F303139

General Info

Members Datasets Scaffolds Average Seq Length
197 163 394 473

Family's Representative Sequence

Representative Sequence 3300025934|Ga0207686_10003868|Ga0207686_100038686
Length 498
Sequence MRGYLPEHTHKTRDFEMNDHMTPPPAQGLPAPLLADLQSRFGPRLSLAAAVRDQHGRDESSFVDVAPPDAVVFAEDVADVQALLALAGKHAVPVIPFGAGSSLEGHLLAVRGGISLDVSRMNQVLAIDTADMTATVQPGVTRMQLNQALKGTGLFFPVDPGADASIGGMCATRASGTNAVRYGTMRENVLALQVVTAAGEIVHTGTRARKSSAGYDLTRLMVGSEGTLGVFTEIVVRLHPLPEAQSAAVCSFPGIAETVGAAIDIVQSGIPIARMELLDANAVRMVNRYSKLDLREGPMLLMEFHGTPASVREQAESVEALTAEHGGAAFAWATDTEERTRLWTARHHAYFAAIASMPGCRAISTDTCVPISRLAECLLESVREADEMGMPYFLVGHVGDGNFHFGYLIDPHQPEQRERAERLNAQLVARAIRLDGTCSGEHGIGMHKMDFLVQEAGLPAVELMRAIKRVFDPQDILNPGKVLWGEAGQDAPRRSWAA

Samples

Sample ID Description Type Environment
1 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
31 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
32 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
33 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
43 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
44 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
45 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
46 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
47 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
48 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
49 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
52 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
53 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
54 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
55 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
56 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
57 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
60 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
61 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
62 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
63 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
64 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
65 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
66 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
67 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
68 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
71 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
72 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
73 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
74 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
75 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
76 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
77 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
78 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
79 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
80 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
81 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
82 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
83 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
84 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
85 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
86 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
87 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
88 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
89 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
90 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
91 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
92 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
93 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
94 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
95 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
96 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
97 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
98 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
99 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
100 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
104 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
105 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
106 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
107 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
108 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
110 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
111 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
112 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
113 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
114 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
115 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
116 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
117 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
118 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
119 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
120 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
121 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
122 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
123 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
124 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
125 2511231007 Pseudomonas sp. GM18 Isolate Nodule
126 2512875026 Sinorhizobium medicae WSM1115 Isolate Nodule
127 2513237156 Sinorhizobium medicae WSM1369 Isolate Nodule
128 2517487022 Sinorhizobium medicae WSM4191 Isolate Nodule
129 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
130 2643221556 Massilia sp. Root1485 Isolate Unclassified
131 2643221684 Massilia sp. Root133 Isolate Unclassified
132 2721755523 Delftia sp. HK171 Isolate Unclassified
133 2802428858 Sinorhizobium medicae M14-1 Isolate Nodule
134 2802428860 Sinorhizobium medicae M19-1 Isolate Nodule
135 2802428861 Sinorhizobium medicae USDA1037 Isolate Nodule
136 2802428862 Sinorhizobium medicae M7-4 Isolate Nodule
137 2802428863 Sinorhizobium medicae M26-2 Isolate Nodule
138 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
139 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
140 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
141 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
142 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
143 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
144 2937036028 Sinorhizobium medicae USDA1608 Isolate Nodule
145 2937084907 Sinorhizobium medicae USDA1664 Isolate Nodule
146 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
147 2957375807 Sinorhizobium medicae USDA1632 Isolate Nodule
148 2957437181 Sinorhizobium medicae USDA1694 Isolate Nodule
149 2960591022 Sinorhizobium medicae USDA1066 Isolate Nodule
150 2960631154 Sinorhizobium medicae USDA1629 Isolate Nodule
151 2960680706 Sinorhizobium medicae USDA1150 Isolate Nodule
152 2967686174 Sinorhizobium medicae USDA1641 Isolate Nodule
153 2967728569 Sinorhizobium medicae USDA1607 Isolate Nodule
154 2970026789 Sinorhizobium medicae USDA1611 Isolate Nodule
155 2970143518 Sinorhizobium medicae USDA1652 Isolate Nodule
156 2977530762 Sinorhizobium medicae USDA1606 Isolate Nodule
157 2977544691 Sinorhizobium medicae USDA1631 Isolate Nodule
158 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
159 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
160 8003999396 Sinorhizobium medicae WSM1115 Isolate Nodule
161 8047673197 Telluria mixta LMG 11547 Isolate Rhizosphere
162 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
163 8056148874 Pseudomonas khavaziana SWRI124 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.2
Metatranscriptomes 0
Isolates 19.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.57
Nodule 12.18
Rhizoplane 2.54
Rhizosphere 69.04
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207686_10003868 3300025934 Bacteria 8031
2 rootL2_10066414 3300003322 Bacteria 8379
3 Ga0065704_10077331 3300005289 Bacteria 4775
4 Ga0070658_10046743 3300005327 Bacteria 3502
5 Ga0070670_100000231 3300005331 Bacteria 51413
6 Ga0070691_10043461 3300005341 Bacteria 2128
7 Ga0070705_100099597 3300005440 Bacteria 1832
8 Ga0070706_100004057 3300005467 Bacteria 14230
9 Ga0070706_100007522 3300005467 Bacteria 10209
10 Ga0070707_100000842 3300005468 Bacteria 30375
11 Ga0070699_100166426 3300005518 Bacteria 1953
12 Ga0070679_100028307 3300005530 Bacteria 5524
13 Ga0070697_100132429 3300005536 Bacteria 2092
14 Ga0070695_100031972 3300005545 Bacteria 3288
15 Ga0070665_100108636 3300005548 Bacteria 2776
16 Ga0070704_100001933 3300005549 Bacteria 11457
17 Ga0070664_100055774 3300005564 Bacteria 3356
18 Ga0070664_100078423 3300005564 Bacteria 2841
19 Ga0068859_100021439 3300005617 Bacteria 6485
20 Ga0068859_100125062 3300005617 Bacteria 2640
21 Ga0081455_10029314 3300005937 Bacteria 5018
22 Ga0075364_10001869 3300006051 Bacteria 11686
23 Ga0075428_100061299 3300006844 Bacteria 4120
24 Ga0075428_100194370 3300006844 Bacteria 2194
25 Ga0075431_100003037 3300006847 Bacteria 16231
26 Ga0075431_100139601 3300006847 Bacteria 2498
27 Ga0075429_100000018 3300006880 Bacteria 71039
28 Ga0097620_100021438 3300006931 Bacteria 6485
29 Ga0097620_100125062 3300006931 Bacteria 2640
30 Ga0105250_10000043 3300009092 Bacteria 129336
31 Ga0111539_10014451 3300009094 Bacteria 9851
32 Ga0105245_10163950 3300009098 Bacteria 2111
33 Ga0114129_10010633 3300009147 Bacteria 13126
34 Ga0105241_10008360 3300009174 Bacteria 7622
35 Ga0105242_10006022 3300009176 Bacteria 9351
36 Ga0157372_10258069 3300013307 Bacteria 2024
37 Ga0213876_10004749 3300021384 Bacteria 7555
38 Ga0209130_1004607 3300025284 Bacteria 5152
39 Ga0207705_10013557 3300025909 Bacteria 5883
40 Ga0207684_10003250 3300025910 Bacteria 15942
41 Ga0207684_10005864 3300025910 Bacteria 11249
42 Ga0207652_10055633 3300025921 Bacteria 3404
43 Ga0207646_10001852 3300025922 Bacteria 25512
44 Ga0207646_10002461 3300025922 Bacteria 21874
45 Ga0207694_10083193 3300025924 Bacteria 2516
46 Ga0207650_10005848 3300025925 Bacteria 8396
47 Ga0207687_10013562 3300025927 Bacteria 5320
48 Ga0207679_10046052 3300025945 Bacteria 3159
49 Ga0207674_10019402 3300026116 Bacteria 7365
50 Ga0265334_10007119 3300028573 Bacteria 4798
51 Ga0307515_10000307 3300028794 Bacteria 121172
52 Ga0265338_10049537 3300028800 Bacteria 3807
53 Ga0265340_10022297 3300031247 Bacteria 3239
54 Ga0265316_10178292 3300031344 Bacteria 1583
55 Ga0307513_10003433 3300031456 Bacteria 21486
56 Ga0316579_10012846 3300031691 Bacteria 3593
57 Ga0307409_100124163 3300031995 Bacteria 2192
58 Ga0307416_100112112 3300032002 Bacteria 2406
59 Ga0373941_0049533 3300035115 Bacteria 1330
60 Ga0373927_0005988 3300035695 Bacteria 8327
61 Ga0395899_0003732 3300037312 Bacteria 12043
62 Ga0395900_0000492 3300037418 Bacteria 55870
63 Ga0395900_0001969 3300037418 Bacteria 23192
64 Ga0395900_0005103 3300037418 Bacteria 13788
65 Ga0395900_0007001 3300037418 Bacteria 11681
66 Ga0395900_0032051 3300037418 Bacteria 5403
67 Ga0395900_0051429 3300037418 Bacteria 4244
68 Ga0395900_0149954 3300037418 Bacteria 2382
69 Ga0395898_0018282 3300037466 Bacteria 7147
70 Ga0395898_0035863 3300037466 Bacteria 4929
71 Ga0395905_0001921 3300037471 Bacteria 23863
72 Ga0395905_0050599 3300037471 Bacteria 3892
73 Ga0395905_0211171 3300037471 Bacteria 1818
74 Ga0436364_0521076 3300037853 Bacteria 2628
75 Ga0395901_0000705 3300038443 Bacteria 38150
76 Ga0395901_0006870 3300038443 Bacteria 11495
77 Ga0395901_0287615 3300038443 Bacteria 1706
78 Ga0436365_1272801 3300039437 Bacteria 8704
79 Ga0439448_0000837 3300042005 Bacteria 7490
80 Ga0439449_0003197 3300042007 Bacteria 6384
81 Ga0439450_015734 3300042008 Bacteria 1554
82 Ga0466972_0094025 3300044658 Bacteria 1421
83 Ga0466965_0001568 3300044683 Bacteria 9311
84 Ga0466965_0039588 3300044683 Bacteria 2318
85 Ga0466966_0004054 3300044684 Bacteria 9669
86 Ga0466966_0038449 3300044684 Bacteria 3084
87 Ga0466966_0043547 3300044684 Bacteria 2877
88 Ga0466964_0000173 3300044706 Bacteria 17809
89 Ga0466957_0018588 3300044842 Bacteria 4082
90 Ga0466959_0017264 3300045049 Bacteria 5288
91 Ga0466959_0081460 3300045049 Bacteria 2332
92 Ga0451576_0014344 3300045051 Bacteria 8825
93 Ga0451576_0048201 3300045051 Bacteria 4477
94 Ga0466958_0009558 3300045836 Bacteria 5407
95 Ga0466958_0026457 3300045836 Bacteria 3429
96 Ga0466967_0001306 3300045976 Bacteria 14225
97 Ga0495638_0064229 3300046460 Bacteria 2262
98 Ga0495605_0000360 3300046474 Bacteria 43679
99 Ga0495607_0002718 3300046501 Bacteria 14116
100 Ga0495607_0017704 3300046501 Bacteria 4563
101 Ga0495616_0026605 3300046513 Bacteria 3076
102 Ga0495648_0028379 3300046524 Bacteria 3729
103 Ga0495642_0002094 3300046528 Bacteria 8257
104 Ga0495597_0001326 3300046542 Bacteria 18086
105 Ga0495656_0023290 3300046615 Bacteria 2436
106 Ga0495661_0010871 3300046665 Bacteria 6189
107 Ga0495588_0000125 3300046674 Bacteria 130469
108 Ga0495589_0000687 3300046794 Bacteria 22023
109 Ga0495660_0000147 3300046810 Bacteria 76712
110 Ga0495660_0007753 3300046810 Bacteria 6308
111 Ga0495672_0000314 3300047320 Bacteria 64460
112 Ga0495683_0015857 3300047323 Bacteria 3913
113 Ga0495687_000514 3300047443 Bacteria 46468
114 Ga0495677_0002566 3300047445 Bacteria 7109
115 Ga0495626_0000022 3300048091 Bacteria 216166
116 Ga0496106_0048619 3300048909 Bacteria 3194
117 Ga0496107_0024220 3300048910 Bacteria 4294
118 Ga0496112_0261195 3300048915 Bacteria 1681
119 Ga0496115_0029457 3300048918 Bacteria 4312
120 Ga0496117_0000133 3300048920 Bacteria 161454
121 Ga0496120_0001488 3300048923 Bacteria 27804
122 Ga0496121_0071624 3300048924 Bacteria 2787
123 Ga0496122_0000565 3300048925 Bacteria 75875
124 Ga0496122_0006798 3300048925 Bacteria 12990
125 Ga0496123_0000247 3300048926 Bacteria 109186
126 Ga0496123_0001914 3300048926 Bacteria 27161
127 Ga0496124_0000637 3300048927 Bacteria 57984
128 Ga0496125_0000126 3300048928 Bacteria 166246
129 Ga0496125_0001534 3300048928 Bacteria 33114
130 Ga0496125_0003321 3300048928 Bacteria 19662
131 Ga0501038_0142120 3300049574 Bacteria 1963
132 Ga0501039_0098153 3300049575 Bacteria 2285
133 Ga0501040_0021338 3300049576 Bacteria 4325
134 Ga0501068_0032529 3300049584 Bacteria 3103
135 Ga0501070_0163628 3300049586 Bacteria 1834
136 Ga0501072_0171295 3300049588 Bacteria 1732
137 Ga0501075_0014927 3300049591 Bacteria 5572
138 Ga0501080_0000692 3300049742 Bacteria 27042
139 Ga0501035_0001170 3300049822 Bacteria 27343
140 Ga0501035_0060133 3300049822 Bacteria 3383
141 Ga0501045_0032897 3300049824 Bacteria 3759
142 nmdc:mga03683_5777_c1 3300050489 Bacteria 4200
143 nmdc:mga0k408_56447_c1 3300050493 Bacteria 2279
144 nmdc:mga07m45_25311_c1 3300050496 Bacteria 3254
145 nmdc:mga05p37_291_c1 3300050507 Bacteria 52424
146 nmdc:mga09592_198072_c1 3300050508 Bacteria 1739
147 nmdc:mga09592_88_c1 3300050508 Bacteria 54764
148 nmdc:mga06r32_3835_c1 3300050510 Bacteria 13451
149 Ga0500651_0032905 3300053093 Bacteria 3269
150 Ga0500642_0041661 3300053130 Bacteria 1987
151 Ga0500616_0024569 3300053153 Bacteria 3347
152 Ga0500622_0001250 3300053156 Bacteria 20781
153 Ga0501084_0054569 3300054114 Bacteria 3343
154 Ga0501084_0130852 3300054114 Bacteria 2112
155 Ga0590077_010316 3300059426 Bacteria 1921
156 Ga0501082_0144431 3300060353 Bacteria 2065
157 Ga0466962_0015065 3300061719 Bacteria 3728
158 Ga0530510_0077410 3300061734 Bacteria 2417
159 2511271003 2511231007 Bacteria 6306603
160 2512970752 2512875026 Bacteria 6861065
161 2513985347 2513237156 Bacteria 6402557
162 2517570276 2517487022 Bacteria 7227575
163 2561468416 2558860983 Bacteria 4133860
164 2643801268 2643221556 Bacteria 7251154
165 2644471686 2643221684 Bacteria 7145183
166 2722880880 2721755523 Bacteria 6430384
167 2802719972 2802428858 Bacteria 6636079
168 2802731902 2802428860 Bacteria 6525526
169 2802739233 2802428861 Bacteria 6534206
170 2802745786 2802428862 Bacteria 6633353
171 2802752388 2802428863 Bacteria 6410669
172 2816508839 2816332139 Bacteria 9138787
173 2839144764 2839138175 Bacteria 6549354
174 2889794913 2889790730 Bacteria 5689708
175 2889919486 2889914905 Bacteria 5702301
176 2891374301 2891373044 Bacteria 5202277
177 2932422804 2932422444 Bacteria 4678430
178 2937042610 2937036028 Bacteria 6846469
179 2937088803 2937084907 Bacteria 6618516
180 2939636805 2939631187 Bacteria 6118131
181 2957376441 2957375807 Bacteria 6425588
182 2957438926 2957437181 Bacteria 6568994
183 2960592029 2960591022 Bacteria 6622873
184 2960631990 2960631154 Bacteria 6732508
185 2960681565 2960680706 Bacteria 6624464
186 2967688912 2967686174 Bacteria 6678622
187 2967729053 2967728569 Bacteria 6641507
188 2970030385 2970026789 Bacteria 6785236
189 2970146159 2970143518 Bacteria 6446480
190 2977534377 2977530762 Bacteria 6951399
191 2977547744 2977544691 Bacteria 6875412
192 2995393071 2995392953 Bacteria 4539380
193 3003933969 3003930520 Bacteria 5667563
194 8004001740 8003999396 Bacteria 7063185
195 8047675894 8047673197 Bacteria 7395230
196 8054561311 8054558443 Bacteria 5204801
197 8056154670 8056148874 Bacteria 6479865
198 Ga0207686_10003868
199 rootL2_10066414
200 Ga0065704_10077331
201 Ga0070658_10046743
202 Ga0070670_100000231
203 Ga0070691_10043461
204 Ga0070705_100099597
205 Ga0070706_100004057
206 Ga0070706_100007522
207 Ga0070707_100000842
208 Ga0070699_100166426
209 Ga0070679_100028307
210 Ga0070697_100132429
211 Ga0070695_100031972
212 Ga0070665_100108636
213 Ga0070704_100001933
214 Ga0070664_100055774
215 Ga0070664_100078423
216 Ga0068859_100021439
217 Ga0068859_100125062
218 Ga0081455_10029314
219 Ga0075364_10001869
220 Ga0075428_100061299
221 Ga0075428_100194370
222 Ga0075431_100003037
223 Ga0075431_100139601
224 Ga0075429_100000018
225 Ga0097620_100021438
226 Ga0097620_100125062
227 Ga0105250_10000043
228 Ga0111539_10014451
229 Ga0105245_10163950
230 Ga0114129_10010633
231 Ga0105241_10008360
232 Ga0105242_10006022
233 Ga0157372_10258069
234 Ga0213876_10004749
235 Ga0209130_1004607
236 Ga0207705_10013557
237 Ga0207684_10003250
238 Ga0207684_10005864
239 Ga0207652_10055633
240 Ga0207646_10001852
241 Ga0207646_10002461
242 Ga0207694_10083193
243 Ga0207650_10005848
244 Ga0207687_10013562
245 Ga0207679_10046052
246 Ga0207674_10019402
247 Ga0265334_10007119
248 Ga0307515_10000307
249 Ga0265338_10049537
250 Ga0265340_10022297
251 Ga0265316_10178292
252 Ga0307513_10003433
253 Ga0316579_10012846
254 Ga0307409_100124163
255 Ga0307416_100112112
256 Ga0373941_0049533
257 Ga0373927_0005988
258 Ga0395899_0003732
259 Ga0395900_0000492
260 Ga0395900_0001969
261 Ga0395900_0005103
262 Ga0395900_0007001
263 Ga0395900_0032051
264 Ga0395900_0051429
265 Ga0395900_0149954
266 Ga0395898_0018282
267 Ga0395898_0035863
268 Ga0395905_0001921
269 Ga0395905_0050599
270 Ga0395905_0211171
271 Ga0436364_0521076
272 Ga0395901_0000705
273 Ga0395901_0006870
274 Ga0395901_0287615
275 Ga0436365_1272801
276 Ga0439448_0000837
277 Ga0439449_0003197
278 Ga0439450_015734
279 Ga0466972_0094025
280 Ga0466965_0001568
281 Ga0466965_0039588
282 Ga0466966_0004054
283 Ga0466966_0038449
284 Ga0466966_0043547
285 Ga0466964_0000173
286 Ga0466957_0018588
287 Ga0466959_0017264
288 Ga0466959_0081460
289 Ga0451576_0014344
290 Ga0451576_0048201
291 Ga0466958_0009558
292 Ga0466958_0026457
293 Ga0466967_0001306
294 Ga0495638_0064229
295 Ga0495605_0000360
296 Ga0495607_0002718
297 Ga0495607_0017704
298 Ga0495616_0026605
299 Ga0495648_0028379
300 Ga0495642_0002094
301 Ga0495597_0001326
302 Ga0495656_0023290
303 Ga0495661_0010871
304 Ga0495588_0000125
305 Ga0495589_0000687
306 Ga0495660_0000147
307 Ga0495660_0007753
308 Ga0495672_0000314
309 Ga0495683_0015857
310 Ga0495687_000514
311 Ga0495677_0002566
312 Ga0495626_0000022
313 Ga0496106_0048619
314 Ga0496107_0024220
315 Ga0496112_0261195
316 Ga0496115_0029457
317 Ga0496117_0000133
318 Ga0496120_0001488
319 Ga0496121_0071624
320 Ga0496122_0000565
321 Ga0496122_0006798
322 Ga0496123_0000247
323 Ga0496123_0001914
324 Ga0496124_0000637
325 Ga0496125_0000126
326 Ga0496125_0001534
327 Ga0496125_0003321
328 Ga0501038_0142120
329 Ga0501039_0098153
330 Ga0501040_0021338
331 Ga0501068_0032529
332 Ga0501070_0163628
333 Ga0501072_0171295
334 Ga0501075_0014927
335 Ga0501080_0000692
336 Ga0501035_0001170
337 Ga0501035_0060133
338 Ga0501045_0032897
339 nmdc:mga03683_5777_c1
340 nmdc:mga0k408_56447_c1
341 nmdc:mga07m45_25311_c1
342 nmdc:mga05p37_291_c1
343 nmdc:mga09592_198072_c1
344 nmdc:mga09592_88_c1
345 nmdc:mga06r32_3835_c1
346 Ga0500651_0032905
347 Ga0500642_0041661
348 Ga0500616_0024569
349 Ga0500622_0001250
350 Ga0501084_0054569
351 Ga0501084_0130852
352 Ga0590077_010316
353 Ga0501082_0144431
354 Ga0466962_0015065
355 Ga0530510_0077410
356 2511271003
357 2512970752
358 2513985347
359 2517570276
360 2561468416
361 2643801268
362 2644471686
363 2722880880
364 2802719972
365 2802731902
366 2802739233
367 2802745786
368 2802752388
369 2816508839
370 2839144764
371 2889794913
372 2889919486
373 2891374301
374 2932422804
375 2937042610
376 2937088803
377 2939636805
378 2957376441
379 2957438926
380 2960592029
381 2960631990
382 2960681565
383 2967688912
384 2967729053
385 2970030385
386 2970146159
387 2977534377
388 2977547744
389 2995393071
390 3003933969
391 8004001740
392 8047675894
393 8054561311
394 8056154670

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02913

FAD-oxidase_C

FAD linked oxidases, C-terminal domain

241

482

0.99

PF01565

FAD_binding_4

FAD binding domain

68

205

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
8jdo-assembly1.cif.gz_A crystal structure of h405a mldhd in complex with d-2-hydroxyhexanoic acid 0.9573 9 462
8jds-assembly1.cif.gz_A crystal structure of mldhd in complex with pyruvate 0.9567 9 462
8jdt-assembly1.cif.gz_A crystal structure of mldhd in complex with 2-ketobutanoic acid 0.9545 9 462
8jdc-assembly1.cif.gz_A crystal structure of mldhd in apo form 0.9544 9 462
8jdx-assembly1.cif.gz_A crystal structure of mldhd in complex with 2-ketoisovaleric acid 0.9543 9 462
ID Description Score Start End Superfamily
af_Q7TPJ4_275_344_3.30.70.2190 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9914 243 311 3.30.70.2190
af_Q7TNG8_361_443_3.30.70.2740 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9797 341 420 3.30.70.2740
af_Q86WU2_267_377_3.30.70.2190 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9769 223 333 3.30.70.2190
af_Q55BQ4_423_504_3.30.70.2740 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9686 341 420 3.30.70.2740
af_Q86WU2_267_377_3.30.70.2190 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9684 223 333 3.30.70.2190
ID Description Score Start End GO Terms
AF-A0A436FTH0-F1-model_v4 FAD-binding oxidoreductase 0.9744 165 466 GO:0004458
GO:0008720
GO:0071949
GO:1903457
AF-A0A521LG04-F1-model_v4 D-lactate dehydrogenase (cytochrome) (EC 1.1.2.4) 0.9725 97 462 GO:0004458
GO:0008720
GO:0071949
GO:1903457
AF-A0A803RAW2-F1-model_v4 FAD-binding oxidoreductase/transferase type 4 C-terminal domain-containing protein 0.9719 259 464 GO:0004458
GO:0005739
GO:0008720
GO:0050660
GO:1903457
AF-A0A436FTH0-F1-model_v4 FAD-binding oxidoreductase 0.9712 165 466 GO:0004458
GO:0008720
GO:0071949
GO:1903457
AF-A0A2R6PCU0-F1-model_v4 FAD-binding oxidoreductase/transferase type 4 C-terminal domain-containing protein 0.9692 284 462 GO:0004458
GO:0005739
GO:0008720
GO:0050660
GO:1903457

Map