F300506

General Info

Members Datasets Scaffolds Average Seq Length
195 138 390 154

Family's Representative Sequence

Representative Sequence 3300045049|Ga0466959_0003715|Ga0466959_0003715_4994_5500
Length 168
Sequence VDARHRPDRHAEELAMSYAVDFDTVSTVGLESSPAAAALAGLRANEARYFKNKYDHVFTVVPASEAGSTIAWVSRILEQERGIVIAARPLEATEFQVDNIRMAYVFYENGLSINVMYTLDDGGKRAVGFKLSDGMEVPAELSSFKFARQKSKLAGTIRGSYFVIKNEY

Samples

Sample ID Description Type Environment
1 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
41 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
46 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
47 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
48 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
49 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
71 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
72 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
73 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
74 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
75 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
76 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
77 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
78 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
79 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
85 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
86 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
87 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
88 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
89 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
90 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
91 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
94 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
95 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
96 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
97 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
103 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
104 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
105 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
106 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
113 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
114 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
115 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
116 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
133 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
134 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
135 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
136 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
137 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
138 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.92
Metatranscriptomes 2.05
Isolates 1.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.51
Nodule 0
Rhizoplane 5.64
Rhizosphere 85.13
Stem 0
Stem Tuber 0
Unclassified 0.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466959_0003715 3300045049 Bacteria 10078
2 Ga0070658_10129959 3300005327 Bacteria 2098
3 Ga0070683_100084910 3300005329 Bacteria 2967
4 Ga0068869_100639671 3300005334 Bacteria 902
5 Ga0068869_101195819 3300005334 Bacteria 668
6 Ga0070682_100423022 3300005337 Bacteria 1013
7 Ga0068868_100149229 3300005338 Bacteria 1924
8 Ga0070668_100017877 3300005347 Bacteria 5320
9 Ga0070659_100393665 3300005366 Bacteria 1169
10 Ga0070714_100282814 3300005435 Bacteria 1542
11 Ga0070714_100314163 3300005435 Bacteria 1464
12 Ga0070714_100348859 3300005435 Bacteria 1390
13 Ga0070714_100569713 3300005435 Bacteria 1085
14 Ga0070713_100235237 3300005436 Bacteria 1666
15 Ga0070711_100574617 3300005439 Bacteria 938
16 Ga0068853_100329518 3300005539 Bacteria 1416
17 Ga0070686_101218809 3300005544 Bacteria 626
18 Ga0068856_100054101 3300005614 Bacteria 3958
19 Ga0068852_100740885 3300005616 Bacteria 994
20 Ga0068852_100960058 3300005616 Bacteria 873
21 Ga0068859_100091849 3300005617 Bacteria 3087
22 Ga0068859_101441296 3300005617 Bacteria 760
23 Ga0068863_100007502 3300005841 Bacteria 10669
24 Ga0068858_100001098 3300005842 Bacteria 27975
25 Ga0068858_100054637 3300005842 Bacteria 3693
26 Ga0068858_100545290 3300005842 Bacteria 1122
27 Ga0068860_100111463 3300005843 Bacteria 2616
28 Ga0068860_101589635 3300005843 Bacteria 676
29 Ga0068862_100061973 3300005844 Bacteria 3216
30 Ga0081455_10005628 3300005937 Bacteria 13684
31 Ga0081455_10472642 3300005937 Bacteria 850
32 Ga0081455_10700578 3300005937 Bacteria 645
33 Ga0070717_11009684 3300006028 Bacteria 758
34 Ga0070712_100989399 3300006175 Bacteria 727
35 Ga0075428_100207370 3300006844 Bacteria 2118
36 Ga0075430_100065433 3300006846 Bacteria 3054
37 Ga0075429_100219534 3300006880 Bacteria 1665
38 Ga0097620_100091848 3300006931 Bacteria 3087
39 Ga0097620_101440862 3300006931 Bacteria 760
40 Ga0105240_11046662 3300009093 Bacteria 871
41 Ga0111539_10516806 3300009094 Bacteria 1391
42 Ga0105245_10402090 3300009098 Bacteria 1369
43 Ga0105245_11009666 3300009098 Bacteria 877
44 Ga0105247_10001398 3300009101 Bacteria 17510
45 Ga0114129_10391947 3300009147 Bacteria 1832
46 Ga0105243_11823390 3300009148 Bacteria 640
47 Ga0105248_10000055 3300009177 Bacteria 141968
48 Ga0105238_10291115 3300009551 Bacteria 1615
49 Ga0157326_1050795 3300012513 Bacteria 609
50 Ga0157371_10667548 3300013102 Bacteria 777
51 Ga0157369_10313763 3300013105 Bacteria 1630
52 Ga0163162_10194680 3300013306 Bacteria 2156
53 Ga0157380_10812456 3300014326 Bacteria 953
54 Ga0157380_11883445 3300014326 Bacteria 658
55 Ga0182008_10023867 3300014497 Bacteria 3118
56 Ga0157379_10001555 3300014968 Bacteria 18888
57 Ga0157379_10168023 3300014968 Bacteria 1980
58 Ga0157376_11966516 3300014969 Bacteria 622
59 Ga0157376_12099902 3300014969 Bacteria 603
60 Ga0197907_10494453 3300020069 Bacteria 635
61 Ga0206355_1247465 3300020076 Bacteria 704
62 Ga0154015_1070229 3300020610 Bacteria 1111
63 Ga0213876_10322678 3300021384 Bacteria 821
64 Ga0213875_10122796 3300021388 Bacteria 1214
65 Ga0213875_10240772 3300021388 Bacteria 853
66 Ga0207710_10000044 3300025900 Bacteria 211820
67 Ga0207695_10062666 3300025913 Bacteria 3838
68 Ga0207695_10071121 3300025913 Bacteria 3553
69 Ga0207649_10377876 3300025920 Bacteria 1055
70 Ga0207700_11142496 3300025928 Bacteria 696
71 Ga0207700_11771542 3300025928 Bacteria 543
72 Ga0207690_10137467 3300025932 Bacteria 1796
73 Ga0207686_10668521 3300025934 Bacteria 823
74 Ga0207711_10000030 3300025941 Bacteria 206250
75 Ga0207661_10511173 3300025944 Bacteria 1098
76 Ga0207679_11974760 3300025945 Bacteria 531
77 Ga0207667_10290571 3300025949 Bacteria 1670
78 Ga0207668_10065908 3300025972 Bacteria 2565
79 Ga0207668_10081530 3300025972 Bacteria 2347
80 Ga0207677_10077126 3300026023 Bacteria 2376
81 Ga0207677_10776618 3300026023 Bacteria 856
82 Ga0207703_10000012 3300026035 Bacteria 310717
83 Ga0207703_10095214 3300026035 Bacteria 2512
84 Ga0207703_10777466 3300026035 Bacteria 913
85 Ga0207639_11338179 3300026041 Bacteria 672
86 Ga0207708_10166719 3300026075 Bacteria 1742
87 Ga0207641_10003205 3300026088 Bacteria 14643
88 Ga0207641_10189870 3300026088 Bacteria 1888
89 Ga0207674_10717883 3300026116 Bacteria 965
90 Ga0207698_10709915 3300026142 Bacteria 1001
91 Ga0268266_10353268 3300028379 Bacteria 1382
92 Ga0268265_10302749 3300028380 Bacteria 1440
93 Ga0268264_10680443 3300028381 Bacteria 1020
94 Ga0307515_10025514 3300028794 Bacteria 10220
95 Ga0265760_10029341 3300031090 Bacteria 1617
96 Ga0307507_10064626 3300033179 Bacteria 3374
97 Ga0307510_10094073 3300033180 Bacteria 2824
98 Ga0373950_0014063 3300034818 Bacteria 1343
99 Ga0373940_0014454 3300035088 Bacteria 1926
100 Ga0373941_0020894 3300035115 Bacteria 1841
101 Ga0373942_0003223 3300035207 Bacteria 3856
102 Ga0373931_0734479 3300035691 Bacteria 654
103 Ga0373935_0002306 3300035692 Bacteria 10887
104 Ga0395900_0578632 3300037418 Bacteria 1065
105 Ga0395898_0043021 3300037466 Bacteria 4452
106 Ga0436364_0080359 3300037853 Bacteria 917
107 Ga0436364_0194980 3300037853 Bacteria 915
108 Ga0395901_0023128 3300038443 Bacteria 6371
109 Ga0436365_0042802 3300039437 Bacteria 873
110 Ga0436365_0732031 3300039437 Bacteria 1672
111 Ga0436360_0089975 3300039438 Bacteria 579
112 Ga0436360_0486288 3300039438 Bacteria 1327
113 Ga0436360_1067662 3300039438 Bacteria 1726
114 Ga0436360_1150442 3300039438 Bacteria 883
115 Ga0436361_0941258 3300039447 Bacteria 1839
116 Ga0436363_0820980 3300039450 Bacteria 554
117 Ga0436363_1127431 3300039450 Bacteria 643
118 Ga0436362_1039697 3300039453 Bacteria 625
119 Ga0436362_1229233 3300039453 Bacteria 887
120 Ga0451793_1713625 3300041452 Bacteria 726
121 Ga0466969_0012309 3300044656 Bacteria 4513
122 Ga0466965_0522506 3300044683 Bacteria 668
123 Ga0466966_0009629 3300044684 Bacteria 6394
124 Ga0466966_0338479 3300044684 Bacteria 904
125 Ga0466966_0831883 3300044684 Bacteria 557
126 Ga0466961_0246881 3300044693 Bacteria 1096
127 Ga0466961_0622799 3300044693 Bacteria 648
128 Ga0466961_0664361 3300044693 Bacteria 625
129 Ga0466963_0034062 3300044694 Bacteria 3312
130 Ga0466963_0491012 3300044694 Unclassified 867
131 Ga0466971_0303980 3300044719 Bacteria 766
132 Ga0466970_0012042 3300044765 Bacteria 4418
133 Ga0466970_0067988 3300044765 Bacteria 1914
134 Ga0466957_0230564 3300044842 Bacteria 1226
135 Ga0466960_0132511 3300044901 Bacteria 1317
136 Ga0466960_0245417 3300044901 Bacteria 993
137 Ga0466959_0088809 3300045049 Bacteria 2222
138 Ga0466958_0087687 3300045836 Bacteria 1922
139 Ga0466958_0226666 3300045836 Bacteria 1193
140 Ga0466958_0307728 3300045836 Bacteria 1018
141 Ga0466967_0007166 3300045976 Bacteria 8009
142 Ga0466967_0160680 3300045976 Bacteria 2108
143 Ga0466967_0165125 3300045976 Bacteria 2080
144 Ga0466967_0411213 3300045976 Bacteria 1317
145 Ga0466967_1229666 3300045976 Bacteria 746
146 Ga0466967_2600650 3300045976 Bacteria 501
147 Ga0495628_0319806 3300046516 Bacteria 1145
148 Ga0495652_0128858 3300046529 Bacteria 2006
149 Ga0495676_0389957 3300047321 Bacteria 926
150 Ga0495614_0602430 3300048089 Bacteria 528
151 Ga0496100_1338474 3300048903 Bacteria 565
152 Ga0496104_0195993 3300048907 Bacteria 1932
153 Ga0496104_0553378 3300048907 Bacteria 1061
154 Ga0496108_1415780 3300048911 Bacteria 581
155 Ga0496108_1568357 3300048911 Bacteria 546
156 Ga0496109_0065824 3300048912 Bacteria 3318
157 Ga0496110_0204174 3300048913 Bacteria 1796
158 Ga0496111_1112088 3300048914 Bacteria 563
159 Ga0496112_0253817 3300048915 Bacteria 1709
160 Ga0496113_0427708 3300048916 Bacteria 1064
161 Ga0496117_0006511 3300048920 Bacteria 11776
162 Ga0496117_0030797 3300048920 Bacteria 4108
163 Ga0496118_0018313 3300048921 Bacteria 6323
164 Ga0496118_0043256 3300048921 Bacteria 3543
165 Ga0496119_0011372 3300048922 Bacteria 7382
166 Ga0501031_0032211 3300049568 Bacteria 3418
167 Ga0501032_0014098 3300049569 Bacteria 5668
168 Ga0501034_0342683 3300049571 Bacteria 1424
169 Ga0501034_0431342 3300049571 Bacteria 1238
170 Ga0501036_0749750 3300049572 Bacteria 805
171 Ga0501037_0109033 3300049573 Bacteria 1995
172 Ga0501038_0000544 3300049574 Bacteria 33088
173 Ga0501039_0261295 3300049575 Bacteria 1361
174 Ga0501043_0615367 3300049579 Bacteria 801
175 Ga0501047_0251691 3300049581 Bacteria 1615
176 Ga0501048_0000855 3300049582 Bacteria 22442
177 Ga0501070_0032052 3300049586 Bacteria 4400
178 Ga0501070_0032194 3300049586 Bacteria 4389
179 Ga0501070_0065151 3300049586 Bacteria 3017
180 Ga0501070_0861029 3300049586 Bacteria 709
181 Ga0501073_0099658 3300049589 Bacteria 2017
182 Ga0501074_0001044 3300049590 Bacteria 18032
183 Ga0501074_0420448 3300049590 Bacteria 948
184 Ga0501079_0019834 3300049741 Bacteria 5137
185 Ga0501080_0185916 3300049742 Bacteria 1910
186 Ga0501080_0270978 3300049742 Bacteria 1545
187 Ga0501044_0089043 3300049823 Bacteria 3116
188 Ga0501044_0190170 3300049823 Bacteria 2016
189 nmdc:mga09592_226018_c1 3300050508 Bacteria 1622
190 nmdc:mga06r32_34363_c1 3300050510 Bacteria 4781
191 nmdc:mga08y16_844565_c1 3300050511 Bacteria 905
192 Ga0500646_0022193 3300053090 Bacteria 1697
193 Ga0501084_0103149 3300054114 Bacteria 2395
194 2552111253 2551306166 Bacteria 9731570
195 2904431001 2904430863 Bacteria 3486923
196 Ga0466959_0003715
197 Ga0070658_10129959
198 Ga0070683_100084910
199 Ga0068869_100639671
200 Ga0068869_101195819
201 Ga0070682_100423022
202 Ga0068868_100149229
203 Ga0070668_100017877
204 Ga0070659_100393665
205 Ga0070714_100282814
206 Ga0070714_100314163
207 Ga0070714_100348859
208 Ga0070714_100569713
209 Ga0070713_100235237
210 Ga0070711_100574617
211 Ga0068853_100329518
212 Ga0070686_101218809
213 Ga0068856_100054101
214 Ga0068852_100740885
215 Ga0068852_100960058
216 Ga0068859_100091849
217 Ga0068859_101441296
218 Ga0068863_100007502
219 Ga0068858_100001098
220 Ga0068858_100054637
221 Ga0068858_100545290
222 Ga0068860_100111463
223 Ga0068860_101589635
224 Ga0068862_100061973
225 Ga0081455_10005628
226 Ga0081455_10472642
227 Ga0081455_10700578
228 Ga0070717_11009684
229 Ga0070712_100989399
230 Ga0075428_100207370
231 Ga0075430_100065433
232 Ga0075429_100219534
233 Ga0097620_100091848
234 Ga0097620_101440862
235 Ga0105240_11046662
236 Ga0111539_10516806
237 Ga0105245_10402090
238 Ga0105245_11009666
239 Ga0105247_10001398
240 Ga0114129_10391947
241 Ga0105243_11823390
242 Ga0105248_10000055
243 Ga0105238_10291115
244 Ga0157326_1050795
245 Ga0157371_10667548
246 Ga0157369_10313763
247 Ga0163162_10194680
248 Ga0157380_10812456
249 Ga0157380_11883445
250 Ga0182008_10023867
251 Ga0157379_10001555
252 Ga0157379_10168023
253 Ga0157376_11966516
254 Ga0157376_12099902
255 Ga0197907_10494453
256 Ga0206355_1247465
257 Ga0154015_1070229
258 Ga0213876_10322678
259 Ga0213875_10122796
260 Ga0213875_10240772
261 Ga0207710_10000044
262 Ga0207695_10062666
263 Ga0207695_10071121
264 Ga0207649_10377876
265 Ga0207700_11142496
266 Ga0207700_11771542
267 Ga0207690_10137467
268 Ga0207686_10668521
269 Ga0207711_10000030
270 Ga0207661_10511173
271 Ga0207679_11974760
272 Ga0207667_10290571
273 Ga0207668_10065908
274 Ga0207668_10081530
275 Ga0207677_10077126
276 Ga0207677_10776618
277 Ga0207703_10000012
278 Ga0207703_10095214
279 Ga0207703_10777466
280 Ga0207639_11338179
281 Ga0207708_10166719
282 Ga0207641_10003205
283 Ga0207641_10189870
284 Ga0207674_10717883
285 Ga0207698_10709915
286 Ga0268266_10353268
287 Ga0268265_10302749
288 Ga0268264_10680443
289 Ga0307515_10025514
290 Ga0265760_10029341
291 Ga0307507_10064626
292 Ga0307510_10094073
293 Ga0373950_0014063
294 Ga0373940_0014454
295 Ga0373941_0020894
296 Ga0373942_0003223
297 Ga0373931_0734479
298 Ga0373935_0002306
299 Ga0395900_0578632
300 Ga0395898_0043021
301 Ga0436364_0080359
302 Ga0436364_0194980
303 Ga0395901_0023128
304 Ga0436365_0042802
305 Ga0436365_0732031
306 Ga0436360_0089975
307 Ga0436360_0486288
308 Ga0436360_1067662
309 Ga0436360_1150442
310 Ga0436361_0941258
311 Ga0436363_0820980
312 Ga0436363_1127431
313 Ga0436362_1039697
314 Ga0436362_1229233
315 Ga0451793_1713625
316 Ga0466969_0012309
317 Ga0466965_0522506
318 Ga0466966_0009629
319 Ga0466966_0338479
320 Ga0466966_0831883
321 Ga0466961_0246881
322 Ga0466961_0622799
323 Ga0466961_0664361
324 Ga0466963_0034062
325 Ga0466963_0491012
326 Ga0466971_0303980
327 Ga0466970_0012042
328 Ga0466970_0067988
329 Ga0466957_0230564
330 Ga0466960_0132511
331 Ga0466960_0245417
332 Ga0466959_0088809
333 Ga0466958_0087687
334 Ga0466958_0226666
335 Ga0466958_0307728
336 Ga0466967_0007166
337 Ga0466967_0160680
338 Ga0466967_0165125
339 Ga0466967_0411213
340 Ga0466967_1229666
341 Ga0466967_2600650
342 Ga0495628_0319806
343 Ga0495652_0128858
344 Ga0495676_0389957
345 Ga0495614_0602430
346 Ga0496100_1338474
347 Ga0496104_0195993
348 Ga0496104_0553378
349 Ga0496108_1415780
350 Ga0496108_1568357
351 Ga0496109_0065824
352 Ga0496110_0204174
353 Ga0496111_1112088
354 Ga0496112_0253817
355 Ga0496113_0427708
356 Ga0496117_0006511
357 Ga0496117_0030797
358 Ga0496118_0018313
359 Ga0496118_0043256
360 Ga0496119_0011372
361 Ga0501031_0032211
362 Ga0501032_0014098
363 Ga0501034_0342683
364 Ga0501034_0431342
365 Ga0501036_0749750
366 Ga0501037_0109033
367 Ga0501038_0000544
368 Ga0501039_0261295
369 Ga0501043_0615367
370 Ga0501047_0251691
371 Ga0501048_0000855
372 Ga0501070_0032052
373 Ga0501070_0032194
374 Ga0501070_0065151
375 Ga0501070_0861029
376 Ga0501073_0099658
377 Ga0501074_0001044
378 Ga0501074_0420448
379 Ga0501079_0019834
380 Ga0501080_0185916
381 Ga0501080_0270978
382 Ga0501044_0089043
383 Ga0501044_0190170
384 nmdc:mga09592_226018_c1
385 nmdc:mga06r32_34363_c1
386 nmdc:mga08y16_844565_c1
387 Ga0500646_0022193
388 Ga0501084_0103149
389 2552111253
390 2904431001

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
1sng-assembly1.cif.gz_A structure of a thermophilic serpin in the native state 0.7186 72 103
6b9o-assembly1.cif.gz_A structure of gh 38 jack bean alpha-mannosidase 0.706 78 123
6b9p-assembly1.cif.gz_A structure of gh 38 jack bean alpha-mannosidase in complex with a 36-valent iminosugar cluster inhibitor 0.702 77 119
7n84-assembly1.cif.gz_a double nuclear outer ring from the isolated yeast npc 0.6776 77 106
5duq-assembly1.cif.gz_A active human c1-inhibitor in complex with dextran sulfate 0.6749 72 103
ID Description Score Start End Superfamily
af_O09159_605_867_2.70.98.30 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;Golgi alpha-mannosidase II; domain 4 0.7587 77 117 2.70.98.30
af_P47107_732_1038_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7527 77 122 2.130.10.10
af_Q5N9R6_457_606_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.743 69 106 2.130.10.10
af_Q9VKV2_542_803_2.70.98.30 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;Golgi alpha-mannosidase II; domain 4 0.7429 77 119 2.70.98.30
af_P34098_599_856_2.70.98.30 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;Golgi alpha-mannosidase II; domain 4 0.7416 77 118 2.70.98.30
ID Description Score Start End GO Terms
AF-R8CGM5-F1-model_v4 Uncharacterized protein 0.9966 4 104
AF-F5XGY5-F1-model_v4 Phage tail protein 0.9894 1 154
AF-A0A521VY78-F1-model_v4 Phage tail protein 0.9869 1 154
AF-A0A0F2S9W5-F1-model_v4 Phage tail protein 0.9866 24 154
AF-A0A365D6U3-F1-model_v4 Glycoside hydrolase 0.9853 1 154 GO:0004553
GO:0005975

Map