F300983
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 196 | 152 | 142 | 689 |
Family's Representative Sequence
| Representative Sequence | 3300005289|Ga0065704_10074250|Ga0065704_100742504 |
| Length | 745 |
| Sequence | MSHQNLKVALIGNPNTGKTSVFNQLTGLKQQVGNYPGITVEKKIGYSKLTDNLKATILDLPGTYSLNASSIDENVVIELLLNKNDSNYPDVAVVVTEVENLKRNLLLFTQIKDLEIPTILAINMSDRMNYKGIELNIPYLEEQLKTKIALISSRKNIGIDNLKKLIADYKNISTEPCLNASSIDIDYFDKLRHAFPKELLYKLWLVITQDVNFGHLQRNEIAEKSFAKSNSELKKMQQKETIKRYQFINDVLKIGYKIDTTKAKGIRAKLDKILVHKVFGYVIFFAILMLIFQSVFSWSSIPMDFIDESFAKLGTFAKTNLPAGVLTDLISEGIIPGVGGVVIFIPQIAFLFLFISVLEESGYMSRVVFLMDKIMRRFGLSGKSVVPLISGTACAIPAIMAARNIENWKERLITILITPFTTCSARLPVYAILISLIIPEKRILGFLNLQGLTLMALYLLGFGMAIFSAYILNKILKIKSKSYFVIEMPNYRLPLFKNVAINVLEKTKAFVFGAGKIILAISIILWFLGSNGSSDEFANAETIVKKRIEQQGLTRFNQHYIDNKLSEHYVALNDSVTKNIYKISTQDIADSLTHKKQELFIKLENQEISSYKLEKSYIGVLGKTIEPVIRPLGYDWKIGIAVITSFAAREVFIGTLASIYSVDSEEEVTIKNRMEAEINPVNGKKVFNFATGISLLLFYAFAMQCISTLAITKKETNSWKWPIIQLVFMSALAYSVSLVVYQILK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2513020052 | Flavobacterium sp. CF136 | Isolate | Rhizosphere |
| 2 | 2519899754 | Flavobacterium sp. F52 | Isolate | Rhizosphere |
| 3 | 2585427687 | Pedobacter borealis DSM 19626 | Isolate | Rhizosphere |
| 4 | 2643221600 | Flavobacterium sp. Root186 | Isolate | Unclassified |
| 5 | 2643221667 | Flavobacterium sp. Root420 | Isolate | Unclassified |
| 6 | 2643221716 | Flavobacterium sp. Root901 | Isolate | Unclassified |
| 7 | 2643221725 | Flavobacterium sp. Root935 | Isolate | Unclassified |
| 8 | 2721755487 | Sphingobacterium sp. B29 | Isolate | Rhizosphere |
| 9 | 2738541279 | Flavobacterium sp. GV069 | Isolate | Unclassified |
| 10 | 2738541285 | Flavobacterium sp. GV030 | Isolate | Unclassified |
| 11 | 2738541302 | Pedobacter sp. CF074 | Isolate | Unclassified |
| 12 | 2738543007 | Flavobacterium sp. GV063 | Isolate | Unclassified |
| 13 | 2739367651 | Pedobacter sp. OK291 | Isolate | Unclassified |
| 14 | 2739367656 | Pedobacter sp. CF523 | Isolate | Unclassified |
| 15 | 2739367663 | Pedobacter sp. YR510 | Isolate | Unclassified |
| 16 | 2739367857 | Flavobacterium sp. GV029 | Isolate | Unclassified |
| 17 | 2739367858 | Flavobacterium sp. GV028 | Isolate | Unclassified |
| 18 | 2802428842 | Flavobacterium sp. S87F.05.LMB.W.Kidney.N | Isolate | Unclassified |
| 19 | 2816332280 | Flavobacterium johnsoniae GSE09 | Isolate | Unclassified |
| 20 | 2818991437 | Pedobacter terrae 518 | Isolate | Unclassified |
| 21 | 2833640130 | Mariniflexile sp. TRM1-10 | Isolate | Rhizosphere |
| 22 | 2849281842 | Pedobacter sp. AK013 | Isolate | Rhizosphere |
| 23 | 2857613821 | Flavobacterium sp. R-72247 | Isolate | Unclassified |
| 24 | 2857618242 | Flavobacterium sp. R-74482 | Isolate | Unclassified |
| 25 | 2881247448 | Flavobacterium beibuense RSKm HC5 | Isolate | Rhizosphere |
| 26 | 2881359912 | Flavobacterium ustbae T13 | Isolate | Rhizosphere |
| 27 | 2884634485 | Algoriphagus kandeliae XY-J91 | Isolate | Unclassified |
| 28 | 2890737413 | Parapedobacter sp. SGR-10 | Isolate | Rhizosphere |
| 29 | 2890804823 | Fluviicola sp. SGL-29 | Isolate | Rhizosphere |
| 30 | 2896317667 | Sphingobacterium sp. SGR-19 | Isolate | Rhizosphere |
| 31 | 2896344016 | Sphingobacterium sp. SGL-16 | Isolate | Rhizosphere |
| 32 | 2898713307 | Sphingobacterium sp. SGG-5 | Isolate | Rhizosphere |
| 33 | 2902048731 | Pedobacter ureilyticus THG-T11 | Isolate | Rhizosphere |
| 34 | 2903895155 | Flavobacterium sp. HBTb2-11-1 | Isolate | Rhizosphere |
| 35 | 2904419702 | Flavobacterium sp. 1355 | Isolate | Rhizosphere |
| 36 | 2904445276 | Pedobacter terrae 1734 | Isolate | Rhizosphere |
| 37 | 2904555929 | Flavobacterium sp. 1750 | Isolate | Rhizosphere |
| 38 | 2904780799 | Sphingobacterium sp. 1304 | Isolate | Rhizosphere |
| 39 | 2919177583 | Sphingobacterium sp. 2149 | Isolate | Rhizosphere |
| 40 | 2919191525 | Flavobacterium sp. 2755 | Isolate | Rhizosphere |
| 41 | 2919509842 | Flavobacterium arsenatis 3773 | Isolate | Unclassified |
| 42 | 2919683626 | Flavobacterium piscis 4129 | Isolate | Unclassified |
| 43 | 2919692658 | Algoriphagus sp. 4150 | Isolate | Rhizosphere |
| 44 | 2929150217 | Flavobacterium sp. R-74510 Hybrid assembly | Isolate | Unclassified |
| 45 | 2958458903 | Flavobacterium anhuiense RCM74 | Isolate | Rhizosphere |
| 46 | 2958512119 | Flavobacterium sp. Sd200 | Isolate | Rhizosphere |
| 47 | 2965320100 | Flavobacterium agri MAH-1 | Isolate | Rhizosphere |
| 48 | 2977268062 | Flavobacterium sp. SORGH_AS 622 | Isolate | Unclassified |
| 49 | 3003233435 | Sphingobacterium shayense CrR18 | Isolate | Unclassified |
| 50 | 3300002773 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS | Metagenome | Endosphere |
| 51 | 3300002774 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA | Metagenome | Endosphere |
| 52 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 53 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 54 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 55 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 56 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 57 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 58 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 59 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 60 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 61 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 62 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 63 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 64 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 65 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 66 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 67 | 3300006942 | Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW | Metagenome | Nodule |
| 68 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 69 | 3300006948 | Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 | Metagenome | Nodule |
| 70 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 71 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 72 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 74 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 75 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 76 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 77 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 78 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 79 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 80 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 81 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 82 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 83 | 3300015682 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 | Metagenome | Rhizosphere |
| 84 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 85 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 86 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 87 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 88 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 89 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 90 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 91 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 96 | 3300027361 | Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) | Metagenome | Nodule |
| 97 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 99 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 100 | 3300030731 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 | Metagenome | Rhizosphere |
| 101 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 102 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 103 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 104 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 105 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 106 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 107 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 108 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 109 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 110 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 111 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 112 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 113 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 114 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 115 | 3300041407 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 | Metagenome | Rhizosphere |
| 116 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 117 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 118 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 119 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 120 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 121 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 127 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 128 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 129 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 130 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 131 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 132 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 133 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 134 | 3300049539 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 135 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 136 | 3300049663 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought | Metagenome | Rhizosphere |
| 137 | 3300049670 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought | Metagenome | Rhizosphere |
| 138 | 3300049671 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought | Metagenome | Rhizosphere |
| 139 | 3300049679 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought | Metagenome | Rhizosphere |
| 140 | 3300049761 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control | Metagenome | Rhizosphere |
| 141 | 3300049763 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control | Metagenome | Rhizosphere |
| 142 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 143 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 144 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 145 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 146 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 147 | 8036736890 | Flavobacterium dauae TCH3-2 | Isolate | Rhizosphere |
| 148 | 8054307821 | Flavobacterium soyae SCIV07 | Isolate | Rhizosphere |
| 149 | 8055419101 | Flavobacterium tyrosinilyticum KCTC 42726 | Isolate | Rhizosphere |
| 150 | 8055588893 | Parapedobacter lycopersici KACC 18788 | Isolate | Rhizosphere |
| 151 | 8055592153 | Flavobacterium panacis DCY106 | Isolate | Rhizosphere |
| 152 | 8056440228 | Flavobacterium hibisci THG-HG1.4 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 71.43 |
| Metatranscriptomes | 0.51 |
| Isolates | 28.06 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 9.69 |
| Nodule | 2.55 |
| Rhizoplane | 0.51 |
| Rhizosphere | 64.8 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 22.45 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25152J39213_1000203 | 3300002773 | Bacteria | 39884 |
| 2 | JGI25150J39212_1000025 | 3300002774 | Bacteria | 123597 |
| 3 | JGI25151J46595_10000089 | 3300003187 | Bacteria | 123597 |
| 4 | JGI25153J46596_10000079 | 3300003215 | Bacteria | 113263 |
| 5 | rootH1_10024721 | 3300003316 | Bacteria | 19323 |
| 6 | rootL2_10115235 | 3300003322 | Bacteria | 26947 |
| 7 | rootH1_10000027 | 3300003316 | Bacteria | 6016 |
| 8 | rootH1_10000027 | 3300003323 | Bacteria | 5996 |
| 9 | rootH1_10020954 | 3300003323 | Bacteria | 5592 |
| 10 | rootH1_10025005 | 3300003323 | Bacteria | 27131 |
| 11 | rootH1_10113739 | 3300003323 | Bacteria | 5956 |
| 12 | Ga0055536_1000010 | 3300003781 | Bacteria | 304614 |
| 13 | Ga0055530_10004204 | 3300003791 | Bacteria | 7570 |
| 14 | Ga0065714_10064503 | 3300005288 | Bacteria | 46875 |
| 15 | Ga0065714_10071295 | 3300005288 | Bacteria | 3614 |
| 16 | Ga0065704_10074250 | 3300005289 | Bacteria | 6422 |
| 17 | Ga0065715_10089218 | 3300005293 | Bacteria | 12361 |
| 18 | Ga0065715_10098454 | 3300005293 | Bacteria | 3545 |
| 19 | Ga0065715_10117106 | 3300005293 | Bacteria | 2352 |
| 20 | Ga0070682_100038324 | 3300005337 | Bacteria | 2940 |
| 21 | Ga0070687_100030348 | 3300005343 | Bacteria | 2642 |
| 22 | Ga0070662_100008846 | 3300005457 | Bacteria | 6562 |
| 23 | Ga0070686_100000215 | 3300005544 | Bacteria | 40190 |
| 24 | Ga0075428_100012024 | 3300006844 | Bacteria | 9627 |
| 25 | Ga0099824_1007872 | 3300006942 | Bacteria | 13879 |
| 26 | Ga0079104_1000146 | 3300006946 | Bacteria | 99148 |
| 27 | Ga0099826_10001850 | 3300006948 | Bacteria | 13169 |
| 28 | Ga0105244_10000112 | 3300009036 | Bacteria | 84783 |
| 29 | Ga0105250_10006701 | 3300009092 | Bacteria | 5006 |
| 30 | Ga0111539_10030418 | 3300009094 | Bacteria | 6562 |
| 31 | Ga0105243_10000002 | 3300009148 | Bacteria | 856281 |
| 32 | Ga0157373_10000023 | 3300013100 | Bacteria | 164200 |
| 33 | Ga0157371_10000496 | 3300013102 | Bacteria | 47702 |
| 34 | Ga0157371_10006421 | 3300013102 | Bacteria | 9708 |
| 35 | Ga0157370_10001180 | 3300013104 | Bacteria | 32585 |
| 36 | Ga0157370_10001277 | 3300013104 | Bacteria | 31514 |
| 37 | Ga0157370_10005592 | 3300013104 | Bacteria | 14077 |
| 38 | Ga0157370_10011255 | 3300013104 | Bacteria | 9379 |
| 39 | Ga0157370_10011873 | 3300013104 | Bacteria | 9085 |
| 40 | Ga0157370_10027682 | 3300013104 | Bacteria | 5588 |
| 41 | Ga0157369_10000414 | 3300013105 | Bacteria | 56570 |
| 42 | Ga0157369_10006907 | 3300013105 | Bacteria | 13099 |
| 43 | Ga0163162_10006399 | 3300013306 | Bacteria | 11402 |
| 44 | Ga0163162_10029186 | 3300013306 | Bacteria | 5457 |
| 45 | Ga0157375_10036026 | 3300013308 | Bacteria | 4729 |
| 46 | Ga0182008_10007636 | 3300014497 | Bacteria | 5960 |
| 47 | Ga0182006_1000253 | 3300015261 | Bacteria | 49431 |
| 48 | Ga0182006_1000929 | 3300015261 | Bacteria | 19540 |
| 49 | Ga0182006_1004286 | 3300015261 | Bacteria | 7058 |
| 50 | Ga0182006_1009664 | 3300015261 | Bacteria | 4316 |
| 51 | Ga0182007_10000009 | 3300015262 | Bacteria | 316298 |
| 52 | Ga0183373_1013 | 3300015682 | Bacteria | 112340 |
| 53 | Ga0163161_10000449 | 3300017792 | Bacteria | 34233 |
| 54 | Ga0163161_10000475 | 3300017792 | Bacteria | 33301 |
| 55 | Ga0163161_10003317 | 3300017792 | Bacteria | 11289 |
| 56 | Ga0163161_10032464 | 3300017792 | Bacteria | 3728 |
| 57 | Ga0207425_1000008 | 3300025245 | Bacteria | 618024 |
| 58 | Ga0209129_1000042 | 3300025258 | Bacteria | 305537 |
| 59 | Ga0209676_1000009 | 3300025292 | Bacteria | 981719 |
| 60 | Ga0209025_1000020 | 3300025294 | Bacteria | 618024 |
| 61 | Ga0209758_1000022 | 3300025297 | Bacteria | 618024 |
| 62 | Ga0209050_1000103 | 3300025298 | Bacteria | 229225 |
| 63 | Ga0209050_1001156 | 3300025298 | Bacteria | 31568 |
| 64 | Ga0207655_1000003 | 3300025728 | Bacteria | 1081376 |
| 65 | Ga0207662_10033568 | 3300025918 | Bacteria | 2992 |
| 66 | Ga0207706_10003462 | 3300025933 | Bacteria | 15068 |
| 67 | Ga0207709_10000003 | 3300025935 | Bacteria | 1050072 |
| 68 | Ga0209281_1000045 | 3300027111 | Bacteria | 328124 |
| 69 | Ga0209489_108520 | 3300027361 | Bacteria | 13879 |
| 70 | Ga0209974_10018110 | 3300027876 | Bacteria | 2336 |
| 71 | Ga0207428_10050605 | 3300027907 | Bacteria | 3323 |
| 72 | Ga0307515_10000012 | 3300028794 | Bacteria | 582232 |
| 73 | Ga0316177_1043701 | 3300030731 | Bacteria | 5311 |
| 74 | Ga0307509_10016710 | 3300031507 | Bacteria | 8479 |
| 75 | Ga0307408_100009278 | 3300031548 | Bacteria | 6486 |
| 76 | Ga0307405_10000001 | 3300031731 | Bacteria | 1731270 |
| 77 | Ga0307405_10000036 | 3300031731 | Bacteria | 91687 |
| 78 | Ga0307413_10000012 | 3300031824 | Bacteria | 51136 |
| 79 | Ga0307406_10000062 | 3300031901 | Bacteria | 60112 |
| 80 | Ga0307407_10000006 | 3300031903 | Bacteria | 218714 |
| 81 | Ga0307407_10003705 | 3300031903 | Bacteria | 6334 |
| 82 | Ga0307409_100024424 | 3300031995 | Bacteria | 4215 |
| 83 | Ga0307416_100000058 | 3300032002 | Bacteria | 103674 |
| 84 | Ga0307416_100000604 | 3300032002 | Bacteria | 18489 |
| 85 | Ga0307416_100007847 | 3300032002 | Bacteria | 6824 |
| 86 | Ga0307414_10000027 | 3300032004 | Bacteria | 192277 |
| 87 | Ga0307414_10000824 | 3300032004 | Bacteria | 15843 |
| 88 | Ga0307414_10032976 | 3300032004 | Bacteria | 3417 |
| 89 | Ga0307414_10034784 | 3300032004 | Bacteria | 3345 |
| 90 | Ga0307411_10000003 | 3300032005 | Bacteria | 477556 |
| 91 | Ga0307411_10001259 | 3300032005 | Bacteria | 10116 |
| 92 | Ga0307411_10009593 | 3300032005 | Bacteria | 5103 |
| 93 | Ga0307510_10002290 | 3300033180 | Bacteria | 21613 |
| 94 | Ga0373927_0010368 | 3300035695 | Bacteria | 6219 |
| 95 | Ga0395899_0051270 | 3300037312 | Bacteria | 3063 |
| 96 | Ga0395905_0000051 | 3300037471 | Bacteria | 223416 |
| 97 | Ga0439447_000028 | 3300041407 | Bacteria | 50373 |
| 98 | Ga0439466_0000467 | 3300041411 | Bacteria | 15400 |
| 99 | Ga0439466_0019376 | 3300041411 | Bacteria | 2434 |
| 100 | Ga0451577_0001423 | 3300042876 | Bacteria | 31912 |
| 101 | Ga0451577_0002147 | 3300042876 | Bacteria | 24148 |
| 102 | Ga0451577_0013679 | 3300042876 | Bacteria | 7585 |
| 103 | Ga0453683_0021245 | 3300044673 | Bacteria | 4145 |
| 104 | Ga0453684_0001264 | 3300044712 | Bacteria | 76025 |
| 105 | Ga0453684_0132735 | 3300044712 | Bacteria | 2986 |
| 106 | Ga0451576_0003692 | 3300045051 | Bacteria | 20735 |
| 107 | Ga0451576_0008086 | 3300045051 | Bacteria | 12400 |
| 108 | Ga0495638_0000004 | 3300046460 | Bacteria | 700795 |
| 109 | Ga0495606_0018601 | 3300046507 | Bacteria | 5201 |
| 110 | Ga0495610_0000680 | 3300046512 | Bacteria | 32861 |
| 111 | Ga0495610_0001782 | 3300046512 | Bacteria | 18811 |
| 112 | Ga0495643_0000904 | 3300046522 | Bacteria | 31316 |
| 113 | Ga0495625_0058463 | 3300046660 | Bacteria | 2740 |
| 114 | Ga0496115_0030066 | 3300048918 | Bacteria | 4270 |
| 115 | Ga0496116_0001214 | 3300048919 | Bacteria | 30053 |
| 116 | Ga0496116_0003323 | 3300048919 | Bacteria | 15985 |
| 117 | Ga0496117_0004376 | 3300048920 | Bacteria | 15662 |
| 118 | Ga0496118_0034813 | 3300048921 | Bacteria | 4102 |
| 119 | Ga0496121_0020774 | 3300048924 | Bacteria | 6474 |
| 120 | Ga0496124_0071728 | 3300048927 | Bacteria | 2870 |
| 121 | Ga0496125_0000098 | 3300048928 | Bacteria | 204522 |
| 122 | Ga0496125_0000189 | 3300048928 | Bacteria | 133541 |
| 123 | Ga0496126_0006561 | 3300048929 | Bacteria | 12961 |
| 124 | Ga0496126_0010401 | 3300048929 | Bacteria | 9757 |
| 125 | Ga0496126_0076435 | 3300048929 | Bacteria | 2970 |
| 126 | Ga0501323_001536 | 3300049539 | Bacteria | 2077 |
| 127 | Ga0501034_0005455 | 3300049571 | Bacteria | 13891 |
| 128 | Ga0501223_000550 | 3300049663 | Bacteria | 9049 |
| 129 | Ga0501236_000105 | 3300049670 | Bacteria | 7796 |
| 130 | Ga0501238_000378 | 3300049671 | Bacteria | 5511 |
| 131 | Ga0501249_000013 | 3300049679 | Bacteria | 138361 |
| 132 | Ga0501249_000788 | 3300049679 | Bacteria | 7089 |
| 133 | Ga0501249_008809 | 3300049679 | Bacteria | 2096 |
| 134 | Ga0501264_000155 | 3300049761 | Bacteria | 10971 |
| 135 | Ga0501266_000003 | 3300049763 | Bacteria | 388836 |
| 136 | Ga0501035_0010252 | 3300049822 | Bacteria | 8695 |
| 137 | Ga0500646_0001645 | 3300053090 | Bacteria | 5912 |
| 138 | Ga0500641_0000005 | 3300053096 | Bacteria | 226810 |
| 139 | Ga0500641_0000057 | 3300053096 | Bacteria | 48444 |
| 140 | Ga0500641_0003237 | 3300053096 | Bacteria | 5756 |
| 141 | Ga0500658_0000014 | 3300053134 | Bacteria | 153278 |
| 142 | Ga0500616_0000015 | 3300053153 | Bacteria | 633259 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046507 | Ga0495606_0018601 | Ga0495606_0018601_2129_3913 | 537 |
| 2 | 3300048918 | Ga0496115_0030066 | Ga0496115_0030066_65_1789 | 541 |
| 3 | 3300049539 | Ga0501323_001536 | Ga0501323_001536_172_2061 | 575 |
| 4 | 3300049679 | Ga0501249_008809 | Ga0501249_008809_134_2023 | 575 |
| 5 | 3300042876 | Ga0451577_0001423 | Ga0451577_0001423_19957_21918 | 590 |
| 6 | iso_pu_bacteria | 2890804823 | 2890805000 | 593 |
| 7 | 3300037471 | Ga0395905_0000051 | Ga0395905_0000051_32230_34266 | 597 |
| 8 | 3300005293 | Ga0065715_10089218 | Ga0065715_100892183 | 629 |
| 9 | 3300005457 | Ga0070662_100008846 | Ga0070662_1000088465 | 629 |
| 10 | 3300037312 | Ga0395899_0051270 | Ga0395899_0051270_53_2158 | 629 |
| 11 | 3300005343 | Ga0070687_100030348 | Ga0070687_1000303482 | 630 |
| 12 | 3300005544 | Ga0070686_100000215 | Ga0070686_10000021529 | 630 |
| 13 | 3300025918 | Ga0207662_10033568 | Ga0207662_100335682 | 630 |
| 14 | 3300025933 | Ga0207706_10003462 | Ga0207706_100034626 | 630 |
| 15 | 3300042876 | Ga0451577_0013679 | Ga0451577_0013679_2450_4591 | 630 |
| 16 | 3300032004 | Ga0307414_10034784 | Ga0307414_100347842 | 632 |
| 17 | 3300013104 | Ga0157370_10011255 | Ga0157370_100112554 | 636 |
| 18 | iso_pu_bacteria | 8055588893 | 8055589992 | 636 |
| 19 | iso_pu_bacteria | 2721755487 | 2722730115 | 637 |
| 20 | iso_pu_bacteria | 2890737413 | 2890738208 | 637 |
| 21 | iso_pu_bacteria | 2896317667 | 2896321577 | 637 |
| 22 | iso_pu_bacteria | 2896344016 | 2896345594 | 637 |
| 23 | iso_pu_bacteria | 2898713307 | 2898715915 | 637 |
| 24 | iso_pu_bacteria | 2904780799 | 2904782918 | 637 |
| 25 | iso_pu_bacteria | 2919177583 | 2919179908 | 637 |
| 26 | iso_pu_bacteria | 3003233435 | 3003237413 | 637 |
| 27 | 3300035695 | Ga0373927_0010368 | Ga0373927_0010368_3220_5334 | 638 |
| 28 | 3300049571 | Ga0501034_0005455 | Ga0501034_0005455_1868_3952 | 639 |
| 29 | 3300049822 | Ga0501035_0010252 | Ga0501035_0010252_1455_3551 | 639 |
| 30 | 3300003781 | Ga0055536_1000010 | Ga0055536_100001042 | 640 |
| 31 | 3300003791 | Ga0055530_10004204 | Ga0055530_100042041 | 640 |
| 32 | 3300009148 | Ga0105243_10000002 | Ga0105243_1000000265 | 640 |
| 33 | 3300025292 | Ga0209676_1000009 | Ga0209676_1000009832 | 640 |
| 34 | 3300025298 | Ga0209050_1000103 | Ga0209050_100010341 | 640 |
| 35 | 3300025935 | Ga0207709_10000003 | Ga0207709_1000000365 | 640 |
| 36 | 3300045051 | Ga0451576_0003692 | Ga0451576_0003692_11873_13957 | 640 |
| 37 | 3300048919 | Ga0496116_0003323 | Ga0496116_0003323_11780_13882 | 640 |
| 38 | 3300048920 | Ga0496117_0004376 | Ga0496117_0004376_10099_12201 | 640 |
| 39 | 3300048921 | Ga0496118_0034813 | Ga0496118_0034813_441_2543 | 640 |
| 40 | 3300048927 | Ga0496124_0071728 | Ga0496124_0071728_611_2713 | 640 |
| 41 | iso_pu_bacteria | 2965320100 | 2965321301 | 640 |
| 42 | iso_pu_bacteria | 8036736890 | 8036736965 | 640 |
| 43 | 3300014497 | Ga0182008_10007636 | Ga0182008_100076363 | 641 |
| 44 | 3300032005 | Ga0307411_10001259 | Ga0307411_100012596 | 641 |
| 45 | iso_pu_bacteria | 2513020052 | 2513234586 | 641 |
| 46 | iso_pu_bacteria | 2519899754 | 2520880376 | 641 |
| 47 | iso_pu_bacteria | 2643221600 | 2644012235 | 641 |
| 48 | iso_pu_bacteria | 2643221667 | 2644374463 | 641 |
| 49 | iso_pu_bacteria | 2643221716 | 2644641517 | 641 |
| 50 | iso_pu_bacteria | 2643221725 | 2644682374 | 641 |
| 51 | iso_pu_bacteria | 2738541279 | 2738735923 | 641 |
| 52 | iso_pu_bacteria | 2738541285 | 2738768500 | 641 |
| 53 | iso_pu_bacteria | 2738543007 | 2739217505 | 641 |
| 54 | iso_pu_bacteria | 2739367857 | 2740000468 | 641 |
| 55 | iso_pu_bacteria | 2739367858 | 2740005284 | 641 |
| 56 | iso_pu_bacteria | 2802428842 | 2802651146 | 641 |
| 57 | iso_pu_bacteria | 2816332280 | 2817414034 | 641 |
| 58 | iso_pu_bacteria | 2833640130 | 2833641485 | 641 |
| 59 | iso_pu_bacteria | 2857613821 | 2857616239 | 641 |
| 60 | iso_pu_bacteria | 2857618242 | 2857622582 | 641 |
| 61 | iso_pu_bacteria | 2881359912 | 2881361331 | 641 |
| 62 | iso_pu_bacteria | 2903895155 | 2903896561 | 641 |
| 63 | iso_pu_bacteria | 2904419702 | 2904420489 | 641 |
| 64 | iso_pu_bacteria | 2904555929 | 2904557663 | 641 |
| 65 | iso_pu_bacteria | 2919191525 | 2919195821 | 641 |
| 66 | iso_pu_bacteria | 2919683626 | 2919686953 | 641 |
| 67 | iso_pu_bacteria | 2929150217 | 2929151177 | 641 |
| 68 | iso_pu_bacteria | 2958458903 | 2958461773 | 641 |
| 69 | iso_pu_bacteria | 2977268062 | 2977272559 | 641 |
| 70 | iso_pu_bacteria | 8054307821 | 8054310973 | 641 |
| 71 | iso_pu_bacteria | 8055419101 | 8055420229 | 641 |
| 72 | iso_pu_bacteria | 8055592153 | 8055593091 | 641 |
| 73 | iso_pu_bacteria | 8056440228 | 8056442790 | 641 |
| 74 | 3300005288 | Ga0065714_10071295 | Ga0065714_100712953 | 642 |
| 75 | 3300005289 | Ga0065704_10074250 | Ga0065704_100742504 | 642 |
| 76 | 3300005293 | Ga0065715_10098454 | Ga0065715_100984541 | 642 |
| 77 | 3300005293 | Ga0065715_10117106 | Ga0065715_101171061 | 642 |
| 78 | 3300006942 | Ga0099824_1007872 | Ga0099824_10078724 | 642 |
| 79 | 3300006946 | Ga0079104_1000146 | Ga0079104_100014680 | 642 |
| 80 | 3300006948 | Ga0099826_10001850 | Ga0099826_1000185013 | 642 |
| 81 | 3300009036 | Ga0105244_10000112 | Ga0105244_1000011244 | 642 |
| 82 | 3300009092 | Ga0105250_10006701 | Ga0105250_100067011 | 642 |
| 83 | 3300013100 | Ga0157373_10000023 | Ga0157373_1000002315 | 642 |
| 84 | 3300013102 | Ga0157371_10006421 | Ga0157371_100064212 | 642 |
| 85 | 3300013104 | Ga0157370_10001180 | Ga0157370_1000118010 | 642 |
| 86 | 3300013104 | Ga0157370_10005592 | Ga0157370_100055929 | 642 |
| 87 | 3300013104 | Ga0157370_10011873 | Ga0157370_100118737 | 642 |
| 88 | 3300013104 | Ga0157370_10027682 | Ga0157370_100276824 | 642 |
| 89 | 3300013105 | Ga0157369_10006907 | Ga0157369_1000690711 | 642 |
| 90 | 3300013308 | Ga0157375_10036026 | Ga0157375_100360263 | 642 |
| 91 | 3300015261 | Ga0182006_1004286 | Ga0182006_10042865 | 642 |
| 92 | 3300015261 | Ga0182006_1009664 | Ga0182006_10096642 | 642 |
| 93 | 3300017792 | Ga0163161_10000449 | Ga0163161_1000044915 | 642 |
| 94 | 3300025728 | Ga0207655_1000003 | Ga0207655_1000003150 | 642 |
| 95 | 3300027111 | Ga0209281_1000045 | Ga0209281_1000045115 | 642 |
| 96 | 3300027361 | Ga0209489_108520 | Ga0209489_1085204 | 642 |
| 97 | 3300027876 | Ga0209974_10018110 | Ga0209974_100181102 | 642 |
| 98 | 3300031731 | Ga0307405_10000001 | Ga0307405_1000000127 | 642 |
| 99 | 3300031824 | Ga0307413_10000012 | Ga0307413_1000001238 | 642 |
| 100 | 3300031901 | Ga0307406_10000062 | Ga0307406_1000006248 | 642 |
| 101 | 3300032002 | Ga0307416_100000604 | Ga0307416_10000060413 | 642 |
| 102 | 3300032004 | Ga0307414_10000027 | Ga0307414_10000027129 | 642 |
| 103 | 3300032005 | Ga0307411_10000003 | Ga0307411_10000003372 | 642 |
| 104 | 3300032005 | Ga0307411_10009593 | Ga0307411_100095933 | 642 |
| 105 | 3300033180 | Ga0307510_10002290 | Ga0307510_1000229013 | 642 |
| 106 | 3300041407 | Ga0439447_000028 | Ga0439447_000028_23566_25665 | 642 |
| 107 | 3300041411 | Ga0439466_0000467 | Ga0439466_0000467_7884_9983 | 642 |
| 108 | 3300041411 | Ga0439466_0019376 | Ga0439466_0019376_153_2252 | 642 |
| 109 | 3300042876 | Ga0451577_0002147 | Ga0451577_0002147_12977_15094 | 642 |
| 110 | 3300044712 | Ga0453684_0001264 | Ga0453684_0001264_7864_9981 | 642 |
| 111 | 3300046660 | Ga0495625_0058463 | Ga0495625_0058463_320_2419 | 642 |
| 112 | 3300048919 | Ga0496116_0001214 | Ga0496116_0001214_24234_26333 | 642 |
| 113 | 3300048924 | Ga0496121_0020774 | Ga0496121_0020774_1309_3408 | 642 |
| 114 | 3300048928 | Ga0496125_0000098 | Ga0496125_0000098_24062_26161 | 642 |
| 115 | 3300048929 | Ga0496126_0010401 | Ga0496126_0010401_2723_4822 | 642 |
| 116 | 3300048929 | Ga0496126_0076435 | Ga0496126_0076435_68_2167 | 642 |
| 117 | 3300049671 | Ga0501238_000378 | Ga0501238_000378_3277_5376 | 642 |
| 118 | 3300049679 | Ga0501249_000013 | Ga0501249_000013_115348_117447 | 642 |
| 119 | 3300049679 | Ga0501249_000788 | Ga0501249_000788_4377_6476 | 642 |
| 120 | 3300049763 | Ga0501266_000003 | Ga0501266_000003_325338_327437 | 642 |
| 121 | 3300053096 | Ga0500641_0000005 | Ga0500641_0000005_78858_80957 | 642 |
| 122 | 3300053096 | Ga0500641_0003237 | Ga0500641_0003237_953_3052 | 642 |
| 123 | 3300053134 | Ga0500658_0000014 | Ga0500658_0000014_20289_22388 | 642 |
| 124 | iso_pu_bacteria | 2881247448 | 2881248790 | 642 |
| 125 | iso_pu_bacteria | 2919509842 | 2919513040 | 642 |
| 126 | 3300032004 | Ga0307414_10000824 | Ga0307414_1000082410 | 643 |
| 127 | iso_pu_bacteria | 2919692658 | 2919694613 | 643 |
| 128 | iso_pu_bacteria | 2958512119 | 2958515176 | 643 |
| 129 | 3300046522 | Ga0495643_0000904 | Ga0495643_0000904_10111_12219 | 644 |
| 130 | 3300048928 | Ga0496125_0000189 | Ga0496125_0000189_116828_118933 | 644 |
| 131 | 3300048929 | Ga0496126_0006561 | Ga0496126_0006561_1923_4028 | 644 |
| 132 | 3300053090 | Ga0500646_0001645 | Ga0500646_0001645_640_2748 | 644 |
| 133 | iso_pu_bacteria | 2585427687 | 2586209259 | 644 |
| 134 | iso_pu_bacteria | 2738541302 | 2738854060 | 644 |
| 135 | iso_pu_bacteria | 2739367651 | 2739587535 | 644 |
| 136 | iso_pu_bacteria | 2739367656 | 2739618135 | 644 |
| 137 | iso_pu_bacteria | 2739367663 | 2739646211 | 644 |
| 138 | iso_pu_bacteria | 2818991437 | 2819545447 | 644 |
| 139 | iso_pu_bacteria | 2849281842 | 2849285688 | 644 |
| 140 | iso_pu_bacteria | 2884634485 | 2884635007 | 644 |
| 141 | iso_pu_bacteria | 2904445276 | 2904447937 | 644 |
| 142 | 3300013104 | Ga0157370_10001277 | Ga0157370_1000127717 | 645 |
| 143 | 3300013306 | Ga0163162_10006399 | Ga0163162_100063997 | 645 |
| 144 | 3300013306 | Ga0163162_10029186 | Ga0163162_100291864 | 645 |
| 145 | 3300017792 | Ga0163161_10003317 | Ga0163161_100033175 | 645 |
| 146 | 3300017792 | Ga0163161_10032464 | Ga0163161_100324642 | 645 |
| 147 | 3300053096 | Ga0500641_0000057 | Ga0500641_0000057_7966_10074 | 645 |
| 148 | iso_pu_bacteria | 2902048731 | 2902052971 | 645 |
| 149 | 3300003316 | rootH1_10024721 | rootH1_1002472115 | 646 |
| 150 | 3300003322 | rootL2_10115235 | rootL2_1011523517 | 646 |
| 151 | 3300003323 | rootH1_10020954 | rootH1_100209544 | 646 |
| 152 | 3300003323 | rootH1_10025005 | rootH1_100250055 | 646 |
| 153 | 3300003323 | rootH1_10113739 | rootH1_101137394 | 646 |
| 154 | 3300005337 | Ga0070682_100038324 | Ga0070682_1000383242 | 646 |
| 155 | 3300015682 | Ga0183373_1013 | Ga0183373_101338 | 646 |
| 156 | 3300017792 | Ga0163161_10000475 | Ga0163161_1000047523 | 646 |
| 157 | 3300028794 | Ga0307515_10000012 | Ga0307515_1000001230 | 646 |
| 158 | 3300030731 | Ga0316177_1043701 | Ga0316177_10437012 | 646 |
| 159 | 3300031507 | Ga0307509_10016710 | Ga0307509_100167104 | 646 |
| 160 | 3300044673 | Ga0453683_0021245 | Ga0453683_0021245_692_2809 | 646 |
| 161 | 3300044712 | Ga0453684_0132735 | Ga0453684_0132735_423_2540 | 646 |
| 162 | 3300045051 | Ga0451576_0008086 | Ga0451576_0008086_3611_5728 | 646 |
| 163 | 3300046512 | Ga0495610_0000680 | Ga0495610_0000680_10935_13043 | 646 |
| 164 | 3300046512 | Ga0495610_0001782 | Ga0495610_0001782_15173_17281 | 646 |
| 165 | 3300003323 | rootH1_10000027 | rootH1_100000273 | 647 |
| 166 | 3300005288 | Ga0065714_10064503 | Ga0065714_100645032 | 647 |
| 167 | 3300013102 | Ga0157371_10000496 | Ga0157371_1000049636 | 647 |
| 168 | 3300025298 | Ga0209050_1001156 | Ga0209050_10011569 | 647 |
| 169 | 3300031548 | Ga0307408_100009278 | Ga0307408_1000092786 | 647 |
| 170 | 3300031903 | Ga0307407_10003705 | Ga0307407_100037055 | 647 |
| 171 | 3300032002 | Ga0307416_100007847 | Ga0307416_1000078477 | 647 |
| 172 | 3300046460 | Ga0495638_0000004 | Ga0495638_0000004_433557_435677 | 647 |
| 173 | 3300049670 | Ga0501236_000105 | Ga0501236_000105_13_2130 | 647 |
| 174 | 3300049761 | Ga0501264_000155 | Ga0501264_000155_4181_6298 | 647 |
| 175 | 3300053153 | Ga0500616_0000015 | Ga0500616_0000015_392049_394169 | 647 |
| 176 | 3300002773 | JGI25152J39213_1000203 | JGI25152J39213_100020325 | 648 |
| 177 | 3300002774 | JGI25150J39212_1000025 | JGI25150J39212_100002571 | 648 |
| 178 | 3300003187 | JGI25151J46595_10000089 | JGI25151J46595_1000008971 | 648 |
| 179 | 3300003215 | JGI25153J46596_10000079 | JGI25153J46596_1000007936 | 648 |
| 180 | 3300006844 | Ga0075428_100012024 | Ga0075428_1000120243 | 648 |
| 181 | 3300009094 | Ga0111539_10030418 | Ga0111539_100304183 | 648 |
| 182 | 3300013105 | Ga0157369_10000414 | Ga0157369_1000041414 | 648 |
| 183 | 3300015261 | Ga0182006_1000253 | Ga0182006_100025336 | 648 |
| 184 | 3300015261 | Ga0182006_1000929 | Ga0182006_10009299 | 648 |
| 185 | 3300015262 | Ga0182007_10000009 | Ga0182007_1000000935 | 648 |
| 186 | 3300025245 | Ga0207425_1000008 | Ga0207425_1000008494 | 648 |
| 187 | 3300025258 | Ga0209129_1000042 | Ga0209129_1000042229 | 648 |
| 188 | 3300025294 | Ga0209025_1000020 | Ga0209025_1000020494 | 648 |
| 189 | 3300025297 | Ga0209758_1000022 | Ga0209758_1000022494 | 648 |
| 190 | 3300027907 | Ga0207428_10050605 | Ga0207428_100506054 | 648 |
| 191 | 3300031731 | Ga0307405_10000036 | Ga0307405_1000003646 | 648 |
| 192 | 3300031903 | Ga0307407_10000006 | Ga0307407_1000000637 | 648 |
| 193 | 3300031995 | Ga0307409_100024424 | Ga0307409_1000244242 | 648 |
| 194 | 3300032002 | Ga0307416_100000058 | Ga0307416_10000005856 | 648 |
| 195 | 3300032004 | Ga0307414_10032976 | Ga0307414_100329763 | 648 |
| 196 | 3300049663 | Ga0501223_000550 | Ga0501223_000550_6523_8640 | 648 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7o9k-assembly1.cif.gz_G | human mitochondrial ribosome large subunit assembly intermediate with mterf4-nsun4, mrm2, mtg1, the malsu module, gtpbp5 and mtef-tu | 0.7874 | 2 | 59 |
| 7ohu-assembly1.cif.gz_b | nog1-tap associated immature ribosomal particles from s. cerevisiae after rpl2 expression shut down, population b | 0.7805 | 4 | 77 |
| 8etg-assembly1.cif.gz_b | fkbp39 associated 60s nascent ribosome state 3 | 0.7645 | 3 | 59 |
| 7ohy-assembly1.cif.gz_b | nog1-tap associated immature ribosomal particles from s. cerevisiae after rpl34 expression shut down, population b | 0.7618 | 2 | 91 |
| 7po2-assembly1.cif.gz_7 | initiation complex of human mitochondrial ribosome small subunit with if2, fmet-trnamet and mrna | 0.7524 | 1 | 92 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q8IEJ7_196_382_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.7706 | 1 | 92 | 3.40.50.300 |
| af_Q8I3U2_988_1163_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.7588 | 1 | 92 | 3.40.50.300 |
| af_F4I4A6_191_390_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.7499 | 3 | 92 | 3.40.50.300 |
| af_Q2G2D0_205_378_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.7368 | 1 | 92 | 3.40.50.300 |
| af_Q2FY06_2_183_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.7072 | 2 | 96 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4V2ARK1-F1-model_v4 | Ferrous iron transport protein B | 0.9719 | 213 | 648 |
GO:0005525
GO:0005886 GO:0015093 |
| AF-A0A4V2ARK1-F1-model_v4 | Ferrous iron transport protein B | 0.9654 | 213 | 648 |
GO:0005525
GO:0005886 GO:0015093 |
| AF-A0A520IV84-F1-model_v4 | Ferrous iron transport protein B | 0.9306 | 88 | 648 |
GO:0005525
GO:0005886 GO:0015093 |
| AF-A0A524JRA8-F1-model_v4 | Ferrous iron transporter B | 0.9282 | 513 | 648 |
GO:0005886
GO:0015093 |
| AF-A0A519QZT6-F1-model_v4 | Ferrous iron transporter B | 0.9236 | 392 | 648 |
GO:0005886
GO:0015093 |
Predicted Structure (AlphaFold2)
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