F303918

General Info

Members Datasets Scaffolds Average Seq Length
198 123 191 423

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100175121|Ga0070683_1001751211
Length 444
Sequence MRVALVNPPWSFEGSIYFGCREPHLPLEYGYARSLLEADGHDATIFDAHNQRWDHAALAERVAAFQPQIAVVTTAPTYLFWRCPPPELRAPSQVIGDLALACGSKNRPALVAVGPHASTTPGTTLRKLGADAAVLGECEEILQVLARTPQADWGRVPSLARLNAAGEVELTGGGRSSDMTALPALKWRADELAGHDHHHHRFDSAPDAPGAEMETSRGCPYRCTFCAKETHRDRYRKRPLAKVLEELDALIAAGARYVYFIDEIFLPDMPLLAAVGERGIAFGVQTRIDLWSFEQLDALGAAGCVSIEAGVESITVEGRAQLDKKCRLTTDDLTARLTHAKRSVAFVQATLMESRHDDPGAVTAWRDELRAAGVWANDPVPLFPYPGSPDYTRLWGAPDDRAWERAHEHYLRQFSAFSDVQEQRPVRLSILEAQASPSPRLDEP

Samples

Sample ID Description Type Environment
1 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
2 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
3 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
4 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
5 2881364244 Bradyrhizobium sp. RP6 Isolate Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
38 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
41 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
63 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
64 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
65 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
66 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
67 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
68 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
69 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
70 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
71 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
72 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
78 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
79 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
80 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
81 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
82 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
83 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
84 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
85 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
86 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
87 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
88 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
89 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
90 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
91 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
92 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
93 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
94 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
103 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
104 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
105 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
106 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
107 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
108 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
109 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
112 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
113 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
114 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
115 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
116 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
117 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
118 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
119 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
120 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
121 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
122 8016511872 Bradyrhizobium sp. S3.14.4 Isolate Nodule
123 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.95
Metatranscriptomes 1.52
Isolates 3.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.51
Nodule 1.01
Rhizoplane 3.03
Rhizosphere 77.27
Stem 0
Stem Tuber 0
Unclassified 18.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10143339 3300003322 Bacteria 5644
2 rootH1_10164080 3300003323 Bacteria 2668
3 rootH1_10206783 3300003323 Bacteria 2430
4 Ga0065712_10125073 3300005290 Bacteria 1618
5 Ga0070683_100011625 3300005329 Bacteria 7619
6 Ga0070683_100175121 3300005329 Bacteria 2037
7 Ga0070680_100006469 3300005336 Bacteria 8908
8 Ga0068868_100066542 3300005338 Bacteria 2865
9 Ga0070689_100016821 3300005340 Bacteria 5360
10 Ga0070659_100031280 3300005366 Bacteria 4122
11 Ga0070659_100111890 3300005366 Unclassified 2205
12 Ga0070714_100008914 3300005435 Bacteria 7849
13 Ga0070681_10010025 3300005458 Bacteria 9339
14 Ga0070679_100112655 3300005530 Bacteria 2706
15 Ga0070679_100152276 3300005530 Bacteria 2289
16 Ga0070704_100006531 3300005549 Bacteria 6877
17 Ga0068855_100001134 3300005563 Bacteria 33034
18 Ga0068855_100260158 3300005563 Bacteria 1933
19 Ga0068856_100069804 3300005614 Bacteria 3474
20 Ga0068856_100316456 3300005614 Unclassified 1578
21 Ga0068852_100005890 3300005616 Bacteria 8814
22 Ga0081538_10003178 3300005981 Bacteria 15616
23 Ga0081538_10003980 3300005981 Bacteria 13763
24 Ga0070717_10020816 3300006028 Bacteria 5163
25 Ga0075430_100161357 3300006846 Bacteria 1866
26 Ga0075431_100009874 3300006847 Bacteria 9584
27 Ga0075433_10081320 3300006852 Unclassified 2856
28 Ga0099795_10016768 3300007788 Bacteria 2324
29 Ga0105240_10007887 3300009093 Bacteria 15353
30 Ga0105240_10029318 3300009093 Bacteria 7173
31 Ga0105240_10144416 3300009093 Bacteria 2841
32 Ga0111539_10036133 3300009094 Bacteria 5976
33 Ga0105247_10008199 3300009101 Bacteria 6376
34 Ga0114129_10197585 3300009147 Bacteria 2727
35 Ga0114129_10234839 3300009147 Bacteria 2468
36 Ga0105237_10033323 3300009545 Bacteria 5218
37 Ga0105238_10046491 3300009551 Bacteria 4380
38 Ga0105238_10142265 3300009551 Bacteria 2375
39 Ga0157370_10001264 3300013104 Bacteria 31564
40 Ga0157370_10268780 3300013104 Bacteria 1576
41 Ga0157369_10006127 3300013105 Bacteria 13957
42 Ga0157372_10011187 3300013307 Bacteria 9543
43 Ga0157372_10075673 3300013307 Bacteria 3799
44 Ga0206350_10095159 3300020080 Bacteria 5065
45 Ga0213872_10068143 3300021361 Bacteria 1606
46 Ga0213876_10004309 3300021384 Bacteria 7973
47 Ga0213876_10012824 3300021384 Bacteria 4456
48 Ga0213875_10000005 3300021388 Bacteria 595146
49 Ga0213875_10000013 3300021388 Bacteria 305595
50 Ga0213875_10003691 3300021388 Bacteria 8633
51 Ga0213875_10005248 3300021388 Bacteria 6978
52 Ga0213875_10035735 3300021388 Bacteria 2344
53 Ga0213875_10037490 3300021388 Unclassified 2284
54 Ga0213875_10049993 3300021388 Bacteria 1959
55 Ga0213875_10056493 3300021388 Unclassified 1839
56 Ga0213875_10061782 3300021388 Bacteria 1753
57 Ga0213871_10015929 3300021441 Bacteria 1805
58 Ga0224712_10009304 3300022467 Bacteria 2954
59 Ga0224712_10043090 3300022467 Unclassified 1714
60 Ga0207697_10002753 3300025315 Bacteria 8971
61 Ga0207710_10000706 3300025900 Bacteria 18722
62 Ga0207688_10013854 3300025901 Bacteria 4384
63 Ga0207707_10032244 3300025912 Bacteria 4586
64 Ga0207695_10046673 3300025913 Unclassified 4590
65 Ga0207671_10044915 3300025914 Bacteria 3266
66 Ga0207660_10004851 3300025917 Bacteria 8755
67 Ga0207657_10012353 3300025919 Bacteria 8434
68 Ga0207657_10083585 3300025919 Bacteria 2678
69 Ga0207652_10161925 3300025921 Bacteria 2006
70 Ga0207694_10054869 3300025924 Unclassified 3093
71 Ga0207659_10150177 3300025926 Bacteria 1819
72 Ga0207690_10099858 3300025932 Bacteria 2070
73 Ga0207670_10010318 3300025936 Bacteria 5373
74 Ga0207661_10026617 3300025944 Bacteria 4410
75 Ga0207667_10028448 3300025949 Bacteria 6072
76 Ga0207677_10042396 3300026023 Bacteria 3017
77 Ga0207678_10071298 3300026067 Unclassified 2979
78 Ga0207702_10018891 3300026078 Bacteria 5702
79 Ga0207676_10052514 3300026095 Bacteria 3187
80 Ga0207698_10014231 3300026142 Bacteria 5281
81 Ga0307408_100024168 3300031548 Bacteria 4146
82 Ga0307408_100097263 3300031548 Bacteria 2236
83 Ga0307413_10044359 3300031824 Bacteria 2628
84 Ga0307413_10114198 3300031824 Bacteria 1815
85 Ga0307410_10012012 3300031852 Bacteria 4984
86 Ga0307410_10049471 3300031852 Bacteria 2822
87 Ga0307407_10029560 3300031903 Bacteria 2946
88 Ga0307412_10056094 3300031911 Bacteria 2624
89 Ga0307409_100019725 3300031995 Bacteria 4574
90 Ga0307416_100012459 3300032002 Bacteria 5730
91 Ga0307416_100038401 3300032002 Bacteria 3694
92 Ga0307416_100159332 3300032002 Bacteria 2083
93 Ga0307411_10027615 3300032005 Bacteria 3437
94 Ga0307411_10033130 3300032005 Bacteria 3201
95 Ga0307411_10083385 3300032005 Bacteria 2208
96 Ga0307415_100032273 3300032126 Bacteria 3385
97 Ga0307415_100061906 3300032126 Bacteria 2593
98 Ga0373950_0000021 3300034818 Bacteria 209053
99 Ga0395899_0013638 3300037312 Bacteria 6212
100 Ga0395900_0027812 3300037418 Bacteria 5793
101 Ga0395900_0063502 3300037418 Bacteria 3796
102 Ga0395898_0243652 3300037466 Bacteria 1714
103 Ga0395898_0302552 3300037466 Bacteria 1525
104 Ga0436364_0080170 3300037853 Bacteria 70161
105 Ga0436364_0262582 3300037853 Bacteria 77527
106 Ga0436364_0597618 3300037853 Bacteria 2147
107 Ga0436364_0637508 3300037853 Bacteria 21608
108 Ga0436364_0794765 3300037853 Bacteria 162685
109 Ga0436364_1032338 3300037853 Bacteria 9750
110 Ga0436364_1081420 3300037853 Bacteria 4123
111 Ga0436364_1347891 3300037853 Bacteria 1881
112 Ga0436364_1362929 3300037853 Bacteria 4155
113 Ga0436364_1450999 3300037853 Unclassified 2662
114 Ga0395901_0135439 3300038443 Bacteria 2589
115 Ga0395901_0215080 3300038443 Bacteria 2010
116 Ga0436365_0009296 3300039437 Bacteria 11983
117 Ga0436365_0354942 3300039437 Bacteria 1781
118 Ga0436365_0593788 3300039437 Bacteria 6839
119 Ga0436365_0626084 3300039437 Bacteria 1935
120 Ga0436365_0910953 3300039437 Bacteria 3798
121 Ga0436365_1443393 3300039437 Unclassified 1593
122 Ga0436365_1486967 3300039437 Bacteria 1897
123 Ga0436365_1556013 3300039437 Bacteria 2644
124 Ga0436360_0627712 3300039438 Bacteria 2529
125 Ga0436360_1297352 3300039438 Bacteria 4948
126 Ga0436361_0092319 3300039447 Bacteria 3641
127 Ga0436361_0196022 3300039447 Bacteria 1898
128 Ga0436361_0778437 3300039447 Bacteria 1469
129 Ga0436361_0930152 3300039447 Bacteria 2279
130 Ga0436361_1057190 3300039447 Bacteria 5231
131 Ga0436362_0131415 3300039453 Bacteria 1684
132 Ga0436362_0228400 3300039453 Unclassified 2944
133 Ga0436362_0945236 3300039453 Bacteria 2597
134 Ga0436362_1209968 3300039453 Bacteria 4637
135 Ga0451807_1185521 3300041486 Bacteria 3700
136 Ga0451577_0037104 3300042876 Bacteria 4388
137 Ga0466963_0153266 3300044694 Bacteria 1601
138 Ga0453684_0000049 3300044712 Bacteria 559289
139 Ga0466957_0030445 3300044842 Bacteria 3223
140 Ga0466960_0025682 3300044901 Bacteria 2668
141 Ga0451576_0017888 3300045051 Bacteria 7784
142 Ga0451576_0167576 3300045051 Bacteria 2292
143 Ga0466967_0220431 3300045976 Bacteria 1802
144 Ga0496102_0037754 3300048905 Bacteria 4358
145 Ga0496106_0050916 3300048909 Bacteria 3122
146 Ga0496108_0110618 3300048911 Bacteria 2349
147 Ga0496109_0274310 3300048912 Bacteria 1589
148 Ga0496110_0037147 3300048913 Bacteria 4233
149 Ga0501291_001563 3300049514 Bacteria 2669
150 Ga0501034_0000040 3300049571 Bacteria 234210
151 Ga0501034_0036521 3300049571 Bacteria 4977
152 Ga0501038_0042347 3300049574 Bacteria 3966
153 Ga0501041_0040302 3300049577 Bacteria 2835
154 Ga0501043_0000909 3300049579 Bacteria 26225
155 Ga0501046_0000116 3300049580 Bacteria 84309
156 Ga0501046_0037458 3300049580 Bacteria 3897
157 Ga0501047_0000001 3300049581 Bacteria 658799
158 Ga0501047_0061572 3300049581 Bacteria 3621
159 Ga0501048_0017356 3300049582 Bacteria 5304
160 Ga0501067_0007568 3300049583 Bacteria 6039
161 Ga0501067_0011360 3300049583 Bacteria 4931
162 Ga0501067_0028756 3300049583 Bacteria 3080
163 Ga0501067_0108721 3300049583 Bacteria 1542
164 Ga0501070_0004319 3300049586 Bacteria 12212
165 Ga0501071_0121581 3300049587 Bacteria 1935
166 Ga0501072_0000114 3300049588 Bacteria 59417
167 Ga0501073_0001272 3300049589 Bacteria 18508
168 Ga0501073_0003866 3300049589 Bacteria 11247
169 Ga0501074_0003145 3300049590 Bacteria 11646
170 Ga0501076_0007322 3300049592 Bacteria 8029
171 Ga0501079_0000423 3300049741 Bacteria 27567
172 Ga0501079_0138197 3300049741 Bacteria 1898
173 Ga0501080_0072305 3300049742 Bacteria 3209
174 Ga0501081_0005354 3300049743 Bacteria 8281
175 Ga0501083_0004697 3300049744 Bacteria 9647
176 Ga0501083_0009893 3300049744 Bacteria 6732
177 nmdc:mga05p37_171780_c1 3300050507 Bacteria 2643
178 nmdc:mga0qj67_139393_c1 3300050509 Bacteria 1966
179 nmdc:mga0qj67_58111_c1 3300050509 Bacteria 3066
180 nmdc:mga0a205_60665_c1 3300050515 Bacteria 3652
181 Ga0500641_0000365 3300053096 Bacteria 16785
182 Ga0501084_0000153 3300054114 Bacteria 52662
183 Ga0501084_0071050 3300054114 Bacteria 2914
184 Ga0590071_000585 3300059421 Bacteria 10495
185 Ga0590071_000953 3300059421 Bacteria 8000
186 Ga0590075_002804 3300059424 Bacteria 4160
187 Ga0590075_003743 3300059424 Bacteria 3608
188 Ga0590077_000022 3300059426 Bacteria 35588
189 Ga0590077_000232 3300059426 Bacteria 15988
190 Ga0590077_001173 3300059426 Bacteria 6373
191 Ga0501082_0006685 3300060353 Bacteria 9975

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037466 Ga0395898_0243652 Ga0395898_0243652_599_1690 327
2 3300037466 Ga0395898_0302552 Ga0395898_0302552_24_1091 347
3 3300044694 Ga0466963_0153266 Ga0466963_0153266_458_1591 368
4 3300050507 nmdc:mga05p37_171780_c1 nmdc:mga05p37_171780_c1_1435_2625 385
5 3300038443 Ga0395901_0135439 Ga0395901_0135439_1029_2324 395
6 3300037312 Ga0395899_0013638 Ga0395899_0013638_4176_5447 399
7 3300037418 Ga0395900_0027812 Ga0395900_0027812_1843_3114 399
8 3300038443 Ga0395901_0215080 Ga0395901_0215080_310_1581 399
9 3300005336 Ga0070680_100006469 Ga0070680_1000064696 405
10 3300005530 Ga0070679_100152276 Ga0070679_1001522761 405
11 3300005563 Ga0068855_100001134 Ga0068855_10000113426 405
12 3300005616 Ga0068852_100005890 Ga0068852_1000058902 405
13 3300013104 Ga0157370_10001264 Ga0157370_1000126425 405
14 3300013105 Ga0157369_10006127 Ga0157369_100061272 405
15 3300013307 Ga0157372_10011187 Ga0157372_100111875 405
16 3300022467 Ga0224712_10009304 Ga0224712_100093042 405
17 3300025917 Ga0207660_10004851 Ga0207660_100048516 405
18 3300025919 Ga0207657_10083585 Ga0207657_100835852 405
19 3300025921 Ga0207652_10161925 Ga0207652_101619253 405
20 3300025949 Ga0207667_10028448 Ga0207667_100284484 405
21 3300026142 Ga0207698_10014231 Ga0207698_100142315 405
22 3300031824 Ga0307413_10114198 Ga0307413_101141982 406
23 3300050509 nmdc:mga0qj67_58111_c1 nmdc:mga0qj67_58111_c1_696_1940 406
24 3300037853 Ga0436364_1347891 Ga0436364_1347891_412_1695 408
25 3300049571 Ga0501034_0000040 Ga0501034_0000040_128216_129502 408
26 3300049574 Ga0501038_0042347 Ga0501038_0042347_612_1898 408
27 3300049579 Ga0501043_0000909 Ga0501043_0000909_18238_19524 408
28 3300049580 Ga0501046_0000116 Ga0501046_0000116_34134_35420 408
29 3300049581 Ga0501047_0000001 Ga0501047_0000001_497833_499119 408
30 3300049586 Ga0501070_0004319 Ga0501070_0004319_1914_3200 408
31 3300049588 Ga0501072_0000114 Ga0501072_0000114_51808_53094 408
32 3300049589 Ga0501073_0001272 Ga0501073_0001272_15063_16349 408
33 3300049590 Ga0501074_0003145 Ga0501074_0003145_5102_6388 408
34 3300049741 Ga0501079_0000423 Ga0501079_0000423_8028_9314 408
35 3300049744 Ga0501083_0004697 Ga0501083_0004697_1832_3118 408
36 3300054114 Ga0501084_0000153 Ga0501084_0000153_33047_34333 408
37 3300060353 Ga0501082_0006685 Ga0501082_0006685_2160_3446 408
38 3300031548 Ga0307408_100024168 Ga0307408_1000241684 409
39 3300031824 Ga0307413_10044359 Ga0307413_100443593 409
40 3300032002 Ga0307416_100159332 Ga0307416_1001593322 409
41 3300039438 Ga0436360_1297352 Ga0436360_1297352_562_1842 409
42 3300039447 Ga0436361_0930152 Ga0436361_0930152_216_1499 409
43 3300006846 Ga0075430_100161357 Ga0075430_1001613572 410
44 3300006847 Ga0075431_100009874 Ga0075431_1000098742 410
45 3300021388 Ga0213875_10061782 Ga0213875_100617822 410
46 3300050509 nmdc:mga0qj67_139393_c1 nmdc:mga0qj67_139393_c1_341_1633 410
47 3300045051 Ga0451576_0167576 Ga0451576_0167576_837_2147 411
48 3300031852 Ga0307410_10049471 Ga0307410_100494712 412
49 3300032002 Ga0307416_100038401 Ga0307416_1000384012 412
50 3300032126 Ga0307415_100032273 Ga0307415_1000322733 412
51 3300005435 Ga0070714_100008914 Ga0070714_1000089142 413
52 3300049583 Ga0501067_0011360 Ga0501067_0011360_761_2032 414
53 3300031903 Ga0307407_10029560 Ga0307407_100295602 415
54 3300032005 Ga0307411_10027615 Ga0307411_100276152 415
55 3300039437 Ga0436365_0593788 Ga0436365_0593788_5373_6659 415
56 3300049514 Ga0501291_001563 Ga0501291_001563_1127_2461 415
57 3300053096 Ga0500641_0000365 Ga0500641_0000365_15203_16558 415
58 3300037418 Ga0395900_0063502 Ga0395900_0063502_1166_2452 416
59 iso_pu_bacteria 2513237092 2513622652 416
60 iso_pu_bacteria 2522572158 2523102436 416
61 iso_pu_bacteria 2881364244 2881368206 416
62 iso_pu_bacteria 8016511872 8016512592 416
63 3300003323 rootH1_10164080 rootH1_101640802 417
64 3300005329 Ga0070683_100011625 Ga0070683_1000116252 417
65 3300009093 Ga0105240_10007887 Ga0105240_100078879 417
66 3300009147 Ga0114129_10197585 Ga0114129_101975852 417
67 3300009551 Ga0105238_10046491 Ga0105238_100464914 417
68 3300021388 Ga0213875_10000013 Ga0213875_10000013159 417
69 3300025924 Ga0207694_10054869 Ga0207694_100548693 417
70 3300037853 Ga0436364_0794765 Ga0436364_0794765_136100_137383 417
71 3300044842 Ga0466957_0030445 Ga0466957_0030445_1380_2663 417
72 iso_pu_bacteria 2511231221 2512035799 417
73 iso_pu_bacteria 8054002106 8054003615 417
74 3300005549 Ga0070704_100006531 Ga0070704_1000065313 418
75 3300006852 Ga0075433_10081320 Ga0075433_100813202 418
76 3300021384 Ga0213876_10004309 Ga0213876_100043093 418
77 3300021441 Ga0213871_10015929 Ga0213871_100159292 418
78 3300026095 Ga0207676_10052514 Ga0207676_100525142 418
79 3300039437 Ga0436365_0910953 Ga0436365_0910953_644_1927 418
80 3300039437 Ga0436365_1443393 Ga0436365_1443393_245_1528 418
81 3300039453 Ga0436362_1209968 Ga0436362_1209968_2613_3896 418
82 3300042876 Ga0451577_0037104 Ga0451577_0037104_2875_4164 418
83 3300044712 Ga0453684_0000049 Ga0453684_0000049_492950_494239 418
84 3300048905 Ga0496102_0037754 Ga0496102_0037754_97_1398 418
85 3300048909 Ga0496106_0050916 Ga0496106_0050916_1801_3102 418
86 3300049581 Ga0501047_0061572 Ga0501047_0061572_1994_3307 418
87 3300049583 Ga0501067_0028756 Ga0501067_0028756_1615_2940 418
88 3300050515 nmdc:mga0a205_60665_c1 nmdc:mga0a205_60665_c1_113_1414 418
89 iso_pu_bacteria 2848858292 2848863649 418
90 3300005614 Ga0068856_100069804 Ga0068856_1000698042 419
91 3300005614 Ga0068856_100316456 Ga0068856_1003164561 419
92 3300009093 Ga0105240_10029318 Ga0105240_100293182 419
93 3300009093 Ga0105240_10144416 Ga0105240_101444162 419
94 3300009147 Ga0114129_10234839 Ga0114129_102348392 419
95 3300009551 Ga0105238_10142265 Ga0105238_101422652 419
96 3300013104 Ga0157370_10268780 Ga0157370_102687802 419
97 3300020080 Ga0206350_10095159 Ga0206350_100951592 419
98 3300021384 Ga0213876_10012824 Ga0213876_100128242 419
99 3300021388 Ga0213875_10000005 Ga0213875_1000000523 419
100 3300021388 Ga0213875_10003691 Ga0213875_100036913 419
101 3300021388 Ga0213875_10005248 Ga0213875_100052484 419
102 3300021388 Ga0213875_10035735 Ga0213875_100357352 419
103 3300021388 Ga0213875_10037490 Ga0213875_100374902 419
104 3300021388 Ga0213875_10049993 Ga0213875_100499932 419
105 3300021388 Ga0213875_10056493 Ga0213875_100564932 419
106 3300022467 Ga0224712_10043090 Ga0224712_100430902 419
107 3300025913 Ga0207695_10046673 Ga0207695_100466732 419
108 3300026067 Ga0207678_10071298 Ga0207678_100712982 419
109 3300026078 Ga0207702_10018891 Ga0207702_100188914 419
110 3300034818 Ga0373950_0000021 Ga0373950_0000021_91961_93247 419
111 3300037853 Ga0436364_0080170 Ga0436364_0080170_19782_21074 419
112 3300037853 Ga0436364_0262582 Ga0436364_0262582_73169_74458 419
113 3300037853 Ga0436364_0597618 Ga0436364_0597618_803_2089 419
114 3300037853 Ga0436364_0637508 Ga0436364_0637508_13327_14622 419
115 3300037853 Ga0436364_1032338 Ga0436364_1032338_5732_7018 419
116 3300037853 Ga0436364_1081420 Ga0436364_1081420_880_2166 419
117 3300037853 Ga0436364_1362929 Ga0436364_1362929_1963_3249 419
118 3300037853 Ga0436364_1450999 Ga0436364_1450999_1097_2383 419
119 3300039437 Ga0436365_0009296 Ga0436365_0009296_370_1656 419
120 3300039437 Ga0436365_0354942 Ga0436365_0354942_441_1727 419
121 3300039437 Ga0436365_1486967 Ga0436365_1486967_538_1824 419
122 3300039437 Ga0436365_1556013 Ga0436365_1556013_767_2053 419
123 3300039447 Ga0436361_0092319 Ga0436361_0092319_818_2104 419
124 3300039447 Ga0436361_0778437 Ga0436361_0778437_40_1326 419
125 3300039447 Ga0436361_1057190 Ga0436361_1057190_2382_3668 419
126 3300039453 Ga0436362_0131415 Ga0436362_0131415_249_1535 419
127 3300039453 Ga0436362_0228400 Ga0436362_0228400_1167_2453 419
128 3300039453 Ga0436362_0945236 Ga0436362_0945236_1267_2553 419
129 3300041486 Ga0451807_1185521 Ga0451807_1185521_1835_3148 419
130 3300049577 Ga0501041_0040302 Ga0501041_0040302_1091_2374 419
131 3300049580 Ga0501046_0037458 Ga0501046_0037458_1993_3276 419
132 3300049583 Ga0501067_0108721 Ga0501067_0108721_53_1345 419
133 3300049741 Ga0501079_0138197 Ga0501079_0138197_225_1508 419
134 3300049743 Ga0501081_0005354 Ga0501081_0005354_3554_4837 419
135 3300054114 Ga0501084_0071050 Ga0501084_0071050_954_2237 419
136 3300009094 Ga0111539_10036133 Ga0111539_100361333 420
137 3300013307 Ga0157372_10075673 Ga0157372_100756733 420
138 3300031852 Ga0307410_10012012 Ga0307410_100120124 420
139 3300031911 Ga0307412_10056094 Ga0307412_100560942 420
140 3300031995 Ga0307409_100019725 Ga0307409_1000197254 420
141 3300032002 Ga0307416_100012459 Ga0307416_1000124593 420
142 3300032005 Ga0307411_10033130 Ga0307411_100331302 420
143 3300032126 Ga0307415_100061906 Ga0307415_1000619062 420
144 3300039437 Ga0436365_0626084 Ga0436365_0626084_258_1547 420
145 3300039438 Ga0436360_0627712 Ga0436360_0627712_494_1786 420
146 3300045051 Ga0451576_0017888 Ga0451576_0017888_5181_6473 420
147 3300045976 Ga0466967_0220431 Ga0466967_0220431_19_1308 420
148 3300005981 Ga0081538_10003980 Ga0081538_100039809 421
149 3300007788 Ga0099795_10016768 Ga0099795_100167681 421
150 3300032005 Ga0307411_10083385 Ga0307411_100833852 421
151 3300049571 Ga0501034_0036521 Ga0501034_0036521_2858_4162 421
152 3300049582 Ga0501048_0017356 Ga0501048_0017356_3927_5240 421
153 3300005290 Ga0065712_10125073 Ga0065712_101250732 422
154 3300005338 Ga0068868_100066542 Ga0068868_1000665422 422
155 3300005366 Ga0070659_100031280 Ga0070659_1000312804 422
156 3300005366 Ga0070659_100111890 Ga0070659_1001118902 422
157 3300005458 Ga0070681_10010025 Ga0070681_100100252 422
158 3300005530 Ga0070679_100112655 Ga0070679_1001126552 422
159 3300005563 Ga0068855_100260158 Ga0068855_1002601582 422
160 3300005981 Ga0081538_10003178 Ga0081538_100031787 422
161 3300009545 Ga0105237_10033323 Ga0105237_100333232 422
162 3300021361 Ga0213872_10068143 Ga0213872_100681432 422
163 3300025315 Ga0207697_10002753 Ga0207697_100027532 422
164 3300025901 Ga0207688_10013854 Ga0207688_100138543 422
165 3300025912 Ga0207707_10032244 Ga0207707_100322443 422
166 3300025914 Ga0207671_10044915 Ga0207671_100449153 422
167 3300025919 Ga0207657_10012353 Ga0207657_100123532 422
168 3300025926 Ga0207659_10150177 Ga0207659_101501772 422
169 3300025932 Ga0207690_10099858 Ga0207690_100998582 422
170 3300025944 Ga0207661_10026617 Ga0207661_100266172 422
171 3300026023 Ga0207677_10042396 Ga0207677_100423962 422
172 3300039447 Ga0436361_0196022 Ga0436361_0196022_303_1607 422
173 3300048911 Ga0496108_0110618 Ga0496108_0110618_1035_2330 422
174 3300048912 Ga0496109_0274310 Ga0496109_0274310_255_1556 422
175 3300048913 Ga0496110_0037147 Ga0496110_0037147_227_1528 422
176 3300049583 Ga0501067_0007568 Ga0501067_0007568_3264_4559 422
177 3300049587 Ga0501071_0121581 Ga0501071_0121581_82_1395 422
178 3300049589 Ga0501073_0003866 Ga0501073_0003866_849_2144 422
179 3300049592 Ga0501076_0007322 Ga0501076_0007322_71_1384 422
180 3300049742 Ga0501080_0072305 Ga0501080_0072305_590_1900 422
181 3300049744 Ga0501083_0009893 Ga0501083_0009893_3001_4311 422
182 3300059421 Ga0590071_000585 Ga0590071_000585_6627_7928 422
183 3300059421 Ga0590071_000953 Ga0590071_000953_4788_6092 422
184 3300059424 Ga0590075_002804 Ga0590075_002804_1953_3257 422
185 3300059424 Ga0590075_003743 Ga0590075_003743_1249_2550 422
186 3300059426 Ga0590077_000022 Ga0590077_000022_5446_6747 422
187 3300059426 Ga0590077_000232 Ga0590077_000232_11274_12578 422
188 3300059426 Ga0590077_001173 Ga0590077_001173_821_2122 422
189 3300003322 rootL2_10143339 rootL2_101433395 423
190 3300003323 rootH1_10206783 rootH1_102067832 423
191 3300005329 Ga0070683_100175121 Ga0070683_1001751211 423
192 3300005340 Ga0070689_100016821 Ga0070689_1000168212 423
193 3300006028 Ga0070717_10020816 Ga0070717_100208163 423
194 3300009101 Ga0105247_10008199 Ga0105247_100081992 423
195 3300025900 Ga0207710_10000706 Ga0207710_1000070613 423
196 3300025936 Ga0207670_10010318 Ga0207670_100103184 423
197 3300031548 Ga0307408_100097263 Ga0307408_1000972632 423
198 3300044901 Ga0466960_0025682 Ga0466960_0025682_1198_2553 423

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

213

352

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
6wtf-assembly1.cif.gz_A structure of radical s-adenosylmethionine methyltransferase, tsrm, from kitasatospora setae with tryptophan substrate and sam analog (aza-sam) bound 0.7895 2 376
5ul3-assembly1.cif.gz_A structure of cobalamin-dependent s-adenosylmethionine radical enzyme oxsb with aqua-cobalamin bound 0.7841 2 352
6wtf-assembly2.cif.gz_B structure of radical s-adenosylmethionine methyltransferase, tsrm, from kitasatospora setae with tryptophan substrate and sam analog (aza-sam) bound 0.778 2 376
6wte-assembly2.cif.gz_B structure of radical s-adenosylmethionine methyltransferase, tsrm, from kitasatospora setae with cobalamin and [4fe-4s] cluster bound 0.7705 2 376
6wte-assembly1.cif.gz_A structure of radical s-adenosylmethionine methyltransferase, tsrm, from kitasatospora setae with cobalamin and [4fe-4s] cluster bound 0.7538 2 376
ID Description Score Start End Superfamily
4jc0B02 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.8276 197 291 3.30.750.210
af_P96395_164_380_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8228 196 379 3.80.30.20
af_Q57567_110_367_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7699 198 358 3.20.20.70
af_Q59015_26_136_3.40.50.280 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Cobalamin-binding domain 0.76 31 155 3.40.50.280
4m7tA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7536 196 296 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A531KFH0-F1-model_v4 B12-binding domain-containing radical SAM protein 0.9877 227 382 GO:0005829
GO:0051536
AF-A0A537RMN9-F1-model_v4 B12-binding domain-containing radical SAM protein 0.9786 205 418 GO:0003824
GO:0005829
GO:0016020
GO:0051536
AF-A0A434EHI4-F1-model_v4 B12-binding domain-containing radical SAM protein 0.9764 1 142 GO:0031419
GO:0046872
AF-A0A531KFH0-F1-model_v4 B12-binding domain-containing radical SAM protein 0.9753 227 382 GO:0005829
GO:0051536
AF-A0A6N1DVX5-F1-model_v4 TIGR04295 family B12-binding domain-containing radical SAM protein 0.9711 1 418 GO:0003824
GO:0005829
GO:0051536

Feature Viewer

pLDDT pTM Quality
90.55 0.91 High
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Predicted Structure (AlphaFold2)

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