F299933

General Info

Members Datasets Scaffolds Average Seq Length
195 136 390 538

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100002135|Ga0075428_10000213513
Length 577
Sequence MSKAVSTPDTLAPNAYRLLWGGFMAILAAGVGFAIRGGFLDNWGAEFGFTSKELGDISGMGFTGFCFGIIIGGVICDKIGYGKLVIAAFLLHILSAVITFAPVPGMSKSTVYLLLASGSFLFAFANGTLEAVANPLIATLFFHNRTHYLNILHASWPAGLVLGSACGWLLDDFFPARFGIPVHWKLQFALFLVPTVLYGLMFFAQHFPKSEASQKGLSLGEMFKDVGILGSLVVGFLLAMFFGDMLLAPLLTPANASPEVAASRAQIASIIGYVIGGLFIVAVAMITRFSIGSILLFILFIAHALVGAVELGTDNWIQNITGNILTSEQGKGLFVFTSLTMFVLRFCADFIEKKIGLSPVGILLTCAILACLGLNLTSYVTTFGGALLALTVYGIGKTFFWPTMLAVASDRFPRTGAIAISIMGGIGMMSAGLIGAPGLGYAKDRFAGEALEKADPAAFAQYKAEKPSEFQPWTKLLPNVVPPKTGLDGKKFGEVQDKLKKLADQGKKDPKAAMNDLAPSERAVLEASIAGDRKTLVADSFIPGAMAVIYLGLLAYFAAIGGYKPVHIGEVKNSGGH

Samples

Sample ID Description Type Environment
1 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
75 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
79 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
83 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
84 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
85 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
86 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
87 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
88 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
89 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
90 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
91 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
92 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
93 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
97 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
98 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
99 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
100 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
101 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
102 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
103 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
104 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
105 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
108 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
109 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
114 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
115 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
116 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
117 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
118 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
119 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
120 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
121 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
122 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
123 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
124 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
125 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
126 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
127 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
128 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
129 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
132 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
133 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
134 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
135 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
136 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.49
Metatranscriptomes 0
Isolates 0.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.69
Nodule 0
Rhizoplane 0.51
Rhizosphere 90.26
Stem 0
Stem Tuber 0
Unclassified 10.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075428_100002135 3300006844 Bacteria 21344
2 rootH2_10027055 3300003320 Bacteria 13758
3 Ga0065704_10087837 3300005289 Bacteria 2990
4 Ga0065712_10088100 3300005290 Bacteria 2538
5 Ga0065707_10090515 3300005295 Bacteria 4125
6 Ga0070670_100001651 3300005331 Bacteria 18068
7 Ga0070670_100167304 3300005331 Bacteria 1907
8 Ga0070689_100001067 3300005340 Bacteria 17193
9 Ga0070689_100022987 3300005340 Bacteria 4662
10 Ga0070689_100103119 3300005340 Bacteria 2260
11 Ga0070669_100001018 3300005353 Bacteria 20415
12 Ga0070675_100057745 3300005354 Bacteria 3200
13 Ga0070688_100021798 3300005365 Unclassified 3746
14 Ga0070701_10058643 3300005438 Bacteria 2021
15 Ga0070694_100041291 3300005444 Bacteria 3077
16 Ga0070708_100110849 3300005445 Unclassified 2522
17 Ga0070707_100051415 3300005468 Bacteria 3951
18 Ga0070698_100082939 3300005471 Bacteria 3197
19 Ga0070684_100153192 3300005535 Unclassified 2089
20 Ga0068853_100000003 3300005539 Bacteria 434636
21 Ga0070672_100030721 3300005543 Bacteria 4039
22 Ga0070686_100003959 3300005544 Bacteria 8147
23 Ga0070686_100022272 3300005544 Bacteria 3772
24 Ga0070704_100051804 3300005549 Bacteria 2893
25 Ga0068855_100138699 3300005563 Bacteria 2773
26 Ga0070664_100030192 3300005564 Bacteria 4522
27 Ga0068857_100017844 3300005577 Bacteria 6223
28 Ga0068857_100138310 3300005577 Unclassified 2200
29 Ga0068852_100171553 3300005616 Bacteria 2034
30 Ga0068859_100022099 3300005617 Bacteria 6377
31 Ga0068859_100090523 3300005617 Bacteria 3110
32 Ga0068863_100068281 3300005841 Bacteria 3363
33 Ga0068858_100036570 3300005842 Bacteria 4552
34 Ga0068860_100083334 3300005843 Bacteria 3041
35 Ga0068862_100107451 3300005844 Bacteria 2447
36 Ga0068862_100140892 3300005844 Bacteria 2140
37 Ga0075364_10013611 3300006051 Bacteria 5007
38 Ga0075364_10014232 3300006051 Bacteria 4911
39 Ga0075362_10002947 3300006177 Bacteria 5842
40 Ga0075367_10021825 3300006178 Bacteria 3584
41 Ga0075367_10030841 3300006178 Bacteria 3076
42 Ga0097621_100029123 3300006237 Bacteria 4359
43 Ga0075370_10022155 3300006353 Bacteria 3485
44 Ga0068871_100031967 3300006358 Bacteria 4152
45 Ga0075428_100000769 3300006844 Bacteria 33377
46 Ga0075428_100003743 3300006844 Bacteria 16685
47 Ga0075428_100024129 3300006844 Bacteria 6728
48 Ga0075428_100179533 3300006844 Unclassified 2292
49 Ga0075428_100239985 3300006844 Unclassified 1955
50 Ga0075430_100040510 3300006846 Bacteria 3943
51 Ga0075431_100066805 3300006847 Unclassified 3713
52 Ga0075431_100091373 3300006847 Bacteria 3142
53 Ga0075431_100096546 3300006847 Bacteria 3051
54 Ga0075431_100097824 3300006847 Bacteria 3030
55 Ga0075433_10023540 3300006852 Bacteria 5186
56 Ga0075433_10030318 3300006852 Bacteria 4614
57 Ga0075429_100018302 3300006880 Bacteria 6065
58 Ga0075429_100074557 3300006880 Unclassified 2956
59 Ga0097620_100022100 3300006931 Bacteria 6377
60 Ga0097620_100090522 3300006931 Bacteria 3110
61 Ga0075435_100048149 3300007076 Bacteria 3424
62 Ga0105240_10000070 3300009093 Bacteria 204666
63 Ga0111539_10000638 3300009094 Bacteria 45252
64 Ga0111539_10014703 3300009094 Bacteria 9766
65 Ga0111539_10041669 3300009094 Bacteria 5519
66 Ga0111539_10043221 3300009094 Bacteria 5403
67 Ga0111539_10057949 3300009094 Bacteria 4597
68 Ga0111539_10141326 3300009094 Bacteria 2818
69 Ga0111539_10153136 3300009094 Bacteria 2698
70 Ga0114129_10071263 3300009147 Bacteria 4846
71 Ga0105242_10093875 3300009176 Unclassified 2530
72 Ga0105237_10007007 3300009545 Bacteria 12415
73 Ga0105238_10000261 3300009551 Bacteria 58965
74 Ga0105249_10009175 3300009553 Bacteria 8648
75 Ga0105239_10018967 3300010375 Bacteria 7603
76 Ga0157373_10003244 3300013100 Bacteria 12295
77 Ga0157370_10000643 3300013104 Bacteria 43469
78 Ga0157374_10039208 3300013296 Unclassified 4360
79 Ga0157375_10072005 3300013308 Bacteria 3471
80 Ga0163163_10098295 3300014325 Bacteria 2948
81 Ga0207688_10070659 3300025901 Bacteria 1980
82 Ga0207705_10046780 3300025909 Unclassified 3111
83 Ga0207695_10000155 3300025913 Bacteria 204627
84 Ga0207681_10008748 3300025923 Bacteria 6185
85 Ga0207694_10011892 3300025924 Bacteria 6564
86 Ga0207670_10014417 3300025936 Bacteria 4692
87 Ga0207679_10013971 3300025945 Bacteria 5266
88 Ga0207667_10003763 3300025949 Bacteria 18695
89 Ga0207712_10005739 3300025961 Bacteria 7824
90 Ga0207639_10000002 3300026041 Bacteria 903066
91 Ga0207641_10102543 3300026088 Bacteria 2523
92 Ga0207674_10025884 3300026116 Bacteria 6245
93 Ga0207674_10110718 3300026116 Unclassified 2720
94 Ga0207675_100010638 3300026118 Bacteria 8620
95 Ga0209974_10026306 3300027876 Bacteria 1926
96 Ga0207428_10007767 3300027907 Bacteria 9760
97 Ga0207428_10056318 3300027907 Bacteria 3124
98 Ga0268265_10012735 3300028380 Bacteria 5708
99 Ga0268265_10156374 3300028380 Bacteria 1930
100 Ga0265331_10011281 3300031250 Bacteria 4899
101 Ga0265327_10001249 3300031251 Bacteria 33889
102 Ga0265327_10004747 3300031251 Bacteria 11850
103 Ga0265327_10038823 3300031251 Bacteria 2593
104 Ga0307408_100005121 3300031548 Bacteria 8798
105 Ga0307408_100007136 3300031548 Bacteria 7395
106 Ga0307408_100018328 3300031548 Bacteria 4697
107 Ga0307508_10000238 3300031616 Bacteria 66847
108 Ga0307405_10025769 3300031731 Unclassified 3381
109 Ga0307410_10131680 3300031852 Bacteria 1838
110 Ga0307406_10000891 3300031901 Bacteria 16778
111 Ga0307406_10059487 3300031901 Bacteria 2460
112 Ga0307407_10000062 3300031903 Bacteria 43369
113 Ga0307412_10055200 3300031911 Unclassified 2641
114 Ga0307412_10137428 3300031911 Bacteria 1785
115 Ga0307409_100051278 3300031995 Bacteria 3156
116 Ga0307416_100010455 3300032002 Bacteria 6129
117 Ga0307416_100125699 3300032002 Bacteria 2297
118 Ga0307414_10004665 3300032004 Bacteria 7469
119 Ga0307414_10054961 3300032004 Bacteria 2785
120 Ga0373946_0018087 3300035171 Unclassified 2702
121 Ga0395905_0074553 3300037471 Bacteria 3180
122 Ga0395905_0143335 3300037471 Bacteria 2248
123 Ga0439449_0019080 3300042007 Bacteria 2572
124 Ga0450890_000040 3300042127 Bacteria 29254
125 Ga0450892_000029 3300042130 Bacteria 14776
126 Ga0439435_0009785 3300042436 Bacteria 2258
127 Ga0450893_0003894 3300042532 Bacteria 2367
128 Ga0451577_0053060 3300042876 Bacteria 3620
129 Ga0495592_0000231 3300046454 Bacteria 48322
130 Ga0495608_0001116 3300046511 Bacteria 19039
131 Ga0495618_0003576 3300046514 Bacteria 9626
132 Ga0495628_0000634 3300046516 Bacteria 32129
133 Ga0495630_0003030 3300046517 Bacteria 11653
134 Ga0495630_0064025 3300046517 Bacteria 2762
135 Ga0495643_0000442 3300046522 Bacteria 53564
136 Ga0495640_0002791 3300046533 Bacteria 14051
137 Ga0495586_0004238 3300046535 Bacteria 7672
138 Ga0495645_0013067 3300046543 Bacteria 5866
139 Ga0495667_0007472 3300046559 Bacteria 7410
140 Ga0495657_0105437 3300046675 Unclassified 1791
141 Ga0495599_0003061 3300046678 Bacteria 9729
142 Ga0495613_0067356 3300046689 Bacteria 2613
143 Ga0495624_0033544 3300046690 Bacteria 3325
144 Ga0495624_0045437 3300046690 Unclassified 2795
145 Ga0495674_0029983 3300047319 Bacteria 4949
146 Ga0495680_0139194 3300047322 Bacteria 1777
147 Ga0495684_0111849 3300047471 Bacteria 2060
148 Ga0496114_0118587 3300048917 Bacteria 2274
149 Ga0501298_004491 3300049521 Bacteria 2201
150 Ga0501033_0057794 3300049570 Bacteria 2866
151 Ga0501034_0005121 3300049571 Bacteria 14379
152 Ga0501034_0053593 3300049571 Bacteria 4061
153 Ga0501040_0019569 3300049576 Bacteria 4505
154 Ga0501070_0129493 3300049586 Bacteria 2085
155 Ga0501071_0029962 3300049587 Bacteria 3846
156 Ga0501072_0028041 3300049588 Bacteria 4396
157 Ga0501072_0120992 3300049588 Bacteria 2085
158 Ga0501227_000093 3300049665 Bacteria 14576
159 Ga0501080_0038787 3300049742 Bacteria 4446
160 Ga0501080_0060908 3300049742 Bacteria 3514
161 Ga0501080_0062719 3300049742 Unclassified 3459
162 Ga0501080_0217202 3300049742 Bacteria 1751
163 Ga0501081_0103712 3300049743 Bacteria 2012
164 Ga0501045_0058739 3300049824 Bacteria 2817
165 nmdc:mga03683_2600_c1 3300050489 Bacteria 5637
166 nmdc:mga00v17_18934_c1 3300050491 Bacteria 3920
167 nmdc:mga00v17_79211_c1 3300050491 Bacteria 2049
168 nmdc:mga0k408_37612_c1 3300050493 Bacteria 2779
169 nmdc:mga06z11_10363_c1 3300050494 Bacteria 3969
170 nmdc:mga06z11_12947_c1 3300050494 Bacteria 3644
171 nmdc:mga07m45_47516_c1 3300050496 Bacteria 1809
172 nmdc:mga05p37_129359_c1 3300050507 Bacteria 3099
173 nmdc:mga05p37_35396_c1 3300050507 Bacteria 6122
174 nmdc:mga09592_9354_c1 3300050508 Bacteria 7970
175 nmdc:mga0qj67_18875_c1 3300050509 Bacteria 5261
176 nmdc:mga06r32_141818_c1 3300050510 Bacteria 2380
177 nmdc:mga06r32_174346_c1 3300050510 Unclassified 2135
178 nmdc:mga06r32_18891_c1 3300050510 Bacteria 6320
179 nmdc:mga06r32_273735_c1 3300050510 Unclassified 1676
180 nmdc:mga06r32_7644_c1 3300050510 Bacteria 9719
181 nmdc:mga06r32_84168_c1 3300050510 Bacteria 3099
182 nmdc:mga08y16_186570_c1 3300050511 Bacteria 2152
183 nmdc:mga08y16_292274_c1 3300050511 Unclassified 1680
184 nmdc:mga08y16_43366_c1 3300050511 Bacteria 4714
185 nmdc:mga08y16_8217_c1 3300050511 Bacteria 10916
186 nmdc:mga0rr50_105735_c1 3300050513 Bacteria 2219
187 nmdc:mga0rr50_19040_c1 3300050513 Bacteria 4624
188 nmdc:mga0a205_70698_c1 3300050515 Bacteria 3073
189 nmdc:mga0a205_78758_c1 3300050515 Bacteria 3184
190 nmdc:mga0a205_90204_c1 3300050515 Bacteria 2962
191 Ga0500568_0005560 3300053139 Bacteria 6492
192 Ga0500616_0006834 3300053153 Bacteria 7377
193 Ga0501084_0105233 3300054114 Bacteria 2370
194 Ga0590075_004064 3300059424 Bacteria 3461
195 2687234107 2684623219 Bacteria 8442773
196 Ga0075428_100002135
197 rootH2_10027055
198 Ga0065704_10087837
199 Ga0065712_10088100
200 Ga0065707_10090515
201 Ga0070670_100001651
202 Ga0070670_100167304
203 Ga0070689_100001067
204 Ga0070689_100022987
205 Ga0070689_100103119
206 Ga0070669_100001018
207 Ga0070675_100057745
208 Ga0070688_100021798
209 Ga0070701_10058643
210 Ga0070694_100041291
211 Ga0070708_100110849
212 Ga0070707_100051415
213 Ga0070698_100082939
214 Ga0070684_100153192
215 Ga0068853_100000003
216 Ga0070672_100030721
217 Ga0070686_100003959
218 Ga0070686_100022272
219 Ga0070704_100051804
220 Ga0068855_100138699
221 Ga0070664_100030192
222 Ga0068857_100017844
223 Ga0068857_100138310
224 Ga0068852_100171553
225 Ga0068859_100022099
226 Ga0068859_100090523
227 Ga0068863_100068281
228 Ga0068858_100036570
229 Ga0068860_100083334
230 Ga0068862_100107451
231 Ga0068862_100140892
232 Ga0075364_10013611
233 Ga0075364_10014232
234 Ga0075362_10002947
235 Ga0075367_10021825
236 Ga0075367_10030841
237 Ga0097621_100029123
238 Ga0075370_10022155
239 Ga0068871_100031967
240 Ga0075428_100000769
241 Ga0075428_100003743
242 Ga0075428_100024129
243 Ga0075428_100179533
244 Ga0075428_100239985
245 Ga0075430_100040510
246 Ga0075431_100066805
247 Ga0075431_100091373
248 Ga0075431_100096546
249 Ga0075431_100097824
250 Ga0075433_10023540
251 Ga0075433_10030318
252 Ga0075429_100018302
253 Ga0075429_100074557
254 Ga0097620_100022100
255 Ga0097620_100090522
256 Ga0075435_100048149
257 Ga0105240_10000070
258 Ga0111539_10000638
259 Ga0111539_10014703
260 Ga0111539_10041669
261 Ga0111539_10043221
262 Ga0111539_10057949
263 Ga0111539_10141326
264 Ga0111539_10153136
265 Ga0114129_10071263
266 Ga0105242_10093875
267 Ga0105237_10007007
268 Ga0105238_10000261
269 Ga0105249_10009175
270 Ga0105239_10018967
271 Ga0157373_10003244
272 Ga0157370_10000643
273 Ga0157374_10039208
274 Ga0157375_10072005
275 Ga0163163_10098295
276 Ga0207688_10070659
277 Ga0207705_10046780
278 Ga0207695_10000155
279 Ga0207681_10008748
280 Ga0207694_10011892
281 Ga0207670_10014417
282 Ga0207679_10013971
283 Ga0207667_10003763
284 Ga0207712_10005739
285 Ga0207639_10000002
286 Ga0207641_10102543
287 Ga0207674_10025884
288 Ga0207674_10110718
289 Ga0207675_100010638
290 Ga0209974_10026306
291 Ga0207428_10007767
292 Ga0207428_10056318
293 Ga0268265_10012735
294 Ga0268265_10156374
295 Ga0265331_10011281
296 Ga0265327_10001249
297 Ga0265327_10004747
298 Ga0265327_10038823
299 Ga0307408_100005121
300 Ga0307408_100007136
301 Ga0307408_100018328
302 Ga0307508_10000238
303 Ga0307405_10025769
304 Ga0307410_10131680
305 Ga0307406_10000891
306 Ga0307406_10059487
307 Ga0307407_10000062
308 Ga0307412_10055200
309 Ga0307412_10137428
310 Ga0307409_100051278
311 Ga0307416_100010455
312 Ga0307416_100125699
313 Ga0307414_10004665
314 Ga0307414_10054961
315 Ga0373946_0018087
316 Ga0395905_0074553
317 Ga0395905_0143335
318 Ga0439449_0019080
319 Ga0450890_000040
320 Ga0450892_000029
321 Ga0439435_0009785
322 Ga0450893_0003894
323 Ga0451577_0053060
324 Ga0495592_0000231
325 Ga0495608_0001116
326 Ga0495618_0003576
327 Ga0495628_0000634
328 Ga0495630_0003030
329 Ga0495630_0064025
330 Ga0495643_0000442
331 Ga0495640_0002791
332 Ga0495586_0004238
333 Ga0495645_0013067
334 Ga0495667_0007472
335 Ga0495657_0105437
336 Ga0495599_0003061
337 Ga0495613_0067356
338 Ga0495624_0033544
339 Ga0495624_0045437
340 Ga0495674_0029983
341 Ga0495680_0139194
342 Ga0495684_0111849
343 Ga0496114_0118587
344 Ga0501298_004491
345 Ga0501033_0057794
346 Ga0501034_0005121
347 Ga0501034_0053593
348 Ga0501040_0019569
349 Ga0501070_0129493
350 Ga0501071_0029962
351 Ga0501072_0028041
352 Ga0501072_0120992
353 Ga0501227_000093
354 Ga0501080_0038787
355 Ga0501080_0060908
356 Ga0501080_0062719
357 Ga0501080_0217202
358 Ga0501081_0103712
359 Ga0501045_0058739
360 nmdc:mga03683_2600_c1
361 nmdc:mga00v17_18934_c1
362 nmdc:mga00v17_79211_c1
363 nmdc:mga0k408_37612_c1
364 nmdc:mga06z11_10363_c1
365 nmdc:mga06z11_12947_c1
366 nmdc:mga07m45_47516_c1
367 nmdc:mga05p37_129359_c1
368 nmdc:mga05p37_35396_c1
369 nmdc:mga09592_9354_c1
370 nmdc:mga0qj67_18875_c1
371 nmdc:mga06r32_141818_c1
372 nmdc:mga06r32_174346_c1
373 nmdc:mga06r32_18891_c1
374 nmdc:mga06r32_273735_c1
375 nmdc:mga06r32_7644_c1
376 nmdc:mga06r32_84168_c1
377 nmdc:mga08y16_186570_c1
378 nmdc:mga08y16_292274_c1
379 nmdc:mga08y16_43366_c1
380 nmdc:mga08y16_8217_c1
381 nmdc:mga0rr50_105735_c1
382 nmdc:mga0rr50_19040_c1
383 nmdc:mga0a205_70698_c1
384 nmdc:mga0a205_78758_c1
385 nmdc:mga0a205_90204_c1
386 Ga0500568_0005560
387 Ga0500616_0006834
388 Ga0501084_0105233
389 Ga0590075_004064
390 2687234107

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

22

321

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hpk-assembly1.cif.gz_A crystal structure of the bacterial oxalate transporter oxlt in an oxalate-bound occluded form 0.8265 15 435
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.8107 14 519
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.8025 14 519
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.7828 11 528
8g92-assembly1.cif.gz_A structure of inhibitor 16d-bound spns2 0.7821 12 526
ID Description Score Start End Superfamily
af_P60778_2_187_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9071 12 201 1.20.1250.20
af_P60778_2_187_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8889 12 201 1.20.1250.20
af_Q7JWI7_52_243_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8826 11 196 1.20.1250.20
af_P41036_15_224_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8823 11 204 1.20.1250.20
af_Q54UC8_60_259_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8796 15 200 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A090VH75-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.896 69 527 GO:0016020
GO:0022857
AF-A0A090VH75-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.875 69 527 GO:0016020
GO:0022857
AF-A0A815WEP6-F1-model_v4 Uncharacterized protein 0.8525 283 434 GO:0008028
GO:0016020
AF-A0A2V7XI38-F1-model_v4 MFS transporter 0.8515 24 332 GO:0016020
GO:0022857
AF-A0A6V8NNU3-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.8477 13 211 GO:0016020
GO:0022857

Map