F301330

General Info

Members Datasets Scaffolds Average Seq Length
196 138 392 418

Family's Representative Sequence

Representative Sequence 3300005981|Ga0081538_10000072|Ga0081538_1000007267
Length 451
Sequence MTTADRVWSDDASGRSLVATRRARVAAADDAAELAEQVRVRVRDIGVDPQRDTDTVRRIAESVAQARDERSLTGAVEPLEDVPALVDDLVARVSGFGPLQRYLDDPAVEEVWINEPSRVFVARQGRHELTPTILTADEVRELVERMLKTSGRRLDLSQPFVDAWLPGGHRLHVVLEGISRDFAAVNIRKFVARAHNLEDLIALGTLNARAAAFLRAAVTAGLDIVVSGGTQAGKTTLLNCLAAAIPGADRVVSAEEVFELKFAHPDWVAMQTRQAGLEGTGEIRLRELVKQALRMRPSRIIVGEVRAEECLDLLLALNAGLPGMASIHANSAREALVKMCTLPLLAGENIGSRFVVPTVAASVDLVVHIAIDAGGVRQVEEIVAVPGRVENGLIETEPMFVRRDDRLERLSGMPPRPERFARQGIDLQRVLAGDSTGASGRPPANGAGGPT

Samples

Sample ID Description Type Environment
1 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
32 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
51 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
53 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
57 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
60 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
61 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
62 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
63 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
64 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
65 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
66 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
67 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
68 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
69 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
70 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
71 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
72 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
73 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
74 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
75 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
76 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
77 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
78 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
79 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
80 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
81 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
82 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
83 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
84 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
85 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
86 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
102 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
103 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
104 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
105 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
106 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
107 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
108 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
109 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
110 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
111 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
112 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
113 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
114 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
117 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
118 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
119 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
120 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
121 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
122 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
123 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
124 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
125 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
126 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
127 2643221561 Nocardioides sp. Root151 Isolate Unclassified
128 2643221615 Nocardioides sp. Root224 Isolate Unclassified
129 2643221641 Nocardioides sp. Root122 Isolate Unclassified
130 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
131 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
132 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
133 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
134 2739367898 Nocardioides sp. CF479 Isolate Unclassified
135 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
136 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
137 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
138 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.37
Metatranscriptomes 0.51
Isolates 6.12

Biome Distribution

Category Percentage (%)
Aerial Root 1.02
Bulb 0
Endosphere 6.63
Nodule 0.51
Rhizoplane 8.67
Rhizosphere 75
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081538_10000072 3300005981 Bacteria 95247
2 LJQas_1005672 3300000549 Bacteria 1576
3 JGI24735J21928_10009556 3300002067 Bacteria 3109
4 Ga0070658_10039777 3300005327 Bacteria 3793
5 Ga0070683_100150936 3300005329 Bacteria 2203
6 Ga0068868_100134066 3300005338 Bacteria 2029
7 Ga0070660_100012221 3300005339 Bacteria 6129
8 Ga0070660_100053694 3300005339 Bacteria 3109
9 Ga0070660_100135338 3300005339 Bacteria 1974
10 Ga0070687_100003736 3300005343 Bacteria 5962
11 Ga0070659_100013786 3300005366 Bacteria 6028
12 Ga0070667_100009449 3300005367 Bacteria 8088
13 Ga0070714_100002942 3300005435 Bacteria 12613
14 Ga0070681_10274844 3300005458 Bacteria 1596
15 Ga0068867_100024295 3300005459 Bacteria 4342
16 Ga0070698_100006094 3300005471 Bacteria 13131
17 Ga0070679_100002938 3300005530 Bacteria 15518
18 Ga0070664_100006797 3300005564 Bacteria 9223
19 Ga0070664_100373748 3300005564 Bacteria 1300
20 Ga0068864_100064147 3300005618 Bacteria 3185
21 Ga0068860_100000389 3300005843 Bacteria 57408
22 Ga0081455_10053873 3300005937 Bacteria 3434
23 Ga0075365_10039130 3300006038 Bacteria 3086
24 Ga0075365_10044643 3300006038 Bacteria 2905
25 Ga0075365_10050415 3300006038 Bacteria 2746
26 Ga0075365_10053665 3300006038 Bacteria 2670
27 Ga0075364_10007496 3300006051 Bacteria 6486
28 Ga0075367_10086455 3300006178 Bacteria 1903
29 Ga0075431_100000622 3300006847 Bacteria 29945
30 Ga0068865_100003345 3300006881 Bacteria 9604
31 Ga0105245_10017187 3300009098 Bacteria 6310
32 Ga0105243_10009666 3300009148 Bacteria 7341
33 Ga0105239_10186105 3300010375 Bacteria 2324
34 Ga0105246_10209144 3300011119 Bacteria 1522
35 Ga0157369_10018940 3300013105 Bacteria 7712
36 Ga0157369_10197715 3300013105 Bacteria 2110
37 Ga0157375_10005951 3300013308 Bacteria 10631
38 Ga0157377_10096451 3300014745 Bacteria 1754
39 Ga0206353_10917248 3300020082 Bacteria 1785
40 Ga0207642_10040659 3300025899 Bacteria 2030
41 Ga0207647_10030776 3300025904 Bacteria 3459
42 Ga0207647_10055556 3300025904 Bacteria 2433
43 Ga0207707_10186786 3300025912 Bacteria 1809
44 Ga0207657_10042655 3300025919 Bacteria 4001
45 Ga0207657_10055285 3300025919 Bacteria 3429
46 Ga0207657_10246338 3300025919 Bacteria 1426
47 Ga0207652_10009962 3300025921 Bacteria 7651
48 Ga0207687_10183622 3300025927 Bacteria 1622
49 Ga0207669_10114626 3300025937 Bacteria 1815
50 Ga0207704_10082962 3300025938 Bacteria 2078
51 Ga0207691_10012279 3300025940 Bacteria 8210
52 Ga0207711_10006483 3300025941 Bacteria 9852
53 Ga0207711_10078757 3300025941 Bacteria 2875
54 Ga0207661_10028887 3300025944 Bacteria 4252
55 Ga0207679_10088063 3300025945 Bacteria 2393
56 Ga0207667_10057074 3300025949 Bacteria 4100
57 Ga0207678_10043139 3300026067 Bacteria 3904
58 Ga0207708_10001231 3300026075 Bacteria 19306
59 Ga0207708_10100791 3300026075 Bacteria 2235
60 Ga0207648_10019152 3300026089 Bacteria 6177
61 Ga0207698_10346685 3300026142 Bacteria 1401
62 Ga0207428_10005624 3300027907 Bacteria 11658
63 Ga0268264_10000250 3300028381 Bacteria 100909
64 Ga0307513_10099721 3300031456 Bacteria 2932
65 Ga0307412_10179833 3300031911 Bacteria 1590
66 Ga0307409_100230632 3300031995 Bacteria 1678
67 Ga0307416_100334185 3300032002 Bacteria 1524
68 Ga0395898_0201551 3300037466 Bacteria 1900
69 Ga0436364_0417282 3300037853 Bacteria 3459
70 Ga0395901_0080734 3300038443 Bacteria 3396
71 Ga0395901_0233281 3300038443 Bacteria 1921
72 Ga0451833_0794084 3300041491 Bacteria 2901
73 Ga0451833_0949740 3300041491 Bacteria 4946
74 Ga0451843_0259219 3300041509 Bacteria 1705
75 Ga0451853_1418365 3300041512 Bacteria 2655
76 Ga0439464_0014755 3300042439 Bacteria 2104
77 Ga0466966_0002702 3300044684 Bacteria 11630
78 Ga0466961_0095281 3300044693 Bacteria 1877
79 Ga0466963_0004496 3300044694 Bacteria 8111
80 Ga0466964_0043696 3300044706 Bacteria 1818
81 Ga0466970_0096988 3300044765 Bacteria 1604
82 Ga0466957_0131389 3300044842 Bacteria 1604
83 Ga0466960_0005733 3300044901 Bacteria 4938
84 Ga0466958_0059905 3300045836 Bacteria 2317
85 Ga0466967_0000603 3300045976 Bacteria 17857
86 Ga0466967_0005310 3300045976 Bacteria 8895
87 Ga0466967_0080719 3300045976 Bacteria 2936
88 Ga0466967_0123783 3300045976 Bacteria 2393
89 Ga0495664_0128101 3300046477 Bacteria 1536
90 Ga0495658_0121894 3300046683 Bacteria 1578
91 Ga0496101_0024317 3300048904 Bacteria 4192
92 Ga0496102_0014225 3300048905 Bacteria 6914
93 Ga0496104_0047780 3300048907 Bacteria 4034
94 Ga0496105_0024270 3300048908 Bacteria 4927
95 Ga0496106_0034533 3300048909 Bacteria 3778
96 Ga0496106_0141047 3300048909 Bacteria 1896
97 Ga0496108_0044116 3300048911 Bacteria 3723
98 Ga0496109_0078224 3300048912 Bacteria 3045
99 Ga0496110_0086151 3300048913 Bacteria 2804
100 Ga0496110_0103822 3300048913 Bacteria 2550
101 Ga0496110_0129318 3300048913 Bacteria 2280
102 Ga0496113_0105155 3300048916 Bacteria 2192
103 Ga0496114_0017206 3300048917 Bacteria 5831
104 Ga0496114_0029677 3300048917 Bacteria 4497
105 Ga0496114_0040672 3300048917 Bacteria 3849
106 Ga0496114_0056004 3300048917 Bacteria 3289
107 Ga0496114_0065355 3300048917 Bacteria 3048
108 Ga0496123_0006047 3300048926 Bacteria 11886
109 Ga0496126_0017320 3300048929 Bacteria 7181
110 Ga0501031_0005323 3300049568 Bacteria 8379
111 Ga0501031_0016521 3300049568 Bacteria 4794
112 Ga0501032_0007601 3300049569 Bacteria 7911
113 Ga0501032_0054174 3300049569 Bacteria 2700
114 Ga0501033_0001802 3300049570 Bacteria 18698
115 Ga0501034_0014036 3300049571 Bacteria 8249
116 Ga0501034_0068402 3300049571 Bacteria 3561
117 Ga0501036_0003703 3300049572 Bacteria 12247
118 Ga0501036_0023302 3300049572 Bacteria 5214
119 Ga0501037_0002976 3300049573 Bacteria 12300
120 Ga0501037_0015840 3300049573 Bacteria 5550
121 Ga0501038_0033663 3300049574 Bacteria 4512
122 Ga0501039_0019413 3300049575 Bacteria 5210
123 Ga0501039_0112531 3300049575 Bacteria 2128
124 Ga0501040_0015328 3300049576 Bacteria 5068
125 Ga0501040_0020417 3300049576 Bacteria 4414
126 Ga0501041_0009728 3300049577 Bacteria 5664
127 Ga0501042_0018278 3300049578 Bacteria 4852
128 Ga0501042_0027210 3300049578 Bacteria 4020
129 Ga0501042_0138727 3300049578 Bacteria 1753
130 Ga0501043_0028918 3300049579 Bacteria 4350
131 Ga0501046_0002980 3300049580 Bacteria 15644
132 Ga0501046_0013252 3300049580 Bacteria 6986
133 Ga0501046_0069973 3300049580 Bacteria 2729
134 Ga0501047_0008227 3300049581 Bacteria 9846
135 Ga0501048_0004124 3300049582 Bacteria 11076
136 Ga0501048_0019802 3300049582 Bacteria 4934
137 Ga0501067_0007441 3300049583 Bacteria 6084
138 Ga0501068_0010706 3300049584 Bacteria 5156
139 Ga0501069_0053840 3300049585 Bacteria 2241
140 Ga0501070_0001061 3300049586 Bacteria 24745
141 Ga0501070_0003254 3300049586 Bacteria 14103
142 Ga0501070_0034996 3300049586 Bacteria 4198
143 Ga0501070_0106842 3300049586 Bacteria 2313
144 Ga0501071_0004136 3300049587 Bacteria 9171
145 Ga0501071_0004278 3300049587 Bacteria 9044
146 Ga0501071_0015619 3300049587 Bacteria 5213
147 Ga0501072_0059975 3300049588 Bacteria 3000
148 Ga0501074_0018662 3300049590 Bacteria 5041
149 Ga0501074_0037251 3300049590 Bacteria 3526
150 Ga0501075_0039139 3300049591 Bacteria 3548
151 Ga0501075_0099501 3300049591 Bacteria 2208
152 Ga0501076_0014112 3300049592 Bacteria 6007
153 Ga0501076_0016257 3300049592 Bacteria 5638
154 Ga0501077_0012166 3300049593 Bacteria 5386
155 Ga0501079_0021905 3300049741 Bacteria 4894
156 Ga0501079_0045856 3300049741 Bacteria 3374
157 Ga0501080_0013405 3300049742 Bacteria 7541
158 Ga0501080_0083427 3300049742 Bacteria 2969
159 Ga0501080_0084439 3300049742 Bacteria 2950
160 Ga0501081_0037591 3300049743 Bacteria 3304
161 Ga0501035_0007750 3300049822 Bacteria 10029
162 Ga0501035_0011921 3300049822 Bacteria 8045
163 Ga0501035_0020412 3300049822 Bacteria 6084
164 Ga0501035_0133730 3300049822 Bacteria 2161
165 Ga0501044_0010884 3300049823 Bacteria 9871
166 Ga0501045_0018904 3300049824 Bacteria 4906
167 Ga0501045_0042359 3300049824 Bacteria 3314
168 nmdc:mga03n38_12678_c1 3300050490 Bacteria 3180
169 nmdc:mga0yw44_47751_c1 3300050492 Bacteria 2579
170 nmdc:mga0yw44_48201_c1 3300050492 Bacteria 2568
171 nmdc:mga0yw44_63890_c1 3300050492 Bacteria 2264
172 nmdc:mga05p37_1651_c1 3300050507 Bacteria 25885
173 nmdc:mga06r32_218_c1 3300050510 Bacteria 46450
174 Ga0500641_0002980 3300053096 Bacteria 5994
175 Ga0500641_0022653 3300053096 Bacteria 2408
176 Ga0500573_0005326 3300053140 Bacteria 6885
177 Ga0501084_0011337 3300054114 Bacteria 7383
178 Ga0501084_0059231 3300054114 Bacteria 3205
179 Ga0501082_0017180 3300060353 Bacteria 6233
180 Ga0466962_0023662 3300061719 Bacteria 2952
181 Ga0466962_0054049 3300061719 Bacteria 1919
182 Ga0530510_0014014 3300061734 Bacteria 5650
183 Ga0530510_0040565 3300061734 Bacteria 3360
184 Ga0530510_0105145 3300061734 Bacteria 2066
185 2643827915 2643221561 Bacteria 4984412
186 2644091698 2643221615 Bacteria 5487866
187 2644231137 2643221641 Bacteria 4490190
188 2644321501 2643221657 Bacteria 5490246
189 2644536748 2643221697 Bacteria 3575694
190 2645722777 2643221961 Bacteria 3919167
191 2645725741 2643221962 Bacteria 3874254
192 2740166484 2739367898 Bacteria 4367674
193 2852644965 2852643534 Bacteria 3013378
194 2984577341 2984576629 Bacteria 4248407
195 2990259502 2990256926 Bacteria 4252839
196 8054610479 8054609563 Bacteria 5170090
197 Ga0081538_10000072
198 LJQas_1005672
199 JGI24735J21928_10009556
200 Ga0070658_10039777
201 Ga0070683_100150936
202 Ga0068868_100134066
203 Ga0070660_100012221
204 Ga0070660_100053694
205 Ga0070660_100135338
206 Ga0070687_100003736
207 Ga0070659_100013786
208 Ga0070667_100009449
209 Ga0070714_100002942
210 Ga0070681_10274844
211 Ga0068867_100024295
212 Ga0070698_100006094
213 Ga0070679_100002938
214 Ga0070664_100006797
215 Ga0070664_100373748
216 Ga0068864_100064147
217 Ga0068860_100000389
218 Ga0081455_10053873
219 Ga0075365_10039130
220 Ga0075365_10044643
221 Ga0075365_10050415
222 Ga0075365_10053665
223 Ga0075364_10007496
224 Ga0075367_10086455
225 Ga0075431_100000622
226 Ga0068865_100003345
227 Ga0105245_10017187
228 Ga0105243_10009666
229 Ga0105239_10186105
230 Ga0105246_10209144
231 Ga0157369_10018940
232 Ga0157369_10197715
233 Ga0157375_10005951
234 Ga0157377_10096451
235 Ga0206353_10917248
236 Ga0207642_10040659
237 Ga0207647_10030776
238 Ga0207647_10055556
239 Ga0207707_10186786
240 Ga0207657_10042655
241 Ga0207657_10055285
242 Ga0207657_10246338
243 Ga0207652_10009962
244 Ga0207687_10183622
245 Ga0207669_10114626
246 Ga0207704_10082962
247 Ga0207691_10012279
248 Ga0207711_10006483
249 Ga0207711_10078757
250 Ga0207661_10028887
251 Ga0207679_10088063
252 Ga0207667_10057074
253 Ga0207678_10043139
254 Ga0207708_10001231
255 Ga0207708_10100791
256 Ga0207648_10019152
257 Ga0207698_10346685
258 Ga0207428_10005624
259 Ga0268264_10000250
260 Ga0307513_10099721
261 Ga0307412_10179833
262 Ga0307409_100230632
263 Ga0307416_100334185
264 Ga0395898_0201551
265 Ga0436364_0417282
266 Ga0395901_0080734
267 Ga0395901_0233281
268 Ga0451833_0794084
269 Ga0451833_0949740
270 Ga0451843_0259219
271 Ga0451853_1418365
272 Ga0439464_0014755
273 Ga0466966_0002702
274 Ga0466961_0095281
275 Ga0466963_0004496
276 Ga0466964_0043696
277 Ga0466970_0096988
278 Ga0466957_0131389
279 Ga0466960_0005733
280 Ga0466958_0059905
281 Ga0466967_0000603
282 Ga0466967_0005310
283 Ga0466967_0080719
284 Ga0466967_0123783
285 Ga0495664_0128101
286 Ga0495658_0121894
287 Ga0496101_0024317
288 Ga0496102_0014225
289 Ga0496104_0047780
290 Ga0496105_0024270
291 Ga0496106_0034533
292 Ga0496106_0141047
293 Ga0496108_0044116
294 Ga0496109_0078224
295 Ga0496110_0086151
296 Ga0496110_0103822
297 Ga0496110_0129318
298 Ga0496113_0105155
299 Ga0496114_0017206
300 Ga0496114_0029677
301 Ga0496114_0040672
302 Ga0496114_0056004
303 Ga0496114_0065355
304 Ga0496123_0006047
305 Ga0496126_0017320
306 Ga0501031_0005323
307 Ga0501031_0016521
308 Ga0501032_0007601
309 Ga0501032_0054174
310 Ga0501033_0001802
311 Ga0501034_0014036
312 Ga0501034_0068402
313 Ga0501036_0003703
314 Ga0501036_0023302
315 Ga0501037_0002976
316 Ga0501037_0015840
317 Ga0501038_0033663
318 Ga0501039_0019413
319 Ga0501039_0112531
320 Ga0501040_0015328
321 Ga0501040_0020417
322 Ga0501041_0009728
323 Ga0501042_0018278
324 Ga0501042_0027210
325 Ga0501042_0138727
326 Ga0501043_0028918
327 Ga0501046_0002980
328 Ga0501046_0013252
329 Ga0501046_0069973
330 Ga0501047_0008227
331 Ga0501048_0004124
332 Ga0501048_0019802
333 Ga0501067_0007441
334 Ga0501068_0010706
335 Ga0501069_0053840
336 Ga0501070_0001061
337 Ga0501070_0003254
338 Ga0501070_0034996
339 Ga0501070_0106842
340 Ga0501071_0004136
341 Ga0501071_0004278
342 Ga0501071_0015619
343 Ga0501072_0059975
344 Ga0501074_0018662
345 Ga0501074_0037251
346 Ga0501075_0039139
347 Ga0501075_0099501
348 Ga0501076_0014112
349 Ga0501076_0016257
350 Ga0501077_0012166
351 Ga0501079_0021905
352 Ga0501079_0045856
353 Ga0501080_0013405
354 Ga0501080_0083427
355 Ga0501080_0084439
356 Ga0501081_0037591
357 Ga0501035_0007750
358 Ga0501035_0011921
359 Ga0501035_0020412
360 Ga0501035_0133730
361 Ga0501044_0010884
362 Ga0501045_0018904
363 Ga0501045_0042359
364 nmdc:mga03n38_12678_c1
365 nmdc:mga0yw44_47751_c1
366 nmdc:mga0yw44_48201_c1
367 nmdc:mga0yw44_63890_c1
368 nmdc:mga05p37_1651_c1
369 nmdc:mga06r32_218_c1
370 Ga0500641_0002980
371 Ga0500641_0022653
372 Ga0500573_0005326
373 Ga0501084_0011337
374 Ga0501084_0059231
375 Ga0501082_0017180
376 Ga0466962_0023662
377 Ga0466962_0054049
378 Ga0530510_0014014
379 Ga0530510_0040565
380 Ga0530510_0105145
381 2643827915
382 2644091698
383 2644231137
384 2644321501
385 2644536748
386 2645722777
387 2645725741
388 2740166484
389 2852644965
390 2984577341
391 2990259502
392 8054610479

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00437

T2SSE

Type II/IV secretion system protein

96

369

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nlz-assembly1.cif.gz_E crystal structure of unliganded traffic atpase of the type iv secretion system of helicobacter pylori 0.8357 80 352
6bge-assembly1.cif.gz_A helicobacter pylori atpase, hp0525, in complex with 1g2 compound 0.8346 80 364
1nlz-assembly1.cif.gz_C crystal structure of unliganded traffic atpase of the type iv secretion system of helicobacter pylori 0.8048 81 364
2oap-assembly1.cif.gz_2 crystal structure of the archaeal secretion atpase gspe in complex with amp-pnp 0.7751 7 415
1nlz-assembly1.cif.gz_C crystal structure of unliganded traffic atpase of the type iv secretion system of helicobacter pylori 0.7681 81 364
ID Description Score Start End Superfamily
af_P9WMT3_116_327_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9329 170 378 3.40.50.300
af_Q58191_267_406_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9281 178 302 3.40.50.300
af_P9WMT3_116_327_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9035 170 378 3.40.50.300
4ii7D01 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.8934 78 171 3.30.450.370
1g6oA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8673 178 352 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A6J7FMW5-F1-model_v4 Unannotated protein 0.9782 185 414 GO:0016887
AF-A0A543PK05-F1-model_v4 Type II/IV secretion system protein 0.9701 170 417 GO:0016887
AF-A0A7V9ITG9-F1-model_v4 Flp pilus assembly complex ATPase component TadA 0.9682 263 414 GO:0016887
AF-A0A7W0U3P0-F1-model_v4 Flp pilus assembly complex ATPase component TadA 0.9674 263 414 GO:0016887
AF-A0A6L6F4F2-F1-model_v4 CpaF family protein 0.9638 188 395 GO:0016887

Map