F301680

General Info

Members Datasets Scaffolds Average Seq Length
196 126 392 216

Family's Representative Sequence

Representative Sequence 3300025934|Ga0207686_10000062|Ga0207686_1000006232
Length 246
Sequence MRTRRPRSQHSRTFEPQVLLWGKANPVSTMSHQITVLIADDHPIFRKGLRQVIETDSQLKLLAEASDGEATIAYLAELKPAVAVLDIDMPGKDGFAVADYVRAHDLPIEIIFLTMHADEQIFNTALDAGVKGYVLKDDAVSGLIKAIRAVAGGENYISPDLATFLVKRSNQAAALARRKPALASLTPTEQRVLKMIADYKTSREIANELHISFRTVERHRANICEKLDLKGSHALLKFASEHRSQL

Samples

Sample ID Description Type Environment
1 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
77 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
78 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
79 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
80 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
81 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
85 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
86 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
87 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
88 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
89 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
90 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
91 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
92 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
93 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
94 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
95 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
96 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
97 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
98 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
99 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
102 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
103 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
104 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
105 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
106 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
107 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
108 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
109 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
110 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
111 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
112 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
113 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
114 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
115 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
116 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
117 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
118 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
119 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
120 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
121 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
122 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
123 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
124 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
125 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
126 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.96
Metatranscriptomes 2.04
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.1
Nodule 0
Rhizoplane 1.02
Rhizosphere 93.88
Stem 0
Stem Tuber 0
Unclassified 13.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207686_10000062 3300025934 Bacteria 97842
2 Ga0065715_10099641 3300005293 Bacteria 3387
3 Ga0065707_10110564 3300005295 Bacteria 2425
4 Ga0070670_100173717 3300005331 Bacteria 1869
5 Ga0068869_100046841 3300005334 Bacteria 3119
6 Ga0068869_100183109 3300005334 Bacteria 1643
7 Ga0070689_100028261 3300005340 Bacteria 4237
8 Ga0070689_100075306 3300005340 Bacteria 2643
9 Ga0070687_100036323 3300005343 Bacteria 2454
10 Ga0070661_100371195 3300005344 Unclassified 1126
11 Ga0070669_100376270 3300005353 Bacteria 1157
12 Ga0070675_100153268 3300005354 Bacteria 1977
13 Ga0070671_100000241 3300005355 Bacteria 36855
14 Ga0070674_100011782 3300005356 Bacteria 5337
15 Ga0070673_100225429 3300005364 Bacteria 1624
16 Ga0070673_100406947 3300005364 Bacteria 1218
17 Ga0070673_100626110 3300005364 Unclassified 983
18 Ga0070667_100241948 3300005367 Bacteria 1611
19 Ga0070667_100715215 3300005367 Unclassified 927
20 Ga0070705_100026434 3300005440 Bacteria 3159
21 Ga0070694_100003529 3300005444 Bacteria 9350
22 Ga0070694_100004224 3300005444 Bacteria 8638
23 Ga0070694_100009785 3300005444 Bacteria 5889
24 Ga0070663_100279521 3300005455 Bacteria 1330
25 Ga0068867_100100287 3300005459 Bacteria 2211
26 Ga0070685_10010383 3300005466 Bacteria 4838
27 Ga0070685_10331366 3300005466 Bacteria 1035
28 Ga0070699_100056637 3300005518 Bacteria 3395
29 Ga0070672_100494403 3300005543 Bacteria 1058
30 Ga0070686_100070891 3300005544 Bacteria 2280
31 Ga0070665_100208713 3300005548 Unclassified 1954
32 Ga0070665_100496519 3300005548 Bacteria 1231
33 Ga0070665_100671429 3300005548 Bacteria 1049
34 Ga0070704_100590034 3300005549 Bacteria 975
35 Ga0068859_100025765 3300005617 Bacteria 5898
36 Ga0068859_100037021 3300005617 Bacteria 4897
37 Ga0068859_100051808 3300005617 Bacteria 4126
38 Ga0068859_100081958 3300005617 Bacteria 3268
39 Ga0068864_100011932 3300005618 Bacteria 7174
40 Ga0068864_100049441 3300005618 Bacteria 3618
41 Ga0068861_100260002 3300005719 Bacteria 1486
42 Ga0068861_100348039 3300005719 Bacteria 1299
43 Ga0068863_100029032 3300005841 Bacteria 5283
44 Ga0068860_100043684 3300005843 Bacteria 4274
45 Ga0068862_100118378 3300005844 Bacteria 2332
46 Ga0068862_100125192 3300005844 Bacteria 2269
47 Ga0068862_100126436 3300005844 Bacteria 2257
48 Ga0068862_100287782 3300005844 Bacteria 1508
49 Ga0075364_10389153 3300006051 Bacteria 951
50 Ga0075367_10014517 3300006178 Bacteria 4266
51 Ga0075366_10003550 3300006195 Bacteria 8245
52 Ga0097621_100206699 3300006237 Bacteria 1706
53 Ga0097621_100562656 3300006237 Unclassified 1039
54 Ga0097621_100685485 3300006237 Unclassified 942
55 Ga0075370_10266937 3300006353 Bacteria 1016
56 Ga0068871_100538362 3300006358 Bacteria 1056
57 Ga0075428_100046028 3300006844 Bacteria 4793
58 Ga0075428_100112156 3300006844 Bacteria 2970
59 Ga0075430_100040750 3300006846 Bacteria 3931
60 Ga0075430_100139104 3300006846 Bacteria 2022
61 Ga0075430_100462177 3300006846 Bacteria 1047
62 Ga0075431_100026334 3300006847 Bacteria 5966
63 Ga0075431_101002706 3300006847 Bacteria 802
64 Ga0075429_100528746 3300006880 Bacteria 1033
65 Ga0097620_100025767 3300006931 Bacteria 5898
66 Ga0097620_100037029 3300006931 Bacteria 4897
67 Ga0097620_100051807 3300006931 Bacteria 4126
68 Ga0097620_100081957 3300006931 Bacteria 3268
69 Ga0111539_10056387 3300009094 Bacteria 4669
70 Ga0111539_10059640 3300009094 Bacteria 4524
71 Ga0111539_10404184 3300009094 Bacteria 1591
72 Ga0105247_10011122 3300009101 Bacteria 5427
73 Ga0114129_10003304 3300009147 Bacteria 22642
74 Ga0114129_11148083 3300009147 Bacteria 970
75 Ga0105243_10000027 3300009148 Bacteria 191224
76 Ga0105243_10000102 3300009148 Bacteria 97833
77 Ga0105243_10289555 3300009148 Bacteria 1479
78 Ga0105242_10000056 3300009176 Bacteria 76052
79 Ga0105242_10000122 3300009176 Bacteria 57301
80 Ga0105242_10016199 3300009176 Bacteria 5792
81 Ga0105248_10019617 3300009177 Bacteria 7484
82 Ga0105249_10076691 3300009553 Bacteria 3099
83 Ga0105249_10718561 3300009553 Bacteria 1060
84 Ga0105249_10738082 3300009553 Unclassified 1046
85 Ga0157374_10064429 3300013296 Unclassified 3439
86 Ga0163162_10082311 3300013306 Bacteria 3291
87 Ga0163162_10322172 3300013306 Unclassified 1678
88 Ga0157375_10669524 3300013308 Bacteria 1193
89 Ga0163163_10213857 3300014325 Bacteria 1977
90 Ga0163163_10523987 3300014325 Bacteria 1247
91 Ga0163163_11180176 3300014325 Bacteria 828
92 Ga0157380_10211264 3300014326 Bacteria 1729
93 Ga0157380_10428658 3300014326 Unclassified 1264
94 Ga0157380_10586158 3300014326 Bacteria 1100
95 Ga0163161_10480726 3300017792 Bacteria 1008
96 Ga0207646_10692256 3300025922 Bacteria 912
97 Ga0207681_10054651 3300025923 Bacteria 2716
98 Ga0207681_10234048 3300025923 Bacteria 1427
99 Ga0207659_10374606 3300025926 Bacteria 1186
100 Ga0207644_10000253 3300025931 Bacteria 36086
101 Ga0207686_10000008 3300025934 Bacteria 245575
102 Ga0207686_10298084 3300025934 Bacteria 1196
103 Ga0207709_10000025 3300025935 Bacteria 364795
104 Ga0207709_10000091 3300025935 Bacteria 144622
105 Ga0207670_10027301 3300025936 Bacteria 3607
106 Ga0207670_10364505 3300025936 Bacteria 1147
107 Ga0207689_10096943 3300025942 Bacteria 2422
108 Ga0207689_10211490 3300025942 Bacteria 1602
109 Ga0207712_10278295 3300025961 Unclassified 1365
110 Ga0207658_10080814 3300025986 Bacteria 2491
111 Ga0207678_10195998 3300026067 Unclassified 1726
112 Ga0207708_10088280 3300026075 Bacteria 2388
113 Ga0207708_10682004 3300026075 Bacteria 877
114 Ga0207708_10827091 3300026075 Unclassified 798
115 Ga0207648_10131394 3300026089 Bacteria 2204
116 Ga0207676_10097961 3300026095 Bacteria 2424
117 Ga0207676_10308948 3300026095 Bacteria 1447
118 Ga0207676_10551140 3300026095 Bacteria 1101
119 Ga0207674_10222824 3300026116 Bacteria 1834
120 Ga0207675_100427010 3300026118 Bacteria 1310
121 Ga0207428_10055498 3300027907 Bacteria 3150
122 Ga0207428_10132128 3300027907 Bacteria 1909
123 Ga0268266_10293785 3300028379 Bacteria 1514
124 Ga0268266_10514684 3300028379 Bacteria 1144
125 Ga0268265_10111614 3300028380 Bacteria 2233
126 Ga0268264_10185978 3300028381 Bacteria 1890
127 Ga0268264_10319057 3300028381 Bacteria 1468
128 Ga0265332_10142772 3300031238 Bacteria 1003
129 Ga0307408_100344981 3300031548 Unclassified 1262
130 Ga0316575_10010994 3300031665 Bacteria 3340
131 Ga0316579_10003807 3300031691 Bacteria 5940
132 Ga0316576_10090117 3300031727 Bacteria 2284
133 Ga0316576_10118013 3300031727 Bacteria 1991
134 Ga0316578_10025900 3300031728 Bacteria 3303
135 Ga0316578_10153249 3300031728 Bacteria 1388
136 Ga0316577_10051367 3300031733 Bacteria 2300
137 Ga0316577_10333526 3300031733 Bacteria 860
138 Ga0307413_10135343 3300031824 Bacteria 1693
139 Ga0307410_10004365 3300031852 Bacteria 7298
140 Ga0307410_10153703 3300031852 Bacteria 1716
141 Ga0307406_10099887 3300031901 Bacteria 1974
142 Ga0307406_10651866 3300031901 Unclassified 874
143 Ga0307412_10380102 3300031911 Bacteria 1143
144 Ga0307409_100083968 3300031995 Unclassified 2584
145 Ga0307409_100119265 3300031995 Bacteria 2230
146 Ga0307416_100385470 3300032002 Bacteria 1433
147 Ga0307416_100827676 3300032002 Bacteria 1023
148 Ga0307411_10138839 3300032005 Bacteria 1789
149 Ga0307411_10383460 3300032005 Bacteria 1157
150 Ga0316583_10001499 3300032133 Bacteria 7833
151 Ga0316585_10049186 3300032137 Bacteria 1351
152 Ga0316580_10001887 3300032139 Bacteria 5632
153 Ga0316593_10210592 3300032168 Unclassified 720
154 Ga0316592_1004171 3300033524 Bacteria 2668
155 Ga0316588_1051145 3300033528 Bacteria 1002
156 Ga0316596_1057243 3300033541 Unclassified 1037
157 Ga0316584_0063654 3300036712 Bacteria 2761
158 Ga0316584_0082428 3300036712 Bacteria 2409
159 Ga0316581_0052225 3300037588 Bacteria 1253
160 Ga0451807_0434149 3300041486 Unclassified 783
161 Ga0451807_2093562 3300041486 Unclassified 952
162 Ga0451577_0005625 3300042876 Bacteria 12739
163 Ga0451577_0114389 3300042876 Unclassified 2416
164 Ga0453683_0004331 3300044673 Bacteria 10103
165 Ga0453683_0029512 3300044673 Bacteria 3468
166 Ga0453683_0198372 3300044673 Bacteria 1274
167 Ga0453684_0102138 3300044712 Unclassified 3506
168 Ga0453684_0460989 3300044712 Bacteria 1413
169 Ga0451576_0135147 3300045051 Unclassified 2571
170 Ga0495629_0683411 3300046459 Unclassified 682
171 Ga0495638_0108395 3300046460 Bacteria 1652
172 Ga0495662_0072907 3300046476 Bacteria 1665
173 Ga0495616_0216523 3300046513 Bacteria 836
174 Ga0495630_0000047 3300046517 Bacteria 98136
175 Ga0495666_0138171 3300046526 Bacteria 1137
176 Ga0495640_0032775 3300046533 Bacteria 3698
177 Ga0495586_0000003 3300046535 Bacteria 192041
178 Ga0495656_0259289 3300046615 Bacteria 880
179 Ga0495634_0021730 3300046642 Unclassified 4530
180 Ga0495659_0019865 3300046664 Unclassified 2251
181 Ga0495658_0025462 3300046683 Bacteria 3162
182 Ga0495613_0253137 3300046689 Bacteria 1229
183 Ga0495674_0079382 3300047319 Bacteria 2818
184 nmdc:mga07m45_236973_c1 3300050496 Bacteria 1062
185 nmdc:mga05p37_350_c1 3300050507 Bacteria 46341
186 nmdc:mga09592_114201_c1 3300050508 Bacteria 2318
187 nmdc:mga0qj67_146675_c1 3300050509 Bacteria 1913
188 nmdc:mga06r32_35754_c1 3300050510 Bacteria 4687
189 nmdc:mga06r32_974068_c1 3300050510 Bacteria 802
190 nmdc:mga08y16_48757_c1 3300050511 Bacteria 4432
191 nmdc:mga08y16_78923_c1 3300050511 Unclassified 3431
192 Ga0500641_0093724 3300053096 Bacteria 1283
193 Ga0500555_000075 3300053103 Bacteria 48750
194 Ga0500577_0001104 3300053142 Bacteria 6924
195 Ga0500616_0012564 3300053153 Bacteria 4953
196 Ga0500645_000053 3300053730 Bacteria 95820
197 Ga0207686_10000062
198 Ga0065715_10099641
199 Ga0065707_10110564
200 Ga0070670_100173717
201 Ga0068869_100046841
202 Ga0068869_100183109
203 Ga0070689_100028261
204 Ga0070689_100075306
205 Ga0070687_100036323
206 Ga0070661_100371195
207 Ga0070669_100376270
208 Ga0070675_100153268
209 Ga0070671_100000241
210 Ga0070674_100011782
211 Ga0070673_100225429
212 Ga0070673_100406947
213 Ga0070673_100626110
214 Ga0070667_100241948
215 Ga0070667_100715215
216 Ga0070705_100026434
217 Ga0070694_100003529
218 Ga0070694_100004224
219 Ga0070694_100009785
220 Ga0070663_100279521
221 Ga0068867_100100287
222 Ga0070685_10010383
223 Ga0070685_10331366
224 Ga0070699_100056637
225 Ga0070672_100494403
226 Ga0070686_100070891
227 Ga0070665_100208713
228 Ga0070665_100496519
229 Ga0070665_100671429
230 Ga0070704_100590034
231 Ga0068859_100025765
232 Ga0068859_100037021
233 Ga0068859_100051808
234 Ga0068859_100081958
235 Ga0068864_100011932
236 Ga0068864_100049441
237 Ga0068861_100260002
238 Ga0068861_100348039
239 Ga0068863_100029032
240 Ga0068860_100043684
241 Ga0068862_100118378
242 Ga0068862_100125192
243 Ga0068862_100126436
244 Ga0068862_100287782
245 Ga0075364_10389153
246 Ga0075367_10014517
247 Ga0075366_10003550
248 Ga0097621_100206699
249 Ga0097621_100562656
250 Ga0097621_100685485
251 Ga0075370_10266937
252 Ga0068871_100538362
253 Ga0075428_100046028
254 Ga0075428_100112156
255 Ga0075430_100040750
256 Ga0075430_100139104
257 Ga0075430_100462177
258 Ga0075431_100026334
259 Ga0075431_101002706
260 Ga0075429_100528746
261 Ga0097620_100025767
262 Ga0097620_100037029
263 Ga0097620_100051807
264 Ga0097620_100081957
265 Ga0111539_10056387
266 Ga0111539_10059640
267 Ga0111539_10404184
268 Ga0105247_10011122
269 Ga0114129_10003304
270 Ga0114129_11148083
271 Ga0105243_10000027
272 Ga0105243_10000102
273 Ga0105243_10289555
274 Ga0105242_10000056
275 Ga0105242_10000122
276 Ga0105242_10016199
277 Ga0105248_10019617
278 Ga0105249_10076691
279 Ga0105249_10718561
280 Ga0105249_10738082
281 Ga0157374_10064429
282 Ga0163162_10082311
283 Ga0163162_10322172
284 Ga0157375_10669524
285 Ga0163163_10213857
286 Ga0163163_10523987
287 Ga0163163_11180176
288 Ga0157380_10211264
289 Ga0157380_10428658
290 Ga0157380_10586158
291 Ga0163161_10480726
292 Ga0207646_10692256
293 Ga0207681_10054651
294 Ga0207681_10234048
295 Ga0207659_10374606
296 Ga0207644_10000253
297 Ga0207686_10000008
298 Ga0207686_10298084
299 Ga0207709_10000025
300 Ga0207709_10000091
301 Ga0207670_10027301
302 Ga0207670_10364505
303 Ga0207689_10096943
304 Ga0207689_10211490
305 Ga0207712_10278295
306 Ga0207658_10080814
307 Ga0207678_10195998
308 Ga0207708_10088280
309 Ga0207708_10682004
310 Ga0207708_10827091
311 Ga0207648_10131394
312 Ga0207676_10097961
313 Ga0207676_10308948
314 Ga0207676_10551140
315 Ga0207674_10222824
316 Ga0207675_100427010
317 Ga0207428_10055498
318 Ga0207428_10132128
319 Ga0268266_10293785
320 Ga0268266_10514684
321 Ga0268265_10111614
322 Ga0268264_10185978
323 Ga0268264_10319057
324 Ga0265332_10142772
325 Ga0307408_100344981
326 Ga0316575_10010994
327 Ga0316579_10003807
328 Ga0316576_10090117
329 Ga0316576_10118013
330 Ga0316578_10025900
331 Ga0316578_10153249
332 Ga0316577_10051367
333 Ga0316577_10333526
334 Ga0307413_10135343
335 Ga0307410_10004365
336 Ga0307410_10153703
337 Ga0307406_10099887
338 Ga0307406_10651866
339 Ga0307412_10380102
340 Ga0307409_100083968
341 Ga0307409_100119265
342 Ga0307416_100385470
343 Ga0307416_100827676
344 Ga0307411_10138839
345 Ga0307411_10383460
346 Ga0316583_10001499
347 Ga0316585_10049186
348 Ga0316580_10001887
349 Ga0316593_10210592
350 Ga0316592_1004171
351 Ga0316588_1051145
352 Ga0316596_1057243
353 Ga0316584_0063654
354 Ga0316584_0082428
355 Ga0316581_0052225
356 Ga0451807_0434149
357 Ga0451807_2093562
358 Ga0451577_0005625
359 Ga0451577_0114389
360 Ga0453683_0004331
361 Ga0453683_0029512
362 Ga0453683_0198372
363 Ga0453684_0102138
364 Ga0453684_0460989
365 Ga0451576_0135147
366 Ga0495629_0683411
367 Ga0495638_0108395
368 Ga0495662_0072907
369 Ga0495616_0216523
370 Ga0495630_0000047
371 Ga0495666_0138171
372 Ga0495640_0032775
373 Ga0495586_0000003
374 Ga0495656_0259289
375 Ga0495634_0021730
376 Ga0495659_0019865
377 Ga0495658_0025462
378 Ga0495613_0253137
379 Ga0495674_0079382
380 nmdc:mga07m45_236973_c1
381 nmdc:mga05p37_350_c1
382 nmdc:mga09592_114201_c1
383 nmdc:mga0qj67_146675_c1
384 nmdc:mga06r32_35754_c1
385 nmdc:mga06r32_974068_c1
386 nmdc:mga08y16_48757_c1
387 nmdc:mga08y16_78923_c1
388 Ga0500641_0093724
389 Ga0500555_000075
390 Ga0500577_0001104
391 Ga0500616_0012564
392 Ga0500645_000053

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

36

148

0.97

PF00196

GerE

Bacterial regulatory proteins, luxR family

183

239

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4le2-assembly4.cif.gz_D-2 crystal structure of the unphosphorylated receiver domain of desr in the active state 0.9605 2 132
4le2-assembly3.cif.gz_B-2 crystal structure of the unphosphorylated receiver domain of desr in the active state 0.9557 1 131
3eul-assembly2.cif.gz_B structure of the signal receiver domain of the putative response regulator narl from mycobacterium tuberculosis 0.9556 1 124
7od9-assembly1.cif.gz_B crystal structure of activated chey fused to the c-terminal domain of chef 0.9482 3 120
3eul-assembly2.cif.gz_B structure of the signal receiver domain of the putative response regulator narl from mycobacterium tuberculosis 0.9482 1 124
ID Description Score Start End Superfamily
3eulC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9545 3 118 3.40.50.2300
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9531 4 84 3.40.50.2300
4le0B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9495 4 136 3.40.50.2300
3kloA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9486 150 206 1.10.10.10
3klnC02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9481 150 206 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7C1N8P5-F1-model_v4 Response regulator 0.9704 2 142 GO:0000160
AF-A0A849ENU5-F1-model_v4 Response regulator transcription factor 0.9681 1 132 GO:0000160
AF-A0A661KZ54-F1-model_v4 DNA-binding response regulator 0.9635 1 132 GO:0000160
GO:0003677
AF-A0A0F9FFZ2-F1-model_v4 Response regulatory domain-containing protein 0.9617 2 134 GO:0000160
GO:0003677
AF-A0A6V8NDC5-F1-model_v4 Response regulatory domain-containing protein 0.958 2 135 GO:0000160
GO:0003677

Map