F302176

General Info

Members Datasets Scaffolds Average Seq Length
196 149 392 253

Family's Representative Sequence

Representative Sequence 3300049593|Ga0501077_0120896|Ga0501077_0120896_241_1038
Length 265
Sequence METHMSGILISRDGPVTIVAINRPDRRNAVDAATARELFDAFSAFDADGEASVAILTGAAGAFCAGADLKALAGGESGKRAETGGVNSFAPMGPSRLRLSKPVIAAIEGHAVAGGAELALWCDLRVMAETAIFGIYCRRFGVPLIDLGTIRLPRLIGHSRAMDLMLTGRSVDAAEAHAIGLANRVAPHGKALDQAIALAKEIAAFPQTCLRNDRLSALEQWDLDESAAIDNEIKRGLDTLRSGETAAGARRFTSGAGRHGRFDQT

Samples

Sample ID Description Type Environment
1 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
49 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
68 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
69 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
75 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
76 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
77 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
78 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
79 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
80 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
87 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
88 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
89 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
90 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
91 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
92 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
97 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
98 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
99 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
100 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
101 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
104 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
105 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
108 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
109 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
110 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
120 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
121 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
122 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
123 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
124 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
128 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
129 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
130 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
131 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
132 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
133 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
134 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
138 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
139 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
140 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
143 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
144 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
145 2791355199
146 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
147 2922425934
148 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
149 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.42
Metatranscriptomes 0
Isolates 2.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.06
Nodule 4.08
Rhizoplane 1.53
Rhizosphere 87.24
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501077_0120896 3300049593 Bacteria 1660
2 Ga0070676_10245298 3300005328 Bacteria 1193
3 Ga0070690_100057359 3300005330 Bacteria 2499
4 Ga0070670_100009806 3300005331 Bacteria 8181
5 Ga0070661_100036152 3300005344 Bacteria 3590
6 Ga0070692_10077250 3300005345 Bacteria 1786
7 Ga0070671_100014241 3300005355 Bacteria 6422
8 Ga0070674_100229758 3300005356 Bacteria 1447
9 Ga0070714_100078405 3300005435 Bacteria 2871
10 Ga0070713_100048877 3300005436 Bacteria 3486
11 Ga0070713_100365774 3300005436 Bacteria 1341
12 Ga0070705_100086829 3300005440 Bacteria 1938
13 Ga0070694_100140671 3300005444 Bacteria 1753
14 Ga0070708_100012310 3300005445 Bacteria 6976
15 Ga0070708_100032136 3300005445 Bacteria 4549
16 Ga0070706_100014523 3300005467 Bacteria 7275
17 Ga0070706_100206884 3300005467 Bacteria 1832
18 Ga0070706_100612576 3300005467 Bacteria 1011
19 Ga0070707_100091944 3300005468 Bacteria 2937
20 Ga0070698_100039286 3300005471 Bacteria 4872
21 Ga0070698_100057223 3300005471 Bacteria 3946
22 Ga0070698_100143017 3300005471 Bacteria 2342
23 Ga0070699_100026738 3300005518 Bacteria 4977
24 Ga0070672_100333419 3300005543 Bacteria 1291
25 Ga0070686_100650380 3300005544 Bacteria 836
26 Ga0070695_100449685 3300005545 Bacteria 987
27 Ga0070665_100321024 3300005548 Bacteria 1553
28 Ga0070704_100350469 3300005549 Bacteria 1246
29 Ga0068855_100099671 3300005563 Bacteria 3346
30 Ga0068859_100039109 3300005617 Bacteria 4758
31 Ga0068859_100141834 3300005617 Bacteria 2476
32 Ga0068864_100181439 3300005618 Bacteria 1925
33 Ga0068860_100135818 3300005843 Bacteria 2361
34 Ga0068862_100008181 3300005844 Bacteria 8646
35 Ga0068862_100227313 3300005844 Bacteria 1691
36 Ga0068862_100592306 3300005844 Bacteria 1063
37 Ga0081455_10001698 3300005937 Bacteria 26658
38 Ga0070717_10568874 3300006028 Bacteria 1027
39 Ga0075364_10032087 3300006051 Bacteria 3374
40 Ga0075428_100034406 3300006844 Bacteria 5588
41 Ga0075428_100152241 3300006844 Bacteria 2512
42 Ga0075428_100605004 3300006844 Bacteria 1171
43 Ga0075431_100000328 3300006847 Bacteria 37639
44 Ga0075434_100050106 3300006871 Bacteria 4148
45 Ga0075429_100027884 3300006880 Bacteria 4902
46 Ga0097620_100039109 3300006931 Bacteria 4758
47 Ga0097620_100141833 3300006931 Bacteria 2476
48 Ga0099822_1002166 3300006943 Bacteria 24178
49 Ga0105240_10195614 3300009093 Bacteria 2374
50 Ga0111539_10001858 3300009094 Bacteria 28049
51 Ga0111539_10013595 3300009094 Bacteria 10174
52 Ga0111539_10110931 3300009094 Bacteria 3219
53 Ga0105247_10060074 3300009101 Bacteria 2355
54 Ga0114129_10014295 3300009147 Bacteria 11311
55 Ga0114129_10486947 3300009147 Bacteria 1613
56 Ga0105243_10188576 3300009148 Bacteria 1799
57 Ga0105248_10002826 3300009177 Bacteria 19269
58 Ga0105248_10157927 3300009177 Bacteria 2559
59 Ga0105237_10268467 3300009545 Bacteria 1709
60 Ga0105238_10003277 3300009551 Bacteria 16157
61 Ga0105238_10157744 3300009551 Bacteria 2244
62 Ga0105238_10265608 3300009551 Bacteria 1696
63 Ga0105249_10120694 3300009553 Bacteria 2490
64 Ga0105239_10074561 3300010375 Bacteria 3730
65 Ga0163162_10040403 3300013306 Bacteria 4664
66 Ga0213876_10121936 3300021384 Bacteria 1384
67 Ga0207653_10045764 3300025885 Bacteria 1446
68 Ga0207684_10045167 3300025910 Bacteria 3737
69 Ga0207684_10170624 3300025910 Bacteria 1875
70 Ga0207654_10065181 3300025911 Bacteria 2144
71 Ga0207695_10359843 3300025913 Bacteria 1342
72 Ga0207693_10142302 3300025915 Bacteria 1886
73 Ga0207649_10007223 3300025920 Bacteria 6038
74 Ga0207646_10118078 3300025922 Bacteria 2382
75 Ga0207694_10000575 3300025924 Bacteria 33359
76 Ga0207694_10097833 3300025924 Bacteria 2322
77 Ga0207694_10147264 3300025924 Bacteria 1896
78 Ga0207644_10022442 3300025931 Bacteria 4313
79 Ga0207670_10115250 3300025936 Bacteria 1944
80 Ga0207669_10168312 3300025937 Bacteria 1557
81 Ga0207711_10020368 3300025941 Bacteria 5528
82 Ga0207711_10074572 3300025941 Bacteria 2951
83 Ga0207711_10188064 3300025941 Bacteria 1881
84 Ga0207712_10077165 3300025961 Bacteria 2413
85 Ga0207703_10470549 3300026035 Bacteria 1176
86 Ga0207708_10052715 3300026075 Bacteria 3099
87 Ga0207641_10561488 3300026088 Bacteria 1114
88 Ga0207676_10117491 3300026095 Bacteria 2237
89 Ga0207674_10438060 3300026116 Bacteria 1263
90 Ga0209589_1000006 3300027357 Bacteria 436292
91 Ga0209489_100007 3300027361 Bacteria 436292
92 Ga0209700_100008 3300027363 Bacteria 436292
93 Ga0207428_10042274 3300027907 Bacteria 3685
94 Ga0268265_10271357 3300028380 Bacteria 1513
95 Ga0268264_10087110 3300028381 Bacteria 2685
96 Ga0268264_10341823 3300028381 Bacteria 1422
97 Ga0307408_100019751 3300031548 Bacteria 4539
98 Ga0307405_10021513 3300031731 Bacteria 3628
99 Ga0307415_100353479 3300032126 Bacteria 1238
100 Ga0373926_0001607 3300035083 Bacteria 6956
101 Ga0373926_0030199 3300035083 Bacteria 1908
102 Ga0373926_0032217 3300035083 Bacteria 1849
103 Ga0373943_0003767 3300035170 Bacteria 6888
104 Ga0373946_0068569 3300035171 Bacteria 1526
105 Ga0373927_0000400 3300035695 Bacteria 33593
106 Ga0373927_0002459 3300035695 Bacteria 13514
107 Ga0373947_0041678 3300035725 Bacteria 2738
108 Ga0373947_0107294 3300035725 Bacteria 1761
109 Ga0373925_0032664 3300037068 Bacteria 3831
110 Ga0373925_0096946 3300037068 Bacteria 2261
111 Ga0395898_0050909 3300037466 Bacteria 4052
112 Ga0436364_0608426 3300037853 Bacteria 2720
113 Ga0395901_0062737 3300038443 Bacteria 3867
114 Ga0436365_0268309 3300039437 Bacteria 5151
115 Ga0436365_1669714 3300039437 Bacteria 2950
116 Ga0436361_0585113 3300039447 Bacteria 1244
117 Ga0466969_0035643 3300044656 Bacteria 2516
118 Ga0466972_0004326 3300044658 Bacteria 7096
119 Ga0466966_0061323 3300044684 Bacteria 2372
120 Ga0466968_0029789 3300044735 Bacteria 2258
121 Ga0466957_0015172 3300044842 Bacteria 4498
122 Ga0466960_0000618 3300044901 Bacteria 12269
123 Ga0466960_0166019 3300044901 Bacteria 1189
124 Ga0466959_0043314 3300045049 Bacteria 3317
125 Ga0466958_0016912 3300045836 Bacteria 4208
126 Ga0466967_0010875 3300045976 Bacteria 6855
127 Ga0466967_0048943 3300045976 Bacteria 3694
128 Ga0495603_0035976 3300046455 Bacteria 2972
129 Ga0495629_0008939 3300046459 Bacteria 7359
130 Ga0495638_0012081 3300046460 Bacteria 5933
131 Ga0495583_0095625 3300046506 Bacteria 1274
132 Ga0495668_0101950 3300046616 Bacteria 1570
133 Ga0495647_0061997 3300046681 Bacteria 1478
134 Ga0495658_0007716 3300046683 Bacteria 5332
135 Ga0495624_0179188 3300046690 Bacteria 1292
136 Ga0495672_0017110 3300047320 Bacteria 4856
137 Ga0495593_0008839 3300047673 Bacteria 5847
138 Ga0496105_0155429 3300048908 Bacteria 1878
139 Ga0496113_0030218 3300048916 Bacteria 3920
140 Ga0496122_0050429 3300048925 Bacteria 3174
141 Ga0496126_0031287 3300048929 Bacteria 5030
142 Ga0501031_0050865 3300049568 Bacteria 2699
143 Ga0501034_0003095 3300049571 Bacteria 19175
144 Ga0501036_0174930 3300049572 Bacteria 1808
145 Ga0501037_0080146 3300049573 Bacteria 2369
146 Ga0501039_0236037 3300049575 Bacteria 1438
147 Ga0501040_0295554 3300049576 Bacteria 1158
148 Ga0501041_0068338 3300049577 Bacteria 2178
149 Ga0501041_0198331 3300049577 Bacteria 1258
150 Ga0501042_0374561 3300049578 Bacteria 1030
151 Ga0501048_0113015 3300049582 Bacteria 1918
152 Ga0501068_0000691 3300049584 Bacteria 17269
153 Ga0501070_0211093 3300049586 Bacteria 1593
154 Ga0501072_0116513 3300049588 Bacteria 2128
155 Ga0501072_0561801 3300049588 Bacteria 901
156 Ga0501073_0001815 3300049589 Bacteria 15883
157 Ga0501074_0000103 3300049590 Bacteria 41408
158 Ga0501074_0163235 3300049590 Bacteria 1591
159 Ga0501075_0197091 3300049591 Bacteria 1536
160 Ga0501079_0483923 3300049741 Bacteria 973
161 Ga0501080_0003114 3300049742 Bacteria 14636
162 Ga0501083_0227588 3300049744 Bacteria 1215
163 Ga0501045_0007522 3300049824 Bacteria 7570
164 Ga0501045_0010435 3300049824 Bacteria 6504
165 nmdc:mga00v17_25003_c1 3300050491 Bacteria 3467
166 nmdc:mga07m45_382427_c1 3300050496 Bacteria 817
167 nmdc:mga05p37_213608_c1 3300050507 Bacteria 2331
168 nmdc:mga05p37_23041_c1 3300050507 Bacteria 7554
169 nmdc:mga05p37_439843_c1 3300050507 Bacteria 1512
170 nmdc:mga09592_117528_c1 3300050508 Bacteria 2282
171 nmdc:mga09592_23930_c1 3300050508 Bacteria 5048
172 nmdc:mga09592_261635_c1 3300050508 Bacteria 1500
173 nmdc:mga0qj67_144295_c1 3300050509 Bacteria 1930
174 nmdc:mga0qj67_50141_c1 3300050509 Bacteria 3300
175 nmdc:mga06r32_27038_c1 3300050510 Bacteria 5356
176 nmdc:mga06r32_44228_c1 3300050510 Bacteria 4240
177 nmdc:mga08y16_209169_c1 3300050511 Bacteria 2021
178 nmdc:mga08y16_238695_c1 3300050511 Bacteria 1879
179 nmdc:mga08y16_408157_c1 3300050511 Bacteria 1389
180 nmdc:mga0n895_338003_c1 3300050512 Bacteria 1525
181 nmdc:mga0n895_48695_c1 3300050512 Bacteria 4150
182 nmdc:mga0a205_54854_c1 3300050515 Bacteria 3848
183 Ga0500595_018696 3300053119 Bacteria 2530
184 Ga0500568_0004530 3300053139 Bacteria 7407
185 Ga0500637_0005516 3300053178 Bacteria 6134
186 Ga0501084_0054847 3300054114 Bacteria 3334
187 Ga0501084_0529594 3300054114 Bacteria 996
188 Ga0530510_0302183 3300061734 Bacteria 1197
189 Ga0530510_0652946 3300061734 Bacteria 801
190 2671120135 2667528175 Bacteria 7532676
191 2793066303 2791355197 Bacteria 8420563
192 2793078651
193 2908741212 2908739725 Bacteria 8628932
194 2922431878
195 3005481824 3005474847 Bacteria 9259049
196 8056690444 8056689827 Bacteria 6712655
197 Ga0501077_0120896
198 Ga0070676_10245298
199 Ga0070690_100057359
200 Ga0070670_100009806
201 Ga0070661_100036152
202 Ga0070692_10077250
203 Ga0070671_100014241
204 Ga0070674_100229758
205 Ga0070714_100078405
206 Ga0070713_100048877
207 Ga0070713_100365774
208 Ga0070705_100086829
209 Ga0070694_100140671
210 Ga0070708_100012310
211 Ga0070708_100032136
212 Ga0070706_100014523
213 Ga0070706_100206884
214 Ga0070706_100612576
215 Ga0070707_100091944
216 Ga0070698_100039286
217 Ga0070698_100057223
218 Ga0070698_100143017
219 Ga0070699_100026738
220 Ga0070672_100333419
221 Ga0070686_100650380
222 Ga0070695_100449685
223 Ga0070665_100321024
224 Ga0070704_100350469
225 Ga0068855_100099671
226 Ga0068859_100039109
227 Ga0068859_100141834
228 Ga0068864_100181439
229 Ga0068860_100135818
230 Ga0068862_100008181
231 Ga0068862_100227313
232 Ga0068862_100592306
233 Ga0081455_10001698
234 Ga0070717_10568874
235 Ga0075364_10032087
236 Ga0075428_100034406
237 Ga0075428_100152241
238 Ga0075428_100605004
239 Ga0075431_100000328
240 Ga0075434_100050106
241 Ga0075429_100027884
242 Ga0097620_100039109
243 Ga0097620_100141833
244 Ga0099822_1002166
245 Ga0105240_10195614
246 Ga0111539_10001858
247 Ga0111539_10013595
248 Ga0111539_10110931
249 Ga0105247_10060074
250 Ga0114129_10014295
251 Ga0114129_10486947
252 Ga0105243_10188576
253 Ga0105248_10002826
254 Ga0105248_10157927
255 Ga0105237_10268467
256 Ga0105238_10003277
257 Ga0105238_10157744
258 Ga0105238_10265608
259 Ga0105249_10120694
260 Ga0105239_10074561
261 Ga0163162_10040403
262 Ga0213876_10121936
263 Ga0207653_10045764
264 Ga0207684_10045167
265 Ga0207684_10170624
266 Ga0207654_10065181
267 Ga0207695_10359843
268 Ga0207693_10142302
269 Ga0207649_10007223
270 Ga0207646_10118078
271 Ga0207694_10000575
272 Ga0207694_10097833
273 Ga0207694_10147264
274 Ga0207644_10022442
275 Ga0207670_10115250
276 Ga0207669_10168312
277 Ga0207711_10020368
278 Ga0207711_10074572
279 Ga0207711_10188064
280 Ga0207712_10077165
281 Ga0207703_10470549
282 Ga0207708_10052715
283 Ga0207641_10561488
284 Ga0207676_10117491
285 Ga0207674_10438060
286 Ga0209589_1000006
287 Ga0209489_100007
288 Ga0209700_100008
289 Ga0207428_10042274
290 Ga0268265_10271357
291 Ga0268264_10087110
292 Ga0268264_10341823
293 Ga0307408_100019751
294 Ga0307405_10021513
295 Ga0307415_100353479
296 Ga0373926_0001607
297 Ga0373926_0030199
298 Ga0373926_0032217
299 Ga0373943_0003767
300 Ga0373946_0068569
301 Ga0373927_0000400
302 Ga0373927_0002459
303 Ga0373947_0041678
304 Ga0373947_0107294
305 Ga0373925_0032664
306 Ga0373925_0096946
307 Ga0395898_0050909
308 Ga0436364_0608426
309 Ga0395901_0062737
310 Ga0436365_0268309
311 Ga0436365_1669714
312 Ga0436361_0585113
313 Ga0466969_0035643
314 Ga0466972_0004326
315 Ga0466966_0061323
316 Ga0466968_0029789
317 Ga0466957_0015172
318 Ga0466960_0000618
319 Ga0466960_0166019
320 Ga0466959_0043314
321 Ga0466958_0016912
322 Ga0466967_0010875
323 Ga0466967_0048943
324 Ga0495603_0035976
325 Ga0495629_0008939
326 Ga0495638_0012081
327 Ga0495583_0095625
328 Ga0495668_0101950
329 Ga0495647_0061997
330 Ga0495658_0007716
331 Ga0495624_0179188
332 Ga0495672_0017110
333 Ga0495593_0008839
334 Ga0496105_0155429
335 Ga0496113_0030218
336 Ga0496122_0050429
337 Ga0496126_0031287
338 Ga0501031_0050865
339 Ga0501034_0003095
340 Ga0501036_0174930
341 Ga0501037_0080146
342 Ga0501039_0236037
343 Ga0501040_0295554
344 Ga0501041_0068338
345 Ga0501041_0198331
346 Ga0501042_0374561
347 Ga0501048_0113015
348 Ga0501068_0000691
349 Ga0501070_0211093
350 Ga0501072_0116513
351 Ga0501072_0561801
352 Ga0501073_0001815
353 Ga0501074_0000103
354 Ga0501074_0163235
355 Ga0501075_0197091
356 Ga0501079_0483923
357 Ga0501080_0003114
358 Ga0501083_0227588
359 Ga0501045_0007522
360 Ga0501045_0010435
361 nmdc:mga00v17_25003_c1
362 nmdc:mga07m45_382427_c1
363 nmdc:mga05p37_213608_c1
364 nmdc:mga05p37_23041_c1
365 nmdc:mga05p37_439843_c1
366 nmdc:mga09592_117528_c1
367 nmdc:mga09592_23930_c1
368 nmdc:mga09592_261635_c1
369 nmdc:mga0qj67_144295_c1
370 nmdc:mga0qj67_50141_c1
371 nmdc:mga06r32_27038_c1
372 nmdc:mga06r32_44228_c1
373 nmdc:mga08y16_209169_c1
374 nmdc:mga08y16_238695_c1
375 nmdc:mga08y16_408157_c1
376 nmdc:mga0n895_338003_c1
377 nmdc:mga0n895_48695_c1
378 nmdc:mga0a205_54854_c1
379 Ga0500595_018696
380 Ga0500568_0004530
381 Ga0500637_0005516
382 Ga0501084_0054847
383 Ga0501084_0529594
384 Ga0530510_0302183
385 Ga0530510_0652946
386 2671120135
387 2793066303
388 2793078651
389 2908741212
390 2922431878
391 3005481824
392 8056690444

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00378

ECH_1

Enoyl-CoA hydratase/isomerase

11

254

0.88

PF16113

ECH_2

Enoyl-CoA hydratase/isomerase

16

243

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qfe-assembly1.cif.gz_A crystal structure of an enoyl-coa hydratase from mycobacterium smegmatis 0.9758 1 226
3r9q-assembly1.cif.gz_A structure of a probable enoyl-coa hydratase/isomerase from mycobacterium abscessus atcc 19977 / dsm 44196 0.9736 1 226
4z0m-assembly1.cif.gz_C echa5 mycobacterium tuberculosis 0.973 1 226
4qfe-assembly2.cif.gz_E crystal structure of an enoyl-coa hydratase from mycobacterium smegmatis 0.9725 1 226
4qfe-assembly1.cif.gz_D crystal structure of an enoyl-coa hydratase from mycobacterium smegmatis 0.9701 2 228
ID Description Score Start End Superfamily
3qkaE01 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9755 1 196 3.90.226.10
3rsiC01 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3; 0.9673 2 58 3.30.300.220
3qxiB01 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9544 2 192 3.90.226.10
3qkaE01 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9516 1 196 3.90.226.10
af_Q9VB17_37_239_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9418 1 196 3.90.226.10
ID Description Score Start End GO Terms
AF-A0A3C0HMH7-F1-model_v4 Crotonase/enoyl-CoA hydratase family protein 0.9821 1 198 GO:0003824
GO:0006631
AF-A0A357LAE3-F1-model_v4 Crotonase/enoyl-CoA hydratase family protein 0.9794 1 188 GO:0003824
AF-A0A535WIG3-F1-model_v4 Crotonase/enoyl-CoA hydratase family protein 0.9783 2 185 GO:0003824
AF-A0A1H4RA45-F1-model_v4 Enoyl-CoA hydratase/isomerase 0.9769 2 197 GO:0006631
GO:0016853
AF-A0A7V8YRW1-F1-model_v4 Enoyl-CoA hydratase/isomerase family protein 0.9757 1 149 GO:0006631
GO:0016853

Map