F299881

General Info

Members Datasets Scaffolds Average Seq Length
195 93 193 252

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10047969|Ga0081539_100479693
Length 283
Sequence MSLRGVAPHATTKQSPRICGDCFGLAPRNDIRIIMSHTPILTIRNLSAVFPDNNGGLRALDRLSFDVHPREFVCVLGPSGSGKTTLLRILAGLLPPTSGSFMFGHVWKQPRIGMVFQQANLMPWRTVMDNIKLPLEVINVDEPTARLKAQDMIELVSLQGFEDSLPRDLSGGMAQRVAIARALIHDPDLLLLDEPFASLDAMTRERMWMELSRIWQARQKTVIMVTHSINESLFLADRVLVLTQRPGKVKLDLEVDLPRPRTDDMRYTPHFGELARKLREAIE

Samples

Sample ID Description Type Environment
1 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 2855730933 Achromobacter sp. HZ28 Isolate Nodule
4 2855767633 Achromobacter sp. HZ34 Isolate Nodule
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
34 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
40 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
41 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
42 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
43 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
44 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
45 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
46 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
47 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
48 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
49 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
50 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
51 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
52 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
53 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
54 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
55 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
56 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
57 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
58 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
59 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
60 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
61 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
62 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
63 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
68 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
76 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
77 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
78 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
79 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
80 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
81 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
82 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
83 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
84 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
85 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
86 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
87 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
88 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
89 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
90 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
91 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
92 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
93 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.97
Metatranscriptomes 0
Isolates 1.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.51
Nodule 1.03
Rhizoplane 0.51
Rhizosphere 97.44
Stem 0
Stem Tuber 0
Unclassified 0.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL3b_contig_4357335 2162886006 Unclassified 1058
2 SwRhRL2b_contig_1154756 2162886007 Bacteria 3194
3 JGI25406J46586_10016725 3300003203 Bacteria 3051
4 Ga0065704_10070714 3300005289 Bacteria 17199
5 Ga0065707_10082780 3300005295 Bacteria 12177
6 Ga0065707_10103586 3300005295 Bacteria 2740
7 Ga0070691_10075591 3300005341 Bacteria 1641
8 Ga0070703_10095222 3300005406 Bacteria 1040
9 Ga0070705_100209096 3300005440 Bacteria 1344
10 Ga0070700_100377945 3300005441 Unclassified 1058
11 Ga0070694_100030771 3300005444 Bacteria 3514
12 Ga0070694_100123277 3300005444 Unclassified 1862
13 Ga0070708_100552620 3300005445 Bacteria 1086
14 Ga0070707_100267461 3300005468 Bacteria 1663
15 Ga0070698_100015889 3300005471 Bacteria 7948
16 Ga0070698_100075871 3300005471 Bacteria 3365
17 Ga0070699_100004948 3300005518 Bacteria 11755
18 Ga0070699_100052331 3300005518 Bacteria 3534
19 Ga0070699_100086971 3300005518 Bacteria 2728
20 Ga0070699_100109191 3300005518 Bacteria 2428
21 Ga0070697_100022934 3300005536 Bacteria 4963
22 Ga0070695_100044209 3300005545 Bacteria 2834
23 Ga0070695_100243050 3300005545 Bacteria 1307
24 Ga0070696_100789308 3300005546 Bacteria 781
25 Ga0070704_100228375 3300005549 Bacteria 1517
26 Ga0068858_100249328 3300005842 Bacteria 1686
27 Ga0068862_100024750 3300005844 Bacteria 5037
28 Ga0068862_100359867 3300005844 Bacteria 1352
29 Ga0068862_100406275 3300005844 Bacteria 1275
30 Ga0068862_100555165 3300005844 Bacteria 1097
31 Ga0081539_10013075 3300005985 Bacteria 6294
32 Ga0081539_10047969 3300005985 Bacteria 2434
33 Ga0075428_100057422 3300006844 Bacteria 4260
34 Ga0075430_100428179 3300006846 Bacteria 1092
35 Ga0075431_100003068 3300006847 Bacteria 16176
36 Ga0075431_100070437 3300006847 Bacteria 3608
37 Ga0075433_10118510 3300006852 Bacteria 2350
38 Ga0075434_100063343 3300006871 Bacteria 3680
39 Ga0075434_100322409 3300006871 Bacteria 1565
40 Ga0075429_100014118 3300006880 Bacteria 6920
41 Ga0075429_100052474 3300006880 Bacteria 3548
42 Ga0114129_10030607 3300009147 Bacteria 7615
43 Ga0114129_10250918 3300009147 Bacteria 2375
44 Ga0114129_10431809 3300009147 Bacteria 1730
45 Ga0114129_10466143 3300009147 Unclassified 1655
46 Ga0114129_10477335 3300009147 Bacteria 1632
47 Ga0114129_10896617 3300009147 Bacteria 1124
48 Ga0114129_11279354 3300009147 Bacteria 910
49 Ga0105243_10239253 3300009148 Bacteria 1614
50 Ga0105243_10341019 3300009148 Bacteria 1373
51 Ga0105249_10328949 3300009553 Bacteria 1541
52 Ga0105246_10012286 3300011119 Bacteria 5339
53 Ga0105246_10260534 3300011119 Bacteria 1381
54 Ga0105246_10324611 3300011119 Unclassified 1252
55 Ga0207646_10124297 3300025922 Bacteria 2319
56 Ga0207703_10299481 3300026035 Bacteria 1466
57 Ga0207708_10205152 3300026075 Unclassified 1574
58 Ga0207674_10543406 3300026116 Bacteria 1122
59 Ga0268265_10121601 3300028380 Unclassified 2152
60 Ga0268265_10273995 3300028380 Bacteria 1507
61 Ga0265318_10023039 3300028577 Unclassified 2485
62 Ga0265322_10024818 3300028654 Bacteria 1715
63 Ga0265338_10063501 3300028800 Unclassified 3219
64 Ga0265324_10080249 3300029957 Unclassified 1110
65 Ga0265328_10024500 3300031239 Unclassified 2279
66 Ga0265320_10036155 3300031240 Unclassified 2497
67 Ga0265340_10011532 3300031247 Unclassified 4696
68 Ga0265331_10039523 3300031250 Unclassified 2300
69 Ga0265316_10012186 3300031344 Bacteria 7715
70 Ga0316575_10012669 3300031665 Bacteria 3141
71 Ga0316579_10051245 3300031691 Unclassified 1931
72 Ga0316579_10125457 3300031691 Bacteria 1235
73 Ga0316579_10263329 3300031691 Bacteria 834
74 Ga0316578_10050831 3300031728 Unclassified 2426
75 Ga0307413_10365588 3300031824 Bacteria 1119
76 Ga0307409_100048405 3300031995 Bacteria 3235
77 Ga0307416_100008836 3300032002 Bacteria 6537
78 Ga0307416_100504618 3300032002 Bacteria 1275
79 Ga0307411_10159829 3300032005 Bacteria 1686
80 Ga0373948_0016023 3300034817 Bacteria 1382
81 Ga0316574_0238776 3300035398 Bacteria 1162
82 Ga0316582_0265245 3300036647 Bacteria 1178
83 Ga0316584_0094457 3300036712 Bacteria 2239
84 Ga0316581_0011329 3300037588 Unclassified 2491
85 Ga0400489_44331 3300039093 Bacteria 2472
86 Ga0439453_0025330 3300041408 Bacteria 1094
87 Ga0451577_0006877 3300042876 Bacteria 11253
88 Ga0451577_0012873 3300042876 Bacteria 7851
89 Ga0451577_0027383 3300042876 Bacteria 5160
90 Ga0451577_0035466 3300042876 Bacteria 4493
91 Ga0451577_0069272 3300042876 Bacteria 3146
92 Ga0451577_0157514 3300042876 Bacteria 2044
93 Ga0451577_0181058 3300042876 Bacteria 1900
94 Ga0451577_0344746 3300042876 Bacteria 1351
95 Ga0451577_0353041 3300042876 Bacteria 1334
96 Ga0451577_0485496 3300042876 Bacteria 1122
97 Ga0451577_0504408 3300042876 Bacteria 1098
98 Ga0451577_0745203 3300042876 Bacteria 886
99 Ga0453683_0000596 3300044673 Bacteria 39938
100 Ga0453683_0004343 3300044673 Bacteria 10089
101 Ga0453683_0010928 3300044673 Bacteria 6002
102 Ga0453683_0028289 3300044673 Bacteria 3550
103 Ga0453683_0241176 3300044673 Bacteria 1151
104 Ga0453683_0265922 3300044673 Bacteria 1094
105 Ga0453683_0450774 3300044673 Bacteria 832
106 Ga0453684_0000012 3300044712 Bacteria 1062512
107 Ga0453684_0000056 3300044712 Bacteria 513389
108 Ga0453684_0000269 3300044712 Bacteria 223826
109 Ga0453684_0000894 3300044712 Bacteria 99515
110 Ga0453684_0001638 3300044712 Bacteria 60803
111 Ga0453684_0001993 3300044712 Bacteria 52373
112 Ga0453684_0002198 3300044712 Bacteria 48526
113 Ga0453684_0007295 3300044712 Bacteria 20455
114 Ga0453684_0013978 3300044712 Bacteria 12933
115 Ga0453684_0023022 3300044712 Bacteria 9206
116 Ga0453684_0045149 3300044712 Bacteria 5882
117 Ga0453684_0047479 3300044712 Bacteria 5694
118 Ga0453684_0052202 3300044712 Bacteria 5350
119 Ga0453684_0052364 3300044712 Bacteria 5339
120 Ga0453684_0058998 3300044712 Bacteria 4952
121 Ga0453684_0095258 3300044712 Bacteria 3659
122 Ga0453684_0097064 3300044712 Bacteria 3618
123 Ga0453684_0145265 3300044712 Bacteria 2826
124 Ga0453684_0176243 3300044712 Bacteria 2514
125 Ga0453684_0201230 3300044712 Bacteria 2321
126 Ga0453684_0214623 3300044712 Bacteria 2234
127 Ga0453684_0220497 3300044712 Bacteria 2197
128 Ga0453684_0252816 3300044712 Bacteria 2023
129 Ga0453684_0323123 3300044712 Bacteria 1747
130 Ga0453684_0508860 3300044712 Bacteria 1332
131 Ga0453684_0543711 3300044712 Bacteria 1280
132 Ga0453684_0596958 3300044712 Bacteria 1210
133 Ga0453684_0644367 3300044712 Bacteria 1157
134 Ga0453684_0665527 3300044712 Bacteria 1135
135 Ga0453684_1018732 3300044712 Bacteria 879
136 Ga0451576_0000152 3300045051 Bacteria 176305
137 Ga0451576_0009135 3300045051 Bacteria 11523
138 Ga0451576_0009557 3300045051 Bacteria 11230
139 Ga0451576_0010168 3300045051 Bacteria 10825
140 Ga0451576_0041652 3300045051 Bacteria 4854
141 Ga0451576_0124358 3300045051 Bacteria 2687
142 Ga0451576_0167660 3300045051 Bacteria 2292
143 Ga0466967_0144778 3300045976 Bacteria 2216
144 Ga0466967_0376524 3300045976 Bacteria 1378
145 Ga0466967_0791484 3300045976 Bacteria 941
146 Ga0496106_0313763 3300048909 Bacteria 1258
147 Ga0501034_0405168 3300049571 Bacteria 1286
148 Ga0501036_0086089 3300049572 Bacteria 2657
149 Ga0501037_0140360 3300049573 Bacteria 1730
150 Ga0501038_0244098 3300049574 Bacteria 1425
151 Ga0501040_0107356 3300049576 Bacteria 1951
152 Ga0501040_0152637 3300049576 Bacteria 1630
153 Ga0501042_0357282 3300049578 Bacteria 1057
154 Ga0501048_0492700 3300049582 Bacteria 879
155 Ga0501068_0324567 3300049584 Bacteria 987
156 Ga0501071_0062933 3300049587 Bacteria 2689
157 Ga0501071_0109079 3300049587 Bacteria 2045
158 Ga0501072_0106961 3300049588 Bacteria 2225
159 Ga0501072_0230705 3300049588 Bacteria 1475
160 Ga0501072_0719243 3300049588 Bacteria 784
161 Ga0501075_0003300 3300049591 Bacteria 10801
162 Ga0501075_0047628 3300049591 Bacteria 3221
163 Ga0501075_0069674 3300049591 Bacteria 2658
164 Ga0501075_0292170 3300049591 Bacteria 1242
165 Ga0501076_0010929 3300049592 Bacteria 6752
166 Ga0501076_0035397 3300049592 Bacteria 3907
167 Ga0501076_0079940 3300049592 Bacteria 2624
168 Ga0501076_0091242 3300049592 Bacteria 2451
169 Ga0501077_0078973 3300049593 Bacteria 2085
170 Ga0501079_0015098 3300049741 Bacteria 5889
171 Ga0501079_0481814 3300049741 Bacteria 975
172 Ga0501081_0105283 3300049743 Bacteria 1998
173 Ga0501045_0060753 3300049824 Bacteria 2771
174 nmdc:mga05p37_114661_c1 3300050507 Bacteria 3313
175 nmdc:mga05p37_704221_c1 3300050507 Bacteria 1121
176 nmdc:mga05p37_75088_c1 3300050507 Bacteria 4161
177 nmdc:mga09592_10797_c1 3300050508 Bacteria 7428
178 nmdc:mga09592_47742_c1 3300050508 Bacteria 3609
179 nmdc:mga09592_55534_c1 3300050508 Bacteria 3346
180 nmdc:mga09592_702286_c1 3300050508 Bacteria 861
181 nmdc:mga0qj67_532759_c1 3300050509 Bacteria 943
182 nmdc:mga06r32_161703_c1 3300050510 Bacteria 2221
183 nmdc:mga06r32_1850_c1 3300050510 Bacteria 18813
184 nmdc:mga0n895_729418_c1 3300050512 Bacteria 985
185 nmdc:mga0a205_163846_c1 3300050515 Bacteria 2119
186 Ga0500616_0018679 3300053153 Bacteria 3917
187 Ga0501084_0051649 3300054114 Bacteria 3441
188 Ga0501084_0383718 3300054114 Bacteria 1187
189 Ga0501082_0653221 3300060353 Bacteria 920
190 Ga0530510_0040379 3300061734 Bacteria 3367
191 Ga0530510_0186723 3300061734 Bacteria 1538
192 Ga0530510_0264781 3300061734 Bacteria 1282
193 Ga0530510_0357761 3300061734 Bacteria 1097

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031691 Ga0316579_10125457 Ga0316579_101254571 225
2 3300032002 Ga0307416_100008836 Ga0307416_1000088366 226
3 3300039093 Ga0400489_44331 Ga0400489_44331_1077_1841 229
4 3300049588 Ga0501072_0719243 Ga0501072_0719243_41_766 231
5 3300031691 Ga0316579_10263329 Ga0316579_102633291 232
6 3300044712 Ga0453684_0013978 Ga0453684_0013978_4810_5556 234
7 3300005844 Ga0068862_100555165 Ga0068862_1005551652 236
8 3300041408 Ga0439453_0025330 Ga0439453_0025330_146_904 237
9 3300036647 Ga0316582_0265245 Ga0316582_0265245_32_805 240
10 3300044673 Ga0453683_0004343 Ga0453683_0004343_7465_8229 240
11 3300044712 Ga0453684_0045149 Ga0453684_0045149_2106_2870 240
12 3300049587 Ga0501071_0109079 Ga0501071_0109079_1025_1783 242
13 3300049588 Ga0501072_0106961 Ga0501072_0106961_892_1650 242
14 3300049591 Ga0501075_0047628 Ga0501075_0047628_1075_1833 242
15 3300049592 Ga0501076_0035397 Ga0501076_0035397_378_1136 242
16 3300054114 Ga0501084_0383718 Ga0501084_0383718_235_993 242
17 3300060353 Ga0501082_0653221 Ga0501082_0653221_69_827 242
18 3300061734 Ga0530510_0264781 Ga0530510_0264781_380_1138 242
19 3300005844 Ga0068862_100359867 Ga0068862_1003598672 244
20 3300028380 Ga0268265_10273995 Ga0268265_102739952 244
21 3300045976 Ga0466967_0144778 Ga0466967_0144778_128_910 245
22 3300042876 Ga0451577_0012873 Ga0451577_0012873_2292_3032 246
23 3300042876 Ga0451577_0157514 Ga0451577_0157514_660_1400 246
24 3300044712 Ga0453684_0001638 Ga0453684_0001638_41114_41854 246
25 3300044712 Ga0453684_0001993 Ga0453684_0001993_23180_23926 246
26 3300045976 Ga0466967_0791484 Ga0466967_0791484_14_808 246
27 3300048909 Ga0496106_0313763 Ga0496106_0313763_241_1062 246
28 3300049571 Ga0501034_0405168 Ga0501034_0405168_234_1058 246
29 3300053153 Ga0500616_0018679 Ga0500616_0018679_77_895 246
30 3300005341 Ga0070691_10075591 Ga0070691_100755912 247
31 3300005406 Ga0070703_10095222 Ga0070703_100952222 247
32 3300005441 Ga0070700_100377945 Ga0070700_1003779451 247
33 3300005444 Ga0070694_100030771 Ga0070694_1000307713 247
34 3300005444 Ga0070694_100123277 Ga0070694_1001232772 247
35 3300005471 Ga0070698_100015889 Ga0070698_1000158892 247
36 3300005518 Ga0070699_100052331 Ga0070699_1000523314 247
37 3300005536 Ga0070697_100022934 Ga0070697_1000229344 247
38 3300005545 Ga0070695_100044209 Ga0070695_1000442092 247
39 3300005844 Ga0068862_100024750 Ga0068862_1000247503 247
40 3300006846 Ga0075430_100428179 Ga0075430_1004281792 247
41 3300006847 Ga0075431_100003068 Ga0075431_1000030685 247
42 3300006871 Ga0075434_100063343 Ga0075434_1000633433 247
43 3300009148 Ga0105243_10239253 Ga0105243_102392532 247
44 3300009553 Ga0105249_10328949 Ga0105249_103289492 247
45 3300011119 Ga0105246_10260534 Ga0105246_102605342 247
46 3300011119 Ga0105246_10324611 Ga0105246_103246112 247
47 3300026075 Ga0207708_10205152 Ga0207708_102051522 247
48 3300028380 Ga0268265_10121601 Ga0268265_101216012 247
49 3300031995 Ga0307409_100048405 Ga0307409_1000484054 247
50 3300032005 Ga0307411_10159829 Ga0307411_101598292 247
51 3300034817 Ga0373948_0016023 Ga0373948_0016023_345_1118 247
52 3300042876 Ga0451577_0006877 Ga0451577_0006877_8046_8789 247
53 3300042876 Ga0451577_0504408 Ga0451577_0504408_35_784 247
54 3300044712 Ga0453684_0000012 Ga0453684_0000012_700820_701563 247
55 3300044712 Ga0453684_0000894 Ga0453684_0000894_75640_76383 247
56 3300049572 Ga0501036_0086089 Ga0501036_0086089_1027_1800 247
57 3300049574 Ga0501038_0244098 Ga0501038_0244098_204_977 247
58 3300049576 Ga0501040_0152637 Ga0501040_0152637_449_1222 247
59 3300049582 Ga0501048_0492700 Ga0501048_0492700_75_848 247
60 3300049591 Ga0501075_0069674 Ga0501075_0069674_296_1069 247
61 3300049593 Ga0501077_0078973 Ga0501077_0078973_331_1104 247
62 3300050509 nmdc:mga0qj67_532759_c1 nmdc:mga0qj67_532759_c1_62_835 247
63 3300050510 nmdc:mga06r32_1850_c1 nmdc:mga06r32_1850_c1_12277_13050 247
64 3300054114 Ga0501084_0051649 Ga0501084_0051649_1690_2463 247
65 3300061734 Ga0530510_0040379 Ga0530510_0040379_1863_2636 247
66 3300061734 Ga0530510_0186723 Ga0530510_0186723_143_916 247
67 3300003203 JGI25406J46586_10016725 JGI25406J46586_100167252 248
68 3300005440 Ga0070705_100209096 Ga0070705_1002090961 248
69 3300005445 Ga0070708_100552620 Ga0070708_1005526201 248
70 3300005468 Ga0070707_100267461 Ga0070707_1002674611 248
71 3300005471 Ga0070698_100075871 Ga0070698_1000758712 248
72 3300005518 Ga0070699_100004948 Ga0070699_1000049484 248
73 3300005518 Ga0070699_100086971 Ga0070699_1000869712 248
74 3300005518 Ga0070699_100109191 Ga0070699_1001091912 248
75 3300005545 Ga0070695_100243050 Ga0070695_1002430502 248
76 3300005546 Ga0070696_100789308 Ga0070696_1007893081 248
77 3300005844 Ga0068862_100406275 Ga0068862_1004062752 248
78 3300005985 Ga0081539_10013075 Ga0081539_100130756 248
79 3300006844 Ga0075428_100057422 Ga0075428_1000574223 248
80 3300006847 Ga0075431_100070437 Ga0075431_1000704371 248
81 3300006852 Ga0075433_10118510 Ga0075433_101185102 248
82 3300006871 Ga0075434_100322409 Ga0075434_1003224091 248
83 3300006880 Ga0075429_100014118 Ga0075429_1000141183 248
84 3300006880 Ga0075429_100052474 Ga0075429_1000524743 248
85 3300009147 Ga0114129_10030607 Ga0114129_100306075 248
86 3300009147 Ga0114129_10250918 Ga0114129_102509182 248
87 3300009147 Ga0114129_10466143 Ga0114129_104661432 248
88 3300009147 Ga0114129_10477335 Ga0114129_104773352 248
89 3300009147 Ga0114129_10896617 Ga0114129_108966171 248
90 3300009147 Ga0114129_11279354 Ga0114129_112793542 248
91 3300009148 Ga0105243_10341019 Ga0105243_103410191 248
92 3300025922 Ga0207646_10124297 Ga0207646_101242973 248
93 3300026116 Ga0207674_10543406 Ga0207674_105434062 248
94 3300028654 Ga0265322_10024818 Ga0265322_100248182 248
95 3300031665 Ga0316575_10012669 Ga0316575_100126692 248
96 3300031691 Ga0316579_10051245 Ga0316579_100512452 248
97 3300031728 Ga0316578_10050831 Ga0316578_100508313 248
98 3300031824 Ga0307413_10365588 Ga0307413_103655881 248
99 3300032002 Ga0307416_100504618 Ga0307416_1005046182 248
100 3300035398 Ga0316574_0238776 Ga0316574_0238776_22_768 248
101 3300036712 Ga0316584_0094457 Ga0316584_0094457_1131_1907 248
102 3300037588 Ga0316581_0011329 Ga0316581_0011329_141_917 248
103 3300042876 Ga0451577_0027383 Ga0451577_0027383_801_1547 248
104 3300042876 Ga0451577_0069272 Ga0451577_0069272_146_892 248
105 3300042876 Ga0451577_0181058 Ga0451577_0181058_701_1459 248
106 3300042876 Ga0451577_0344746 Ga0451577_0344746_465_1211 248
107 3300042876 Ga0451577_0745203 Ga0451577_0745203_106_852 248
108 3300044673 Ga0453683_0000596 Ga0453683_0000596_15212_15958 248
109 3300044673 Ga0453683_0010928 Ga0453683_0010928_4034_4780 248
110 3300044673 Ga0453683_0028289 Ga0453683_0028289_2244_2999 248
111 3300044673 Ga0453683_0241176 Ga0453683_0241176_280_1035 248
112 3300044673 Ga0453683_0265922 Ga0453683_0265922_264_1010 248
113 3300044673 Ga0453683_0450774 Ga0453683_0450774_11_757 248
114 3300044712 Ga0453684_0000056 Ga0453684_0000056_42447_43205 248
115 3300044712 Ga0453684_0000269 Ga0453684_0000269_166558_167304 248
116 3300044712 Ga0453684_0002198 Ga0453684_0002198_34125_34871 248
117 3300044712 Ga0453684_0007295 Ga0453684_0007295_10992_11741 248
118 3300044712 Ga0453684_0023022 Ga0453684_0023022_2721_3467 248
119 3300044712 Ga0453684_0047479 Ga0453684_0047479_1894_2640 248
120 3300044712 Ga0453684_0052202 Ga0453684_0052202_867_1622 248
121 3300044712 Ga0453684_0052364 Ga0453684_0052364_2758_3504 248
122 3300044712 Ga0453684_0058998 Ga0453684_0058998_3027_3773 248
123 3300044712 Ga0453684_0095258 Ga0453684_0095258_32_799 248
124 3300044712 Ga0453684_0097064 Ga0453684_0097064_1873_2628 248
125 3300044712 Ga0453684_0145265 Ga0453684_0145265_1245_1991 248
126 3300044712 Ga0453684_0201230 Ga0453684_0201230_1338_2084 248
127 3300044712 Ga0453684_0214623 Ga0453684_0214623_180_959 248
128 3300044712 Ga0453684_0220497 Ga0453684_0220497_1182_1928 248
129 3300044712 Ga0453684_0252816 Ga0453684_0252816_458_1204 248
130 3300044712 Ga0453684_0508860 Ga0453684_0508860_420_1229 248
131 3300044712 Ga0453684_0543711 Ga0453684_0543711_180_926 248
132 3300044712 Ga0453684_0596958 Ga0453684_0596958_339_1085 248
133 3300044712 Ga0453684_0644367 Ga0453684_0644367_378_1124 248
134 3300044712 Ga0453684_0665527 Ga0453684_0665527_93_848 248
135 3300044712 Ga0453684_1018732 Ga0453684_1018732_20_775 248
136 3300045051 Ga0451576_0000152 Ga0451576_0000152_107210_107965 248
137 3300045051 Ga0451576_0009557 Ga0451576_0009557_2971_3717 248
138 3300045051 Ga0451576_0010168 Ga0451576_0010168_3403_4149 248
139 3300045051 Ga0451576_0124358 Ga0451576_0124358_1635_2381 248
140 3300045051 Ga0451576_0167660 Ga0451576_0167660_1046_1801 248
141 3300045976 Ga0466967_0376524 Ga0466967_0376524_97_894 248
142 3300049573 Ga0501037_0140360 Ga0501037_0140360_760_1578 248
143 3300049576 Ga0501040_0107356 Ga0501040_0107356_553_1299 248
144 3300049584 Ga0501068_0324567 Ga0501068_0324567_97_843 248
145 3300049587 Ga0501071_0062933 Ga0501071_0062933_812_1558 248
146 3300049588 Ga0501072_0230705 Ga0501072_0230705_541_1287 248
147 3300049591 Ga0501075_0003300 Ga0501075_0003300_2291_3037 248
148 3300049591 Ga0501075_0292170 Ga0501075_0292170_404_1150 248
149 3300049592 Ga0501076_0010929 Ga0501076_0010929_1070_1816 248
150 3300049592 Ga0501076_0079940 Ga0501076_0079940_370_1116 248
151 3300049741 Ga0501079_0015098 Ga0501079_0015098_1573_2319 248
152 3300049741 Ga0501079_0481814 Ga0501079_0481814_16_762 248
153 3300049743 Ga0501081_0105283 Ga0501081_0105283_1070_1816 248
154 3300049824 Ga0501045_0060753 Ga0501045_0060753_1529_2275 248
155 3300050507 nmdc:mga05p37_114661_c1 nmdc:mga05p37_114661_c1_2102_2848 248
156 3300050507 nmdc:mga05p37_704221_c1 nmdc:mga05p37_704221_c1_326_1072 248
157 3300050507 nmdc:mga05p37_75088_c1 nmdc:mga05p37_75088_c1_2439_3188 248
158 3300050508 nmdc:mga09592_10797_c1 nmdc:mga09592_10797_c1_2572_3318 248
159 3300050508 nmdc:mga09592_47742_c1 nmdc:mga09592_47742_c1_1440_2186 248
160 3300050508 nmdc:mga09592_55534_c1 nmdc:mga09592_55534_c1_2168_2914 248
161 3300050508 nmdc:mga09592_702286_c1 nmdc:mga09592_702286_c1_41_790 248
162 3300050510 nmdc:mga06r32_161703_c1 nmdc:mga06r32_161703_c1_247_993 248
163 3300050512 nmdc:mga0n895_729418_c1 nmdc:mga0n895_729418_c1_116_862 248
164 3300050515 nmdc:mga0a205_163846_c1 nmdc:mga0a205_163846_c1_442_1188 248
165 3300061734 Ga0530510_0357761 Ga0530510_0357761_122_868 248
166 3300028577 Ga0265318_10023039 Ga0265318_100230393 249
167 3300028800 Ga0265338_10063501 Ga0265338_100635012 249
168 3300029957 Ga0265324_10080249 Ga0265324_100802491 249
169 3300031239 Ga0265328_10024500 Ga0265328_100245001 249
170 3300031240 Ga0265320_10036155 Ga0265320_100361552 249
171 3300031247 Ga0265340_10011532 Ga0265340_100115324 249
172 3300031250 Ga0265331_10039523 Ga0265331_100395233 249
173 3300031344 Ga0265316_10012186 Ga0265316_100121864 249
174 3300044712 Ga0453684_0323123 Ga0453684_0323123_773_1522 249
175 3300042876 Ga0451577_0353041 Ga0451577_0353041_173_925 250
176 3300045051 Ga0451576_0041652 Ga0451576_0041652_1609_2361 250
177 iso_pu_bacteria 2855730933 2855732277 250
178 iso_pu_bacteria 2855767633 2855768985 250
179 3300045051 Ga0451576_0009135 Ga0451576_0009135_6255_7043 251
180 3300049578 Ga0501042_0357282 Ga0501042_0357282_167_955 251
181 3300049592 Ga0501076_0091242 Ga0501076_0091242_719_1507 251
182 2162886006 SwRhRL3b_contig_4357335 SwRhRL3b_0461.00001010 252
183 2162886007 SwRhRL2b_contig_1154756 SwRhRL2b_0985.00004860 252
184 3300005289 Ga0065704_10070714 Ga0065704_100707144 252
185 3300005295 Ga0065707_10082780 Ga0065707_100827805 252
186 3300005295 Ga0065707_10103586 Ga0065707_101035863 252
187 3300005549 Ga0070704_100228375 Ga0070704_1002283752 252
188 3300005842 Ga0068858_100249328 Ga0068858_1002493282 252
189 3300005985 Ga0081539_10047969 Ga0081539_100479693 252
190 3300009147 Ga0114129_10431809 Ga0114129_104318092 252
191 3300011119 Ga0105246_10012286 Ga0105246_100122867 252
192 3300026035 Ga0207703_10299481 Ga0207703_102994812 252
193 3300042876 Ga0451577_0035466 Ga0451577_0035466_2718_3524 252
194 3300042876 Ga0451577_0485496 Ga0451577_0485496_325_1089 252
195 3300044712 Ga0453684_0176243 Ga0453684_0176243_1141_1947 252

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

60

197

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2awn-assembly2.cif.gz_C crystal structure of the adp-mg-bound e. coli malk (crystallized with atp-mg) 0.9574 30 223
7w7a-assembly2.cif.gz_E heme exporter in complex with mn-containing protoporphyrin ix, mn-anomalous data 0.9322 9 210
8ja7-assembly1.cif.gz_D cryo-em structure of mycobacterium tuberculosis lpqy-sugabc in complex with trehalose 0.9305 11 223
7cad-assembly1.cif.gz_D mycobacterium smegmatis sugabc complex 0.9276 11 225
7caf-assembly1.cif.gz_C mycobacterium smegmatis lpqy-sugabc complex in the pre-translocation state 0.9258 11 225
ID Description Score Start End Superfamily
af_Q57855_15_256_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9605 10 247 3.40.50.300
2awnC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9574 30 223 3.40.50.300
af_Q57855_15_256_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9411 10 247 3.40.50.300
af_Q47538_1_237_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9355 11 240 3.40.50.300
af_P9WQK5_1_219_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9322 8 210 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3D0CZM5-F1-model_v4 ABC transporter ATP-binding protein 0.9785 156 252 GO:0005524
AF-A0A522VKF9-F1-model_v4 ABC transporter ATP-binding protein 0.9766 6 251 GO:0005524
GO:0005886
GO:0016887
AF-A0A5E7A1A4-F1-model_v4 Bicarbonate transport ATP-binding protein CmpD (EC 3.6.3.-) 0.9736 144 251 GO:0005524
GO:0016787
AF-Q9AKT5-F1-model_v4 Putative ABC-transporter 0.9727 41 251 GO:0005524
GO:0016887
AF-A0A4Q5UEI8-F1-model_v4 deleted 0.9701 117 251

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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