F300411

General Info

Members Datasets Scaffolds Average Seq Length
195 119 390 422

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0102626|Ga0436364_0102626_7114_8544
Length 476
Sequence MPSARPLRNGSRSSHLPVGGGQPGGRRDRRDPPEDQKPEVRRDLISTKLIELEVPRERAVLVGAPQKGLLQQLADEHLEELARLTDTAGPDVVGTLTQRIDKPNPKFFIGEGKAEELKQLVAESEATLIIFDDELSPAQGRNLEEFVGTRVMDRAELILDIFATRARSSEARAQVELAQLQYLRPRLTRMWTHLSRVRGGVGMRGPGETQLETDRRMIDHRIARLKDELERVAQQRATQRKGREGVLRVSLVGYTNAGKSSVLRGLSGSEVFVEDRLFATLDPTTRAVEVGEGAEVLLTDTVGFIRKLPHHLVASFRATLEEAREADLLLHVIDSSHPGWEEQKSVVEEVLADLGLQESPVVLVFNKVDRLTHAEEEGLRARSQTYEGTPAVFTSTVEPSGLDPLRELLLQRVREMRPDVRITLSSSQGGVLAEIYREGEVLERQDNGSEINLRARLPASTLGRLRSRGVRIYGGA

Samples

Sample ID Description Type Environment
1 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
61 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
62 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
63 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
64 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
65 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
66 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
67 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
68 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
69 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
70 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
71 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
72 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
73 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
74 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
75 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
76 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
77 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
78 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
79 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
80 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
81 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
82 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
83 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
84 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
85 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
86 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
93 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
94 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
95 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
96 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
97 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
98 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
99 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
100 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
101 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
102 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
103 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
104 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
105 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
106 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
107 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
108 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
110 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
111 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
112 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
113 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
114 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
115 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
116 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
117 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
118 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
119 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.51
Nodule 0
Rhizoplane 1.03
Rhizosphere 96.92
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436364_0102626 3300037853 Bacteria 10661
2 Ga0070676_10069831 3300005328 Bacteria 2106
3 Ga0070680_100002393 3300005336 Bacteria 13882
4 Ga0070668_100032788 3300005347 Bacteria 3952
5 Ga0070675_100053667 3300005354 Bacteria 3315
6 Ga0070675_100078138 3300005354 Bacteria 2755
7 Ga0070671_100021364 3300005355 Bacteria 5285
8 Ga0070674_100080258 3300005356 Bacteria 2329
9 Ga0070673_100099587 3300005364 Bacteria 2391
10 Ga0070659_100066319 3300005366 Bacteria 2860
11 Ga0070667_100129534 3300005367 Bacteria 2201
12 Ga0070703_10000710 3300005406 Bacteria 11241
13 Ga0070709_10001047 3300005434 Bacteria 15304
14 Ga0070714_100022387 3300005435 Bacteria 5182
15 Ga0070701_10058349 3300005438 Bacteria 2025
16 Ga0070711_100000286 3300005439 Bacteria 26221
17 Ga0070705_100015718 3300005440 Bacteria 3918
18 Ga0070705_100147953 3300005440 Bacteria 1554
19 Ga0070694_100012872 3300005444 Bacteria 5216
20 Ga0070694_100028892 3300005444 Bacteria 3613
21 Ga0070694_100063525 3300005444 Bacteria 2525
22 Ga0070708_100010842 3300005445 Bacteria 7403
23 Ga0070708_100014604 3300005445 Bacteria 6468
24 Ga0070708_100031574 3300005445 Bacteria 4586
25 Ga0070708_100036836 3300005445 Bacteria 4267
26 Ga0068867_100085725 3300005459 Bacteria 2382
27 Ga0070706_100029496 3300005467 Bacteria 5054
28 Ga0070707_100015655 3300005468 Bacteria 7119
29 Ga0070698_100007097 3300005471 Bacteria 12134
30 Ga0070699_100000830 3300005518 Bacteria 28605
31 Ga0070699_100001003 3300005518 Bacteria 26263
32 Ga0070699_100014383 3300005518 Bacteria 6803
33 Ga0070699_100069172 3300005518 Bacteria 3068
34 Ga0070699_100144209 3300005518 Bacteria 2104
35 Ga0070679_100103979 3300005530 Bacteria 2826
36 Ga0070697_100036989 3300005536 Bacteria 3943
37 Ga0070697_100075268 3300005536 Bacteria 2774
38 Ga0070672_100012290 3300005543 Bacteria 6003
39 Ga0070672_100033543 3300005543 Bacteria 3888
40 Ga0070695_100035789 3300005545 Bacteria 3120
41 Ga0070665_100000624 3300005548 Bacteria 48293
42 Ga0070704_100009250 3300005549 Bacteria 5946
43 Ga0068857_100005788 3300005577 Bacteria 10561
44 Ga0068857_100007543 3300005577 Bacteria 9362
45 Ga0068864_100001393 3300005618 Bacteria 20031
46 Ga0075428_100318092 3300006844 Bacteria 1672
47 Ga0075433_10022142 3300006852 Bacteria 5335
48 Ga0075433_10277265 3300006852 Bacteria 1486
49 Ga0075434_100022597 3300006871 Bacteria 6125
50 Ga0075434_100109146 3300006871 Bacteria 2777
51 Ga0075434_100196020 3300006871 Bacteria 2040
52 Ga0075436_100002794 3300006914 Bacteria 11959
53 Ga0075436_100011566 3300006914 Bacteria 6053
54 Ga0075436_100051975 3300006914 Bacteria 2828
55 Ga0075436_100131443 3300006914 Bacteria 1756
56 Ga0075435_100167246 3300007076 Bacteria 1854
57 Ga0099794_10000143 3300007265 Bacteria 26522
58 Ga0111539_10276816 3300009094 Bacteria 1953
59 Ga0105245_10063991 3300009098 Bacteria 3323
60 Ga0105248_10034740 3300009177 Bacteria 5641
61 Ga0105239_10027907 3300010375 Bacteria 6211
62 Ga0157369_10074419 3300013105 Bacteria 3642
63 Ga0207653_10000143 3300025885 Bacteria 50815
64 Ga0207699_10009452 3300025906 Bacteria 4855
65 Ga0207699_10016431 3300025906 Bacteria 3872
66 Ga0207684_10033258 3300025910 Bacteria 4384
67 Ga0207707_10014917 3300025912 Bacteria 6767
68 Ga0207707_10144778 3300025912 Bacteria 2077
69 Ga0207707_10146215 3300025912 Bacteria 2066
70 Ga0207663_10000038 3300025916 Bacteria 84886
71 Ga0207662_10006529 3300025918 Bacteria 6303
72 Ga0207659_10102380 3300025926 Bacteria 2162
73 Ga0207659_10111923 3300025926 Bacteria 2077
74 Ga0207644_10007639 3300025931 Bacteria 7051
75 Ga0207691_10004910 3300025940 Bacteria 12912
76 Ga0207691_10016057 3300025940 Bacteria 7112
77 Ga0207711_10086035 3300025941 Bacteria 2755
78 Ga0207661_10028006 3300025944 Bacteria 4311
79 Ga0207651_10071292 3300025960 Bacteria 2462
80 Ga0207668_10090955 3300025972 Bacteria 2241
81 Ga0207676_10011624 3300026095 Bacteria 6294
82 Ga0207674_10000873 3300026116 Bacteria 39449
83 Ga0207674_10009943 3300026116 Bacteria 10822
84 Ga0209588_1004558 3300027671 Bacteria 3916
85 Ga0268266_10000771 3300028379 Bacteria 42872
86 Ga0265316_10000576 3300031344 Bacteria 41017
87 Ga0307408_100022093 3300031548 Bacteria 4317
88 Ga0307405_10025818 3300031731 Bacteria 3378
89 Ga0307413_10006064 3300031824 Bacteria 5476
90 Ga0307413_10009153 3300031824 Bacteria 4724
91 Ga0307413_10022543 3300031824 Bacteria 3396
92 Ga0307413_10031721 3300031824 Bacteria 2985
93 Ga0307413_10078998 3300031824 Bacteria 2101
94 Ga0307410_10011677 3300031852 Bacteria 5036
95 Ga0307410_10016650 3300031852 Bacteria 4392
96 Ga0307410_10020610 3300031852 Bacteria 4036
97 Ga0307410_10055994 3300031852 Bacteria 2679
98 Ga0307406_10010311 3300031901 Bacteria 5266
99 Ga0307406_10036901 3300031901 Bacteria 3014
100 Ga0307407_10014963 3300031903 Bacteria 3816
101 Ga0307407_10016346 3300031903 Bacteria 3693
102 Ga0307407_10069430 3300031903 Bacteria 2091
103 Ga0307407_10113239 3300031903 Bacteria 1707
104 Ga0307409_100027791 3300031995 Bacteria 4017
105 Ga0307409_100031112 3300031995 Bacteria 3846
106 Ga0307409_100114618 3300031995 Bacteria 2268
107 Ga0307409_100126345 3300031995 Bacteria 2176
108 Ga0307416_100021679 3300032002 Bacteria 4619
109 Ga0307416_100156182 3300032002 Bacteria 2101
110 Ga0307416_100258394 3300032002 Bacteria 1700
111 Ga0307414_10010747 3300032004 Bacteria 5333
112 Ga0307414_10013687 3300032004 Bacteria 4839
113 Ga0307414_10068343 3300032004 Bacteria 2549
114 Ga0307411_10002697 3300032005 Bacteria 7967
115 Ga0307411_10004258 3300032005 Bacteria 6817
116 Ga0307411_10082761 3300032005 Bacteria 2214
117 Ga0307415_100027808 3300032126 Bacteria 3588
118 Ga0307415_100145631 3300032126 Bacteria 1815
119 Ga0316582_0123715 3300036647 Bacteria 1733
120 Ga0395901_0027207 3300038443 Bacteria 5875
121 Ga0400489_16079 3300039093 Bacteria 15589
122 Ga0451839_1171757 3300041496 Bacteria 2019
123 Ga0451577_0001279 3300042876 Bacteria 34616
124 Ga0451577_0012237 3300042876 Bacteria 8062
125 Ga0451577_0213954 3300042876 Bacteria 1742
126 Ga0453683_0021992 3300044673 Bacteria 4069
127 Ga0453684_0002637 3300044712 Bacteria 42868
128 Ga0453684_0004189 3300044712 Bacteria 31045
129 Ga0451576_0083150 3300045051 Bacteria 3330
130 Ga0451576_0222542 3300045051 Bacteria 1970
131 Ga0495643_0000013 3300046522 Bacteria 315700
132 Ga0495613_0055701 3300046689 Bacteria 2904
133 Ga0495674_0055205 3300047319 Bacteria 3485
134 Ga0495684_0010369 3300047471 Bacteria 7207
135 Ga0496102_0219362 3300048905 Bacteria 1792
136 Ga0496104_0053821 3300048907 Bacteria 3804
137 Ga0501034_0021122 3300049571 Bacteria 6642
138 Ga0501039_0048476 3300049575 Bacteria 3284
139 Ga0501040_0010402 3300049576 Bacteria 6082
140 Ga0501042_0121651 3300049578 Bacteria 1879
141 Ga0501046_0021050 3300049580 Bacteria 5385
142 Ga0501046_0042637 3300049580 Bacteria 3617
143 Ga0501048_0073002 3300049582 Bacteria 2422
144 Ga0501048_0126086 3300049582 Bacteria 1810
145 Ga0501067_0000489 3300049583 Bacteria 21677
146 Ga0501069_0000487 3300049585 Bacteria 18144
147 Ga0501070_0002433 3300049586 Bacteria 16328
148 Ga0501070_0115948 3300049586 Bacteria 2212
149 Ga0501071_0000837 3300049587 Bacteria 16486
150 Ga0501074_0007672 3300049590 Bacteria 7812
151 Ga0501074_0090221 3300049590 Bacteria 2195
152 Ga0501075_0014432 3300049591 Bacteria 5661
153 Ga0501075_0015958 3300049591 Bacteria 5401
154 Ga0501076_0120927 3300049592 Bacteria 2120
155 Ga0501077_0003434 3300049593 Bacteria 9524
156 Ga0501077_0007505 3300049593 Bacteria 6727
157 Ga0501209_014875 3300049656 Bacteria 1721
158 Ga0501247_002675 3300049677 Bacteria 1866
159 Ga0501249_003686 3300049679 Bacteria 3087
160 Ga0501079_0012201 3300049741 Bacteria 6561
161 Ga0501079_0034508 3300049741 Bacteria 3893
162 Ga0501079_0054752 3300049741 Bacteria 3077
163 Ga0501080_0006446 3300049742 Bacteria 10538
164 Ga0501080_0032539 3300049742 Bacteria 4865
165 Ga0501080_0113081 3300049742 Bacteria 2517
166 Ga0501080_0143636 3300049742 Bacteria 2206
167 Ga0501080_0228496 3300049742 Bacteria 1701
168 Ga0501081_0002247 3300049743 Bacteria 12145
169 Ga0501081_0074647 3300049743 Bacteria 2366
170 Ga0501081_0129077 3300049743 Bacteria 1805
171 Ga0501268_002132 3300049765 Bacteria 2572
172 Ga0501270_000949 3300049767 Bacteria 2649
173 Ga0501035_0059005 3300049822 Bacteria 3418
174 Ga0501045_0096493 3300049824 Bacteria 2187
175 Ga0501045_0111515 3300049824 Bacteria 2028
176 nmdc:mga05p37_207195_c1 3300050507 Bacteria 2371
177 nmdc:mga0n895_154464_c1 3300050512 Bacteria 2325
178 nmdc:mga0n895_41068_c1 3300050512 Bacteria 4496
179 nmdc:mga0n895_53928_c1 3300050512 Bacteria 3953
180 nmdc:mga0n895_7622_c1 3300050512 Bacteria 9306
181 nmdc:mga0rr50_66904_c1 3300050513 Bacteria 2728
182 nmdc:mga0rr50_79949_c1 3300050513 Bacteria 2519
183 nmdc:mga08x19_16467_c1 3300050514 Bacteria 4510
184 nmdc:mga08x19_38068_c1 3300050514 Bacteria 3054
185 nmdc:mga0a205_6199_c1 3300050515 Bacteria 10793
186 Ga0500628_000294 3300053129 Bacteria 9563
187 Ga0501084_0009920 3300054114 Bacteria 7872
188 Ga0501084_0021371 3300054114 Bacteria 5393
189 Ga0501084_0055751 3300054114 Bacteria 3307
190 Ga0501084_0127037 3300054114 Bacteria 2146
191 Ga0590071_016531 3300059421 Bacteria 1730
192 Ga0501082_0009616 3300060353 Bacteria 8323
193 Ga0501082_0084729 3300060353 Bacteria 2733
194 Ga0530510_0049502 3300061734 Bacteria 3036
195 Ga0530510_0215817 3300061734 Bacteria 1425
196 Ga0436364_0102626
197 Ga0070676_10069831
198 Ga0070680_100002393
199 Ga0070668_100032788
200 Ga0070675_100053667
201 Ga0070675_100078138
202 Ga0070671_100021364
203 Ga0070674_100080258
204 Ga0070673_100099587
205 Ga0070659_100066319
206 Ga0070667_100129534
207 Ga0070703_10000710
208 Ga0070709_10001047
209 Ga0070714_100022387
210 Ga0070701_10058349
211 Ga0070711_100000286
212 Ga0070705_100015718
213 Ga0070705_100147953
214 Ga0070694_100012872
215 Ga0070694_100028892
216 Ga0070694_100063525
217 Ga0070708_100010842
218 Ga0070708_100014604
219 Ga0070708_100031574
220 Ga0070708_100036836
221 Ga0068867_100085725
222 Ga0070706_100029496
223 Ga0070707_100015655
224 Ga0070698_100007097
225 Ga0070699_100000830
226 Ga0070699_100001003
227 Ga0070699_100014383
228 Ga0070699_100069172
229 Ga0070699_100144209
230 Ga0070679_100103979
231 Ga0070697_100036989
232 Ga0070697_100075268
233 Ga0070672_100012290
234 Ga0070672_100033543
235 Ga0070695_100035789
236 Ga0070665_100000624
237 Ga0070704_100009250
238 Ga0068857_100005788
239 Ga0068857_100007543
240 Ga0068864_100001393
241 Ga0075428_100318092
242 Ga0075433_10022142
243 Ga0075433_10277265
244 Ga0075434_100022597
245 Ga0075434_100109146
246 Ga0075434_100196020
247 Ga0075436_100002794
248 Ga0075436_100011566
249 Ga0075436_100051975
250 Ga0075436_100131443
251 Ga0075435_100167246
252 Ga0099794_10000143
253 Ga0111539_10276816
254 Ga0105245_10063991
255 Ga0105248_10034740
256 Ga0105239_10027907
257 Ga0157369_10074419
258 Ga0207653_10000143
259 Ga0207699_10009452
260 Ga0207699_10016431
261 Ga0207684_10033258
262 Ga0207707_10014917
263 Ga0207707_10144778
264 Ga0207707_10146215
265 Ga0207663_10000038
266 Ga0207662_10006529
267 Ga0207659_10102380
268 Ga0207659_10111923
269 Ga0207644_10007639
270 Ga0207691_10004910
271 Ga0207691_10016057
272 Ga0207711_10086035
273 Ga0207661_10028006
274 Ga0207651_10071292
275 Ga0207668_10090955
276 Ga0207676_10011624
277 Ga0207674_10000873
278 Ga0207674_10009943
279 Ga0209588_1004558
280 Ga0268266_10000771
281 Ga0265316_10000576
282 Ga0307408_100022093
283 Ga0307405_10025818
284 Ga0307413_10006064
285 Ga0307413_10009153
286 Ga0307413_10022543
287 Ga0307413_10031721
288 Ga0307413_10078998
289 Ga0307410_10011677
290 Ga0307410_10016650
291 Ga0307410_10020610
292 Ga0307410_10055994
293 Ga0307406_10010311
294 Ga0307406_10036901
295 Ga0307407_10014963
296 Ga0307407_10016346
297 Ga0307407_10069430
298 Ga0307407_10113239
299 Ga0307409_100027791
300 Ga0307409_100031112
301 Ga0307409_100114618
302 Ga0307409_100126345
303 Ga0307416_100021679
304 Ga0307416_100156182
305 Ga0307416_100258394
306 Ga0307414_10010747
307 Ga0307414_10013687
308 Ga0307414_10068343
309 Ga0307411_10002697
310 Ga0307411_10004258
311 Ga0307411_10082761
312 Ga0307415_100027808
313 Ga0307415_100145631
314 Ga0316582_0123715
315 Ga0395901_0027207
316 Ga0400489_16079
317 Ga0451839_1171757
318 Ga0451577_0001279
319 Ga0451577_0012237
320 Ga0451577_0213954
321 Ga0453683_0021992
322 Ga0453684_0002637
323 Ga0453684_0004189
324 Ga0451576_0083150
325 Ga0451576_0222542
326 Ga0495643_0000013
327 Ga0495613_0055701
328 Ga0495674_0055205
329 Ga0495684_0010369
330 Ga0496102_0219362
331 Ga0496104_0053821
332 Ga0501034_0021122
333 Ga0501039_0048476
334 Ga0501040_0010402
335 Ga0501042_0121651
336 Ga0501046_0021050
337 Ga0501046_0042637
338 Ga0501048_0073002
339 Ga0501048_0126086
340 Ga0501067_0000489
341 Ga0501069_0000487
342 Ga0501070_0002433
343 Ga0501070_0115948
344 Ga0501071_0000837
345 Ga0501074_0007672
346 Ga0501074_0090221
347 Ga0501075_0014432
348 Ga0501075_0015958
349 Ga0501076_0120927
350 Ga0501077_0003434
351 Ga0501077_0007505
352 Ga0501209_014875
353 Ga0501247_002675
354 Ga0501249_003686
355 Ga0501079_0012201
356 Ga0501079_0034508
357 Ga0501079_0054752
358 Ga0501080_0006446
359 Ga0501080_0032539
360 Ga0501080_0113081
361 Ga0501080_0143636
362 Ga0501080_0228496
363 Ga0501081_0002247
364 Ga0501081_0074647
365 Ga0501081_0129077
366 Ga0501268_002132
367 Ga0501270_000949
368 Ga0501035_0059005
369 Ga0501045_0096493
370 Ga0501045_0111515
371 nmdc:mga05p37_207195_c1
372 nmdc:mga0n895_154464_c1
373 nmdc:mga0n895_41068_c1
374 nmdc:mga0n895_53928_c1
375 nmdc:mga0n895_7622_c1
376 nmdc:mga0rr50_66904_c1
377 nmdc:mga0rr50_79949_c1
378 nmdc:mga08x19_16467_c1
379 nmdc:mga08x19_38068_c1
380 nmdc:mga0a205_6199_c1
381 Ga0500628_000294
382 Ga0501084_0009920
383 Ga0501084_0021371
384 Ga0501084_0055751
385 Ga0501084_0127037
386 Ga0590071_016531
387 Ga0501082_0009616
388 Ga0501082_0084729
389 Ga0530510_0049502
390 Ga0530510_0215817

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13167

GTP-bdg_N

GTP-binding GTPase N-terminal

75

163

0.99

PF16360

GTP-bdg_M

GTP-binding GTPase Middle Region

165

243

0.99

PF01926

MMR_HSR1

50S ribosome-binding GTPase

248

367

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
8iyj-assembly1.cif.gz_D5 cryo-em structure of the 48-nm repeat doublet microtubule from mouse sperm 0.833 123 196
7bl6-assembly1.cif.gz_9 50s-obge-gmppnp particle 0.7991 197 362
8a57-assembly1.cif.gz_D cryo-em structure of hflxr bound to the listeria monocytogenes 50s ribosomal subunit. 0.7898 8 418
3lnn-assembly1.cif.gz_A crystal structure of zneb from cupriavidus metallidurans 0.7887 119 186
7o9k-assembly1.cif.gz_G human mitochondrial ribosome large subunit assembly intermediate with mterf4-nsun4, mrm2, mtg1, the malsu module, gtpbp5 and mtef-tu 0.7884 197 363
ID Description Score Start End Superfamily
af_Q2R1U5_146_245_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9847 27 118 3.40.50.11060
af_Q2FYY9_24_121_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9684 28 116 3.40.50.11060
af_O33230_82_179_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9534 19 117 3.40.50.11060
af_P25519_16_114_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9404 21 118 3.40.50.11060
af_O33230_82_179_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9346 19 117 3.40.50.11060
ID Description Score Start End GO Terms
AF-A0A257SFL2-F1-model_v4 GTPase HflX N-terminal domain-containing protein 0.9767 27 120 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A482SCV4-F1-model_v4 deleted 0.964 9 104
AF-X1G2X4-F1-model_v4 GTPase HflX N-terminal domain-containing protein 0.9614 49 133 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A350W5Y5-F1-model_v4 GTPase HflX 0.9597 8 115 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A257SFL2-F1-model_v4 GTPase HflX N-terminal domain-containing protein 0.9469 27 120 GO:0005525
GO:0005737
GO:0043022
GO:0046872

Map