F303857

General Info

Members Datasets Scaffolds Average Seq Length
198 156 173 384

Family's Representative Sequence

Representative Sequence 3300005288|Ga0065714_10070088|Ga0065714_100700884
Length 420
Sequence MSNDAVIVDVVRTPSGRGKPGGALSGVHPADLLAGVLNDLVNRNNLDPALVDDVIGGCLTQVGEQSTNITRTALLSAGFPESVPGTTIDRQCGSSQQAATFAAQGVIAGSYDIVIACGVESMSRIPLGSAGGPTPPGGSDSAGRTEGWGSPTAWSAIAGQDPHGRLMHARYPQGLVGQGVSAELISAKWGLTRTELDEYAARSHRLAAEAAARGDFDASLLPVTLADGRQVVGDETIRRRSTVETLADLPLAFRTDELAARFPEVDWQITAGNSSPLTDGASAALIMSADRAAALGLTPRARFHSFAVTGSDPLLMLTGVIPATRRILARTGLGIDDLDAYEVNEAFACVPLVWQRELHADLAKLNAQGGAIALGHALGSSGTRLLGTLLGTLEAGGGRYGLQTMCEGGGMANATIIERL

Samples

Sample ID Description Type Environment
1 2643221572 Leifsonia sp. Root60 Isolate Unclassified
2 2643221575 Microbacterium sp. Root61 Isolate Unclassified
3 2643221649 Leifsonia sp. Root4 Isolate Unclassified
4 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
5 2738541295 Bacillus sp. OK085 Isolate Unclassified
6 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
7 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
8 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
9 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
10 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
11 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
12 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
13 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
14 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
15 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
16 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
17 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
18 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
19 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
20 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
21 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
22 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
23 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
24 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
25 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
26 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
27 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
30 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
31 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
46 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
84 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
85 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
86 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
87 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
90 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
91 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
92 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
93 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
94 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
95 3300031678 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE6 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
96 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
97 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
98 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
99 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
100 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
101 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
104 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
105 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
108 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
109 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
112 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
113 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
114 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
119 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
120 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
121 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
122 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
123 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
124 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
125 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
126 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
127 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
128 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
129 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
140 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
141 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
142 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
146 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
147 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
148 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
149 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
150 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
151 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
152 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
153 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
154 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
155 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
156 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.36
Metatranscriptomes 1.01
Isolates 12.63

Biome Distribution

Category Percentage (%)
Aerial Root 1.01
Bulb 0
Endosphere 6.06
Nodule 0
Rhizoplane 4.04
Rhizosphere 69.19
Stem 0
Stem Tuber 0
Unclassified 19.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055540_1004989 3300003792 Bacteria 5773
2 Ga0065714_10070088 3300005288 Bacteria 3975
3 Ga0070658_10000034 3300005327 Bacteria 146880
4 Ga0070658_10065463 3300005327 Bacteria 2966
5 Ga0070658_10087418 3300005327 Bacteria 2565
6 Ga0070661_100252859 3300005344 Bacteria 1360
7 Ga0070688_100087331 3300005365 Bacteria 2031
8 Ga0070659_100000482 3300005366 Bacteria 29316
9 Ga0070667_100106860 3300005367 Bacteria 2423
10 Ga0070708_100012281 3300005445 Bacteria 6983
11 Ga0070685_10021331 3300005466 Bacteria 3520
12 Ga0070706_100044461 3300005467 Bacteria 4103
13 Ga0070707_100038256 3300005468 Bacteria 4581
14 Ga0070704_100130904 3300005549 Bacteria 1944
15 Ga0068855_100000569 3300005563 Bacteria 45301
16 Ga0068855_100164172 3300005563 Bacteria 2519
17 Ga0068857_100000239 3300005577 Bacteria 36717
18 Ga0068856_100133491 3300005614 Bacteria 2488
19 Ga0068852_100005308 3300005616 Bacteria 9199
20 Ga0068852_100006627 3300005616 Bacteria 8390
21 Ga0068864_100081753 3300005618 Bacteria 2833
22 Ga0068851_10000027 3300005834 Bacteria 118586
23 Ga0068863_100409343 3300005841 Bacteria 1327
24 Ga0068858_100000023 3300005842 Bacteria 167824
25 Ga0081455_10003787 3300005937 Bacteria 17259
26 Ga0081455_10076351 3300005937 Bacteria 2760
27 Ga0070717_10113944 3300006028 Bacteria 2309
28 Ga0075368_10001421 3300006042 Bacteria 7661
29 Ga0075367_10023321 3300006178 Bacteria 3481
30 Ga0075428_100000664 3300006844 Bacteria 35332
31 Ga0099795_10000579 3300007788 Bacteria 6959
32 Ga0105240_10006683 3300009093 Bacteria 16911
33 Ga0105240_10110833 3300009093 Bacteria 3321
34 Ga0105245_10008008 3300009098 Bacteria 9242
35 Ga0105245_10162403 3300009098 Bacteria 2121
36 Ga0105247_10000043 3300009101 Bacteria 157839
37 Ga0105247_10159850 3300009101 Bacteria 1491
38 Ga0105241_10005071 3300009174 Bacteria 9712
39 Ga0105248_10000492 3300009177 Bacteria 44904
40 Ga0105248_10005388 3300009177 Bacteria 14063
41 Ga0105248_10024079 3300009177 Bacteria 6766
42 Ga0105237_10000442 3300009545 Bacteria 59060
43 Ga0105237_10004130 3300009545 Bacteria 16923
44 Ga0105239_10256352 3300010375 Bacteria 1965
45 Ga0105239_10291883 3300010375 Bacteria 1836
46 Ga0157371_10008241 3300013102 Bacteria 8332
47 Ga0157369_10000686 3300013105 Bacteria 43803
48 Ga0157369_10035393 3300013105 Bacteria 5475
49 Ga0171462_1002 3300013250 Bacteria 1052134
50 Ga0163162_10386971 3300013306 Bacteria 1532
51 Ga0163163_10038475 3300014325 Bacteria 4663
52 Ga0157379_10015201 3300014968 Bacteria 6752
53 Ga0157379_10059250 3300014968 Bacteria 3423
54 Ga0207656_10000001 3300025321 Bacteria 1323684
55 Ga0207692_10109071 3300025898 Bacteria 1533
56 Ga0207710_10000064 3300025900 Bacteria 162498
57 Ga0207705_10000001 3300025909 Bacteria 2061880
58 Ga0207705_10020612 3300025909 Bacteria 4707
59 Ga0207684_10046093 3300025910 Bacteria 3698
60 Ga0207654_10000001 3300025911 Bacteria 1816198
61 Ga0207695_10003163 3300025913 Bacteria 23477
62 Ga0207695_10065465 3300025913 Bacteria 3737
63 Ga0207671_10000001 3300025914 Bacteria 1318881
64 Ga0207649_10114113 3300025920 Bacteria 1810
65 Ga0207646_10057915 3300025922 Bacteria 3461
66 Ga0207694_10000222 3300025924 Bacteria 55592
67 Ga0207700_10267684 3300025928 Bacteria 1466
68 Ga0207664_10029469 3300025929 Bacteria 4181
69 Ga0207690_10000300 3300025932 Bacteria 34612
70 Ga0207711_10001560 3300025941 Bacteria 21176
71 Ga0207711_10025354 3300025941 Bacteria 4974
72 Ga0207711_10033501 3300025941 Bacteria 4347
73 Ga0207667_10003485 3300025949 Bacteria 19431
74 Ga0207667_10005569 3300025949 Bacteria 15370
75 Ga0207667_10069623 3300025949 Bacteria 3662
76 Ga0207703_10000224 3300026035 Bacteria 65306
77 Ga0207639_10051146 3300026041 Bacteria 3142
78 Ga0207702_10054494 3300026078 Bacteria 3389
79 Ga0207674_10001276 3300026116 Bacteria 32897
80 Ga0207698_10000473 3300026142 Bacteria 23344
81 Ga0207698_10033007 3300026142 Bacteria 3757
82 Ga0207698_10033978 3300026142 Bacteria 3712
83 Ga0265337_1000261 3300028556 Bacteria 28562
84 Ga0265326_10004672 3300028558 Bacteria 4365
85 Ga0265319_1009560 3300028563 Bacteria 4118
86 Ga0265334_10000487 3300028573 Bacteria 20544
87 Ga0265336_10016816 3300028666 Bacteria 2388
88 Ga0265338_10000144 3300028800 Bacteria 131848
89 Ga0265338_10001487 3300028800 Bacteria 37930
90 Ga0265338_10003718 3300028800 Bacteria 21220
91 Ga0265324_10014302 3300029957 Bacteria 2940
92 Ga0265332_10001164 3300031238 Bacteria 15225
93 Ga0265320_10029006 3300031240 Bacteria 2867
94 Ga0265340_10010499 3300031247 Bacteria 4951
95 Ga0265316_10118617 3300031344 Bacteria 1999
96 Ga0265313_10011461 3300031595 Bacteria 5510
97 Ga0310114_105238 3300031678 Bacteria 1326
98 Ga0265314_10015542 3300031711 Bacteria 6039
99 Ga0265342_10004910 3300031712 Bacteria 10345
100 Ga0307406_10000057 3300031901 Bacteria 61661
101 Ga0307415_100279426 3300032126 Bacteria 1372
102 Ga0372808_005392 3300036459 Bacteria 1685
103 Ga0373925_0000101 3300037068 Bacteria 92997
104 Ga0373925_0051208 3300037068 Bacteria 3082
105 Ga0395900_0177852 3300037418 Bacteria 2164
106 Ga0436365_1889369 3300039437 Bacteria 169293
107 Ga0466965_0055856 3300044683 Bacteria 1965
108 Ga0466961_0036492 3300044693 Bacteria 3155
109 Ga0466959_0023433 3300045049 Bacteria 4568
110 Ga0495650_0004472 3300046471 Bacteria 9560
111 Ga0495662_0084397 3300046476 Bacteria 1546
112 Ga0495646_0047575 3300046680 Bacteria 2610
113 Ga0495674_0062894 3300047319 Bacteria 3230
114 Ga0495676_0135422 3300047321 Bacteria 1772
115 Ga0495687_002553 3300047443 Bacteria 14399
116 Ga0495686_0004779 3300047472 Bacteria 10948
117 Ga0496100_0226275 3300048903 Bacteria 1375
118 Ga0496108_0061974 3300048911 Bacteria 3149
119 Ga0496108_0325356 3300048911 Bacteria 1340
120 Ga0496111_0276314 3300048914 Bacteria 1246
121 Ga0496114_0014217 3300048917 Bacteria 6385
122 Ga0496114_0123487 3300048917 Bacteria 2229
123 Ga0496114_0210644 3300048917 Bacteria 1704
124 Ga0496115_0016137 3300048918 Bacteria 5680
125 Ga0496116_0001135 3300048919 Bacteria 31691
126 Ga0496116_0007328 3300048919 Bacteria 9812
127 Ga0496117_0038503 3300048920 Bacteria 3543
128 Ga0496117_0096724 3300048920 Bacteria 1883
129 Ga0496118_0012769 3300048921 Bacteria 8021
130 Ga0496119_0000215 3300048922 Bacteria 82231
131 Ga0496119_0000905 3300048922 Bacteria 38593
132 Ga0496119_0001370 3300048922 Bacteria 29726
133 Ga0496119_0003297 3300048922 Bacteria 16861
134 Ga0496119_0022390 3300048922 Bacteria 4526
135 Ga0496119_0099355 3300048922 Bacteria 1637
136 Ga0496120_0000264 3300048923 Bacteria 87474
137 Ga0496120_0002435 3300048923 Bacteria 18835
138 Ga0496120_0002807 3300048923 Bacteria 16857
139 Ga0496120_0012558 3300048923 Bacteria 5759
140 Ga0496120_0021233 3300048923 Bacteria 4106
141 Ga0496121_0010265 3300048924 Bacteria 10597
142 Ga0496122_0000208 3300048925 Bacteria 131175
143 Ga0496123_0000003 3300048926 Bacteria 866556
144 Ga0496124_0020949 3300048927 Bacteria 6030
145 Ga0496125_0007059 3300048928 Bacteria 11999
146 Ga0501031_0000156 3300049568 Bacteria 38816
147 Ga0501032_0001239 3300049569 Bacteria 20482
148 Ga0501033_0002504 3300049570 Bacteria 15567
149 Ga0501034_0062388 3300049571 Bacteria 3742
150 Ga0501036_0001565 3300049572 Bacteria 17677
151 Ga0501037_0114984 3300049573 Bacteria 1937
152 Ga0501038_0005500 3300049574 Bacteria 11760
153 Ga0501043_0088418 3300049579 Bacteria 2435
154 Ga0501046_0000631 3300049580 Bacteria 34597
155 Ga0501048_0006530 3300049582 Bacteria 8865
156 Ga0501069_0011639 3300049585 Bacteria 4664
157 Ga0501070_0007551 3300049586 Bacteria 9241
158 Ga0501070_0020584 3300049586 Bacteria 5533
159 Ga0501071_0000215 3300049587 Bacteria 26394
160 Ga0501072_0230866 3300049588 Bacteria 1474
161 Ga0501080_0025172 3300049742 Bacteria 5523
162 Ga0501035_0026677 3300049822 Bacteria 5284
163 Ga0501045_0144343 3300049824 Bacteria 1770
164 nmdc:mga00v17_2769_c1 3300050491 Bacteria 8996
165 nmdc:mga00v17_32662_c1 3300050491 Bacteria 3078
166 nmdc:mga00v17_59738_c1 3300050491 Bacteria 2340
167 nmdc:mga0yw44_7011_c1 3300050492 Bacteria 5511
168 nmdc:mga06z11_713_c1 3300050494 Bacteria 12105
169 nmdc:mga04h51_310_c1 3300050495 Bacteria 12301
170 Ga0495601_0234120 3300053077 Bacteria 1199
171 Ga0500651_0000349 3300053093 Bacteria 25900
172 Ga0500573_0009558 3300053140 Bacteria 5385
173 Ga0500616_0000131 3300053153 Bacteria 131881

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048914 Ga0496111_0276314 Ga0496111_0276314_29_1090 341
2 3300049569 Ga0501032_0001239 Ga0501032_0001239_12334_13500 356
3 3300049570 Ga0501033_0002504 Ga0501033_0002504_717_1883 356
4 3300049574 Ga0501038_0005500 Ga0501038_0005500_2241_3407 356
5 3300049580 Ga0501046_0000631 Ga0501046_0000631_18543_19709 356
6 3300049582 Ga0501048_0006530 Ga0501048_0006530_589_1755 356
7 3300049588 Ga0501072_0230866 Ga0501072_0230866_52_1218 356
8 3300049742 Ga0501080_0025172 Ga0501080_0025172_2296_3462 356
9 3300049822 Ga0501035_0026677 Ga0501035_0026677_2186_3352 356
10 3300049824 Ga0501045_0144343 Ga0501045_0144343_418_1584 356
11 3300005365 Ga0070688_100087331 Ga0070688_1000873312 357
12 3300005577 Ga0068857_100000239 Ga0068857_10000023916 357
13 3300026116 Ga0207674_10001276 Ga0207674_1000127616 357
14 3300049568 Ga0501031_0000156 Ga0501031_0000156_16905_18071 364
15 3300049572 Ga0501036_0001565 Ga0501036_0001565_13470_14636 364
16 3300049585 Ga0501069_0011639 Ga0501069_0011639_2841_4007 364
17 3300005327 Ga0070658_10087418 Ga0070658_100874183 365
18 3300005616 Ga0068852_100006627 Ga0068852_1000066273 365
19 3300005834 Ga0068851_10000027 Ga0068851_1000002791 365
20 3300006042 Ga0075368_10001421 Ga0075368_100014212 365
21 3300006178 Ga0075367_10023321 Ga0075367_100233212 365
22 3300009545 Ga0105237_10000442 Ga0105237_1000044221 365
23 3300025321 Ga0207656_10000001 Ga0207656_10000001918 365
24 3300025914 Ga0207671_10000001 Ga0207671_10000001917 365
25 3300026142 Ga0207698_10033007 Ga0207698_100330074 365
26 3300050494 nmdc:mga06z11_713_c1 nmdc:mga06z11_713_c1_9231_10373 365
27 3300050495 nmdc:mga04h51_310_c1 nmdc:mga04h51_310_c1_2958_4100 365
28 3300005549 Ga0070704_100130904 Ga0070704_1001309042 366
29 3300013105 Ga0157369_10035393 Ga0157369_100353932 367
30 3300044683 Ga0466965_0055856 Ga0466965_0055856_457_1635 368
31 3300009098 Ga0105245_10162403 Ga0105245_101624032 369
32 3300009177 Ga0105248_10024079 Ga0105248_100240795 369
33 3300025941 Ga0207711_10033501 Ga0207711_100335012 369
34 iso_pu_bacteria 2738541295 2738813216 369
35 iso_pu_bacteria 3001892409 3001892997 369
36 3300006844 Ga0075428_100000664 Ga0075428_1000006645 372
37 3300048920 Ga0496117_0096724 Ga0496117_0096724_202_1383 372
38 3300050491 nmdc:mga00v17_2769_c1 nmdc:mga00v17_2769_c1_228_1400 372
39 iso_pu_bacteria 2808606439 2809197517 372
40 iso_pu_bacteria 8054472261 8054478393 372
41 iso_pu_bacteria 2816332139 2816507315 373
42 3300005614 Ga0068856_100133491 Ga0068856_1001334912 374
43 3300009101 Ga0105247_10159850 Ga0105247_101598502 374
44 3300025924 Ga0207694_10000222 Ga0207694_1000022250 374
45 3300026078 Ga0207702_10054494 Ga0207702_100544943 374
46 3300005937 Ga0081455_10003787 Ga0081455_1000378715 375
47 3300005937 Ga0081455_10076351 Ga0081455_100763512 375
48 3300010375 Ga0105239_10256352 Ga0105239_102563522 375
49 3300044693 Ga0466961_0036492 Ga0466961_0036492_1711_2859 375
50 3300045049 Ga0466959_0023433 Ga0466959_0023433_215_1363 375
51 iso_pu_bacteria 2870782633 2870785648 375
52 3300007788 Ga0099795_10000579 Ga0099795_100005792 376
53 3300009093 Ga0105240_10006683 Ga0105240_100066839 377
54 3300009174 Ga0105241_10005071 Ga0105241_100050713 377
55 3300025911 Ga0207654_10000001 Ga0207654_10000001214 377
56 3300025913 Ga0207695_10003163 Ga0207695_1000316320 377
57 3300025928 Ga0207700_10267684 Ga0207700_102676841 377
58 3300032126 Ga0307415_100279426 Ga0307415_1002794261 377
59 3300037418 Ga0395900_0177852 Ga0395900_0177852_510_1658 377
60 3300048911 Ga0496108_0061974 Ga0496108_0061974_537_1706 377
61 3300053077 Ga0495601_0234120 Ga0495601_0234120_13_1161 377
62 3300053153 Ga0500616_0000131 Ga0500616_0000131_120121_121269 377
63 3300025900 Ga0207710_10000064 Ga0207710_10000064154 378
64 3300025941 Ga0207711_10025354 Ga0207711_100253545 378
65 3300005327 Ga0070658_10065463 Ga0070658_100654632 379
66 3300005344 Ga0070661_100252859 Ga0070661_1002528591 379
67 3300005366 Ga0070659_100000482 Ga0070659_1000004828 379
68 3300005367 Ga0070667_100106860 Ga0070667_1001068601 379
69 3300005466 Ga0070685_10021331 Ga0070685_100213313 379
70 3300005563 Ga0068855_100164172 Ga0068855_1001641722 379
71 3300005616 Ga0068852_100005308 Ga0068852_1000053088 379
72 3300005618 Ga0068864_100081753 Ga0068864_1000817531 379
73 3300005841 Ga0068863_100409343 Ga0068863_1004093431 379
74 3300005842 Ga0068858_100000023 Ga0068858_10000002361 379
75 3300009093 Ga0105240_10110833 Ga0105240_101108331 379
76 3300009098 Ga0105245_10008008 Ga0105245_100080087 379
77 3300009177 Ga0105248_10000492 Ga0105248_1000049226 379
78 3300009545 Ga0105237_10004130 Ga0105237_1000413013 379
79 3300013306 Ga0163162_10386971 Ga0163162_103869712 379
80 3300014325 Ga0163163_10038475 Ga0163163_100384756 379
81 3300014968 Ga0157379_10015201 Ga0157379_100152012 379
82 3300025909 Ga0207705_10020612 Ga0207705_100206125 379
83 3300025913 Ga0207695_10065465 Ga0207695_100654654 379
84 3300025920 Ga0207649_10114113 Ga0207649_101141132 379
85 3300025932 Ga0207690_10000300 Ga0207690_1000030028 379
86 3300025941 Ga0207711_10001560 Ga0207711_100015605 379
87 3300025949 Ga0207667_10003485 Ga0207667_1000348515 379
88 3300025949 Ga0207667_10069623 Ga0207667_100696233 379
89 3300026035 Ga0207703_10000224 Ga0207703_1000022437 379
90 3300026041 Ga0207639_10051146 Ga0207639_100511462 379
91 3300026142 Ga0207698_10000473 Ga0207698_1000047319 379
92 3300026142 Ga0207698_10033978 Ga0207698_100339783 379
93 3300028800 Ga0265338_10001487 Ga0265338_1000148725 379
94 3300028800 Ga0265338_10003718 Ga0265338_1000371816 379
95 3300036459 Ga0372808_005392 Ga0372808_005392_374_1552 379
96 3300053093 Ga0500651_0000349 Ga0500651_0000349_9424_10605 379
97 3300009101 Ga0105247_10000043 Ga0105247_10000043147 380
98 3300009177 Ga0105248_10005388 Ga0105248_1000538811 380
99 3300014968 Ga0157379_10059250 Ga0157379_100592503 380
100 3300048922 Ga0496119_0000215 Ga0496119_0000215_75697_76854 380
101 3300048923 Ga0496120_0000264 Ga0496120_0000264_7654_8811 380
102 3300049573 Ga0501037_0114984 Ga0501037_0114984_277_1461 380
103 3300037068 Ga0373925_0000101 Ga0373925_0000101_38461_39639 381
104 3300048919 Ga0496116_0007328 Ga0496116_0007328_3392_4570 381
105 3300048920 Ga0496117_0038503 Ga0496117_0038503_984_2162 381
106 3300048921 Ga0496118_0012769 Ga0496118_0012769_4050_5228 381
107 3300048922 Ga0496119_0003297 Ga0496119_0003297_7261_8439 381
108 3300048923 Ga0496120_0002807 Ga0496120_0002807_2749_3927 381
109 3300048925 Ga0496122_0000208 Ga0496122_0000208_13895_15073 381
110 3300048926 Ga0496123_0000003 Ga0496123_0000003_11446_12624 381
111 3300048927 Ga0496124_0020949 Ga0496124_0020949_2490_3668 381
112 3300048928 Ga0496125_0007059 Ga0496125_0007059_3543_4721 381
113 3300037068 Ga0373925_0051208 Ga0373925_0051208_1563_2783 382
114 3300046476 Ga0495662_0084397 Ga0495662_0084397_117_1337 382
115 3300046680 Ga0495646_0047575 Ga0495646_0047575_1343_2563 382
116 3300047319 Ga0495674_0062894 Ga0495674_0062894_1360_2580 382
117 3300047321 Ga0495676_0135422 Ga0495676_0135422_140_1360 382
118 3300048918 Ga0496115_0016137 Ga0496115_0016137_759_1943 382
119 3300048922 Ga0496119_0099355 Ga0496119_0099355_462_1625 382
120 3300048923 Ga0496120_0021233 Ga0496120_0021233_712_1893 383
121 iso_pu_bacteria 2808606447 2809228678 383
122 iso_pu_bacteria 2833709550 2833712615 383
123 iso_pu_bacteria 2852632344 2852633950 383
124 iso_pu_bacteria 2868088558 2868090305 383
125 iso_pu_bacteria 2883821847 2883822345 383
126 iso_pu_bacteria 8045830549 8045831188 383
127 3300005327 Ga0070658_10000034 Ga0070658_1000003436 384
128 3300013102 Ga0157371_10008241 Ga0157371_100082415 384
129 3300025909 Ga0207705_10000001 Ga0207705_10000001289 384
130 3300053140 Ga0500573_0009558 Ga0500573_0009558_881_2035 384
131 iso_pu_bacteria 2643221575 2643886951 384
132 iso_pu_bacteria 2811994872 2812324849 384
133 iso_pu_bacteria 2821268502 2821271397 384
134 iso_pu_bacteria 2870628048 2870629169 384
135 iso_pu_bacteria 2984576629 2984577840 384
136 iso_pu_bacteria 2990256926 2990260189 384
137 3300031678 Ga0310114_105238 Ga0310114_1052381 385
138 iso_pu_bacteria 2643221572 2643874521 385
139 iso_pu_bacteria 2643221669 2644381577 385
140 iso_pu_bacteria 2895660088 2895663464 385
141 iso_pu_bacteria 8046352972 8046355672 385
142 3300049571 Ga0501034_0062388 Ga0501034_0062388_1566_2741 386
143 3300049579 Ga0501043_0088418 Ga0501043_0088418_583_1758 386
144 3300049586 Ga0501070_0020584 Ga0501070_0020584_4212_5387 386
145 3300049587 Ga0501071_0000215 Ga0501071_0000215_10702_11877 386
146 iso_pu_bacteria 2643221649 2644278667 386
147 iso_pu_bacteria 2808606368 2808883983 386
148 3300013250 Ga0171462_1002 Ga0171462_1002469 387
149 3300025898 Ga0207692_10109071 Ga0207692_101090712 387
150 3300025929 Ga0207664_10029469 Ga0207664_100294692 387
151 3300028556 Ga0265337_1000261 Ga0265337_100026122 387
152 3300028558 Ga0265326_10004672 Ga0265326_100046722 387
153 3300028563 Ga0265319_1009560 Ga0265319_10095603 387
154 3300028573 Ga0265334_10000487 Ga0265334_100004877 387
155 3300028666 Ga0265336_10016816 Ga0265336_100168162 387
156 3300028800 Ga0265338_10000144 Ga0265338_10000144117 387
157 3300029957 Ga0265324_10014302 Ga0265324_100143022 387
158 3300031238 Ga0265332_10001164 Ga0265332_100011642 387
159 3300031240 Ga0265320_10029006 Ga0265320_100290063 387
160 3300031247 Ga0265340_10010499 Ga0265340_100104995 387
161 3300031344 Ga0265316_10118617 Ga0265316_101186171 387
162 3300031595 Ga0265313_10011461 Ga0265313_100114615 387
163 3300031711 Ga0265314_10015542 Ga0265314_100155427 387
164 3300031712 Ga0265342_10004910 Ga0265342_1000491011 387
165 3300048917 Ga0496114_0210644 Ga0496114_0210644_352_1527 387
166 3300048922 Ga0496119_0001370 Ga0496119_0001370_8562_9740 387
167 3300049586 Ga0501070_0007551 Ga0501070_0007551_7023_8201 387
168 3300050491 nmdc:mga00v17_32662_c1 nmdc:mga00v17_32662_c1_667_1857 387
169 3300050492 nmdc:mga0yw44_7011_c1 nmdc:mga0yw44_7011_c1_4236_5411 387
170 3300005445 Ga0070708_100012281 Ga0070708_1000122815 388
171 3300005467 Ga0070706_100044461 Ga0070706_1000444612 388
172 3300005468 Ga0070707_100038256 Ga0070707_1000382562 388
173 3300005563 Ga0068855_100000569 Ga0068855_10000056934 388
174 3300006028 Ga0070717_10113944 Ga0070717_101139442 388
175 3300010375 Ga0105239_10291883 Ga0105239_102918832 388
176 3300025910 Ga0207684_10046093 Ga0207684_100460932 388
177 3300025922 Ga0207646_10057915 Ga0207646_100579152 388
178 3300025949 Ga0207667_10005569 Ga0207667_1000556912 388
179 3300047443 Ga0495687_002553 Ga0495687_002553_6989_8155 388
180 3300048911 Ga0496108_0325356 Ga0496108_0325356_98_1264 388
181 3300048917 Ga0496114_0014217 Ga0496114_0014217_4349_5518 388
182 3300048917 Ga0496114_0123487 Ga0496114_0123487_326_1495 388
183 3300048922 Ga0496119_0000905 Ga0496119_0000905_12131_13312 388
184 3300048923 Ga0496120_0002435 Ga0496120_0002435_14758_15939 388
185 3300048923 Ga0496120_0012558 Ga0496120_0012558_403_1584 388
186 3300050491 nmdc:mga00v17_59738_c1 nmdc:mga00v17_59738_c1_1146_2324 388
187 3300013105 Ga0157369_10000686 Ga0157369_100006866 389
188 3300005288 Ga0065714_10070088 Ga0065714_100700884 390
189 3300031901 Ga0307406_10000057 Ga0307406_1000005718 390
190 3300046471 Ga0495650_0004472 Ga0495650_0004472_1710_2909 390
191 iso_pu_bacteria 2902837492 2902840529 390
192 3300039437 Ga0436365_1889369 Ga0436365_1889369_45083_46261 391
193 3300048903 Ga0496100_0226275 Ga0496100_0226275_127_1317 391
194 3300048919 Ga0496116_0001135 Ga0496116_0001135_21188_22378 391
195 3300048922 Ga0496119_0022390 Ga0496119_0022390_2226_3416 391
196 3300048924 Ga0496121_0010265 Ga0496121_0010265_5616_6806 391
197 3300003792 Ga0055540_1004989 Ga0055540_10049893 394
198 3300047472 Ga0495686_0004779 Ga0495686_0004779_9691_10896 394

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02803

Thiolase_C

Thiolase, C-terminal domain

297

419

0.99

PF00108

Thiolase_N

Thiolase, N-terminal domain

5

290

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4b3j-assembly1.cif.gz_C crystal structure of mycobacterium tuberculosis fatty acid beta- oxidation complex with coenzymea bound at the hydratase and thiolase active sites 0.9457 8 392
4b3h-assembly1.cif.gz_C crystal structure of mycobacterium tuberculosis fatty acid beta- oxidation complex 0.9416 8 392
4b3j-assembly1.cif.gz_D crystal structure of mycobacterium tuberculosis fatty acid beta- oxidation complex with coenzymea bound at the hydratase and thiolase active sites 0.9402 8 392
7o1g-assembly1.cif.gz_D structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme alpha-e141a-h462a, beta-c92a mutant 0.9397 8 392
7o4v-assembly1.cif.gz_D structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with oxidized nicotinamide adenine dinucleotide 0.9388 8 392
ID Description Score Start End Superfamily
af_O53871_287_399_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9818 278 387 3.40.47.10
af_A0A096MJY8_281_393_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9802 278 386 3.40.47.10
af_P76461_265_393_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.968 266 392 3.40.47.10
af_Q55DN6_8_385_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9526 8 391 3.40.47.10
6bjaA02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9519 154 388 3.40.47.10
ID Description Score Start End GO Terms
AF-X8FAZ7-F1-model_v4 deleted 0.9975 260 392
AF-A0A4R3RGX8-F1-model_v4 deleted 0.9939 7 246
AF-A0A7J9VHY6-F1-model_v4 Acetyl-CoA C-acetyltransferase (EC 2.3.1.9) 0.9925 265 392 GO:0003985
GO:0017000
AF-A0A7W8VBF6-F1-model_v4 Acetyl-CoA acetyltransferase family protein 0.9897 175 392 GO:0016747
AF-A0A1V3WU27-F1-model_v4 Thiolase, C-terminal domain protein 0.9897 242 392 GO:0016747

Feature Viewer

pLDDT pTM Quality
96.29 0.93 High
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Predicted Structure (AlphaFold2)

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