F300766

General Info

Members Datasets Scaffolds Average Seq Length
195 151 183 430

Family's Representative Sequence

Representative Sequence 3300053087|Ga0500643_000755|Ga0500643_000755_16085_17602
Length 505
Sequence MTRRRKAKAGAIPSLSSPRRRGSIFSEPRDSSASEHLDPRLREDDNGEGGDGNKEDAERKAPLDASLIEEVVWQGPDHIADFARELNGRLLDEAERNWLVWGRLPQQPPRDCDWRTWLIMAGRGFGKTRAGAEWVRMIAETDPAARIALVGATMSEARAVMVEGDSGLLAISHELRPRYEPSLGRLTWPGGAVAWLYSAAEPEHLRGPQHSHAWADEIAKWPDGIRLWDTLAMTIRLGRKPRTVATTTPRPVPLLRRLRANARGDVVVTRGRTHENAGHIAPDFLDAMDAHYAGTRFGRQELDGEWIDAIEGALWSRELIEDRRVAAIPAEVRRVVIGVDPPAGASAASDACGIVVVAKGEDGRAYVIADASVQGLSPEGWARAVAMAAEVHRADRVIAEANNGGAMVESVLRAAGARTLPVRLVHAAHGKAARAEPVAALYEAGTAFHVGAFQELEDEMAGLVIGGEYCGPGRSPDRADALVWAMTELMLGPGGREPRVRIIGG

Samples

Sample ID Description Type Environment
1 2534681786 Brucella suis 92/29 Isolate Unclassified
2 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
3 2751185800 Brucella pituitosa AA2 Isolate Unclassified
4 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
5 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
6 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
7 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
8 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
9 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
10 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
11 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
12 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
13 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
14 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
15 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
16 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
17 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
18 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
19 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
20 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
21 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
22 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
23 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
24 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
25 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
26 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
27 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
28 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
29 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
30 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
31 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
32 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
33 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
34 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
35 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
63 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
65 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
66 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
69 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
71 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
98 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
99 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
100 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
101 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
102 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
103 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
104 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
105 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
106 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
109 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
110 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
111 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
112 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
113 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
114 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
115 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
116 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
117 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
118 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
119 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
120 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
124 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
125 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
126 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
127 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
128 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
129 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
130 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
131 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
132 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
135 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
136 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
143 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
144 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
145 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
146 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
147 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
148 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
149 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
150 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
151 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.33
Metatranscriptomes 0.51
Isolates 6.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.97
Nodule 0
Rhizoplane 5.13
Rhizosphere 67.18
Stem 0
Stem Tuber 0
Unclassified 8.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1001311 3300001904 Bacteria 4558
2 JGI24740J21852_10022698 3300001979 Bacteria 2155
3 JGI25150J39212_1000121 3300002774 Bacteria 44003
4 JGI25153J46596_10000032 3300003215 Bacteria 196732
5 Ga0055526_1000606 3300003771 Bacteria 27941
6 Ga0055537_1002849 3300003773 Bacteria 5544
7 Ga0055530_10016985 3300003791 Bacteria 2294
8 Ga0055540_1000843 3300003792 Bacteria 20570
9 Ga0065165_1002993 3300005262 Bacteria 12818
10 Ga0065704_10098275 3300005289 Bacteria 2360
11 Ga0070658_10037682 3300005327 Bacteria 3898
12 Ga0070658_10047496 3300005327 Bacteria 3475
13 Ga0070683_100023182 3300005329 Bacteria 5551
14 Ga0070670_100004726 3300005331 Bacteria 11428
15 Ga0070682_100113944 3300005337 Bacteria 1806
16 Ga0068868_100000002 3300005338 Bacteria 159433
17 Ga0070660_100012884 3300005339 Bacteria 5983
18 Ga0070660_100026557 3300005339 Bacteria 4312
19 Ga0070661_100000263 3300005344 Bacteria 43084
20 Ga0070669_100035653 3300005353 Bacteria 3604
21 Ga0070714_100175381 3300005435 Bacteria 1948
22 Ga0070663_100015185 3300005455 Bacteria 4963
23 Ga0070663_100113868 3300005455 Bacteria 2036
24 Ga0070663_100143778 3300005455 Bacteria 1823
25 Ga0070685_10019387 3300005466 Bacteria 3668
26 Ga0070679_100027466 3300005530 Bacteria 5602
27 Ga0070679_100061728 3300005530 Bacteria 3736
28 Ga0070684_100256533 3300005535 Bacteria 1599
29 Ga0070665_100000195 3300005548 Bacteria 106493
30 Ga0070664_100047239 3300005564 Bacteria 3636
31 Ga0070664_100112334 3300005564 Bacteria 2379
32 Ga0068857_100044589 3300005577 Bacteria 3934
33 Ga0068854_100003002 3300005578 Bacteria 10473
34 Ga0068854_100063154 3300005578 Bacteria 2688
35 Ga0068856_100018556 3300005614 Bacteria 6741
36 Ga0068852_100223622 3300005616 Bacteria 1791
37 Ga0068859_100058658 3300005617 Bacteria 3877
38 Ga0068863_100011726 3300005841 Bacteria 8477
39 Ga0097620_100058669 3300006931 Bacteria 3877
40 Ga0105240_10000959 3300009093 Bacteria 51453
41 Ga0105240_10217683 3300009093 Bacteria 2227
42 Ga0105240_10311697 3300009093 Bacteria 1797
43 Ga0111539_10005899 3300009094 Bacteria 15822
44 Ga0105245_10056721 3300009098 Bacteria 3521
45 Ga0114129_10025955 3300009147 Bacteria 8298
46 Ga0105241_10036679 3300009174 Bacteria 3690
47 Ga0105248_10053624 3300009177 Bacteria 4524
48 Ga0105248_10119867 3300009177 Bacteria 2968
49 Ga0105237_10003217 3300009545 Bacteria 19562
50 Ga0105237_10018222 3300009545 Bacteria 7265
51 Ga0105238_10000753 3300009551 Bacteria 33693
52 Ga0105238_10290453 3300009551 Bacteria 1617
53 Ga0105239_10077956 3300010375 Bacteria 3646
54 Ga0105246_10075616 3300011119 Bacteria 2384
55 Ga0157373_10050419 3300013100 Bacteria 2964
56 Ga0157370_10023373 3300013104 Bacteria 6137
57 Ga0157370_10043960 3300013104 Bacteria 4297
58 Ga0157369_10043567 3300013105 Bacteria 4891
59 Ga0157375_10162378 3300013308 Bacteria 2377
60 Ga0163163_10234436 3300014325 Bacteria 1885
61 Ga0157380_10190355 3300014326 Bacteria 1811
62 Ga0206353_10336504 3300020082 Bacteria 4744
63 Ga0213876_10000263 3300021384 Bacteria 48650
64 Ga0209147_101020 3300025229 Bacteria 11948
65 Ga0207425_1000025 3300025245 Bacteria 321872
66 Ga0209129_1004316 3300025258 Bacteria 5639
67 Ga0209565_1000044 3300025263 Bacteria 229969
68 Ga0209676_1009270 3300025292 Bacteria 4265
69 Ga0209025_1000176 3300025294 Bacteria 158186
70 Ga0209564_1000886 3300025295 Bacteria 39513
71 Ga0209758_1000002 3300025297 Bacteria 1400310
72 Ga0209758_1007771 3300025297 Bacteria 7177
73 Ga0209050_1000001 3300025298 Bacteria 3563507
74 Ga0209050_1000350 3300025298 Bacteria 88878
75 Ga0209050_1022091 3300025298 Bacteria 2293
76 Ga0209051_1000919 3300025303 Bacteria 29216
77 Ga0209257_1002786 3300025304 Bacteria 16497
78 Ga0209257_1002907 3300025304 Bacteria 15827
79 Ga0207705_10015954 3300025909 Bacteria 5392
80 Ga0207695_10000521 3300025913 Bacteria 81496
81 Ga0207695_10088308 3300025913 Bacteria 3121
82 Ga0207671_10000812 3300025914 Bacteria 39489
83 Ga0207657_10002279 3300025919 Bacteria 20800
84 Ga0207657_10018391 3300025919 Bacteria 6672
85 Ga0207657_10084176 3300025919 Bacteria 2666
86 Ga0207649_10017142 3300025920 Bacteria 4102
87 Ga0207652_10000474 3300025921 Bacteria 41182
88 Ga0207681_10061366 3300025923 Bacteria 2584
89 Ga0207681_10111679 3300025923 Bacteria 1989
90 Ga0207694_10000715 3300025924 Bacteria 29850
91 Ga0207694_10019856 3300025924 Bacteria 5083
92 Ga0207644_10020849 3300025931 Bacteria 4459
93 Ga0207644_10126410 3300025931 Bacteria 1952
94 Ga0207711_10283175 3300025941 Bacteria 1527
95 Ga0207679_10111754 3300025945 Bacteria 2158
96 Ga0207640_10020181 3300025981 Bacteria 3953
97 Ga0207677_10000080 3300026023 Bacteria 79544
98 Ga0207639_10009431 3300026041 Bacteria 6733
99 Ga0207639_10019593 3300026041 Bacteria 4827
100 Ga0207678_10000084 3300026067 Bacteria 76874
101 Ga0207678_10033358 3300026067 Bacteria 4486
102 Ga0207702_10008635 3300026078 Bacteria 8594
103 Ga0207702_10060475 3300026078 Bacteria 3230
104 Ga0207641_10010204 3300026088 Bacteria 7725
105 Ga0207676_10086841 3300026095 Bacteria 2556
106 Ga0207674_10004870 3300026116 Bacteria 16075
107 Ga0207698_10171513 3300026142 Bacteria 1911
108 Ga0207698_10214509 3300026142 Bacteria 1734
109 Ga0268266_10000865 3300028379 Bacteria 39418
110 Ga0265340_10013360 3300031247 Bacteria 4313
111 Ga0307408_100230490 3300031548 Bacteria 1516
112 Ga0307413_10075716 3300031824 Bacteria 2137
113 Ga0307410_10054407 3300031852 Bacteria 2713
114 Ga0307412_10021658 3300031911 Bacteria 3929
115 Ga0307412_10022826 3300031911 Bacteria 3842
116 Ga0307416_100133189 3300032002 Bacteria 2242
117 Ga0307411_10061936 3300032005 Bacteria 2493
118 Ga0373939_0011953 3300035114 Bacteria 2203
119 Ga0395899_0005097 3300037312 Bacteria 10226
120 Ga0395900_0000855 3300037418 Bacteria 40101
121 Ga0395898_0005963 3300037466 Bacteria 13081
122 Ga0395905_0056519 3300037471 Bacteria 3670
123 Ga0395901_0058691 3300038443 Bacteria 4002
124 Ga0466968_0001348 3300044735 Bacteria 8765
125 Ga0495627_000108 3300046453 Bacteria 102455
126 Ga0495627_000410 3300046453 Bacteria 37915
127 Ga0495606_0002641 3300046507 Bacteria 20459
128 Ga0495610_0000697 3300046512 Bacteria 32312
129 Ga0495637_0004140 3300046520 Bacteria 7549
130 Ga0495648_0007386 3300046524 Bacteria 8801
131 Ga0495654_0008083 3300046530 Bacteria 5834
132 Ga0495654_0050458 3300046530 Bacteria 2033
133 Ga0495681_0000129 3300047470 Bacteria 66033
134 Ga0495686_0013685 3300047472 Bacteria 5623
135 Ga0496102_0102491 3300048905 Bacteria 2661
136 Ga0496104_0031997 3300048907 Bacteria 4895
137 Ga0496105_0136949 3300048908 Bacteria 2017
138 Ga0496108_0005214 3300048911 Bacteria 10498
139 Ga0496108_0041644 3300048911 Bacteria 3835
140 Ga0496108_0071868 3300048911 Bacteria 2920
141 Ga0496109_0033044 3300048912 Bacteria 4654
142 Ga0496109_0101965 3300048912 Bacteria 2664
143 Ga0496110_0050243 3300048913 Bacteria 3661
144 Ga0496115_0108580 3300048918 Bacteria 2278
145 Ga0496116_0014108 3300048919 Bacteria 6399
146 Ga0496117_0007046 3300048920 Bacteria 11125
147 Ga0496117_0016572 3300048920 Bacteria 6209
148 Ga0496119_0059246 3300048922 Bacteria 2301
149 Ga0496120_0116798 3300048923 Bacteria 1385
150 Ga0496121_0001608 3300048924 Bacteria 37482
151 Ga0496121_0003086 3300048924 Bacteria 24113
152 Ga0496122_0003022 3300048925 Bacteria 22818
153 Ga0496123_0002155 3300048926 Bacteria 25154
154 Ga0496123_0085913 3300048926 Bacteria 1890
155 Ga0496124_0151734 3300048927 Bacteria 1817
156 Ga0496125_0156723 3300048928 Bacteria 1554
157 Ga0501034_0099121 3300049571 Bacteria 2909
158 Ga0501223_000903 3300049663 Bacteria 7033
159 Ga0501257_000304 3300049686 Bacteria 9512
160 Ga0501225_0001636 3300049705 Bacteria 7002
161 Ga0501225_0015186 3300049705 Bacteria 2147
162 Ga0501044_0028501 3300049823 Bacteria 5894
163 Ga0501044_0142736 3300049823 Bacteria 2382
164 nmdc:mga05p37_235860_c1 3300050507 Bacteria 2202
165 nmdc:mga09592_91235_c1 3300050508 Bacteria 2603
166 nmdc:mga0qj67_339528_c1 3300050509 Bacteria 1215
167 nmdc:mga08y16_137510_c1 3300050511 Bacteria 2540
168 nmdc:mga0a205_202641_c1 3300050515 Bacteria 1874
169 Ga0500643_000039 3300053087 Bacteria 169629
170 Ga0500643_000136 3300053087 Bacteria 74292
171 Ga0500643_000755 3300053087 Bacteria 21096
172 Ga0500643_000925 3300053087 Bacteria 18421
173 Ga0500592_000969 3300053116 Bacteria 4680
174 Ga0500559_0001226 3300053136 Bacteria 15189
175 Ga0500559_0057569 3300053136 Bacteria 1727
176 Ga0500568_0000311 3300053139 Bacteria 38774
177 Ga0500616_0000265 3300053153 Bacteria 79258
178 Ga0500616_0001209 3300053153 Bacteria 26110
179 Ga0500624_000008 3300053157 Bacteria 181801
180 Ga0500627_0000091 3300053158 Bacteria 30128
181 Ga0500627_0000458 3300053158 Bacteria 11088
182 Ga0500637_0000071 3300053178 Bacteria 36292
183 Ga0500661_000095 3300055283 Bacteria 14070

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050509 nmdc:mga0qj67_339528_c1 nmdc:mga0qj67_339528_c1_112_1185 335
2 3300050515 nmdc:mga0a205_202641_c1 nmdc:mga0a205_202641_c1_17_1108 337
3 3300014325 Ga0163163_10234436 Ga0163163_102344362 339
4 3300048907 Ga0496104_0031997 Ga0496104_0031997_637_1710 339
5 3300048911 Ga0496108_0041644 Ga0496108_0041644_927_2000 339
6 3300048912 Ga0496109_0033044 Ga0496109_0033044_2083_3156 339
7 3300048918 Ga0496115_0108580 Ga0496115_0108580_188_1261 339
8 3300025919 Ga0207657_10018391 Ga0207657_100183912 355
9 3300049686 Ga0501257_000304 Ga0501257_000304_28_1125 363
10 3300053087 Ga0500643_000039 Ga0500643_000039_165633_166784 379
11 3300005578 Ga0068854_100003002 Ga0068854_1000030022 388
12 3300009545 Ga0105237_10003217 Ga0105237_1000321715 388
13 3300025914 Ga0207671_10000812 Ga0207671_100008126 388
14 3300005564 Ga0070664_100112334 Ga0070664_1001123341 391
15 3300048924 Ga0496121_0001608 Ga0496121_0001608_13346_14668 393
16 3300053087 Ga0500643_000136 Ga0500643_000136_19780_21123 394
17 3300050508 nmdc:mga09592_91235_c1 nmdc:mga09592_91235_c1_272_1573 396
18 iso_pu_bacteria 2751185800 2753358908 398
19 iso_pu_bacteria 2758568016 2758641143 398
20 3300053087 Ga0500643_000925 Ga0500643_000925_12828_14183 400
21 3300046453 Ga0495627_000108 Ga0495627_000108_86905_88218 401
22 3300046512 Ga0495610_0000697 Ga0495610_0000697_29594_30907 401
23 3300046520 Ga0495637_0004140 Ga0495637_0004140_4697_6010 401
24 3300047470 Ga0495681_0000129 Ga0495681_0000129_35929_37242 401
25 3300048908 Ga0496105_0136949 Ga0496105_0136949_406_1695 401
26 3300048923 Ga0496120_0116798 Ga0496120_0116798_101_1336 402
27 3300048928 Ga0496125_0156723 Ga0496125_0156723_245_1480 402
28 3300055283 Ga0500661_000095 Ga0500661_000095_10522_11892 403
29 3300009094 Ga0111539_10005899 Ga0111539_1000589914 404
30 3300009147 Ga0114129_10025955 Ga0114129_100259552 404
31 3300014326 Ga0157380_10190355 Ga0157380_101903551 404
32 3300025923 Ga0207681_10061366 Ga0207681_100613662 404
33 3300050507 nmdc:mga05p37_235860_c1 nmdc:mga05p37_235860_c1_302_1612 404
34 iso_pu_bacteria 2829745981 2829746680 404
35 iso_pu_bacteria 2915650412 2915651410 404
36 3300053136 Ga0500559_0001226 Ga0500559_0001226_11605_12975 405
37 iso_pu_bacteria 2534681786 2535484341 405
38 3300050511 nmdc:mga08y16_137510_c1 nmdc:mga08y16_137510_c1_303_1622 407
39 3300009098 Ga0105245_10056721 Ga0105245_100567212 408
40 3300013308 Ga0157375_10162378 Ga0157375_101623782 408
41 3300009093 Ga0105240_10000959 Ga0105240_1000095950 411
42 3300009177 Ga0105248_10053624 Ga0105248_100536245 411
43 3300025913 Ga0207695_10000521 Ga0207695_1000052174 411
44 3300025941 Ga0207711_10283175 Ga0207711_102831752 411
45 3300049823 Ga0501044_0142736 Ga0501044_0142736_652_1938 411
46 3300053139 Ga0500568_0000311 Ga0500568_0000311_7619_8995 411
47 3300009551 Ga0105238_10000753 Ga0105238_100007537 413
48 3300031247 Ga0265340_10013360 Ga0265340_100133603 413
49 3300053136 Ga0500559_0057569 Ga0500559_0057569_367_1683 415
50 3300048927 Ga0496124_0151734 Ga0496124_0151734_149_1462 417
51 3300009093 Ga0105240_10217683 Ga0105240_102176832 419
52 3300048920 Ga0496117_0016572 Ga0496117_0016572_43_1356 421
53 3300046530 Ga0495654_0008083 Ga0495654_0008083_2225_3553 423
54 3300053116 Ga0500592_000969 Ga0500592_000969_3243_4571 423
55 3300053158 Ga0500627_0000091 Ga0500627_0000091_931_2259 423
56 3300053153 Ga0500616_0000265 Ga0500616_0000265_69361_70737 424
57 3300053153 Ga0500616_0001209 Ga0500616_0001209_4552_5853 424
58 3300047472 Ga0495686_0013685 Ga0495686_0013685_542_1855 427
59 3300049663 Ga0501223_000903 Ga0501223_000903_1345_2631 427
60 3300005344 Ga0070661_100000263 Ga0070661_1000002636 428
61 3300048919 Ga0496116_0014108 Ga0496116_0014108_4346_5701 428
62 3300048920 Ga0496117_0007046 Ga0496117_0007046_8192_9547 428
63 3300031824 Ga0307413_10075716 Ga0307413_100757162 429
64 3300048922 Ga0496119_0059246 Ga0496119_0059246_12_1334 429
65 3300049823 Ga0501044_0028501 Ga0501044_0028501_2542_3864 429
66 3300025924 Ga0207694_10000715 Ga0207694_1000071521 430
67 iso_pu_bacteria 2808606401 2809061924 430
68 iso_pu_bacteria 2808606404 2809077888 430
69 iso_pu_bacteria 2808606405 2809082404 430
70 iso_pu_bacteria 2880518877 2880519892 430
71 iso_pu_bacteria 2919709256 2919711616 430
72 3300005329 Ga0070683_100023182 Ga0070683_1000231823 431
73 3300005337 Ga0070682_100113944 Ga0070682_1001139442 431
74 3300005339 Ga0070660_100026557 Ga0070660_1000265573 431
75 3300005353 Ga0070669_100035653 Ga0070669_1000356534 431
76 3300005455 Ga0070663_100143778 Ga0070663_1001437783 431
77 3300005530 Ga0070679_100061728 Ga0070679_1000617281 431
78 3300005564 Ga0070664_100047239 Ga0070664_1000472394 431
79 3300005577 Ga0068857_100044589 Ga0068857_1000445895 431
80 3300005616 Ga0068852_100223622 Ga0068852_1002236221 431
81 3300005617 Ga0068859_100058658 Ga0068859_1000586584 431
82 3300006931 Ga0097620_100058669 Ga0097620_1000586694 431
83 3300009177 Ga0105248_10119867 Ga0105248_101198673 431
84 3300011119 Ga0105246_10075616 Ga0105246_100756163 431
85 3300013104 Ga0157370_10023373 Ga0157370_100233734 431
86 3300025919 Ga0207657_10002279 Ga0207657_1000227912 431
87 3300025923 Ga0207681_10111679 Ga0207681_101116792 431
88 3300026067 Ga0207678_10033358 Ga0207678_100333582 431
89 3300026078 Ga0207702_10060475 Ga0207702_100604752 431
90 3300026095 Ga0207676_10086841 Ga0207676_100868413 431
91 3300026116 Ga0207674_10004870 Ga0207674_1000487018 431
92 3300037312 Ga0395899_0005097 Ga0395899_0005097_1437_2750 431
93 3300037418 Ga0395900_0000855 Ga0395900_0000855_9292_10605 431
94 3300037466 Ga0395898_0005963 Ga0395898_0005963_2713_4026 431
95 3300037471 Ga0395905_0056519 Ga0395905_0056519_1253_2566 431
96 3300038443 Ga0395901_0058691 Ga0395901_0058691_1437_2750 431
97 3300005455 Ga0070663_100015185 Ga0070663_1000151852 432
98 3300005578 Ga0068854_100063154 Ga0068854_1000631542 432
99 3300025919 Ga0207657_10084176 Ga0207657_100841762 432
100 3300025920 Ga0207649_10017142 Ga0207649_100171423 432
101 3300025945 Ga0207679_10111754 Ga0207679_101117542 432
102 3300025981 Ga0207640_10020181 Ga0207640_100201812 432
103 3300026142 Ga0207698_10214509 Ga0207698_102145092 432
104 3300035114 Ga0373939_0011953 Ga0373939_0011953_146_1543 432
105 iso_pu_bacteria 2643221588 2643950938 432
106 3300002774 JGI25150J39212_1000121 JGI25150J39212_100012145 433
107 3300003215 JGI25153J46596_10000032 JGI25153J46596_10000032120 433
108 3300003771 Ga0055526_1000606 Ga0055526_100060630 433
109 3300003773 Ga0055537_1002849 Ga0055537_10028494 433
110 3300003791 Ga0055530_10016985 Ga0055530_100169851 433
111 3300003792 Ga0055540_1000843 Ga0055540_100084320 433
112 3300005262 Ga0065165_1002993 Ga0065165_100299313 433
113 3300013105 Ga0157369_10043567 Ga0157369_100435673 433
114 3300021384 Ga0213876_10000263 Ga0213876_1000026323 433
115 3300025245 Ga0207425_1000025 Ga0207425_1000025204 433
116 3300025258 Ga0209129_1004316 Ga0209129_10043161 433
117 3300025263 Ga0209565_1000044 Ga0209565_1000044153 433
118 3300025292 Ga0209676_1009270 Ga0209676_10092702 433
119 3300025294 Ga0209025_1000176 Ga0209025_100017639 433
120 3300025295 Ga0209564_1000886 Ga0209564_100088611 433
121 3300025297 Ga0209758_1000002 Ga0209758_1000002288 433
122 3300025297 Ga0209758_1007771 Ga0209758_10077719 433
123 3300025298 Ga0209050_1000001 Ga0209050_1000001200 433
124 3300025298 Ga0209050_1000350 Ga0209050_10003506 433
125 3300025298 Ga0209050_1022091 Ga0209050_10220913 433
126 3300025303 Ga0209051_1000919 Ga0209051_10009195 433
127 3300025304 Ga0209257_1002786 Ga0209257_10027862 433
128 3300025304 Ga0209257_1002907 Ga0209257_10029072 433
129 3300048905 Ga0496102_0102491 Ga0496102_0102491_475_1791 433
130 3300053157 Ga0500624_000008 Ga0500624_000008_145531_146838 433
131 3300053178 Ga0500637_0000071 Ga0500637_0000071_34934_36241 433
132 iso_pu_bacteria 2775507255 2778123576 433
133 3300005338 Ga0068868_100000002 Ga0068868_100000002131 434
134 3300026023 Ga0207677_10000080 Ga0207677_1000008075 434
135 3300044735 Ga0466968_0001348 Ga0466968_0001348_6520_7836 434
136 3300005327 Ga0070658_10037682 Ga0070658_100376824 435
137 3300005327 Ga0070658_10047496 Ga0070658_100474964 435
138 3300005339 Ga0070660_100012884 Ga0070660_1000128843 435
139 3300005435 Ga0070714_100175381 Ga0070714_1001753811 435
140 3300005530 Ga0070679_100027466 Ga0070679_1000274663 435
141 3300025909 Ga0207705_10015954 Ga0207705_100159544 435
142 3300025921 Ga0207652_10000474 Ga0207652_1000047440 435
143 3300026142 Ga0207698_10171513 Ga0207698_101715132 435
144 3300031852 Ga0307410_10054407 Ga0307410_100544072 435
145 3300031911 Ga0307412_10022826 Ga0307412_100228263 435
146 3300046507 Ga0495606_0002641 Ga0495606_0002641_3920_5275 435
147 3300048925 Ga0496122_0003022 Ga0496122_0003022_17081_18430 435
148 3300048926 Ga0496123_0002155 Ga0496123_0002155_14347_15696 435
149 3300049571 Ga0501034_0099121 Ga0501034_0099121_823_2145 435
150 3300005548 Ga0070665_100000195 Ga0070665_10000019539 436
151 3300005841 Ga0068863_100011726 Ga0068863_10001172610 436
152 3300020082 Ga0206353_10336504 Ga0206353_103365042 436
153 3300025931 Ga0207644_10020849 Ga0207644_100208496 436
154 3300026041 Ga0207639_10009431 Ga0207639_100094315 436
155 3300026088 Ga0207641_10010204 Ga0207641_1001020413 436
156 3300028379 Ga0268266_10000865 Ga0268266_100008657 436
157 3300053087 Ga0500643_000755 Ga0500643_000755_16085_17602 436
158 3300001904 JGI24736J21556_1001311 JGI24736J21556_10013115 437
159 3300001979 JGI24740J21852_10022698 JGI24740J21852_100226981 437
160 3300005289 Ga0065704_10098275 Ga0065704_100982752 437
161 3300005331 Ga0070670_100004726 Ga0070670_1000047263 437
162 3300005455 Ga0070663_100113868 Ga0070663_1001138681 437
163 3300005466 Ga0070685_10019387 Ga0070685_100193874 437
164 3300005535 Ga0070684_100256533 Ga0070684_1002565331 437
165 3300005614 Ga0068856_100018556 Ga0068856_1000185566 437
166 3300009093 Ga0105240_10311697 Ga0105240_103116972 437
167 3300009174 Ga0105241_10036679 Ga0105241_100366791 437
168 3300009545 Ga0105237_10018222 Ga0105237_100182228 437
169 3300009551 Ga0105238_10290453 Ga0105238_102904531 437
170 3300010375 Ga0105239_10077956 Ga0105239_100779564 437
171 3300013100 Ga0157373_10050419 Ga0157373_100504192 437
172 3300013104 Ga0157370_10043960 Ga0157370_100439605 437
173 3300025229 Ga0209147_101020 Ga0209147_1010203 437
174 3300025913 Ga0207695_10088308 Ga0207695_100883082 437
175 3300025924 Ga0207694_10019856 Ga0207694_100198569 437
176 3300025931 Ga0207644_10126410 Ga0207644_101264102 437
177 3300026041 Ga0207639_10019593 Ga0207639_100195933 437
178 3300026067 Ga0207678_10000084 Ga0207678_100000842 437
179 3300026078 Ga0207702_10008635 Ga0207702_100086354 437
180 3300031548 Ga0307408_100230490 Ga0307408_1002304902 437
181 3300031911 Ga0307412_10021658 Ga0307412_100216584 437
182 3300032002 Ga0307416_100133189 Ga0307416_1001331892 437
183 3300032005 Ga0307411_10061936 Ga0307411_100619363 437
184 3300046453 Ga0495627_000410 Ga0495627_000410_30327_31640 437
185 3300046524 Ga0495648_0007386 Ga0495648_0007386_254_1567 437
186 3300046530 Ga0495654_0050458 Ga0495654_0050458_366_1730 437
187 3300048911 Ga0496108_0005214 Ga0496108_0005214_6873_8216 437
188 3300048911 Ga0496108_0071868 Ga0496108_0071868_839_2173 437
189 3300048912 Ga0496109_0101965 Ga0496109_0101965_184_1518 437
190 3300048913 Ga0496110_0050243 Ga0496110_0050243_530_1864 437
191 3300048924 Ga0496121_0003086 Ga0496121_0003086_20387_21730 437
192 3300048926 Ga0496123_0085913 Ga0496123_0085913_523_1857 437
193 3300049705 Ga0501225_0001636 Ga0501225_0001636_1345_2679 437
194 3300049705 Ga0501225_0015186 Ga0501225_0015186_710_2044 437
195 3300053158 Ga0500627_0000458 Ga0500627_0000458_1637_3001 437

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17289

Terminase_6C

Terminase RNaseH-like domain

337

489

0.97

PF03237

Terminase_6N

Terminase large subunit, T4likevirus-type, N-terminal

118

322

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2o0k-assembly1.cif.gz_A t4 gp17 atpase domain mutant 0.7756 51 245
5c2d-assembly1.cif.gz_A k428a mutant gp2c of large terminase subunit from bacteriophage sf6 with calcium 0.7521 251 418
4znl-assembly1.cif.gz_A thermus phage p74-26 large terminase atpase domain bound to adp beryllium fluoride 0.7483 48 246
5c15-assembly1.cif.gz_A k428a mutant nuclease domain of the large terminase subunit gp2 of bacterial virus sf6 with manganese 0.7337 251 418
3c6h-assembly2.cif.gz_B crystal structure of the rb49 gp17 nuclease domain 0.7293 250 395
ID Description Score Start End Superfamily
2o0hA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8198 51 208 3.40.50.300
af_Q2FX51_17_230_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8185 50 246 3.40.50.300
4ifeA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7911 49 245 3.40.50.300
af_Q2FX51_17_230_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7561 50 246 3.40.50.300
3eo3B02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.756 314 360 3.30.420.40
ID Description Score Start End GO Terms
AF-A0A833D2U8-F1-model_v4 DNA-packaging protein 0.9736 31 194
AF-A0A494W856-F1-model_v4 ATP-binding protein 0.9698 1 436 GO:0005524
AF-A0A494W856-F1-model_v4 ATP-binding protein 0.9676 1 436 GO:0005524
AF-A0A356W395-F1-model_v4 ATP-binding protein 0.9623 40 227 GO:0005524
AF-A0A839YGH4-F1-model_v4 Phage terminase large subunit-like protein 0.9592 132 436

Feature Viewer

pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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