752 3300006358 Bacteria 2112
66 Ga0075428_100043955 3300006844 Unclassified 4911
67 Ga0075428_100162130 3300006844 Bacteria 2427
68 Ga0075430_100073035 3300006846 Bacteria 2877
69 Ga0075431_100012658 3300006847 Bacteria 8519
70 Ga0075433_10098357 3300006852 Bacteria 2590
71 Ga0075433_10238446 3300006852 Bacteria 1614
72 Ga0075434_100000086 3300006871 Bacteria 50533
73 Ga0075434_100144481 3300006871 Bacteria 2399
74 Ga0075434_100332766 3300006871 Bacteria 1539
75 Ga0075436_100001792 3300006914 Bacteria 14716
76 Ga0075436_100011154 3300006914 Bacteria 6162
77 Ga0075436_100011582 3300006914 Bacteria 6049
78 Ga0075435_100000174 3300007076 Bacteria 37839
79 Ga0075435_100044663 3300007076 Bacteria 3549
80 Ga0075435_100184276 3300007076 Unclassified 1765
81 Ga0111539_10074328 3300009094 Bacteria 4004
82 Ga0105245_10014899 3300009098 Bacteria 6773
83 Ga0105245_10103258 3300009098 Unclassified 2641
84 Ga0114129_10010720 3300009147 Bacteria 13068
85 Ga0114129_10011051 3300009147 Bacteria 12860
86 Ga0114129_10013193 3300009147 Bacteria 11773
87 Ga0114129_10018376 3300009147 Bacteria 9959
88 Ga0114129_10020920 3300009147 Bacteria 9295
89 Ga0114129_10025230 3300009147 Bacteria 8421
90 Ga0114129_10028824 3300009147 Bacteria 7866
91 Ga0114129_10051933 3300009147 Bacteria 5754
92 Ga0114129_10114805 3300009147 Unclassified 3713
93 Ga0114129_10199686 3300009147 Unclassified 2710
94 Ga0114129_10284593 3300009147 Bacteria 2208
95 Ga0105242_10025698 3300009176 Bacteria 4663
96 Ga0105242_10084939 3300009176 Bacteria 2653
97 Ga0105248_10199823 3300009177 Bacteria 2252
98 Ga0157376_10056076 3300014969 Bacteria 3290
99 Ga0207710_10024192 3300025900 Bacteria 2614
100 Ga0207680_10012345 3300025903 Bacteria 4348
101 Ga0207680_10043598 3300025903 Unclassified 2632
102 Ga0207645_10030949 3300025907 Bacteria 3447
103 Ga0207705_10031250 3300025909 Bacteria 3799
104 Ga0207705_10036155 3300025909 Unclassified 3534
105 Ga0207684_10003067 3300025910 Bacteria 16555
106 Ga0207684_10166745 3300025910 Bacteria 1898
107 Ga0207646_10008194 3300025922 Bacteria 10502
108 Ga0207646_10023789 3300025922 Bacteria 5622
109 Ga0207646_10094168 3300025922 Unclassified 2682
110 Ga0207681_10000011 3300025923 Bacteria 366878
111 Ga0207681_10000078 3300025923 Bacteria 87730
112 Ga0207687_10046696 3300025927 Bacteria 2999
113 Ga0207689_10058534 3300025942 Bacteria 3170
114 Ga0207703_10100156 3300026035 Bacteria 2454
115 Ga0207708_10086030 3300026075 Bacteria 2419
116 Ga0207648_10055324 3300026089 Bacteria 3464
117 Ga0207675_100377650 3300026118 Unclassified 1393
118 Ga0207428_10054001 3300027907 Bacteria 3201
119 Ga0268266_10000375 3300028379 Bacteria 68332
120 Ga0268266_10017778 3300028379 Bacteria 6059
121 Ga0268265_10000119 3300028380 Bacteria 99097
122 Ga0268265_10000711 3300028380 Bacteria 32769
123 Ga0268264_10003782 3300028381 Bacteria 12986
124 Ga0268264_10056855 3300028381 Bacteria 3271
125 Ga0268264_10081724 3300028381 Bacteria 2762
126 Ga0307513_10051589 3300031456 Bacteria 4436
127 Ga0307508_10011264 3300031616 Bacteria 8182
128 Ga0307508_10040069 3300031616 Bacteria 4208
129 Ga0307410_10016241 3300031852 Bacteria 4436
130 Ga0307407_10107994 3300031903 Bacteria 1741
131 Ga0307409_100048381 3300031995 Bacteria 3235
132 Ga0307414_10017678 3300032004 Bacteria 4370
133 Ga0373929_0000001 3300035085 Bacteria 956023
134 Ga0373929_0000051 3300035085 Bacteria 23837
135 Ga0373936_0000005 3300035113 Bacteria 325848
136 Ga0373936_0000060 3300035113 Bacteria 52820
137 Ga0373939_0026451 3300035114 Bacteria 1636
138 Ga0373961_0000121 3300035241 Bacteria 39845
139 Ga0373961_0000644 3300035241 Bacteria 12549
140 Ga0373935_0008760 3300035692 Bacteria 6063
141 Ga0451576_0173773 3300045051 Bacteria 2249
142 Ga0495584_0095729 3300046491 Bacteria 1499
143 Ga0495621_0003778 3300046539 Bacteria 4198
144 Ga0495659_0024407 3300046664 Unclassified 2062
145 Ga0495615_0007484 3300048090 Bacteria 2074
146 Ga0496100_0001062 3300048903 Bacteria 13246
147 Ga0496101_0001533 3300048904 Bacteria 13847
148 Ga0496104_0063134 3300048907 Bacteria 3512
149 Ga0496107_0016518 3300048910 Bacteria 5185
150 Ga0496108_0197274 3300048911 Bacteria 1746
151 Ga0496114_0000005 3300048917 Bacteria 564262
152 Ga0496114_0000026 3300048917 Bacteria 205625
153 Ga0496114_0000426 3300048917 Bacteria 31103
154 Ga0501306_006272 3300049127 Unclassified 1390
155 Ga0501308_003785 3300049128 Bacteria 1424
156 Ga0501067_0056077 3300049583 Bacteria 2183
157 Ga0501068_0002306 3300049584 Bacteria 10164
158 Ga0501075_0000146 3300049591 Bacteria 35382
159 Ga0501075_0006356 3300049591 Bacteria 8128
160 Ga0501077_0000417 3300049593 Bacteria 25774
161 Ga0501077_0000997 3300049593 Bacteria 17072
162 Ga0501080_0073593 3300049742 Bacteria 3179
163 Ga0501081_0103973 3300049743 Unclassified 2010
164 Ga0501081_0132204 3300049743 Bacteria 1784
165 Ga0501083_0003256 3300049744 Bacteria 11332
166 nmdc:mga05p37_101825_c1 3300050507 Unclassified 3537
167 nmdc:mga05p37_11279_c1 3300050507 Bacteria 10628
168 nmdc:mga05p37_114924_c1 3300050507 Unclassified 3308
169 nmdc:mga05p37_12558_c1 3300050507 Bacteria 10113
170 nmdc:mga05p37_134481_c1 3300050507 Bacteria 3033
171 nmdc:mga05p37_159404_c1 3300050507 Bacteria 2756
172 nmdc:mga05p37_21673_c1 3300050507 Bacteria 7784
173 nmdc:mga05p37_22399_c1 3300050507 Bacteria 5768
174 nmdc:mga05p37_237090_c1 3300050507 Bacteria 2195
175 nmdc:mga05p37_343358_c1 3300050507 Bacteria 1760
176 nmdc:mga05p37_399580_c1 3300050507 Bacteria 1605
177 nmdc:mga05p37_7080_c1 3300050507 Bacteria 13224
178 nmdc:mga09592_57946_c1 3300050508 Bacteria 3275
179 nmdc:mga09592_88189_c1 3300050508 Bacteria 2649
180 nmdc:mga0qj67_40382_c1 3300050509 Bacteria 2886
181 nmdc:mga06r32_54927_c1 3300050510 Unclassified 3820
182 nmdc:mga08y16_44557_c1 3300050511 Bacteria 4648
183 nmdc:mga0n895_117885_c1 3300050512 Bacteria 2674
184 nmdc:mga0n895_254098_c1 3300050512 Bacteria 1784
185 nmdc:mga0n895_51053_c1 3300050512 Bacteria 4057
186 nmdc:mga0n895_8_c1 3300050512 Bacteria 121439
187 nmdc:mga0rr50_23_c1 3300050513 Bacteria 116800
188 nmdc:mga08x19_1304_c1 3300050514 Bacteria 15487
189 nmdc:mga08x19_41073_c1 3300050514 Bacteria 2946
190 nmdc:mga08x19_6695_c1 3300050514 Bacteria 6838
191 nmdc:mga0a205_104677_c1 3300050515 Bacteria 2729
192 nmdc:mga0a205_172211_c1 3300050515 Bacteria 2061
193 nmdc:mga0a205_352934_c1 3300050515 Bacteria 1338
194 Ga0501082_0000395 3300060353 Bacteria 38677
195 Ga0501082_0029687 3300060353 Unclassified 4711
196 Ga0501082_0066263 3300060353 Bacteria 3110
197 Ga0530510_0036872 3300061734 Bacteria 3523
198 Ga0105247_10011283
199 rootH1_10094959
200 rootH1_10058859
201 Ga0032354_1021583
202 Ga0065707_10146490
203 Ga0070658_10022604
204 Ga0070676_10023616
205 Ga0070690_100112528
206 Ga0070666_10006908
207 Ga0070666_10084107
208 Ga0070689_100019453
209 Ga0070691_10007523
210 Ga0070691_10018623
211 Ga0070687_100013144
212 Ga0070692_10026093
213 Ga0070669_100000010
214 Ga0070669_100000092
215 Ga0070659_100190403
216 Ga0070667_100068463
217 Ga0070709_10109688
218 Ga0070705_100000351
219 Ga0070705_100067393
220 Ga0070705_100078382
221 Ga0070705_100137475
222 Ga0070700_100049522
223 Ga0070694_100001400
224 Ga0070694_100022221
225 Ga0070694_100034732
226 Ga0070694_100155487
227 Ga0070708_100114472
228 Ga0070685_10022902
229 Ga0070685_10033517
230 Ga0070707_100007369
231 Ga0070707_100160608
232 Ga0070698_100003597
233 Ga0070698_100089405
234 Ga0070699_100001473
235 Ga0070699_100023572
236 Ga0070697_100001643
237 Ga0070695_100000168
238 Ga0070695_100003707
239 Ga0070695_100006539
240 Ga0070695_100008712
241 Ga0070695_100110389
242 Ga0070695_100137358
243 Ga0070696_100000390
244 Ga0070696_100044474
245 Ga0070665_100000090
246 Ga0070704_100021261
247 Ga0070704_100025016
248 Ga0070704_100026690
249 Ga0070702_100069038
250 Ga0068864_100058582
251 Ga0068861_100172291
252 Ga0068858_100089995
253 Ga0068860_100002245
254 Ga0068860_100074826
255 Ga0068860_100149945
256 Ga0068862_100000559
257 Ga0068862_100007229
258 Ga0070717_10002378
259 Ga0097621_100025556
260 Ga0097621_100085057
261 Ga0068871_100006294
262 Ga0068871_100132752
263 Ga0075428_100043955
264 Ga0075428_100162130
265 Ga0075430_100073035
266 Ga0075431_100012658
267 Ga0075433_10098357
268 Ga0075433_10238446
269 Ga0075434_100000086
270 Ga0075434_100144481
271 Ga0075434_100332766
272 Ga0075436_100001792
273 Ga0075436_100011154
274 Ga0075436_100011582
275 Ga0075435_100000174
276 Ga0075435_100044663
277 Ga0075435_100184276
278 Ga0111539_10074328
279 Ga0105245_10014899
280 Ga0105245_10103258
281 Ga0114129_10010720
282 Ga0114129_10011051
283 Ga0114129_10013193
284 Ga0114129_10018376
285 Ga0114129_10020920
286 Ga0114129_10025230
287 Ga0114129_10028824
288 Ga0114129_10051933
289 Ga0114129_10114805
290 Ga0114129_10199686
291 Ga0114129_10284593
292 Ga0105242_10025698
293 Ga0105242_10084939
294 Ga0105248_10199823
295 Ga0157376_10056076
296 Ga0207710_10024192
297 Ga0207680_10012345
298 Ga0207680_10043598
299 Ga0207645_10030949
300 Ga0207705_10031250
301 Ga0207705_10036155
302 Ga0207684_10003067
303 Ga0207684_10166745
304 Ga0207646_10008194
305 Ga0207646_10023789
306 Ga0207646_10094168
307 Ga0207681_10000011
308 Ga0207681_10000078
309 Ga0207687_10046696
310 Ga0207689_10058534
311 Ga0207703_10100156
312 Ga0207708_10086030
313 Ga0207648_10055324
314 Ga0207675_100377650
315 Ga0207428_10054001
316 Ga0268266_10000375
317 Ga0268266_10017778
318 Ga0268265_10000119
319 Ga0268265_10000711
320 Ga0268264_10003782
321 Ga0268264_10056855
322 Ga0268264_10081724
323 Ga0307513_10051589
324 Ga0307508_10011264
325 Ga0307508_10040069
326 Ga0307410_10016241
327 Ga0307407_10107994
328 Ga0307409_100048381
329 Ga0307414_10017678
330 Ga0373929_0000001
331 Ga0373929_0000051
332 Ga0373936_0000005
333 Ga0373936_0000060
334 Ga0373939_0026451
335 Ga0373961_0000121
336 Ga0373961_0000644
337 Ga0373935_0008760
338 Ga0451576_0173773
339 Ga0495584_0095729
340 Ga0495621_0003778
341 Ga0495659_0024407
342 Ga0495615_0007484
343 Ga0496100_0001062
344 Ga0496101_0001533
345 Ga0496104_0063134
346 Ga0496107_0016518
347 Ga0496108_0197274
348 Ga0496114_0000005
349 Ga0496114_0000026
350 Ga0496114_0000426
351 Ga0501306_006272
352 Ga0501308_003785
353 Ga0501067_0056077
354 Ga0501068_0002306
355 Ga0501075_0000146
356 Ga0501075_0006356
357 Ga0501077_0000417
358 Ga0501077_0000997
359 Ga0501080_0073593
360 Ga0501081_0103973
361 Ga0501081_0132204
362 Ga0501083_0003256
363 nmdc:mga05p37_101825_c1
364 nmdc:mga05p37_11279_c1
365 nmdc:mga05p37_114924_c1
366 nmdc:mga05p37_12558_c1
367 nmdc:mga05p37_134481_c1
368 nmdc:mga05p37_159404_c1
369 nmdc:mga05p37_21673_c1
370 nmdc:mga05p37_22399_c1
371 nmdc:mga05p37_237090_c1
372 nmdc:mga05p37_343358_c1
373 nmdc:mga05p37_399580_c1
374 nmdc:mga05p37_7080_c1
375 nmdc:mga09592_57946_c1
376 nmdc:mga09592_88189_c1
377 nmdc:mga0qj67_40382_c1
378 nmdc:mga06r32_54927_c1
379 nmdc:mga08y16_44557_c1
380 nmdc:mga0n895_117885_c1
381 nmdc:mga0n895_254098_c1
382 nmdc:mga0n895_51053_c1
383 nmdc:mga0n895_8_c1
384 nmdc:mga0rr50_23_c1
385 nmdc:mga08x19_1304_c1
386 nmdc:mga08x19_41073_c1
387 nmdc:mga08x19_6695_c1
388 nmdc:mga0a205_104677_c1
389 nmdc:mga0a205_172211_c1
390 nmdc:mga0a205_352934_c1
391 Ga0501082_0000395
392 Ga0501082_0029687
393 Ga0501082_0066263
394 Ga0530510_0036872

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06537

DHOR

Di-haem oxidoreductase, putative peroxidase

141

440

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hq6-assembly1.cif.gz_B cytochrome c peroxidase from g. sulfurreducens, wild type 0.6866 246 405
3hq9-assembly1.cif.gz_B ccpa from g. sulfurreducens, s134p variant 0.6712 238 405
2c1u-assembly2.cif.gz_D crystal structure of the di-haem cytochrome c peroxidase from paracoccus pantotrophus - oxidised form 0.6346 238 404
3o5c-assembly2.cif.gz_D cytochrome c peroxidase bccp of shewanella oneidensis 0.5961 186 404
2c1u-assembly1.cif.gz_A crystal structure of the di-haem cytochrome c peroxidase from paracoccus pantotrophus - oxidised form 0.5721 238 404
ID Description Score Start End Superfamily
6fu3B01 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.6325 267 404 1.10.760.10
4fa4B02 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.6323 269 404 1.10.760.10
4aaoA01 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.6123 237 405 1.10.760.10
4aaoA01 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.5489 237 405 1.10.760.10
6fu3B01 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.4917 267 404 1.10.760.10
ID Description Score Start End GO Terms
AF-A0A2V8SMW2-F1-model_v4 Cytochrome c domain-containing protein 0.9851 123 405 GO:0004130
GO:0009055
GO:0020037
GO:0046872
AF-A0A534BT50-F1-model_v4 Cytochrome c domain-containing protein 0.9639 258 405 GO:0004130
GO:0009055
GO:0020037
GO:0046872
AF-A0A2V8MHU7-F1-model_v4 Uncharacterized protein 0.9629 347 405 GO:0009055
GO:0020037
AF-A0A7G8BDL1-F1-model_v4 C-type cytochrome 0.9622 169 405 GO:0004130
GO:0009055
GO:0020037
GO:0046872
AF-A0A2V7FW21-F1-model_v4 Cytochrome c domain-containing protein 0.9592 266 405 GO:0004130
GO:0009055
GO:0020037
GO:0046872

Map