F301178

General Info

Members Datasets Scaffolds Average Seq Length
196 138 392 191

Family's Representative Sequence

Representative Sequence 3300005444|Ga0070694_100786210|Ga0070694_1007862101
Length 216
Sequence LASQNRNVEIRRCRWATTELLAAYHDREWGVPVHEDRRLFEFLILEGAQAGLSWEIILKKRENYRAAFDNFDPRKIAKYDQRKVKSLLGDAGIIRNRLKINSTIQNAKAFLEIQKEFSSFDAYVWRFVNGRPIKRKRASVIQSHTSDSDALSRDLLQRGFKFVGSTICYSFMQAIGMVNDHEASCFRYQEVAREERLESALVPTARTSPRSKRSGR

Samples

Sample ID Description Type Environment
1 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
52 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
53 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
75 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
76 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
77 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
78 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
79 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
80 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
83 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
84 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
85 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
86 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
87 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
88 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
89 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
90 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
91 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
92 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
93 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
94 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
95 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
96 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
97 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
98 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
99 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
100 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
101 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
102 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
103 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
104 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
105 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
110 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
111 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
112 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
113 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
114 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
119 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
120 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
121 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
122 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
123 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
129 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
134 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
135 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
136 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
137 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
138 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.98
Metatranscriptomes 0.51
Isolates 0.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.02
Nodule 0
Rhizoplane 2.04
Rhizosphere 93.88
Stem 0
Stem Tuber 0
Unclassified 6.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070694_100786210 3300005444 Unclassified 779
2 rootH1_10368411 3300003323 Bacteria 1310
3 Ga0065704_10219969 3300005289 Bacteria 1077
4 Ga0065707_10140804 3300005295 Bacteria 1775
5 Ga0070690_100054074 3300005330 Bacteria 2570
6 Ga0070680_101055201 3300005336 Bacteria 702
7 Ga0070689_100057111 3300005340 Bacteria 3029
8 Ga0070668_100658814 3300005347 Bacteria 920
9 Ga0070669_100000769 3300005353 Bacteria 23303
10 Ga0070669_100162527 3300005353 Bacteria 1736
11 Ga0070673_100266453 3300005364 Bacteria 1498
12 Ga0070713_100039597 3300005436 Bacteria 3826
13 Ga0070713_100565656 3300005436 Bacteria 1078
14 Ga0070713_100973539 3300005436 Bacteria 818
15 Ga0070710_10002637 3300005437 Bacteria 8524
16 Ga0070710_10071812 3300005437 Bacteria 1997
17 Ga0070710_10108261 3300005437 Bacteria 1666
18 Ga0070711_100214964 3300005439 Bacteria 1491
19 Ga0070694_100141156 3300005444 Bacteria 1750
20 Ga0070694_100507583 3300005444 Bacteria 960
21 Ga0070708_100012632 3300005445 Bacteria 6897
22 Ga0070708_100057305 3300005445 Bacteria 3468
23 Ga0070708_100097897 3300005445 Bacteria 2682
24 Ga0070708_100527281 3300005445 Bacteria 1114
25 Ga0070662_100379030 3300005457 Bacteria 1164
26 Ga0068867_100830342 3300005459 Bacteria 826
27 Ga0070706_100017579 3300005467 Bacteria 6599
28 Ga0070706_100122120 3300005467 Bacteria 2428
29 Ga0070707_100000026 3300005468 Bacteria 124537
30 Ga0070707_100005301 3300005468 Bacteria 12069
31 Ga0070707_100092515 3300005468 Bacteria 2928
32 Ga0070707_100390285 3300005468 Bacteria 1352
33 Ga0070698_100116417 3300005471 Bacteria 2636
34 Ga0070698_100143544 3300005471 Bacteria 2338
35 Ga0070698_100211813 3300005471 Bacteria 1872
36 Ga0070699_100015581 3300005518 Bacteria 6531
37 Ga0070699_100182128 3300005518 Bacteria 1864
38 Ga0070699_100271652 3300005518 Bacteria 1517
39 Ga0070699_100393778 3300005518 Bacteria 1252
40 Ga0070679_100254371 3300005530 Bacteria 1712
41 Ga0070697_100010338 3300005536 Bacteria 7277
42 Ga0070697_100026238 3300005536 Bacteria 4652
43 Ga0070697_100079387 3300005536 Bacteria 2702
44 Ga0070697_100237874 3300005536 Bacteria 1554
45 Ga0070696_100640979 3300005546 Bacteria 860
46 Ga0070693_100193049 3300005547 Bacteria 1318
47 Ga0070704_100411527 3300005549 Bacteria 1156
48 Ga0070704_100441396 3300005549 Bacteria 1119
49 Ga0070704_100814052 3300005549 Bacteria 835
50 Ga0068855_100104417 3300005563 Bacteria 3259
51 Ga0068856_100000017 3300005614 Bacteria 154589
52 Ga0068856_100112627 3300005614 Bacteria 2719
53 Ga0068856_100606719 3300005614 Bacteria 1115
54 Ga0068861_100206402 3300005719 Bacteria 1652
55 Ga0068863_100074623 3300005841 Bacteria 3209
56 Ga0068862_100714026 3300005844 Bacteria 972
57 Ga0070717_10370011 3300006028 Bacteria 1284
58 Ga0070716_100030427 3300006173 Bacteria 2928
59 Ga0075433_10235815 3300006852 Bacteria 1624
60 Ga0075434_100019219 3300006871 Bacteria 6609
61 Ga0075436_100028839 3300006914 Bacteria 3818
62 Ga0099794_10226529 3300007265 Bacteria 961
63 Ga0105240_10220656 3300009093 Bacteria 2209
64 Ga0111539_11354792 3300009094 Unclassified 826
65 Ga0114129_10217138 3300009147 Unclassified 2582
66 Ga0105241_10212427 3300009174 Unclassified 1622
67 Ga0105237_10819735 3300009545 Unclassified 937
68 Ga0105238_10010719 3300009551 Bacteria 9205
69 Ga0105239_10015533 3300010375 Bacteria 8433
70 Ga0105239_10018057 3300010375 Bacteria 7803
71 Ga0105246_10629817 3300011119 Bacteria 931
72 Ga0157378_10084689 3300013297 Bacteria 2871
73 Ga0157378_10281995 3300013297 Unclassified 1602
74 Ga0157378_11095272 3300013297 Bacteria 833
75 Ga0163162_10024158 3300013306 Bacteria 5998
76 Ga0157372_10165123 3300013307 Bacteria 2560
77 Ga0157372_10935284 3300013307 Bacteria 1005
78 Ga0157375_10216743 3300013308 Bacteria 2072
79 Ga0157380_10275646 3300014326 Unclassified 1536
80 Ga0157379_10067450 3300014968 Bacteria 3198
81 Ga0213875_10280332 3300021388 Bacteria 787
82 Ga0228598_1030304 3300024227 Bacteria 1064
83 Ga0207692_10055177 3300025898 Bacteria 2033
84 Ga0207692_10067818 3300025898 Bacteria 1869
85 Ga0207684_10001572 3300025910 Bacteria 24352
86 Ga0207684_10103191 3300025910 Bacteria 2438
87 Ga0207684_10137604 3300025910 Bacteria 2098
88 Ga0207684_10146103 3300025910 Bacteria 2034
89 Ga0207654_10135953 3300025911 Unclassified 1561
90 Ga0207695_10216627 3300025913 Bacteria 1823
91 Ga0207695_10284768 3300025913 Bacteria 1546
92 Ga0207695_10762048 3300025913 Unclassified 848
93 Ga0207663_10571046 3300025916 Bacteria 886
94 Ga0207646_10002602 3300025922 Bacteria 21242
95 Ga0207646_10007868 3300025922 Bacteria 10764
96 Ga0207646_10043134 3300025922 Bacteria 4052
97 Ga0207646_10196518 3300025922 Bacteria 1822
98 Ga0207646_10280767 3300025922 Bacteria 1505
99 Ga0207681_10002773 3300025923 Bacteria 11083
100 Ga0207681_10096098 3300025923 Bacteria 2127
101 Ga0207694_10017112 3300025924 Bacteria 5477
102 Ga0207650_10001364 3300025925 Bacteria 17619
103 Ga0207700_10747215 3300025928 Bacteria 874
104 Ga0207709_10031142 3300025935 Bacteria 3112
105 Ga0207670_10040178 3300025936 Bacteria 3069
106 Ga0207669_10198759 3300025937 Bacteria 1453
107 Ga0207665_10047312 3300025939 Bacteria 2884
108 Ga0207665_10160720 3300025939 Bacteria 1616
109 Ga0207665_10368658 3300025939 Bacteria 1087
110 Ga0207667_10108076 3300025949 Bacteria 2870
111 Ga0207651_10853506 3300025960 Bacteria 809
112 Ga0207708_10186362 3300026075 Bacteria 1649
113 Ga0207702_10000781 3300026078 Bacteria 33694
114 Ga0207702_10198682 3300026078 Bacteria 1857
115 Ga0207641_10487487 3300026088 Bacteria 1195
116 Ga0207675_100144768 3300026118 Bacteria 2259
117 Ga0209588_1018910 3300027671 Bacteria 2147
118 Ga0265326_10000286 3300028558 Bacteria 22881
119 Ga0265319_1000166 3300028563 Bacteria 50092
120 Ga0265334_10103211 3300028573 Bacteria 1030
121 Ga0265318_10005609 3300028577 Bacteria 5878
122 Ga0265323_10000366 3300028653 Bacteria 26000
123 Ga0265322_10000146 3300028654 Bacteria 32989
124 Ga0265336_10063842 3300028666 Bacteria 1103
125 Ga0265338_10015652 3300028800 Bacteria 8310
126 Ga0265338_10463534 3300028800 Bacteria 896
127 Ga0265324_10004556 3300029957 Bacteria 6206
128 Ga0265762_1050965 3300030760 Bacteria 831
129 Ga0265332_10001061 3300031238 Bacteria 16090
130 Ga0265332_10076438 3300031238 Bacteria 1423
131 Ga0265328_10006665 3300031239 Bacteria 4862
132 Ga0265320_10001443 3300031240 Bacteria 17316
133 Ga0265325_10041729 3300031241 Bacteria 2403
134 Ga0265329_10000080 3300031242 Bacteria 44303
135 Ga0265340_10027376 3300031247 Bacteria 2874
136 Ga0265340_10130109 3300031247 Bacteria 1155
137 Ga0265339_10014351 3300031249 Bacteria 4775
138 Ga0265339_10081214 3300031249 Bacteria 1713
139 Ga0265331_10004186 3300031250 Bacteria 9042
140 Ga0265327_10037770 3300031251 Bacteria 2640
141 Ga0265316_10006366 3300031344 Bacteria 11291
142 Ga0307408_100586661 3300031548 Bacteria 988
143 Ga0265313_10031081 3300031595 Bacteria 2740
144 Ga0265314_10003319 3300031711 Bacteria 15688
145 Ga0265342_10001330 3300031712 Bacteria 23197
146 Ga0265342_10078230 3300031712 Bacteria 1914
147 Ga0307412_10544511 3300031911 Bacteria 974
148 Ga0307411_10127276 3300032005 Bacteria 1855
149 Ga0307507_10031238 3300033179 Bacteria 5594
150 Ga0373923_0073964 3300035111 Bacteria 1468
151 Ga0373957_0264977 3300035120 Bacteria 725
152 Ga0373924_0102093 3300035410 Bacteria 1234
153 Ga0373927_0092733 3300035695 Bacteria 1962
154 Ga0373927_0154974 3300035695 Bacteria 1500
155 Ga0373927_0467927 3300035695 Unclassified 833
156 Ga0373937_0073377 3300036401 Bacteria 3157
157 Ga0373937_0092774 3300036401 Bacteria 2799
158 Ga0373937_0223477 3300036401 Bacteria 1773
159 Ga0373937_0293596 3300036401 Bacteria 1536
160 Ga0395898_0555178 3300037466 Bacteria 1091
161 Ga0436364_1446452 3300037853 Unclassified 1497
162 Ga0395901_0334629 3300038443 Bacteria 1565
163 Ga0395901_1346897 3300038443 Bacteria 674
164 Ga0400483_094683 3300039062 Bacteria 10942
165 Ga0436360_0821073 3300039438 Unclassified 3179
166 Ga0451577_0076194 3300042876 Bacteria 2991
167 Ga0466961_0062544 3300044693 Bacteria 2366
168 Ga0453684_0001509 3300044712 Bacteria 65391
169 Ga0466959_0220936 3300045049 Bacteria 1314
170 Ga0451576_0058137 3300045051 Bacteria 4041
171 Ga0466958_0121045 3300045836 Bacteria 1638
172 Ga0466967_0182954 3300045976 Bacteria 1978
173 Ga0495580_0004869 3300046472 Bacteria 11229
174 Ga0495580_0045863 3300046472 Bacteria 3103
175 Ga0495580_0052820 3300046472 Bacteria 2869
176 Ga0495582_0187703 3300046473 Bacteria 1179
177 Ga0495665_0245412 3300046531 Bacteria 922
178 Ga0495657_0010484 3300046675 Bacteria 6973
179 Ga0495658_0340845 3300046683 Bacteria 952
180 Ga0495602_0014711 3300048088 Bacteria 7936
181 Ga0496104_0278627 3300048907 Bacteria 1585
182 Ga0496105_1158312 3300048908 Bacteria 571
183 Ga0496111_0002208 3300048914 Bacteria 11674
184 Ga0496112_0166982 3300048915 Bacteria 2167
185 Ga0501083_0040317 3300049744 Bacteria 3170
186 Ga0501083_0559304 3300049744 Bacteria 744
187 Ga0501035_0343719 3300049822 Bacteria 1250
188 nmdc:mga05p37_259502_c1 3300050507 Bacteria 2080
189 nmdc:mga0qj67_38180_c1 3300050509 Bacteria 3767
190 nmdc:mga0n895_36121_c1 3300050512 Bacteria 4770
191 nmdc:mga08x19_151155_c1 3300050514 Bacteria 1572
192 nmdc:mga0a205_254447_c1 3300050515 Bacteria 1635
193 Ga0500641_0022147 3300053096 Bacteria 2430
194 Ga0500652_097373 3300053131 Unclassified 1229
195 Ga0590071_005153 3300059421 Bacteria 3153
196 2989396703 2989392574 Bacteria 4554005
197 Ga0070694_100786210
198 rootH1_10368411
199 Ga0065704_10219969
200 Ga0065707_10140804
201 Ga0070690_100054074
202 Ga0070680_101055201
203 Ga0070689_100057111
204 Ga0070668_100658814
205 Ga0070669_100000769
206 Ga0070669_100162527
207 Ga0070673_100266453
208 Ga0070713_100039597
209 Ga0070713_100565656
210 Ga0070713_100973539
211 Ga0070710_10002637
212 Ga0070710_10071812
213 Ga0070710_10108261
214 Ga0070711_100214964
215 Ga0070694_100141156
216 Ga0070694_100507583
217 Ga0070708_100012632
218 Ga0070708_100057305
219 Ga0070708_100097897
220 Ga0070708_100527281
221 Ga0070662_100379030
222 Ga0068867_100830342
223 Ga0070706_100017579
224 Ga0070706_100122120
225 Ga0070707_100000026
226 Ga0070707_100005301
227 Ga0070707_100092515
228 Ga0070707_100390285
229 Ga0070698_100116417
230 Ga0070698_100143544
231 Ga0070698_100211813
232 Ga0070699_100015581
233 Ga0070699_100182128
234 Ga0070699_100271652
235 Ga0070699_100393778
236 Ga0070679_100254371
237 Ga0070697_100010338
238 Ga0070697_100026238
239 Ga0070697_100079387
240 Ga0070697_100237874
241 Ga0070696_100640979
242 Ga0070693_100193049
243 Ga0070704_100411527
244 Ga0070704_100441396
245 Ga0070704_100814052
246 Ga0068855_100104417
247 Ga0068856_100000017
248 Ga0068856_100112627
249 Ga0068856_100606719
250 Ga0068861_100206402
251 Ga0068863_100074623
252 Ga0068862_100714026
253 Ga0070717_10370011
254 Ga0070716_100030427
255 Ga0075433_10235815
256 Ga0075434_100019219
257 Ga0075436_100028839
258 Ga0099794_10226529
259 Ga0105240_10220656
260 Ga0111539_11354792
261 Ga0114129_10217138
262 Ga0105241_10212427
263 Ga0105237_10819735
264 Ga0105238_10010719
265 Ga0105239_10015533
266 Ga0105239_10018057
267 Ga0105246_10629817
268 Ga0157378_10084689
269 Ga0157378_10281995
270 Ga0157378_11095272
271 Ga0163162_10024158
272 Ga0157372_10165123
273 Ga0157372_10935284
274 Ga0157375_10216743
275 Ga0157380_10275646
276 Ga0157379_10067450
277 Ga0213875_10280332
278 Ga0228598_1030304
279 Ga0207692_10055177
280 Ga0207692_10067818
281 Ga0207684_10001572
282 Ga0207684_10103191
283 Ga0207684_10137604
284 Ga0207684_10146103
285 Ga0207654_10135953
286 Ga0207695_10216627
287 Ga0207695_10284768
288 Ga0207695_10762048
289 Ga0207663_10571046
290 Ga0207646_10002602
291 Ga0207646_10007868
292 Ga0207646_10043134
293 Ga0207646_10196518
294 Ga0207646_10280767
295 Ga0207681_10002773
296 Ga0207681_10096098
297 Ga0207694_10017112
298 Ga0207650_10001364
299 Ga0207700_10747215
300 Ga0207709_10031142
301 Ga0207670_10040178
302 Ga0207669_10198759
303 Ga0207665_10047312
304 Ga0207665_10160720
305 Ga0207665_10368658
306 Ga0207667_10108076
307 Ga0207651_10853506
308 Ga0207708_10186362
309 Ga0207702_10000781
310 Ga0207702_10198682
311 Ga0207641_10487487
312 Ga0207675_100144768
313 Ga0209588_1018910
314 Ga0265326_10000286
315 Ga0265319_1000166
316 Ga0265334_10103211
317 Ga0265318_10005609
318 Ga0265323_10000366
319 Ga0265322_10000146
320 Ga0265336_10063842
321 Ga0265338_10015652
322 Ga0265338_10463534
323 Ga0265324_10004556
324 Ga0265762_1050965
325 Ga0265332_10001061
326 Ga0265332_10076438
327 Ga0265328_10006665
328 Ga0265320_10001443
329 Ga0265325_10041729
330 Ga0265329_10000080
331 Ga0265340_10027376
332 Ga0265340_10130109
333 Ga0265339_10014351
334 Ga0265339_10081214
335 Ga0265331_10004186
336 Ga0265327_10037770
337 Ga0265316_10006366
338 Ga0307408_100586661
339 Ga0265313_10031081
340 Ga0265314_10003319
341 Ga0265342_10001330
342 Ga0265342_10078230
343 Ga0307412_10544511
344 Ga0307411_10127276
345 Ga0307507_10031238
346 Ga0373923_0073964
347 Ga0373957_0264977
348 Ga0373924_0102093
349 Ga0373927_0092733
350 Ga0373927_0154974
351 Ga0373927_0467927
352 Ga0373937_0073377
353 Ga0373937_0092774
354 Ga0373937_0223477
355 Ga0373937_0293596
356 Ga0395898_0555178
357 Ga0436364_1446452
358 Ga0395901_0334629
359 Ga0395901_1346897
360 Ga0400483_094683
361 Ga0436360_0821073
362 Ga0451577_0076194
363 Ga0466961_0062544
364 Ga0453684_0001509
365 Ga0466959_0220936
366 Ga0451576_0058137
367 Ga0466958_0121045
368 Ga0466967_0182954
369 Ga0495580_0004869
370 Ga0495580_0045863
371 Ga0495580_0052820
372 Ga0495582_0187703
373 Ga0495665_0245412
374 Ga0495657_0010484
375 Ga0495658_0340845
376 Ga0495602_0014711
377 Ga0496104_0278627
378 Ga0496105_1158312
379 Ga0496111_0002208
380 Ga0496112_0166982
381 Ga0501083_0040317
382 Ga0501083_0559304
383 Ga0501035_0343719
384 nmdc:mga05p37_259502_c1
385 nmdc:mga0qj67_38180_c1
386 nmdc:mga0n895_36121_c1
387 nmdc:mga08x19_151155_c1
388 nmdc:mga0a205_254447_c1
389 Ga0500641_0022147
390 Ga0500652_097373
391 Ga0590071_005153
392 2989396703

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03352

Adenine_glyco

Methyladenine glycosylase

15

188

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ofk-assembly1.cif.gz_A crystal structure of 3-methyladenine dna glycosylase i (tag) 0.9787 7 184
4ai5-assembly3.cif.gz_C crystal structure of y16f of 3-methyladenine dna glycosylase i (tag) in complex with 3-methyladenine 0.975 8 184
4aia-assembly4.cif.gz_D the structural basis of 3-methyladenine recognition by 3- methyladenine dna glycosylase i (tag) from staphylococcus aureus 0.9677 6 184
4ai4-assembly1.cif.gz_A crystal structure of e38q mutant of 3-methyladenine dna glycosylase i from staphylococcus aureus 0.962 8 184
2ofk-assembly1.cif.gz_A crystal structure of 3-methyladenine dna glycosylase i (tag) 0.9523 7 184
ID Description Score Start End Superfamily
af_P05100_1_187_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.982 6 183 1.10.340.30
af_Q2FXR7_1_186_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9815 13 184 1.10.340.30
af_C6TKE8_117_301_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9753 6 186 1.10.340.30
af_C6TKE8_117_301_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9495 6 186 1.10.340.30
af_A0A1D6I4F4_25_202_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9494 12 185 1.10.340.30
ID Description Score Start End GO Terms
AF-A0A1H1N6L2-F1-model_v4 DNA-3-methyladenine glycosylase I 1 8 188 GO:0006284
GO:0008725
GO:0046872
AF-A0A1F9VRF3-F1-model_v4 DNA-3-methyladenine glycosylase 1 18 188 GO:0006284
GO:0008725
GO:0046872
AF-A0A7T9GAR2-F1-model_v4 deleted 0.9998 6 189
AF-A0A496UUB5-F1-model_v4 DNA-3-methyladenine glycosylase I 0.9993 23 189 GO:0006284
GO:0008725
GO:0046872
AF-A0A534XCK2-F1-model_v4 DNA-3-methyladenine glycosylase I 0.999 24 188 GO:0006284
GO:0008725
GO:0046872

Map