F300742

General Info

Members Datasets Scaffolds Average Seq Length
195 125 390 904

Family's Representative Sequence

Representative Sequence 3300050507|nmdc:mga05p37_49_c1|nmdc:mga05p37_49_c1_97105_99927
Length 940
Sequence MMAAGRIGGVAGCRVSYFSTPQGRVTQFMDLLNHATETRIEDAEDTRLQEARADNTPWKKWGPYLSERQWGTIREDYSETGNAWNYFTHDQARSRAYHWGEDGLGGISDDRQLLCFALALWNGRDPILKERLFGLTNEEGNHGEDVKEYYFYLDSTPTHSYMKYLYKYPQAAYPYSDLVLTNRKRTRLELEYELLDTGVFDTDRYFDVFVEYAKETPEEILIRISVCNRGPEAAVLHLLPTLWFRNTWSWSREPGPKPMLSARGVQSVTASHPVLGDRSLICDRPVPLLFTENETNVARVFGGSNASPYVKDGIHNCIVNGRRDAVSPDRKGTKVAAQYELTVPPGGTQVVQLRLGKRDWASPDQAFGKSFDALFETRIAEADRFYAAVIPPSLDDDSRLVMRQGLAGMLWSKQFYYYPVHKWLHDEHLPPDSPRRVPRRNEQWFHLESADIISMPDKWEYPWFAAWDLAFHCMVIARVDLDFAKDQLRLMTNQVYLHPNGQIPAYEWNFSDVNPPVHCKAVWQIYLLDKAFKGQGDLAFLESQFHKLLMNFTWWVNRKDEAGRNVFTGGFLGLDNIGVFDRSSPLPTGGTIEQADGTSWMAMFCLDMLTIALELALENPVYEELACKFFEHFVHIAAAMDRIGHNQDELWDEEDGFFYDVLRLPQGQAVRVKVRSMVGLIPIFASAILERDVLERLPVFAARVAYFVGEYPGLLKNVTDVTKPGVGGRHLLSPVSEQKLRRILARMLDESEFLSEYGIRALSRQHRDNPYVFTVGSTVYRVGYEPAESSSGLFGGNSNWRGPIWLPVNQLLIQSLRKMYSYYGNEFTVECPTGSGTKMNLWQVADELARRLCDIFLRDSRQRRPVYGSSQKFQTDPHWRDLILFYEYFHGDIGAGIGASHQTGWTGLIAWLLKSRVILKPEEVLENGYDAVALRIVRSY

Samples

Sample ID Description Type Environment
1 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
2 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
47 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
74 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
75 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
78 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
79 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
80 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
81 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
82 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
83 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
84 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
85 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
86 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
87 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
88 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
89 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
90 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
91 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
92 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
93 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
94 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
95 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
96 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
97 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
98 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
99 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
100 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
101 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
102 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
110 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
111 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
112 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
113 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
114 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
115 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
116 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
117 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
118 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
119 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
120 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
121 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
122 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
123 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
124 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
125 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.95
Metatranscriptomes 2.05
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.67
Rhizosphere 90.77
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga05p37_49_c1 3300050507 Bacteria 103776
2 Ga0058861_10072630 3300004800 Bacteria 5308
3 Ga0058862_10162030 3300004803 Bacteria 5688
4 Ga0065712_10002726 3300005290 Bacteria 5326
5 Ga0065715_10000955 3300005293 Bacteria 13812
6 Ga0065715_10006641 3300005293 Bacteria 3698
7 Ga0065715_10091537 3300005293 Bacteria 5718
8 Ga0065715_10091848 3300005293 Bacteria 5509
9 Ga0065707_10002104 3300005295 Bacteria 5633
10 Ga0070670_100024654 3300005331 Bacteria 5173
11 Ga0070666_10022471 3300005335 Bacteria 4095
12 Ga0070660_100006230 3300005339 Bacteria 8260
13 Ga0070661_100006840 3300005344 Bacteria 7862
14 Ga0070661_100017778 3300005344 Bacteria 5046
15 Ga0070669_100002718 3300005353 Bacteria 12762
16 Ga0070675_100003462 3300005354 Bacteria 11961
17 Ga0070675_100016602 3300005354 Bacteria 5845
18 Ga0070688_100001848 3300005365 Bacteria 10642
19 Ga0070713_100002844 3300005436 Bacteria 11319
20 Ga0070681_10039148 3300005458 Bacteria 4753
21 Ga0070706_100073969 3300005467 Bacteria 3155
22 Ga0070707_100041775 3300005468 Bacteria 4389
23 Ga0070707_100101143 3300005468 Bacteria 2793
24 Ga0070679_100034194 3300005530 Bacteria 5037
25 Ga0070679_100039860 3300005530 Bacteria 4670
26 Ga0070684_100000370 3300005535 Bacteria 31010
27 Ga0070697_100028351 3300005536 Bacteria 4482
28 Ga0070695_100000345 3300005545 Bacteria 23795
29 Ga0070665_100001422 3300005548 Bacteria 28055
30 Ga0070665_100007705 3300005548 Bacteria 10935
31 Ga0068855_100001749 3300005563 Bacteria 27116
32 Ga0070664_100020942 3300005564 Bacteria 5386
33 Ga0070664_100041989 3300005564 Bacteria 3861
34 Ga0068856_100094701 3300005614 Bacteria 2973
35 Ga0068864_100020691 3300005618 Bacteria 5506
36 Ga0068858_100004420 3300005842 Bacteria 13788
37 Ga0081455_10000350 3300005937 Bacteria 60604
38 Ga0081538_10000581 3300005981 Bacteria 40752
39 Ga0081538_10001341 3300005981 Bacteria 25310
40 Ga0081538_10002949 3300005981 Bacteria 16251
41 Ga0081538_10009155 3300005981 Bacteria 8304
42 Ga0068871_100012880 3300006358 Bacteria 6193
43 Ga0075428_100011873 3300006844 Bacteria 9688
44 Ga0075428_100068013 3300006844 Bacteria 3898
45 Ga0075428_100081043 3300006844 Bacteria 3542
46 Ga0075428_100099043 3300006844 Bacteria 3178
47 Ga0075430_100000038 3300006846 Bacteria 68465
48 Ga0075430_100014953 3300006846 Bacteria 6609
49 Ga0075431_100026071 3300006847 Bacteria 5994
50 Ga0075431_100089424 3300006847 Bacteria 3178
51 Ga0075433_10001227 3300006852 Bacteria 18708
52 Ga0075434_100003967 3300006871 Bacteria 13257
53 Ga0075434_100028755 3300006871 Bacteria 5466
54 Ga0075435_100000242 3300007076 Bacteria 33676
55 Ga0105240_10002189 3300009093 Bacteria 31899
56 Ga0111539_10001372 3300009094 Bacteria 32379
57 Ga0111539_10017766 3300009094 Bacteria 8805
58 Ga0111539_10056304 3300009094 Bacteria 4673
59 Ga0111539_10073672 3300009094 Bacteria 4025
60 Ga0114129_10000486 3300009147 Bacteria 48028
61 Ga0114129_10012669 3300009147 Bacteria 12006
62 Ga0114129_10012871 3300009147 Bacteria 11905
63 Ga0114129_10052461 3300009147 Bacteria 5723
64 Ga0114129_10069991 3300009147 Bacteria 4892
65 Ga0114129_10150634 3300009147 Bacteria 3184
66 Ga0105249_10000698 3300009553 Bacteria 30441
67 Ga0105249_10000719 3300009553 Bacteria 30139
68 Ga0157374_10030594 3300013296 Bacteria 4890
69 Ga0157378_10011787 3300013297 Bacteria 7653
70 Ga0163162_10001711 3300013306 Bacteria 20568
71 Ga0206352_10641571 3300020078 Bacteria 3543
72 Ga0206354_10098619 3300020081 Bacteria 3338
73 Ga0213875_10000299 3300021388 Bacteria 47637
74 Ga0207680_10033906 3300025903 Bacteria 2916
75 Ga0207645_10006281 3300025907 Bacteria 8541
76 Ga0207707_10017028 3300025912 Bacteria 6331
77 Ga0207649_10012887 3300025920 Bacteria 4656
78 Ga0207652_10031302 3300025921 Bacteria 4468
79 Ga0207650_10016447 3300025925 Bacteria 5171
80 Ga0207659_10002103 3300025926 Bacteria 11795
81 Ga0207659_10013826 3300025926 Bacteria 5186
82 Ga0207659_10038540 3300025926 Bacteria 3326
83 Ga0207659_10075221 3300025926 Bacteria 2477
84 Ga0207690_10007274 3300025932 Bacteria 6577
85 Ga0207706_10049766 3300025933 Bacteria 3703
86 Ga0207691_10006174 3300025940 Bacteria 11580
87 Ga0207691_10019511 3300025940 Bacteria 6415
88 Ga0207691_10043458 3300025940 Bacteria 4142
89 Ga0207711_10024857 3300025941 Bacteria 5025
90 Ga0207689_10002029 3300025942 Bacteria 19141
91 Ga0207667_10002924 3300025949 Bacteria 21207
92 Ga0207703_10016383 3300026035 Bacteria 5778
93 Ga0207678_10042919 3300026067 Bacteria 3915
94 Ga0207648_10073410 3300026089 Bacteria 2981
95 Ga0207683_10027626 3300026121 Bacteria 4903
96 Ga0209968_1002219 3300027526 Bacteria 2940
97 Ga0209983_1002091 3300027665 Bacteria 4399
98 Ga0209971_1000029 3300027682 Bacteria 52088
99 Ga0209966_1000515 3300027695 Bacteria 9995
100 Ga0209998_10000184 3300027717 Bacteria 22292
101 Ga0209974_10002759 3300027876 Bacteria 6368
102 Ga0207428_10008770 3300027907 Bacteria 9120
103 Ga0207428_10021969 3300027907 Bacteria 5391
104 Ga0268266_10002659 3300028379 Bacteria 18811
105 Ga0268266_10005229 3300028379 Bacteria 12199
106 Ga0268265_10019500 3300028380 Bacteria 4716
107 Ga0307508_10004326 3300031616 Bacteria 13899
108 Ga0316579_10017368 3300031691 Bacteria 3154
109 Ga0307516_10003387 3300031730 Bacteria 20548
110 Ga0395900_0059482 3300037418 Bacteria 3934
111 Ga0436364_1133550 3300037853 Bacteria 3024
112 Ga0436364_1332997 3300037853 Bacteria 379560
113 Ga0436360_0537744 3300039438 Bacteria 17458
114 Ga0436361_1070375 3300039447 Bacteria 8744
115 Ga0439460_0000387 3300042461 Bacteria 9345
116 Ga0453684_0011973 3300044712 Bacteria 14427
117 Ga0495592_0000045 3300046454 Bacteria 118163
118 Ga0495638_0008113 3300046460 Bacteria 7469
119 Ga0495662_0022790 3300046476 Bacteria 3023
120 Ga0495628_0000028 3300046516 Bacteria 126332
121 Ga0495630_0003660 3300046517 Bacteria 10715
122 Ga0495630_0005850 3300046517 Bacteria 8692
123 Ga0495586_0002838 3300046535 Bacteria 9357
124 Ga0495645_0001105 3300046543 Bacteria 18261
125 Ga0495599_0000423 3300046678 Bacteria 24178
126 Ga0495658_0006343 3300046683 Bacteria 5807
127 Ga0495589_0003691 3300046794 Bacteria 8268
128 Ga0495674_0007550 3300047319 Bacteria 10385
129 Ga0495674_0015548 3300047319 Bacteria 7111
130 Ga0495684_0022045 3300047471 Bacteria 4904
131 Ga0496102_0023014 3300048905 Bacteria 5529
132 Ga0496104_0020141 3300048907 Bacteria 6111
133 Ga0496104_0033937 3300048907 Bacteria 4757
134 Ga0496104_0066837 3300048907 Bacteria 3414
135 Ga0496105_0005607 3300048908 Bacteria 9545
136 Ga0496108_0031517 3300048911 Bacteria 4399
137 Ga0496109_0024666 3300048912 Bacteria 5348
138 Ga0496109_0044425 3300048912 Bacteria 4031
139 Ga0496110_0000061 3300048913 Bacteria 53551
140 Ga0496112_0004730 3300048915 Bacteria 11598
141 Ga0496112_0025107 3300048915 Bacteria 5718
142 Ga0496113_0013447 3300048916 Bacteria 5548
143 Ga0496115_0040162 3300048918 Bacteria 3719
144 Ga0501036_0015515 3300049572 Bacteria 6365
145 Ga0501036_0027845 3300049572 Bacteria 4778
146 Ga0501036_0080931 3300049572 Bacteria 2745
147 Ga0501038_0019638 3300049574 Bacteria 6086
148 Ga0501040_0003837 3300049576 Bacteria 9758
149 Ga0501040_0008105 3300049576 Bacteria 6824
150 Ga0501042_0000437 3300049578 Bacteria 21236
151 Ga0501042_0026083 3300049578 Bacteria 4108
152 Ga0501046_0001512 3300049580 Bacteria 22177
153 Ga0501047_0028451 3300049581 Bacteria 5389
154 Ga0501068_0009832 3300049584 Bacteria 5357
155 Ga0501071_0011521 3300049587 Bacteria 5964
156 Ga0501071_0039089 3300049587 Bacteria 3393
157 Ga0501072_0044295 3300049588 Bacteria 3499
158 Ga0501074_0006013 3300049590 Bacteria 8759
159 Ga0501075_0000980 3300049591 Bacteria 18188
160 Ga0501076_0007252 3300049592 Bacteria 8064
161 Ga0501076_0010359 3300049592 Bacteria 6914
162 Ga0501076_0016882 3300049592 Bacteria 5543
163 Ga0501077_0014074 3300049593 Bacteria 5018
164 Ga0501079_0000224 3300049741 Bacteria 33716
165 Ga0501079_0007665 3300049741 Bacteria 8171
166 Ga0501079_0007688 3300049741 Bacteria 8158
167 Ga0501079_0010866 3300049741 Bacteria 6934
168 Ga0501081_0002293 3300049743 Bacteria 12048
169 Ga0501081_0005521 3300049743 Bacteria 8165
170 Ga0501081_0022299 3300049743 Bacteria 4235
171 nmdc:mga05p37_117024_c1 3300050507 Bacteria 3276
172 nmdc:mga05p37_15149_c1 3300050507 Bacteria 8237
173 nmdc:mga05p37_669_c1 3300050507 Bacteria 37823
174 nmdc:mga05p37_7026_c1 3300050507 Bacteria 13271
175 nmdc:mga05p37_9653_c1 3300050507 Bacteria 11435
176 nmdc:mga05p37_9843_c1 3300050507 Bacteria 11348
177 nmdc:mga0qj67_12365_c1 3300050509 Bacteria 6430
178 nmdc:mga0qj67_234_c1 3300050509 Bacteria 37735
179 nmdc:mga06r32_56021_c1 3300050510 Bacteria 3783
180 nmdc:mga06r32_730_c1 3300050510 Bacteria 28814
181 nmdc:mga08y16_18158_c1 3300050511 Bacteria 7411
182 nmdc:mga08y16_3599_c1 3300050511 Bacteria 16089
183 nmdc:mga08y16_4613_c1 3300050511 Bacteria 14364
184 nmdc:mga08y16_8651_c1 3300050511 Bacteria 10677
185 nmdc:mga08y16_87354_c1 3300050511 Bacteria 3249
186 nmdc:mga0n895_16049_c1 3300050512 Bacteria 6860
187 nmdc:mga0n895_8024_c1 3300050512 Bacteria 9108
188 nmdc:mga0a205_10116_c1 3300050515 Bacteria 8657
189 nmdc:mga0a205_40752_c1 3300050515 Bacteria 4471
190 nmdc:mga0a205_4171_c1 3300050515 Bacteria 12949
191 Ga0501084_0021682 3300054114 Bacteria 5355
192 Ga0501082_0000367 3300060353 Bacteria 39868
193 Ga0501082_0002835 3300060353 Bacteria 15103
194 Ga0530510_0025687 3300061734 Bacteria 4212
195 Ga0530510_0083374 3300061734 Bacteria 2328
196 nmdc:mga05p37_49_c1
197 Ga0058861_10072630
198 Ga0058862_10162030
199 Ga0065712_10002726
200 Ga0065715_10000955
201 Ga0065715_10006641
202 Ga0065715_10091537
203 Ga0065715_10091848
204 Ga0065707_10002104
205 Ga0070670_100024654
206 Ga0070666_10022471
207 Ga0070660_100006230
208 Ga0070661_100006840
209 Ga0070661_100017778
210 Ga0070669_100002718
211 Ga0070675_100003462
212 Ga0070675_100016602
213 Ga0070688_100001848
214 Ga0070713_100002844
215 Ga0070681_10039148
216 Ga0070706_100073969
217 Ga0070707_100041775
218 Ga0070707_100101143
219 Ga0070679_100034194
220 Ga0070679_100039860
221 Ga0070684_100000370
222 Ga0070697_100028351
223 Ga0070695_100000345
224 Ga0070665_100001422
225 Ga0070665_100007705
226 Ga0068855_100001749
227 Ga0070664_100020942
228 Ga0070664_100041989
229 Ga0068856_100094701
230 Ga0068864_100020691
231 Ga0068858_100004420
232 Ga0081455_10000350
233 Ga0081538_10000581
234 Ga0081538_10001341
235 Ga0081538_10002949
236 Ga0081538_10009155
237 Ga0068871_100012880
238 Ga0075428_100011873
239 Ga0075428_100068013
240 Ga0075428_100081043
241 Ga0075428_100099043
242 Ga0075430_100000038
243 Ga0075430_100014953
244 Ga0075431_100026071
245 Ga0075431_100089424
246 Ga0075433_10001227
247 Ga0075434_100003967
248 Ga0075434_100028755
249 Ga0075435_100000242
250 Ga0105240_10002189
251 Ga0111539_10001372
252 Ga0111539_10017766
253 Ga0111539_10056304
254 Ga0111539_10073672
255 Ga0114129_10000486
256 Ga0114129_10012669
257 Ga0114129_10012871
258 Ga0114129_10052461
259 Ga0114129_10069991
260 Ga0114129_10150634
261 Ga0105249_10000698
262 Ga0105249_10000719
263 Ga0157374_10030594
264 Ga0157378_10011787
265 Ga0163162_10001711
266 Ga0206352_10641571
267 Ga0206354_10098619
268 Ga0213875_10000299
269 Ga0207680_10033906
270 Ga0207645_10006281
271 Ga0207707_10017028
272 Ga0207649_10012887
273 Ga0207652_10031302
274 Ga0207650_10016447
275 Ga0207659_10002103
276 Ga0207659_10013826
277 Ga0207659_10038540
278 Ga0207659_10075221
279 Ga0207690_10007274
280 Ga0207706_10049766
281 Ga0207691_10006174
282 Ga0207691_10019511
283 Ga0207691_10043458
284 Ga0207711_10024857
285 Ga0207689_10002029
286 Ga0207667_10002924
287 Ga0207703_10016383
288 Ga0207678_10042919
289 Ga0207648_10073410
290 Ga0207683_10027626
291 Ga0209968_1002219
292 Ga0209983_1002091
293 Ga0209971_1000029
294 Ga0209966_1000515
295 Ga0209998_10000184
296 Ga0209974_10002759
297 Ga0207428_10008770
298 Ga0207428_10021969
299 Ga0268266_10002659
300 Ga0268266_10005229
301 Ga0268265_10019500
302 Ga0307508_10004326
303 Ga0316579_10017368
304 Ga0307516_10003387
305 Ga0395900_0059482
306 Ga0436364_1133550
307 Ga0436364_1332997
308 Ga0436360_0537744
309 Ga0436361_1070375
310 Ga0439460_0000387
311 Ga0453684_0011973
312 Ga0495592_0000045
313 Ga0495638_0008113
314 Ga0495662_0022790
315 Ga0495628_0000028
316 Ga0495630_0003660
317 Ga0495630_0005850
318 Ga0495586_0002838
319 Ga0495645_0001105
320 Ga0495599_0000423
321 Ga0495658_0006343
322 Ga0495589_0003691
323 Ga0495674_0007550
324 Ga0495674_0015548
325 Ga0495684_0022045
326 Ga0496102_0023014
327 Ga0496104_0020141
328 Ga0496104_0033937
329 Ga0496104_0066837
330 Ga0496105_0005607
331 Ga0496108_0031517
332 Ga0496109_0024666
333 Ga0496109_0044425
334 Ga0496110_0000061
335 Ga0496112_0004730
336 Ga0496112_0025107
337 Ga0496113_0013447
338 Ga0496115_0040162
339 Ga0501036_0015515
340 Ga0501036_0027845
341 Ga0501036_0080931
342 Ga0501038_0019638
343 Ga0501040_0003837
344 Ga0501040_0008105
345 Ga0501042_0000437
346 Ga0501042_0026083
347 Ga0501046_0001512
348 Ga0501047_0028451
349 Ga0501068_0009832
350 Ga0501071_0011521
351 Ga0501071_0039089
352 Ga0501072_0044295
353 Ga0501074_0006013
354 Ga0501075_0000980
355 Ga0501076_0007252
356 Ga0501076_0010359
357 Ga0501076_0016882
358 Ga0501077_0014074
359 Ga0501079_0000224
360 Ga0501079_0007665
361 Ga0501079_0007688
362 Ga0501079_0010866
363 Ga0501081_0002293
364 Ga0501081_0005521
365 Ga0501081_0022299
366 nmdc:mga05p37_117024_c1
367 nmdc:mga05p37_15149_c1
368 nmdc:mga05p37_669_c1
369 nmdc:mga05p37_7026_c1
370 nmdc:mga05p37_9653_c1
371 nmdc:mga05p37_9843_c1
372 nmdc:mga0qj67_12365_c1
373 nmdc:mga0qj67_234_c1
374 nmdc:mga06r32_56021_c1
375 nmdc:mga06r32_730_c1
376 nmdc:mga08y16_18158_c1
377 nmdc:mga08y16_3599_c1
378 nmdc:mga08y16_4613_c1
379 nmdc:mga08y16_8651_c1
380 nmdc:mga08y16_87354_c1
381 nmdc:mga0n895_16049_c1
382 nmdc:mga0n895_8024_c1
383 nmdc:mga0a205_10116_c1
384 nmdc:mga0a205_40752_c1
385 nmdc:mga0a205_4171_c1
386 Ga0501084_0021682
387 Ga0501082_0000367
388 Ga0501082_0002835
389 Ga0530510_0025687
390 Ga0530510_0083374

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22422

MGH1-like_GH

Mannosylglycerate hydrolase MGH1-like glycoside hydrolase domain

461

576

0.93

PF03200

Glyco_hydro_63

Glycosyl hydrolase family 63 C-terminal domain

555

843

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
2z07-assembly2.cif.gz_B crystal structure of uncharacterized conserved protein from thermus thermophilus hb8 0.6489 432 884
8egv-assembly1.cif.gz_A co-crystal structure of chaetomium glucosidase with compound 12 0.642 12 884
2z07-assembly1.cif.gz_A crystal structure of uncharacterized conserved protein from thermus thermophilus hb8 0.6395 432 884
8ekn-assembly2.cif.gz_B co-crystal structure of chaetomium glucosidase with compound 15 0.638 12 884
8egv-assembly1.cif.gz_A co-crystal structure of chaetomium glucosidase with compound 12 0.6374 12 884
ID Description Score Start End Superfamily
af_Q5AED0_433_891_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9364 431 882 1.50.10.10
af_Q5AED0_433_891_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9206 431 882 1.50.10.10
af_Q54W38_1_362_2.70.98.40 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;Glycoside hydrolase, family 65, N-terminal domain 0.917 8 359 2.70.98.40
af_Q5AED0_9_368_2.70.98.40 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;Glycoside hydrolase, family 65, N-terminal domain 0.9085 14 366 2.70.98.40
af_Q04336_455_722_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.8989 412 668 1.50.10.10
ID Description Score Start End GO Terms
AF-A0A3C1G367-F1-model_v4 Glucosidase 0.9664 110 904 GO:0004573
GO:0009311
AF-A0A2V2SD42-F1-model_v4 deleted 0.9617 109 912
AF-A0A0C1KZI2-F1-model_v4 Glucosidase 0.9599 3 909 GO:0004573
GO:0009311
AF-A0A5R9R429-F1-model_v4 deleted 0.9594 5 897
AF-A0A846E2U8-F1-model_v4 Glucosidase 0.9581 5 323 GO:0004573
GO:0009311

Map