F302807

General Info

Members Datasets Scaffolds Average Seq Length
197 118 394 428

Family's Representative Sequence

Representative Sequence 3300005983|Ga0081540_1012330|Ga0081540_10123303
Length 459
Sequence MWMTGSGAPPTYQSKWRGSVFETVGVVGMGYVGLTLTAALARKGFTVYGADVSPAVVESLVRGRPHIFEPGVEEAFAEFANRSIFVDTGLPLDTVDVAVICVSTPVDEKTRMPVLQNLEAAAMHVAQTCRPGTLVVVRSTVPVGTTRSVVLPILMAEWGCARLVMAPERTIQGQALRELVELPQVVGGLDDQSLWAGLEFFSDLAASVMPVSSMEAAELVKLANNCHTDLIYAYGNEIALLAERHGIDPLEVIRAANLDYPRPDLAKPGFVGGGCLSKDPYLMISSFGYHEPYLVRRSRQLNEYLPLYAALRVVQMIRTERGDTAGARLAVLGWAYKGWPPTDDMRGAPIVAMMPVFTAAGITVLGHDPMVSAEVIRQYGGEPVSLDKAFADSDAVLVLNDHPDYRAIHLESVLGADPPKAIYDAWRVLDEQAIVAAGVRYAGLGYVANPPAAAPEPVA

Samples

Sample ID Description Type Environment
1 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
51 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
54 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
55 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
56 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
57 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
58 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
59 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
60 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
61 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
62 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
63 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
64 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
67 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
68 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
69 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
70 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
71 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
72 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
73 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
74 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
75 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
76 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
77 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
78 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
79 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
82 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
83 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
84 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
96 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
97 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
98 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
99 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
100 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
101 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
102 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
103 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
104 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
105 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
106 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
107 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
108 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
109 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
110 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
111 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
112 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
113 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
114 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
115 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
116 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
117 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
118 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.97
Metatranscriptomes 0
Isolates 2.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.51
Rhizosphere 94.92
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081540_1012330 3300005983 Bacteria 5639
2 JGI25406J46586_10015064 3300003203 Bacteria 3270
3 rootH2_10059777 3300003320 Bacteria 3371
4 Ga0070683_100002437 3300005329 Bacteria 14792
5 Ga0068869_100003794 3300005334 Bacteria 9312
6 Ga0068869_100024840 3300005334 Bacteria 4154
7 Ga0070692_10005757 3300005345 Bacteria 5324
8 Ga0070668_100000616 3300005347 Bacteria 23872
9 Ga0070710_10001309 3300005437 Bacteria 11767
10 Ga0070701_10006859 3300005438 Bacteria 4820
11 Ga0070705_100006745 3300005440 Bacteria 5647
12 Ga0070705_100016509 3300005440 Bacteria 3837
13 Ga0070705_100037267 3300005440 Bacteria 2741
14 Ga0070694_100058436 3300005444 Bacteria 2624
15 Ga0070706_100025865 3300005467 Bacteria 5401
16 Ga0070706_100079479 3300005467 Bacteria 3035
17 Ga0070707_100002645 3300005468 Bacteria 17038
18 Ga0070707_100030636 3300005468 Bacteria 5123
19 Ga0070698_100065017 3300005471 Bacteria 3674
20 Ga0070684_100029381 3300005535 Bacteria 4658
21 Ga0070697_100195390 3300005536 Bacteria 1718
22 Ga0070697_100258787 3300005536 Bacteria 1489
23 Ga0070695_100002586 3300005545 Bacteria 10446
24 Ga0070704_100178688 3300005549 Bacteria 1695
25 Ga0068857_100045768 3300005577 Bacteria 3882
26 Ga0068858_100016394 3300005842 Bacteria 6956
27 Ga0068862_100021970 3300005844 Bacteria 5336
28 Ga0081538_10032157 3300005981 Bacteria 3524
29 Ga0081540_1044639 3300005983 Bacteria 2260
30 Ga0081539_10000141 3300005985 Bacteria 166050
31 Ga0081539_10001649 3300005985 Bacteria 36245
32 Ga0081539_10002328 3300005985 Bacteria 27352
33 Ga0075432_10016638 3300006058 Bacteria 2510
34 Ga0070712_100130003 3300006175 Bacteria 1907
35 Ga0075428_100000773 3300006844 Bacteria 33312
36 Ga0075428_100001827 3300006844 Bacteria 22783
37 Ga0075428_100030375 3300006844 Bacteria 5976
38 Ga0075428_100147146 3300006844 Bacteria 2560
39 Ga0075428_100164772 3300006844 Bacteria 2405
40 Ga0075430_100000949 3300006846 Bacteria 22797
41 Ga0075430_100105067 3300006846 Bacteria 2357
42 Ga0075431_100000912 3300006847 Bacteria 26037
43 Ga0075431_100001041 3300006847 Bacteria 24739
44 Ga0075431_100012274 3300006847 Bacteria 8646
45 Ga0075431_100068554 3300006847 Bacteria 3661
46 Ga0075431_100105835 3300006847 Bacteria 2902
47 Ga0075431_100107905 3300006847 Bacteria 2873
48 Ga0075433_10000249 3300006852 Bacteria 31205
49 Ga0075433_10002431 3300006852 Bacteria 14170
50 Ga0075433_10014544 3300006852 Bacteria 6434
51 Ga0075433_10019230 3300006852 Bacteria 5687
52 Ga0075434_100003677 3300006871 Bacteria 13703
53 Ga0075434_100009631 3300006871 Bacteria 9025
54 Ga0075434_100011282 3300006871 Bacteria 8416
55 Ga0075434_100098765 3300006871 Bacteria 2925
56 Ga0075434_100105158 3300006871 Bacteria 2833
57 Ga0075434_100156157 3300006871 Bacteria 2301
58 Ga0075429_100000882 3300006880 Bacteria 23700
59 Ga0075429_100002062 3300006880 Bacteria 16745
60 Ga0075429_100020498 3300006880 Bacteria 5737
61 Ga0075436_100002122 3300006914 Bacteria 13682
62 Ga0075435_100001297 3300007076 Bacteria 16072
63 Ga0075435_100004533 3300007076 Bacteria 9553
64 Ga0075435_100056537 3300007076 Bacteria 3172
65 Ga0111539_10001127 3300009094 Bacteria 35338
66 Ga0111539_10001468 3300009094 Bacteria 31504
67 Ga0111539_10019852 3300009094 Bacteria 8281
68 Ga0114129_10000207 3300009147 Bacteria 65630
69 Ga0114129_10000810 3300009147 Bacteria 40217
70 Ga0114129_10009840 3300009147 Bacteria 13636
71 Ga0114129_10029098 3300009147 Bacteria 7825
72 Ga0114129_10053638 3300009147 Bacteria 5655
73 Ga0114129_10081691 3300009147 Bacteria 4492
74 Ga0105241_10143130 3300009174 Bacteria 1949
75 Ga0105242_10000659 3300009176 Bacteria 27029
76 Ga0105249_10117325 3300009553 Bacteria 2524
77 Ga0207692_10000736 3300025898 Bacteria 11557
78 Ga0207684_10231830 3300025910 Bacteria 1593
79 Ga0207693_10006742 3300025915 Bacteria 9481
80 Ga0207660_10028445 3300025917 Bacteria 3823
81 Ga0207646_10015736 3300025922 Bacteria 7127
82 Ga0207706_10031047 3300025933 Bacteria 4762
83 Ga0207689_10013310 3300025942 Bacteria 7018
84 Ga0207689_10026967 3300025942 Bacteria 4810
85 Ga0207661_10029208 3300025944 Bacteria 4232
86 Ga0207668_10000764 3300025972 Bacteria 19659
87 Ga0207641_10199163 3300026088 Bacteria 1845
88 Ga0207675_100240362 3300026118 Bacteria 1750
89 Ga0207428_10000035 3300027907 Bacteria 229100
90 Ga0207428_10000477 3300027907 Bacteria 48330
91 Ga0207428_10026083 3300027907 Bacteria 4882
92 Ga0268265_10012354 3300028380 Bacteria 5786
93 Ga0268265_10013876 3300028380 Bacteria 5484
94 Ga0268265_10075278 3300028380 Bacteria 2644
95 Ga0268264_10009258 3300028381 Bacteria 8154
96 Ga0307515_10000027 3300028794 Bacteria 371624
97 Ga0307512_10008808 3300030522 Bacteria 9792
98 Ga0316176_1185797 3300030732 Bacteria 1956
99 Ga0307513_10045745 3300031456 Bacteria 4780
100 Ga0307408_100006953 3300031548 Bacteria 7491
101 Ga0307508_10000627 3300031616 Bacteria 42456
102 Ga0307516_10002815 3300031730 Bacteria 22928
103 Ga0307516_10020678 3300031730 Bacteria 6796
104 Ga0307516_10023917 3300031730 Bacteria 6249
105 Ga0307405_10007205 3300031731 Bacteria 5539
106 Ga0307405_10031758 3300031731 Bacteria 3113
107 Ga0307413_10078879 3300031824 Bacteria 2103
108 Ga0307410_10013824 3300031852 Bacteria 4725
109 Ga0326468_10000041 3300031889 Bacteria 9864
110 Ga0307406_10006679 3300031901 Bacteria 6380
111 Ga0307416_100002057 3300032002 Bacteria 11331
112 Ga0307416_100116335 3300032002 Bacteria 2370
113 Ga0307411_10044934 3300032005 Bacteria 2838
114 Ga0307411_10086609 3300032005 Bacteria 2173
115 Ga0307415_100000027 3300032126 Bacteria 61974
116 Ga0307415_100050180 3300032126 Bacteria 2826
117 Ga0307415_100129195 3300032126 Bacteria 1909
118 Ga0373939_0012892 3300035114 Bacteria 2140
119 Ga0373941_0008004 3300035115 Bacteria 2609
120 Ga0373942_0001094 3300035207 Bacteria 7253
121 Ga0373962_0001448 3300035242 Bacteria 5615
122 Ga0373935_0048976 3300035692 Bacteria 2677
123 Ga0451577_0026365 3300042876 Bacteria 5264
124 Ga0451577_0043276 3300042876 Bacteria 4034
125 Ga0466972_0000831 3300044658 Bacteria 14787
126 Ga0466965_0028956 3300044683 Bacteria 2693
127 Ga0453684_0448486 3300044712 Bacteria 1436
128 Ga0466960_0002847 3300044901 Bacteria 6563
129 Ga0451576_0008734 3300045051 Bacteria 11857
130 Ga0451576_0010675 3300045051 Bacteria 10522
131 Ga0451576_0052744 3300045051 Bacteria 4261
132 Ga0466958_0017857 3300045836 Bacteria 4109
133 Ga0466967_0100545 3300045976 Bacteria 2642
134 Ga0495580_0000359 3300046472 Bacteria 37195
135 Ga0495580_0074592 3300046472 Bacteria 2368
136 Ga0495580_0091970 3300046472 Bacteria 2111
137 Ga0495584_0069422 3300046491 Bacteria 1771
138 Ga0496108_0000078 3300048911 Bacteria 104086
139 Ga0501032_0034051 3300049569 Bacteria 3488
140 Ga0501033_0038617 3300049570 Bacteria 3568
141 Ga0501036_0021988 3300049572 Bacteria 5363
142 Ga0501038_0023060 3300049574 Bacteria 5570
143 Ga0501038_0173331 3300049574 Bacteria 1745
144 Ga0501039_0108968 3300049575 Bacteria 2165
145 Ga0501040_0010433 3300049576 Bacteria 6075
146 Ga0501041_0015976 3300049577 Bacteria 4460
147 Ga0501041_0047092 3300049577 Bacteria 2625
148 Ga0501042_0003418 3300049578 Bacteria 9970
149 Ga0501043_0080385 3300049579 Bacteria 2561
150 Ga0501046_0004004 3300049580 Bacteria 13454
151 Ga0501046_0220479 3300049580 Bacteria 1404
152 Ga0501048_0013890 3300049582 Bacteria 5972
153 Ga0501071_0007650 3300049587 Bacteria 7120
154 Ga0501072_0021985 3300049588 Bacteria 4947
155 Ga0501075_0023411 3300049591 Bacteria 4522
156 Ga0501075_0115349 3300049591 Bacteria 2042
157 Ga0501076_0005212 3300049592 Bacteria 9313
158 Ga0501077_0096930 3300049593 Bacteria 1869
159 Ga0501079_0004730 3300049741 Bacteria 10081
160 Ga0501080_0467708 3300049742 Bacteria 1129
161 Ga0501081_0013131 3300049743 Bacteria 5447
162 Ga0501045_0006390 3300049824 Bacteria 8160
163 nmdc:mga05p37_1750_c1 3300050507 Bacteria 25352
164 nmdc:mga05p37_30635_c1 3300050507 Bacteria 6565
165 nmdc:mga05p37_396359_c1 3300050507 Bacteria 1613
166 nmdc:mga09592_1206_c1 3300050508 Bacteria 20717
167 nmdc:mga09592_17112_c1 3300050508 Bacteria 5936
168 nmdc:mga09592_5422_c1 3300050508 Bacteria 10368
169 nmdc:mga0qj67_5376_c1 3300050509 Bacteria 9345
170 nmdc:mga06r32_1882_c2 3300050510 Bacteria 14815
171 nmdc:mga06r32_22525_c1 3300050510 Bacteria 5824
172 nmdc:mga06r32_301_c1 3300050510 Bacteria 40902
173 nmdc:mga06r32_39083_c1 3300050510 Bacteria 4501
174 nmdc:mga06r32_83408_c1 3300050510 Bacteria 3114
175 nmdc:mga08y16_42547_c1 3300050511 Bacteria 4758
176 nmdc:mga08y16_589_c1 3300050511 Bacteria 33849
177 nmdc:mga0n895_11083_c1 3300050512 Bacteria 8021
178 nmdc:mga0n895_19115_c1 3300050512 Bacteria 6361
179 nmdc:mga0n895_21881_c1 3300050512 Bacteria 5988
180 nmdc:mga0n895_26805_c1 3300050512 Bacteria 5466
181 nmdc:mga0n895_75223_c1 3300050512 Bacteria 3357
182 nmdc:mga0rr50_31687_c1 3300050513 Bacteria 3759
183 nmdc:mga0rr50_42086_c1 3300050513 Bacteria 3333
184 nmdc:mga0rr50_8642_c1 3300050513 Bacteria 6348
185 nmdc:mga0rr50_91657_c1 3300050513 Bacteria 2368
186 nmdc:mga0a205_1794_c1 3300050515 Bacteria 17954
187 nmdc:mga0a205_208_c1 3300050515 Bacteria 41024
188 nmdc:mga0a205_7384_c1 3300050515 Bacteria 9254
189 Ga0501084_0008533 3300054114 Bacteria 8470
190 Ga0501084_0124718 3300054114 Bacteria 2167
191 Ga0501082_0004905 3300060353 Bacteria 11667
192 Ga0501082_0216871 3300060353 Bacteria 1665
193 Ga0530510_0002896 3300061734 Bacteria 11768
194 2676482521 2675903059 Bacteria 8644972
195 2676494926 2675903060 Bacteria 10051191
196 2753265839 2751185782 Bacteria 11227053
197 2899365003 2899359706 Bacteria 10940472
198 Ga0081540_1012330
199 JGI25406J46586_10015064
200 rootH2_10059777
201 Ga0070683_100002437
202 Ga0068869_100003794
203 Ga0068869_100024840
204 Ga0070692_10005757
205 Ga0070668_100000616
206 Ga0070710_10001309
207 Ga0070701_10006859
208 Ga0070705_100006745
209 Ga0070705_100016509
210 Ga0070705_100037267
211 Ga0070694_100058436
212 Ga0070706_100025865
213 Ga0070706_100079479
214 Ga0070707_100002645
215 Ga0070707_100030636
216 Ga0070698_100065017
217 Ga0070684_100029381
218 Ga0070697_100195390
219 Ga0070697_100258787
220 Ga0070695_100002586
221 Ga0070704_100178688
222 Ga0068857_100045768
223 Ga0068858_100016394
224 Ga0068862_100021970
225 Ga0081538_10032157
226 Ga0081540_1044639
227 Ga0081539_10000141
228 Ga0081539_10001649
229 Ga0081539_10002328
230 Ga0075432_10016638
231 Ga0070712_100130003
232 Ga0075428_100000773
233 Ga0075428_100001827
234 Ga0075428_100030375
235 Ga0075428_100147146
236 Ga0075428_100164772
237 Ga0075430_100000949
238 Ga0075430_100105067
239 Ga0075431_100000912
240 Ga0075431_100001041
241 Ga0075431_100012274
242 Ga0075431_100068554
243 Ga0075431_100105835
244 Ga0075431_100107905
245 Ga0075433_10000249
246 Ga0075433_10002431
247 Ga0075433_10014544
248 Ga0075433_10019230
249 Ga0075434_100003677
250 Ga0075434_100009631
251 Ga0075434_100011282
252 Ga0075434_100098765
253 Ga0075434_100105158
254 Ga0075434_100156157
255 Ga0075429_100000882
256 Ga0075429_100002062
257 Ga0075429_100020498
258 Ga0075436_100002122
259 Ga0075435_100001297
260 Ga0075435_100004533
261 Ga0075435_100056537
262 Ga0111539_10001127
263 Ga0111539_10001468
264 Ga0111539_10019852
265 Ga0114129_10000207
266 Ga0114129_10000810
267 Ga0114129_10009840
268 Ga0114129_10029098
269 Ga0114129_10053638
270 Ga0114129_10081691
271 Ga0105241_10143130
272 Ga0105242_10000659
273 Ga0105249_10117325
274 Ga0207692_10000736
275 Ga0207684_10231830
276 Ga0207693_10006742
277 Ga0207660_10028445
278 Ga0207646_10015736
279 Ga0207706_10031047
280 Ga0207689_10013310
281 Ga0207689_10026967
282 Ga0207661_10029208
283 Ga0207668_10000764
284 Ga0207641_10199163
285 Ga0207675_100240362
286 Ga0207428_10000035
287 Ga0207428_10000477
288 Ga0207428_10026083
289 Ga0268265_10012354
290 Ga0268265_10013876
291 Ga0268265_10075278
292 Ga0268264_10009258
293 Ga0307515_10000027
294 Ga0307512_10008808
295 Ga0316176_1185797
296 Ga0307513_10045745
297 Ga0307408_100006953
298 Ga0307508_10000627
299 Ga0307516_10002815
300 Ga0307516_10020678
301 Ga0307516_10023917
302 Ga0307405_10007205
303 Ga0307405_10031758
304 Ga0307413_10078879
305 Ga0307410_10013824
306 Ga0326468_10000041
307 Ga0307406_10006679
308 Ga0307416_100002057
309 Ga0307416_100116335
310 Ga0307411_10044934
311 Ga0307411_10086609
312 Ga0307415_100000027
313 Ga0307415_100050180
314 Ga0307415_100129195
315 Ga0373939_0012892
316 Ga0373941_0008004
317 Ga0373942_0001094
318 Ga0373962_0001448
319 Ga0373935_0048976
320 Ga0451577_0026365
321 Ga0451577_0043276
322 Ga0466972_0000831
323 Ga0466965_0028956
324 Ga0453684_0448486
325 Ga0466960_0002847
326 Ga0451576_0008734
327 Ga0451576_0010675
328 Ga0451576_0052744
329 Ga0466958_0017857
330 Ga0466967_0100545
331 Ga0495580_0000359
332 Ga0495580_0074592
333 Ga0495580_0091970
334 Ga0495584_0069422
335 Ga0496108_0000078
336 Ga0501032_0034051
337 Ga0501033_0038617
338 Ga0501036_0021988
339 Ga0501038_0023060
340 Ga0501038_0173331
341 Ga0501039_0108968
342 Ga0501040_0010433
343 Ga0501041_0015976
344 Ga0501041_0047092
345 Ga0501042_0003418
346 Ga0501043_0080385
347 Ga0501046_0004004
348 Ga0501046_0220479
349 Ga0501048_0013890
350 Ga0501071_0007650
351 Ga0501072_0021985
352 Ga0501075_0023411
353 Ga0501075_0115349
354 Ga0501076_0005212
355 Ga0501077_0096930
356 Ga0501079_0004730
357 Ga0501080_0467708
358 Ga0501081_0013131
359 Ga0501045_0006390
360 nmdc:mga05p37_1750_c1
361 nmdc:mga05p37_30635_c1
362 nmdc:mga05p37_396359_c1
363 nmdc:mga09592_1206_c1
364 nmdc:mga09592_17112_c1
365 nmdc:mga09592_5422_c1
366 nmdc:mga0qj67_5376_c1
367 nmdc:mga06r32_1882_c2
368 nmdc:mga06r32_22525_c1
369 nmdc:mga06r32_301_c1
370 nmdc:mga06r32_39083_c1
371 nmdc:mga06r32_83408_c1
372 nmdc:mga08y16_42547_c1
373 nmdc:mga08y16_589_c1
374 nmdc:mga0n895_11083_c1
375 nmdc:mga0n895_19115_c1
376 nmdc:mga0n895_21881_c1
377 nmdc:mga0n895_26805_c1
378 nmdc:mga0n895_75223_c1
379 nmdc:mga0rr50_31687_c1
380 nmdc:mga0rr50_42086_c1
381 nmdc:mga0rr50_8642_c1
382 nmdc:mga0rr50_91657_c1
383 nmdc:mga0a205_1794_c1
384 nmdc:mga0a205_208_c1
385 nmdc:mga0a205_7384_c1
386 Ga0501084_0008533
387 Ga0501084_0124718
388 Ga0501082_0004905
389 Ga0501082_0216871
390 Ga0530510_0002896
391 2676482521
392 2676494926
393 2753265839
394 2899365003

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03720

UDPG_MGDP_dh_C

UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain

330

431

0.95

PF03721

UDPG_MGDP_dh_N

UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

22

199

0.94

PF00984

UDPG_MGDP_dh

UDP-glucose/GDP-mannose dehydrogenase family, central domain

215

304

0.92

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

23

153

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ka7-assembly1.cif.gz_A crystal structure of an oxidoreductase from methanosarcina mazei. northeast structural genomics consortium target id mar208 0.9893 3 35
3nrn-assembly1.cif.gz_A crystal structure of pf1083 protein from pyrococcus furiosus, northeast structural genomics consortium target pfr223 0.9855 3 35
4j36-assembly1.cif.gz_A cocrystal structure of kynurenine 3-monooxygenase in complex with upf 648 inhibitor(kmo-394upf) 0.9847 3 35
1sez-assembly1.cif.gz_A crystal structure of protoporphyrinogen ix oxidase 0.977 3 34
6lkd-assembly1.cif.gz_A in meso full-length rat kmo in complex with a pyrazoyl benzoic acid inhibitor 0.9757 2 34
ID Description Score Start End Superfamily
af_B0G160_35_582_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 1.011 5 32 3.50.50.60
af_Q58582_1_364_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9699 3 35 3.50.50.60
af_A4HWA7_1_176_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9696 3 35 3.50.50.60
af_P49086_94_556_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9658 1 35 3.50.50.60
af_C0H4M9_5_398_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9605 3 31 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A539DXF3-F1-model_v4 UDP-glucose/GDP-mannose dehydrogenase 0.9859 3 146 GO:0000271
GO:0016616
GO:0016628
GO:0051287
AF-A0A521SBV5-F1-model_v4 Nucleotide sugar dehydrogenase 0.9624 3 430 GO:0000271
GO:0016616
GO:0016628
GO:0051287
AF-A0A539DXF3-F1-model_v4 UDP-glucose/GDP-mannose dehydrogenase 0.9596 3 146 GO:0000271
GO:0016616
GO:0016628
GO:0051287
AF-F9CY94-F1-model_v4 UDP-N-acetyl-D-mannosamine dehydrogenase (EC 1.1.1.336) (UDP-ManNAc 6-dehydrogenase) 0.9595 3 427 GO:0000271
GO:0016628
GO:0051287
GO:0089714
AF-A0A6V8L3G1-F1-model_v4 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain-containing protein 0.9583 146 431 GO:0000271
GO:0016616
GO:0016628
GO:0051287

Map