F302756

General Info

Members Datasets Scaffolds Average Seq Length
197 137 195 629

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100000197|Ga0068856_10000019738
Length 677
Sequence MAGRASLGCRNAKRYLSGAGFRPPAAWTFRAGRLLNCLRDQAATKLSENPTDDVGDQARQPPQGSRPVLGLTALGIVFGDIGTSPLYTFKTILGTAEAPSDPATVLGALSLVFWTLFIVTTVKYVLFAMRVDNDGEGGILALMALLGVKKQQRPTIVAVGLFGAALIYGDGAITPAISVLSALEGLNMATPAMQPYVVPAAVAILLALFAIQSQGTARIGHFFGPVMLLWFAAIALMGISGIVRHPAVFAALNPAYGLVYLFSHGATGFLVLGAVFLCVTGAEALYADMGHFGRGPIKLAWFAIVFPSLILNYAGQAALVLEGTPTDGNIFFRLCPPMLLIPLVVLATVATIIASQSIITGAFSMTRQAIQLGWLPRLRIKQTSSEGYGQIYVGVVNWLLMIVTVGLAIGFGKSDNLAAAYGIAVSLTMLMTSALLFIAMRDIWRWNLLAAGAVAAFFLVIDSAFFLANLTKIADGGYVPLILAVSIYAVMWIWHRGWAAVMARMHETLIPVEQFMQIIQAKNVPRVPGTAVFLTRAERDTPPVMQWHVRHNRALHEHLFVLRVEILPVPWLSSGERIKIQQIVPNFWRAEARFGFMERPHIPELLTAGKSLGCTVDLDDVTYYVGHETVIGREDGRGLPAWQEAFFAVMERNAIHVSDFFSLPSDQVVEIGRQVSI

Samples

Sample ID Description Type Environment
1 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
2 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
7 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
8 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
9 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
10 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
11 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
36 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
47 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
48 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
50 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
51 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
53 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
54 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
56 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
57 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
73 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
74 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
75 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
76 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
77 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
78 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
79 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
80 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
81 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
82 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
83 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
90 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
91 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
92 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
93 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
94 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
95 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
96 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
97 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
98 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
99 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
100 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
101 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
102 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
103 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
104 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
105 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
106 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
107 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
108 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
109 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
112 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
113 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
114 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
121 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
122 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
123 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
124 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
125 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
126 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
127 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
128 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
129 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
130 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
131 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
132 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
133 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
134 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
135 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
136 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
137 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.98
Metatranscriptomes 0
Isolates 1.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.71
Nodule 1.02
Rhizoplane 3.55
Rhizosphere 70.05
Stem 0
Stem Tuber 0
Unclassified 11.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000348 3300002737 Bacteria 39681
2 JGI25154J39366_1005270 3300002738 Bacteria 2098
3 JGI25157J39369_1000254 3300002741 Bacteria 39681
4 JGI25163J39215_1000463 3300002771 Bacteria 12299
5 JGI25164J39214_1000262 3300002772 Bacteria 39681
6 JGI25165J46597_1000219 3300003214 Bacteria 79946
7 JGI25165J46597_1000472 3300003214 Bacteria 39681
8 Ga0055535_1000423 3300003761 Bacteria 39681
9 Ga0055542_1000443 3300003762 Bacteria 39681
10 Ga0055529_1000458 3300003763 Bacteria 39681
11 Ga0070683_100002390 3300005329 Bacteria 14902
12 Ga0070709_10002478 3300005434 Bacteria 10002
13 Ga0070709_10006358 3300005434 Bacteria 6434
14 Ga0070714_100031677 3300005435 Bacteria 4414
15 Ga0070713_100001366 3300005436 Bacteria 15607
16 Ga0070713_100016738 3300005436 Bacteria 5520
17 Ga0070713_100020896 3300005436 Bacteria 5026
18 Ga0070710_10003427 3300005437 Bacteria 7511
19 Ga0070711_100050287 3300005439 Bacteria 2857
20 Ga0070694_100026203 3300005444 Unclassified 3777
21 Ga0070685_10004475 3300005466 Bacteria 7071
22 Ga0070706_100037195 3300005467 Bacteria 4496
23 Ga0070706_100067550 3300005467 Bacteria 3306
24 Ga0070706_100075795 3300005467 Bacteria 3113
25 Ga0070707_100020963 3300005468 Bacteria 6171
26 Ga0070698_100084794 3300005471 Bacteria 3156
27 Ga0070698_100189031 3300005471 Bacteria 1997
28 Ga0070699_100051352 3300005518 Bacteria 3569
29 Ga0070699_100079947 3300005518 Bacteria 2849
30 Ga0070697_100062797 3300005536 Bacteria 3032
31 Ga0070697_100079158 3300005536 Bacteria 2705
32 Ga0068857_100026811 3300005577 Bacteria 5081
33 Ga0068856_100000197 3300005614 Bacteria 63857
34 Ga0068863_100018903 3300005841 Bacteria 6593
35 Ga0081455_10008564 3300005937 Bacteria 10616
36 Ga0070717_10000296 3300006028 Bacteria 33438
37 Ga0070717_10003602 3300006028 Bacteria 11108
38 Ga0070717_10020773 3300006028 Bacteria 5169
39 Ga0070717_10064988 3300006028 Bacteria 3032
40 Ga0070715_10008946 3300006163 Bacteria 3512
41 Ga0070716_100002335 3300006173 Bacteria 8727
42 Ga0070716_100006251 3300006173 Bacteria 5812
43 Ga0070716_100032514 3300006173 Bacteria 2845
44 Ga0070712_100021949 3300006175 Bacteria 4198
45 Ga0070712_100077825 3300006175 Bacteria 2392
46 Ga0070712_100080765 3300006175 Bacteria 2354
47 Ga0075434_100122163 3300006871 Bacteria 2620
48 Ga0075436_100012900 3300006914 Bacteria 5730
49 Ga0099794_10015781 3300007265 Bacteria 3340
50 Ga0099794_10026104 3300007265 Bacteria 2697
51 Ga0099795_10001733 3300007788 Bacteria 4869
52 Ga0105240_10009685 3300009093 Bacteria 13614
53 Ga0114129_10223314 3300009147 Bacteria 2540
54 Ga0105242_10008308 3300009176 Bacteria 7975
55 Ga0105238_10000254 3300009551 Bacteria 59748
56 Ga0099796_10000386 3300010159 Bacteria 7219
57 Ga0099796_10005437 3300010159 Bacteria 3180
58 Ga0157370_10027209 3300013104 Bacteria 5639
59 Ga0157370_10087233 3300013104 Bacteria 2931
60 Ga0157369_10002124 3300013105 Bacteria 23888
61 Ga0157369_10003530 3300013105 Bacteria 18591
62 Ga0157369_10004766 3300013105 Bacteria 15947
63 Ga0213872_10008564 3300021361 Bacteria 4946
64 Ga0213876_10000318 3300021384 Bacteria 42308
65 Ga0213876_10000330 3300021384 Bacteria 41354
66 Ga0224572_1000088 3300024225 Bacteria 6656
67 Ga0209760_100213 3300025207 Bacteria 26232
68 Ga0209784_100217 3300025224 Bacteria 39397
69 Ga0207427_100030 3300025231 Bacteria 358045
70 Ga0209437_100012 3300025233 Bacteria 792625
71 Ga0209258_100019 3300025242 Bacteria 566728
72 Ga0209646_1000580 3300025246 Bacteria 15121
73 Ga0209026_1000332 3300025250 Bacteria 46327
74 Ga0209148_1000001 3300025254 Bacteria 2545271
75 Ga0209759_1000023 3300025256 Bacteria 321695
76 Ga0209233_1000002 3300025261 Bacteria 2501366
77 Ga0209233_1000258 3300025261 Bacteria 80118
78 Ga0209233_1005546 3300025261 Bacteria 4177
79 Ga0209455_1000027 3300025272 Bacteria 566710
80 Ga0207692_10010955 3300025898 Bacteria 3839
81 Ga0207692_10026130 3300025898 Bacteria 2737
82 Ga0207699_10002467 3300025906 Bacteria 8727
83 Ga0207699_10047517 3300025906 Bacteria 2517
84 Ga0207684_10054761 3300025910 Bacteria 3384
85 Ga0207684_10083357 3300025910 Bacteria 2723
86 Ga0207693_10000981 3300025915 Bacteria 25583
87 Ga0207693_10012839 3300025915 Bacteria 6757
88 Ga0207693_10092933 3300025915 Bacteria 2364
89 Ga0207693_10095409 3300025915 Bacteria 2332
90 Ga0207693_10104568 3300025915 Bacteria 2220
91 Ga0207662_10024777 3300025918 Bacteria 3453
92 Ga0207646_10038479 3300025922 Bacteria 4308
93 Ga0207700_10001101 3300025928 Bacteria 15581
94 Ga0207700_10015339 3300025928 Bacteria 5050
95 Ga0207664_10007695 3300025929 Bacteria 7478
96 Ga0207665_10030650 3300025939 Bacteria 3556
97 Ga0207665_10041198 3300025939 Bacteria 3083
98 Ga0207678_10005544 3300026067 Bacteria 11277
99 Ga0207702_10000044 3300026078 Bacteria 149419
100 Ga0207641_10017576 3300026088 Bacteria 5855
101 Ga0209179_1000880 3300027512 Bacteria 3354
102 Ga0209588_1011099 3300027671 Bacteria 2717
103 Ga0265334_10017422 3300028573 Bacteria 2968
104 Ga0265336_10000010 3300028666 Bacteria 277947
105 Ga0265324_10004932 3300029957 Bacteria 5868
106 Ga0265325_10000897 3300031241 Bacteria 21542
107 Ga0265340_10003834 3300031247 Bacteria 8476
108 Ga0265316_10064017 3300031344 Bacteria 2849
109 Ga0307508_10000025 3300031616 Bacteria 174642
110 Ga0265314_10003656 3300031711 Bacteria 14771
111 Ga0265314_10009857 3300031711 Bacteria 8017
112 Ga0265314_10014129 3300031711 Bacteria 6409
113 Ga0265342_10043761 3300031712 Bacteria 2701
114 Ga0373954_0000190 3300035118 Bacteria 22280
115 Ga0373954_0004249 3300035118 Bacteria 6155
116 Ga0373933_0000112 3300035724 Bacteria 52335
117 Ga0373947_0028203 3300035725 Bacteria 3289
118 Ga0373937_0043778 3300036401 Bacteria 4088
119 Ga0373925_0009938 3300037068 Bacteria 6910
120 Ga0373925_0071385 3300037068 Bacteria 2626
121 Ga0373925_0072043 3300037068 Bacteria 2614
122 Ga0395898_0002167 3300037466 Bacteria 24071
123 Ga0395898_0069726 3300037466 Bacteria 3401
124 Ga0436364_0519081 3300037853 Bacteria 3496
125 Ga0436364_1271675 3300037853 Bacteria 2739
126 Ga0436365_0029893 3300039437 Bacteria 21458
127 Ga0436365_0228129 3300039437 Bacteria 5756
128 Ga0436365_0449578 3300039437 Bacteria 2358
129 Ga0436365_0496418 3300039437 Bacteria 36061
130 Ga0436365_0701904 3300039437 Bacteria 9585
131 Ga0436365_0875841 3300039437 Bacteria 48187
132 Ga0436365_0884349 3300039437 Bacteria 3460
133 Ga0436365_1294328 3300039437 Bacteria 3153
134 Ga0436365_1905647 3300039437 Bacteria 1940
135 Ga0436360_0602103 3300039438 Bacteria 3103
136 Ga0436360_0650328 3300039438 Bacteria 1895
137 Ga0436360_0869689 3300039438 Bacteria 6474
138 Ga0436361_0004696 3300039447 Bacteria 6739
139 Ga0436361_0559636 3300039447 Bacteria 4976
140 Ga0436361_0666467 3300039447 Bacteria 2499
141 Ga0436363_0678882 3300039450 Bacteria 6421
142 Ga0436363_1006348 3300039450 Bacteria 15622
143 Ga0436362_0528863 3300039453 Bacteria 2061
144 Ga0436362_0645573 3300039453 Bacteria 4913
145 Ga0451577_0000031 3300042876 Bacteria 388524
146 Ga0466966_0045223 3300044684 Bacteria 2816
147 Ga0453684_0001482 3300044712 Bacteria 66202
148 Ga0453684_0045231 3300044712 Bacteria 5876
149 Ga0466957_0019153 3300044842 Bacteria 4025
150 Ga0466959_0026629 3300045049 Bacteria 4286
151 Ga0466959_0038506 3300045049 Bacteria 3534
152 Ga0466967_0080607 3300045976 Bacteria 2938
153 Ga0495651_0060667 3300046462 Bacteria 2896
154 Ga0495580_0017807 3300046472 Bacteria 5300
155 Ga0495639_0003671 3300046475 Bacteria 6613
156 Ga0495664_0068160 3300046477 Bacteria 2123
157 Ga0495652_0078771 3300046529 Bacteria 2727
158 Ga0495645_0006341 3300046543 Bacteria 8207
159 Ga0495667_0074155 3300046559 Bacteria 2216
160 Ga0495588_0049366 3300046674 Bacteria 2164
161 Ga0495646_0059972 3300046680 Bacteria 2271
162 Ga0495613_0108512 3300046689 Bacteria 2002
163 Ga0495604_0003415 3300047317 Bacteria 12661
164 Ga0495674_0013434 3300047319 Bacteria 7699
165 Ga0495674_0131691 3300047319 Bacteria 2107
166 Ga0495680_0036964 3300047322 Bacteria 3914
167 Ga0495684_0064429 3300047471 Bacteria 2785
168 Ga0495593_0027020 3300047673 Bacteria 3163
169 Ga0495602_0098833 3300048088 Bacteria 2401
170 Ga0496104_0051890 3300048907 Bacteria 3872
171 Ga0496104_0094678 3300048907 Bacteria 2857
172 Ga0496105_0024007 3300048908 Bacteria 4952
173 Ga0496109_0006532 3300048912 Bacteria 9817
174 Ga0496111_0055313 3300048914 Bacteria 2870
175 Ga0496112_0057675 3300048915 Bacteria 3823
176 Ga0496114_0105556 3300048917 Bacteria 2410
177 Ga0496125_0060144 3300048928 Bacteria 3056
178 Ga0496126_0100084 3300048929 Bacteria 2538
179 Ga0501070_0006237 3300049586 Bacteria 10149
180 Ga0501080_0032567 3300049742 Bacteria 4862
181 Ga0501044_0180680 3300049823 Bacteria 2077
182 nmdc:mga06r32_12933_c1 3300050510 Bacteria 7545
183 nmdc:mga08x19_13013_c1 3300050514 Bacteria 5023
184 Ga0495601_0009036 3300053077 Bacteria 5884
185 Ga0495619_0009108 3300053085 Bacteria 6267
186 Ga0495619_0029252 3300053085 Bacteria 3559
187 Ga0500566_0000077 3300053094 Bacteria 48099
188 Ga0500614_001050 3300053123 Bacteria 6876
189 Ga0500559_0000246 3300053136 Bacteria 42730
190 Ga0500603_000053 3300053150 Bacteria 28532
191 Ga0500630_000158 3300053159 Bacteria 24806
192 Ga0500638_010311 3300053162 Bacteria 4086
193 Ga0500639_000171 3300053163 Bacteria 31550
194 Ga0500596_000216 3300053735 Bacteria 9735
195 Ga0500596_000526 3300053735 Bacteria 7227

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048917 Ga0496114_0105556 Ga0496114_0105556_745_2394 549
2 3300044712 Ga0453684_0045231 Ga0453684_0045231_2588_4438 557
3 3300035118 Ga0373954_0000190 Ga0373954_0000190_2228_4051 571
4 3300036401 Ga0373937_0043778 Ga0373937_0043778_2020_3843 571
5 3300042876 Ga0451577_0000031 Ga0451577_0000031_52427_54196 571
6 3300044712 Ga0453684_0001482 Ga0453684_0001482_57483_59252 571
7 3300006175 Ga0070712_100080765 Ga0070712_1000807652 574
8 3300025915 Ga0207693_10095409 Ga0207693_100954092 574
9 3300005471 Ga0070698_100189031 Ga0070698_1001890311 585
10 3300005518 Ga0070699_100079947 Ga0070699_1000799472 593
11 3300006871 Ga0075434_100122163 Ga0075434_1001221632 595
12 3300050510 nmdc:mga06r32_12933_c1 nmdc:mga06r32_12933_c1_4032_5912 598
13 3300005444 Ga0070694_100026203 Ga0070694_1000262032 602
14 3300025939 Ga0207665_10030650 Ga0207665_100306502 602
15 3300005466 Ga0070685_10004475 Ga0070685_100044752 603
16 3300039447 Ga0436361_0666467 Ga0436361_0666467_396_2219 605
17 3300049823 Ga0501044_0180680 Ga0501044_0180680_23_1843 605
18 iso_pu_bacteria 2513237141 2513888299 605
19 3300039453 Ga0436362_0528863 Ga0436362_0528863_18_1883 606
20 3300025261 Ga0209233_1005546 Ga0209233_10055463 608
21 3300039437 Ga0436365_1905647 Ga0436365_1905647_84_1913 608
22 3300048929 Ga0496126_0100084 Ga0496126_0100084_612_2441 608
23 3300021384 Ga0213876_10000318 Ga0213876_1000031823 609
24 3300039437 Ga0436365_0029893 Ga0436365_0029893_6275_8188 609
25 3300002738 JGI25154J39366_1005270 JGI25154J39366_10052702 611
26 3300006175 Ga0070712_100077825 Ga0070712_1000778252 611
27 3300025915 Ga0207693_10092933 Ga0207693_100929331 611
28 3300028573 Ga0265334_10017422 Ga0265334_100174222 611
29 3300044684 Ga0466966_0045223 Ga0466966_0045223_397_2235 611
30 3300045049 Ga0466959_0026629 Ga0466959_0026629_2334_4172 611
31 3300039437 Ga0436365_0875841 Ga0436365_0875841_43991_45925 613
32 3300009176 Ga0105242_10008308 Ga0105242_100083082 614
33 3300024225 Ga0224572_1000088 Ga0224572_10000883 614
34 3300005436 Ga0070713_100020896 Ga0070713_1000208965 615
35 3300025928 Ga0207700_10015339 Ga0207700_100153391 615
36 3300026067 Ga0207678_10005544 Ga0207678_100055443 615
37 3300048088 Ga0495602_0098833 Ga0495602_0098833_92_1978 615
38 3300053085 Ga0495619_0009108 Ga0495619_0009108_1409_3295 615
39 3300005518 Ga0070699_100051352 Ga0070699_1000513524 616
40 3300005536 Ga0070697_100062797 Ga0070697_1000627972 616
41 3300037853 Ga0436364_0519081 Ga0436364_0519081_1554_3437 617
42 3300047322 Ga0495680_0036964 Ga0495680_0036964_939_2795 617
43 3300053085 Ga0495619_0029252 Ga0495619_0029252_677_2533 617
44 3300005536 Ga0070697_100079158 Ga0070697_1000791581 618
45 3300025939 Ga0207665_10041198 Ga0207665_100411982 618
46 3300005467 Ga0070706_100075795 Ga0070706_1000757951 619
47 3300005468 Ga0070707_100020963 Ga0070707_1000209637 619
48 3300005471 Ga0070698_100084794 Ga0070698_1000847942 619
49 3300005937 Ga0081455_10008564 Ga0081455_100085645 619
50 3300006173 Ga0070716_100006251 Ga0070716_1000062514 619
51 3300006028 Ga0070717_10020773 Ga0070717_100207732 620
52 3300039438 Ga0436360_0650328 Ga0436360_0650328_12_1880 620
53 3300003214 JGI25165J46597_1000219 JGI25165J46597_100021982 621
54 3300005467 Ga0070706_100037195 Ga0070706_1000371951 621
55 3300025261 Ga0209233_1000258 Ga0209233_100025883 621
56 3300025910 Ga0207684_10083357 Ga0207684_100833571 621
57 3300048907 Ga0496104_0094678 Ga0496104_0094678_960_2843 621
58 3300048908 Ga0496105_0024007 Ga0496105_0024007_3047_4930 621
59 3300006028 Ga0070717_10064988 Ga0070717_100649883 622
60 3300006914 Ga0075436_100012900 Ga0075436_1000129004 622
61 3300009551 Ga0105238_10000254 Ga0105238_100002547 622
62 3300025918 Ga0207662_10024777 Ga0207662_100247772 622
63 3300031711 Ga0265314_10009857 Ga0265314_100098576 622
64 3300031712 Ga0265342_10043761 Ga0265342_100437611 622
65 3300035725 Ga0373947_0028203 Ga0373947_0028203_1326_3230 622
66 3300037068 Ga0373925_0071385 Ga0373925_0071385_709_2595 622
67 3300037068 Ga0373925_0072043 Ga0373925_0072043_127_2031 622
68 3300039437 Ga0436365_0228129 Ga0436365_0228129_639_2552 622
69 3300039438 Ga0436360_0869689 Ga0436360_0869689_329_2230 622
70 3300039447 Ga0436361_0004696 Ga0436361_0004696_1980_3881 622
71 3300045049 Ga0466959_0038506 Ga0466959_0038506_14_1915 622
72 3300046462 Ga0495651_0060667 Ga0495651_0060667_898_2784 622
73 3300046477 Ga0495664_0068160 Ga0495664_0068160_122_2008 622
74 3300047319 Ga0495674_0131691 Ga0495674_0131691_192_2078 622
75 3300048907 Ga0496104_0051890 Ga0496104_0051890_274_2142 622
76 3300050514 nmdc:mga08x19_13013_c1 nmdc:mga08x19_13013_c1_1108_2991 622
77 3300025898 Ga0207692_10026130 Ga0207692_100261302 623
78 3300025915 Ga0207693_10000981 Ga0207693_1000098122 623
79 3300028666 Ga0265336_10000010 Ga0265336_10000010139 623
80 3300029957 Ga0265324_10004932 Ga0265324_100049321 623
81 3300039437 Ga0436365_0884349 Ga0436365_0884349_1031_2905 623
82 3300045976 Ga0466967_0080607 Ga0466967_0080607_905_2860 623
83 3300009093 Ga0105240_10009685 Ga0105240_100096858 624
84 3300009147 Ga0114129_10223314 Ga0114129_102233142 624
85 3300013104 Ga0157370_10027209 Ga0157370_100272093 624
86 3300013104 Ga0157370_10087233 Ga0157370_100872333 624
87 3300013105 Ga0157369_10002124 Ga0157369_100021246 624
88 3300013105 Ga0157369_10003530 Ga0157369_1000353011 624
89 3300031241 Ga0265325_10000897 Ga0265325_1000089714 624
90 3300037466 Ga0395898_0002167 Ga0395898_0002167_15921_17858 624
91 3300039437 Ga0436365_1294328 Ga0436365_1294328_326_2263 624
92 3300046559 Ga0495667_0074155 Ga0495667_0074155_261_2156 624
93 3300002737 JGI25162J39368_1000348 JGI25162J39368_100034811 625
94 3300002741 JGI25157J39369_1000254 JGI25157J39369_100025411 625
95 3300002771 JGI25163J39215_1000463 JGI25163J39215_10004634 625
96 3300002772 JGI25164J39214_1000262 JGI25164J39214_100026211 625
97 3300003214 JGI25165J46597_1000472 JGI25165J46597_100047211 625
98 3300003761 Ga0055535_1000423 Ga0055535_100042311 625
99 3300003762 Ga0055542_1000443 Ga0055542_100044311 625
100 3300003763 Ga0055529_1000458 Ga0055529_100045811 625
101 3300005329 Ga0070683_100002390 Ga0070683_1000023905 625
102 3300005434 Ga0070709_10002478 Ga0070709_100024788 625
103 3300005434 Ga0070709_10006358 Ga0070709_100063583 625
104 3300005435 Ga0070714_100031677 Ga0070714_1000316772 625
105 3300005436 Ga0070713_100001366 Ga0070713_1000013664 625
106 3300005436 Ga0070713_100016738 Ga0070713_1000167383 625
107 3300005437 Ga0070710_10003427 Ga0070710_100034274 625
108 3300005439 Ga0070711_100050287 Ga0070711_1000502872 625
109 3300005467 Ga0070706_100067550 Ga0070706_1000675503 625
110 3300005577 Ga0068857_100026811 Ga0068857_1000268114 625
111 3300005614 Ga0068856_100000197 Ga0068856_10000019738 625
112 3300005841 Ga0068863_100018903 Ga0068863_1000189034 625
113 3300006028 Ga0070717_10000296 Ga0070717_1000029635 625
114 3300006028 Ga0070717_10003602 Ga0070717_100036029 625
115 3300006163 Ga0070715_10008946 Ga0070715_100089463 625
116 3300006173 Ga0070716_100002335 Ga0070716_1000023356 625
117 3300006173 Ga0070716_100032514 Ga0070716_1000325143 625
118 3300006175 Ga0070712_100021949 Ga0070712_1000219493 625
119 3300007265 Ga0099794_10015781 Ga0099794_100157812 625
120 3300007265 Ga0099794_10026104 Ga0099794_100261042 625
121 3300007788 Ga0099795_10001733 Ga0099795_100017332 625
122 3300010159 Ga0099796_10000386 Ga0099796_100003868 625
123 3300010159 Ga0099796_10005437 Ga0099796_100054371 625
124 3300013105 Ga0157369_10004766 Ga0157369_1000476613 625
125 3300021361 Ga0213872_10008564 Ga0213872_100085642 625
126 3300021384 Ga0213876_10000330 Ga0213876_100003308 625
127 3300025207 Ga0209760_100213 Ga0209760_1002132 625
128 3300025224 Ga0209784_100217 Ga0209784_10021731 625
129 3300025231 Ga0207427_100030 Ga0207427_100030309 625
130 3300025233 Ga0209437_100012 Ga0209437_100012759 625
131 3300025242 Ga0209258_100019 Ga0209258_10001930 625
132 3300025246 Ga0209646_1000580 Ga0209646_10005806 625
133 3300025250 Ga0209026_1000332 Ga0209026_100033230 625
134 3300025254 Ga0209148_1000001 Ga0209148_10000012270 625
135 3300025256 Ga0209759_1000023 Ga0209759_1000023204 625
136 3300025261 Ga0209233_1000002 Ga0209233_100000230 625
137 3300025272 Ga0209455_1000027 Ga0209455_1000027516 625
138 3300025898 Ga0207692_10010955 Ga0207692_100109551 625
139 3300025906 Ga0207699_10002467 Ga0207699_100024671 625
140 3300025906 Ga0207699_10047517 Ga0207699_100475171 625
141 3300025910 Ga0207684_10054761 Ga0207684_100547612 625
142 3300025915 Ga0207693_10012839 Ga0207693_100128394 625
143 3300025915 Ga0207693_10104568 Ga0207693_101045681 625
144 3300025922 Ga0207646_10038479 Ga0207646_100384792 625
145 3300025928 Ga0207700_10001101 Ga0207700_1000110117 625
146 3300025929 Ga0207664_10007695 Ga0207664_100076952 625
147 3300026078 Ga0207702_10000044 Ga0207702_10000044128 625
148 3300026088 Ga0207641_10017576 Ga0207641_100175762 625
149 3300027512 Ga0209179_1000880 Ga0209179_10008802 625
150 3300027671 Ga0209588_1011099 Ga0209588_10110991 625
151 3300031247 Ga0265340_10003834 Ga0265340_100038343 625
152 3300031344 Ga0265316_10064017 Ga0265316_100640171 625
153 3300031616 Ga0307508_10000025 Ga0307508_1000002558 625
154 3300031711 Ga0265314_10003656 Ga0265314_100036562 625
155 3300031711 Ga0265314_10014129 Ga0265314_100141294 625
156 3300035118 Ga0373954_0004249 Ga0373954_0004249_275_2224 625
157 3300035724 Ga0373933_0000112 Ga0373933_0000112_12399_14318 625
158 3300037068 Ga0373925_0009938 Ga0373925_0009938_1389_3338 625
159 3300037466 Ga0395898_0069726 Ga0395898_0069726_870_2777 625
160 3300037853 Ga0436364_1271675 Ga0436364_1271675_735_2675 625
161 3300039437 Ga0436365_0449578 Ga0436365_0449578_278_2164 625
162 3300039437 Ga0436365_0496418 Ga0436365_0496418_18571_20472 625
163 3300039437 Ga0436365_0701904 Ga0436365_0701904_4626_6524 625
164 3300039438 Ga0436360_0602103 Ga0436360_0602103_902_2806 625
165 3300039447 Ga0436361_0559636 Ga0436361_0559636_456_2342 625
166 3300039450 Ga0436363_0678882 Ga0436363_0678882_2802_4706 625
167 3300039450 Ga0436363_1006348 Ga0436363_1006348_472_2373 625
168 3300039453 Ga0436362_0645573 Ga0436362_0645573_27_1925 625
169 3300044842 Ga0466957_0019153 Ga0466957_0019153_1543_3525 625
170 3300046472 Ga0495580_0017807 Ga0495580_0017807_980_2929 625
171 3300046475 Ga0495639_0003671 Ga0495639_0003671_1802_3751 625
172 3300046529 Ga0495652_0078771 Ga0495652_0078771_469_2367 625
173 3300046543 Ga0495645_0006341 Ga0495645_0006341_3533_5482 625
174 3300046674 Ga0495588_0049366 Ga0495588_0049366_49_1998 625
175 3300046680 Ga0495646_0059972 Ga0495646_0059972_70_2019 625
176 3300046689 Ga0495613_0108512 Ga0495613_0108512_26_1966 625
177 3300047317 Ga0495604_0003415 Ga0495604_0003415_3387_5267 625
178 3300047319 Ga0495674_0013434 Ga0495674_0013434_4163_6112 625
179 3300047471 Ga0495684_0064429 Ga0495684_0064429_205_2154 625
180 3300047673 Ga0495593_0027020 Ga0495593_0027020_254_2203 625
181 3300048912 Ga0496109_0006532 Ga0496109_0006532_2338_4233 625
182 3300048914 Ga0496111_0055313 Ga0496111_0055313_920_2815 625
183 3300048915 Ga0496112_0057675 Ga0496112_0057675_44_1939 625
184 3300048928 Ga0496125_0060144 Ga0496125_0060144_981_2948 625
185 3300049586 Ga0501070_0006237 Ga0501070_0006237_734_2680 625
186 3300049742 Ga0501080_0032567 Ga0501080_0032567_2549_4495 625
187 3300053077 Ga0495601_0009036 Ga0495601_0009036_65_2014 625
188 3300053094 Ga0500566_0000077 Ga0500566_0000077_42651_44603 625
189 3300053123 Ga0500614_001050 Ga0500614_001050_1319_3271 625
190 3300053136 Ga0500559_0000246 Ga0500559_0000246_15555_17540 625
191 3300053150 Ga0500603_000053 Ga0500603_000053_24758_26710 625
192 3300053159 Ga0500630_000158 Ga0500630_000158_5184_7136 625
193 3300053162 Ga0500638_010311 Ga0500638_010311_1880_3880 625
194 3300053163 Ga0500639_000171 Ga0500639_000171_25975_27927 625
195 3300053735 Ga0500596_000216 Ga0500596_000216_5715_7667 625
196 3300053735 Ga0500596_000526 Ga0500596_000526_4370_6355 625
197 iso_pu_bacteria 2508501128 2509152117 625

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22776

K_trans_C

K+ potassium transporter C-terminal domain

528

677

0.99

PF02705

K_trans

K+ potassium transporter integral membrane domain

69

518

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gi9-assembly1.cif.gz_C crystal structure of apct transporter bound to 7f11 monoclonal fab fragment 0.7288 15 446
3gi9-assembly1.cif.gz_C crystal structure of apct transporter bound to 7f11 monoclonal fab fragment 0.6928 15 446
3gi8-assembly1.cif.gz_C crystal structure of apct k158a transporter bound to 7f11 monoclonal fab fragment 0.6818 15 444
3gia-assembly1.cif.gz_A crystal structure of apct transporter 0.669 15 444
3gi8-assembly1.cif.gz_C crystal structure of apct k158a transporter bound to 7f11 monoclonal fab fragment 0.6502 15 444
ID Description Score Start End Superfamily
af_Q54JK9_60_587_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.957 20 546 1.20.1740.10
af_Q652J4_30_507_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9536 19 448 1.20.1740.10
af_Q5JK32_78_523_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9535 33 434 1.20.1740.10
af_Q54JK9_60_587_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9534 20 546 1.20.1740.10
af_A0A1D6PZ98_23_593_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9519 20 546 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A6D0F7Y8-F1-model_v4 deleted 0.9773 122 352
AF-A0A7W1Z0D3-F1-model_v4 Probable potassium transport system protein Kup 0.9749 15 625 GO:0005886
GO:0015079
GO:0015293
AF-A0A023D0T2-F1-model_v4 Probable potassium transport system protein Kup 0.9733 5 625 GO:0005886
GO:0015079
GO:0015293
AF-W4TVR5-F1-model_v4 deleted 0.9706 111 351
AF-A0A345DBM2-F1-model_v4 Probable potassium transport system protein Kup 0.9702 13 625 GO:0005886
GO:0015079
GO:0015293

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pLDDT pTM Quality
87.13 0.85 High
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Predicted Structure (AlphaFold2)

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