F298768

General Info

Members Datasets Scaffolds Average Seq Length
194 71 194 370

Family's Representative Sequence

Representative Sequence 3300025935|Ga0207709_10146653|Ga0207709_101466532
Length 416
Sequence MPTEYTLRTRGDIIHKIATEITESLEKALILCTLWQIKEFFVADPRVVNFAKVLVEHSARVVPGDRVLIEATTAAESLVRELYIQILDKGGHPHPMIGFPGMVPFIQDDLYLTYAKDTQLDFVPTFHKIGYDQFEGRIRIHSATNTRATTNLDPVKAQRRGKATSTITESQMRRGAEGVFKWVTTLYPTDAYAQDAGMSLKEYEDFVFGAVHAHEENPIAYWQSTATGQQKAIGFLAGKSQVVMHGPNVDLTLSIKGRKFMNSTGMYNMPDGEIFTGPVEDSVNGWVKFTYPAIYGGVAVEGAELTFVRGRVEQAKAEKNQEYLIKMLESDSGSRYLGEYAIGTNFDINKFTGNILFDEKIGGTFHMALGAGYPETGSHNKSAIHWDMICDLRTDSEILVDGELFYKNGQFVFGDK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
12 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
13 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
23 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
24 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
25 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
26 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
34 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
35 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
36 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
37 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
38 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
39 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
40 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
41 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
42 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
43 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
44 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
45 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
46 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
47 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
48 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
49 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
50 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
51 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
52 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
53 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
54 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
55 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
56 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
57 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
58 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
59 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
60 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
61 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
63 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
64 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
65 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
66 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
67 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
68 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
69 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
70 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
71 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.45
Metatranscriptomes 1.55
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 97.94
Stem 0
Stem Tuber 0
Unclassified 2.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_222856 2162886007 Bacteria 8300
2 JGI25406J46586_10034630 3300003203 Bacteria 1850
3 Ga0065704_10070791 3300005289 Bacteria 16076
4 Ga0065715_10133807 3300005293 Bacteria 1966
5 Ga0065707_10081744 3300005295 Bacteria 52385
6 Ga0065707_10089952 3300005295 Bacteria 4245
7 Ga0065707_10115101 3300005295 Bacteria 2277
8 Ga0070700_100033560 3300005441 Bacteria 3092
9 Ga0070706_100069985 3300005467 Bacteria 3245
10 Ga0070706_100228504 3300005467 Bacteria 1737
11 Ga0070698_100263009 3300005471 Unclassified 1657
12 Ga0070699_100003502 3300005518 Bacteria 13879
13 Ga0070699_100020576 3300005518 Bacteria 5693
14 Ga0070699_100095813 3300005518 Unclassified 2599
15 Ga0068855_100002644 3300005563 Bacteria 22095
16 Ga0068859_100239676 3300005617 Bacteria 1902
17 Ga0068859_100466589 3300005617 Bacteria 1358
18 Ga0068864_100131344 3300005618 Bacteria 2250
19 Ga0068861_100154908 3300005719 Bacteria 1884
20 Ga0068858_100060870 3300005842 Bacteria 3490
21 Ga0081539_10005676 3300005985 Bacteria 12524
22 Ga0081539_10010040 3300005985 Bacteria 7788
23 Ga0075428_100282550 3300006844 Unclassified 1786
24 Ga0075428_100542249 3300006844 Bacteria 1244
25 Ga0075431_100025738 3300006847 Bacteria 6030
26 Ga0075431_100101191 3300006847 Bacteria 2973
27 Ga0075431_100259998 3300006847 Bacteria 1762
28 Ga0075434_100250985 3300006871 Unclassified 1788
29 Ga0075429_100013296 3300006880 Bacteria 7138
30 Ga0075429_100033547 3300006880 Bacteria 4461
31 Ga0075429_100183443 3300006880 Unclassified 1834
32 Ga0075429_100195060 3300006880 Bacteria 1774
33 Ga0097620_100239684 3300006931 Bacteria 1902
34 Ga0097620_100466601 3300006931 Bacteria 1358
35 Ga0114129_10000979 3300009147 Bacteria 37398
36 Ga0114129_10072762 3300009147 Unclassified 4791
37 Ga0114129_10130913 3300009147 Bacteria 3446
38 Ga0114129_10130916 3300009147 Bacteria 3446
39 Ga0114129_10173164 3300009147 Archaea 2941
40 Ga0114129_10334166 3300009147 Bacteria 2011
41 Ga0105243_10276862 3300009148 Bacteria 1509
42 Ga0105249_10080529 3300009553 Unclassified 3025
43 Ga0105246_10066968 3300011119 Bacteria 2516
44 Ga0157380_10158089 3300014326 Bacteria 1967
45 Ga0207684_10177876 3300025910 Bacteria 1834
46 Ga0207646_10236175 3300025922 Unclassified 1652
47 Ga0207709_10146653 3300025935 Bacteria 1629
48 Ga0207667_10010103 3300025949 Bacteria 11062
49 Ga0207708_10044754 3300026075 Bacteria 3373
50 Ga0207676_10099584 3300026095 Bacteria 2406
51 Ga0207675_100113056 3300026118 Bacteria 2563
52 Ga0207675_100341229 3300026118 Bacteria 1466
53 Ga0265334_10017820 3300028573 Bacteria 2930
54 Ga0265318_10001495 3300028577 Bacteria 13640
55 Ga0265330_10007434 3300031235 Bacteria 5337
56 Ga0265330_10018628 3300031235 Bacteria 3188
57 Ga0265331_10096747 3300031250 Bacteria 1361
58 Ga0265316_10019919 3300031344 Bacteria 5723
59 Ga0265316_10131773 3300031344 Bacteria 1882
60 Ga0265316_10169466 3300031344 Bacteria 1629
61 Ga0307408_100126828 3300031548 Bacteria 1986
62 Ga0316575_10031522 3300031665 Bacteria 2075
63 Ga0316575_10055713 3300031665 Unclassified 1575
64 Ga0316579_10007553 3300031691 Bacteria 4495
65 Ga0316579_10016094 3300031691 Bacteria 3260
66 Ga0316579_10061436 3300031691 Bacteria 1769
67 Ga0265342_10051025 3300031712 Bacteria 2469
68 Ga0265342_10052713 3300031712 Bacteria 2423
69 Ga0316576_10009131 3300031727 Bacteria 6386
70 Ga0316576_10011523 3300031727 Bacteria 5798
71 Ga0316576_10026496 3300031727 Bacteria 4069
72 Ga0316576_10032137 3300031727 Bacteria 3728
73 Ga0316576_10042349 3300031727 Bacteria 3281
74 Ga0316576_10054340 3300031727 Unclassified 2921
75 Ga0316576_10057107 3300031727 Unclassified 2852
76 Ga0316576_10122668 3300031727 Bacteria 1952
77 Ga0316578_10001397 3300031728 Bacteria 9752
78 Ga0316578_10006782 3300031728 Bacteria 5680
79 Ga0316578_10010401 3300031728 Bacteria 4829
80 Ga0316578_10015541 3300031728 Bacteria 4096
81 Ga0316578_10034347 3300031728 Unclassified 2912
82 Ga0316578_10087354 3300031728 Bacteria 1860
83 Ga0316577_10003012 3300031733 Bacteria 8440
84 Ga0316577_10011875 3300031733 Bacteria 4730
85 Ga0316577_10016621 3300031733 Bacteria 4059
86 Ga0316577_10094376 3300031733 Unclassified 1675
87 Ga0316577_10182409 3300031733 Archaea 1186
88 Ga0307416_100335267 3300032002 Bacteria 1522
89 Ga0316583_10000008 3300032133 Bacteria 38959
90 Ga0316583_10010023 3300032133 Bacteria 3414
91 Ga0316585_10003925 3300032137 Bacteria 4115
92 Ga0316580_10000628 3300032139 Bacteria 8313
93 Ga0316593_10074114 3300032168 Unclassified 1180
94 Ga0316596_1020771 3300033541 Bacteria 1672
95 Ga0316596_1031151 3300033541 Unclassified 1385
96 Ga0316574_0004743 3300035398 Bacteria 7176
97 Ga0316574_0071233 3300035398 Bacteria 2195
98 Ga0316574_0118722 3300035398 Bacteria 1697
99 Ga0316574_0118754 3300035398 Unclassified 1697
100 Ga0316582_0003144 3300036647 Bacteria 8007
101 Ga0316582_0009648 3300036647 Bacteria 5246
102 Ga0316582_0011906 3300036647 Bacteria 4832
103 Ga0316582_0055657 3300036647 Unclassified 2522
104 Ga0316582_0064977 3300036647 Unclassified 2349
105 Ga0316582_0117495 3300036647 Unclassified 1777
106 Ga0316582_0143059 3300036647 Bacteria 1613
107 Ga0316584_0002820 3300036712 Bacteria 11139
108 Ga0316584_0005162 3300036712 Bacteria 8726
109 Ga0316584_0053884 3300036712 Unclassified 3010
110 Ga0316584_0056456 3300036712 Bacteria 2939
111 Ga0316584_0083684 3300036712 Bacteria 2390
112 Ga0316584_0128949 3300036712 Bacteria 1889
113 Ga0316584_0146999 3300036712 Bacteria 1756
114 Ga0316581_0000797 3300037588 Bacteria 6535
115 Ga0316581_0006012 3300037588 Bacteria 3194
116 Ga0316581_0044955 3300037588 Bacteria 1349
117 Ga0400489_06482 3300039093 Bacteria 2980
118 Ga0400489_16044 3300039093 Bacteria 2029
119 Ga0400489_44042 3300039093 Bacteria 35849
120 Ga0400487_56790 3300039110 Bacteria 3232
121 Ga0451577_0002445 3300042876 Bacteria 22138
122 Ga0451577_0008168 3300042876 Bacteria 10201
123 Ga0451577_0008393 3300042876 Bacteria 10055
124 Ga0451577_0051189 3300042876 Bacteria 3687
125 Ga0451577_0090102 3300042876 Bacteria 2737
126 Ga0451577_0236375 3300042876 Unclassified 1653
127 Ga0451577_0295951 3300042876 Bacteria 1467
128 Ga0451577_0309209 3300042876 Unclassified 1432
129 Ga0453683_0011964 3300044673 Bacteria 5701
130 Ga0453683_0015718 3300044673 Archaea 4895
131 Ga0453683_0018474 3300044673 Bacteria 4476
132 Ga0453684_0000035 3300044712 Bacteria 725956
133 Ga0453684_0000157 3300044712 Bacteria 304259
134 Ga0453684_0000232 3300044712 Bacteria 240951
135 Ga0453684_0000240 3300044712 Bacteria 235672
136 Ga0453684_0001800 3300044712 Bacteria 56885
137 Ga0453684_0002770 3300044712 Bacteria 41493
138 Ga0453684_0002878 3300044712 Bacteria 40371
139 Ga0453684_0002965 3300044712 Bacteria 39691
140 Ga0453684_0003714 3300044712 Bacteria 33783
141 Ga0453684_0008163 3300044712 Bacteria 18895
142 Ga0453684_0009229 3300044712 Bacteria 17325
143 Ga0453684_0009656 3300044712 Bacteria 16813
144 Ga0453684_0012883 3300044712 Bacteria 13700
145 Ga0453684_0017652 3300044712 Bacteria 11031
146 Ga0453684_0022517 3300044712 Bacteria 9341
147 Ga0453684_0064253 3300044712 Bacteria 4689
148 Ga0453684_0076631 3300044712 Bacteria 4197
149 Ga0453684_0099741 3300044712 Bacteria 3556
150 Ga0453684_0103844 3300044712 Bacteria 3471
151 Ga0453684_0113516 3300044712 Unclassified 3286
152 Ga0453684_0144882 3300044712 Bacteria 2831
153 Ga0453684_0153662 3300044712 Bacteria 2732
154 Ga0453684_0183740 3300044712 Bacteria 2452
155 Ga0453684_0214101 3300044712 Bacteria 2237
156 Ga0453684_0219306 3300044712 Bacteria 2205
157 Ga0453684_0244408 3300044712 Bacteria 2064
158 Ga0453684_0380275 3300044712 Unclassified 1585
159 Ga0453684_0437874 3300044712 Bacteria 1457
160 Ga0453684_0542311 3300044712 Bacteria 1282
161 Ga0451576_0000152 3300045051 Bacteria 176305
162 Ga0451576_0009885 3300045051 Bacteria 11019
163 Ga0451576_0013502 3300045051 Bacteria 9136
164 Ga0451576_0046985 3300045051 Bacteria 4541
165 Ga0451576_0049123 3300045051 Bacteria 4428
166 Ga0451576_0053083 3300045051 Bacteria 4247
167 Ga0451576_0053913 3300045051 Bacteria 4211
168 Ga0451576_0086957 3300045051 Bacteria 3251
169 Ga0451576_0111371 3300045051 Bacteria 2849
170 Ga0451576_0165584 3300045051 Bacteria 2307
171 Ga0451576_0520532 3300045051 Bacteria 1250
172 Ga0501034_0053000 3300049571 Bacteria 4087
173 Ga0501073_0001248 3300049589 Bacteria 18598
174 Ga0501073_0087594 3300049589 Bacteria 2165
175 Ga0501075_0018235 3300049591 Bacteria 5076
176 Ga0501076_0104867 3300049592 Bacteria 2281
177 Ga0501076_0119001 3300049592 Bacteria 2139
178 Ga0501079_0092290 3300049741 Bacteria 2346
179 Ga0501079_0231655 3300049741 Bacteria 1443
180 Ga0501080_0006915 3300049742 Bacteria 10232
181 nmdc:mga05p37_100586_c1 3300050507 Unclassified 3561
182 nmdc:mga05p37_341_c1 3300050507 Bacteria 50067
183 nmdc:mga05p37_476055_c1 3300050507 Bacteria 1440
184 nmdc:mga05p37_81491_c1 3300050507 Bacteria 3986
185 nmdc:mga09592_15024_c1 3300050508 Bacteria 6325
186 nmdc:mga09592_35349_c1 3300050508 Bacteria 4183
187 nmdc:mga09592_62934_c1 3300050508 Unclassified 3139
188 nmdc:mga0qj67_291874_c1 3300050509 Bacteria 1321
189 nmdc:mga06r32_171596_c1 3300050510 Bacteria 2153
190 nmdc:mga06r32_269226_c1 3300050510 Bacteria 1691
191 nmdc:mga06r32_64858_c1 3300050510 Bacteria 3522
192 Ga0501084_0000386 3300054114 Bacteria 33878
193 Ga0501084_0044128 3300054114 Bacteria 3732
194 Ga0501084_0281021 3300054114 Bacteria 1406

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300036712 Ga0316584_0128949 Ga0316584_0128949_815_1807 330
2 3300044712 Ga0453684_0076631 Ga0453684_0076631_3147_4175 342
3 3300031727 Ga0316576_10011523 Ga0316576_100115233 345
4 3300035398 Ga0316574_0118754 Ga0316574_0118754_161_1264 345
5 3300036647 Ga0316582_0117495 Ga0316582_0117495_317_1420 345
6 3300031691 Ga0316579_10061436 Ga0316579_100614362 351
7 3300006844 Ga0075428_100282550 Ga0075428_1002825501 352
8 3300009147 Ga0114129_10130913 Ga0114129_101309132 352
9 3300036712 Ga0316584_0053884 Ga0316584_0053884_1930_2994 354
10 3300036712 Ga0316584_0056456 Ga0316584_0056456_618_1682 354
11 3300044712 Ga0453684_0009656 Ga0453684_0009656_12107_13216 355
12 3300009147 Ga0114129_10130916 Ga0114129_101309162 359
13 3300009553 Ga0105249_10080529 Ga0105249_100805293 359
14 3300042876 Ga0451577_0008168 Ga0451577_0008168_53_1177 359
15 3300050507 nmdc:mga05p37_81491_c1 nmdc:mga05p37_81491_c1_1905_3056 359
16 3300042876 Ga0451577_0051189 Ga0451577_0051189_2433_3518 361
17 3300044673 Ga0453683_0018474 Ga0453683_0018474_2940_4025 361
18 3300044712 Ga0453684_0244408 Ga0453684_0244408_673_1758 361
19 3300045051 Ga0451576_0053083 Ga0451576_0053083_1416_2501 361
20 3300049591 Ga0501075_0018235 Ga0501075_0018235_3384_4469 361
21 3300049592 Ga0501076_0104867 Ga0501076_0104867_715_1800 361
22 3300049741 Ga0501079_0231655 Ga0501079_0231655_94_1179 361
23 3300054114 Ga0501084_0044128 Ga0501084_0044128_472_1557 361
24 3300036647 Ga0316582_0055657 Ga0316582_0055657_1158_2246 362
25 3300005563 Ga0068855_100002644 Ga0068855_1000026443 363
26 3300006847 Ga0075431_100101191 Ga0075431_1001011913 363
27 3300025949 Ga0207667_10010103 Ga0207667_1001010310 363
28 3300049592 Ga0501076_0119001 Ga0501076_0119001_101_1294 363
29 3300050510 nmdc:mga06r32_171596_c1 nmdc:mga06r32_171596_c1_322_1458 363
30 3300036712 Ga0316584_0083684 Ga0316584_0083684_532_1626 364
31 3300044712 Ga0453684_0214101 Ga0453684_0214101_552_1652 365
32 3300045051 Ga0451576_0013502 Ga0451576_0013502_5737_6837 365
33 3300045051 Ga0451576_0049123 Ga0451576_0049123_528_1631 365
34 3300009147 Ga0114129_10173164 Ga0114129_101731642 366
35 3300031727 Ga0316576_10054340 Ga0316576_100543402 366
36 3300031728 Ga0316578_10034347 Ga0316578_100343472 366
37 3300036647 Ga0316582_0064977 Ga0316582_0064977_313_1416 366
38 3300036647 Ga0316582_0143059 Ga0316582_0143059_466_1566 366
39 3300042876 Ga0451577_0236375 Ga0451577_0236375_317_1417 366
40 3300044712 Ga0453684_0000240 Ga0453684_0000240_233382_234482 366
41 3300031548 Ga0307408_100126828 Ga0307408_1001268282 367
42 3300031665 Ga0316575_10031522 Ga0316575_100315222 367
43 3300031691 Ga0316579_10007553 Ga0316579_100075535 367
44 3300031727 Ga0316576_10009131 Ga0316576_100091315 367
45 3300031727 Ga0316576_10026496 Ga0316576_100264962 367
46 3300031727 Ga0316576_10032137 Ga0316576_100321372 367
47 3300031727 Ga0316576_10042349 Ga0316576_100423491 367
48 3300031727 Ga0316576_10057107 Ga0316576_100571073 367
49 3300031728 Ga0316578_10001397 Ga0316578_100013974 367
50 3300031728 Ga0316578_10006782 Ga0316578_100067822 367
51 3300031728 Ga0316578_10015541 Ga0316578_100155413 367
52 3300031728 Ga0316578_10087354 Ga0316578_100873542 367
53 3300031733 Ga0316577_10003012 Ga0316577_100030122 367
54 3300031733 Ga0316577_10011875 Ga0316577_100118751 367
55 3300031733 Ga0316577_10094376 Ga0316577_100943761 367
56 3300031733 Ga0316577_10182409 Ga0316577_101824091 367
57 3300032133 Ga0316583_10000008 Ga0316583_1000000814 367
58 3300032133 Ga0316583_10010023 Ga0316583_100100233 367
59 3300032137 Ga0316585_10003925 Ga0316585_100039252 367
60 3300032139 Ga0316580_10000628 Ga0316580_100006282 367
61 3300032168 Ga0316593_10074114 Ga0316593_100741141 367
62 3300033541 Ga0316596_1020771 Ga0316596_10207712 367
63 3300033541 Ga0316596_1031151 Ga0316596_10311512 367
64 3300035398 Ga0316574_0004743 Ga0316574_0004743_691_1794 367
65 3300035398 Ga0316574_0071233 Ga0316574_0071233_714_1817 367
66 3300036647 Ga0316582_0009648 Ga0316582_0009648_1646_2755 367
67 3300036647 Ga0316582_0011906 Ga0316582_0011906_3038_4141 367
68 3300036712 Ga0316584_0002820 Ga0316584_0002820_277_1380 367
69 3300036712 Ga0316584_0005162 Ga0316584_0005162_5383_6486 367
70 3300036712 Ga0316584_0146999 Ga0316584_0146999_588_1712 367
71 3300037588 Ga0316581_0000797 Ga0316581_0000797_2912_4015 367
72 3300037588 Ga0316581_0006012 Ga0316581_0006012_2003_3112 367
73 3300037588 Ga0316581_0044955 Ga0316581_0044955_146_1270 367
74 3300039110 Ga0400487_56790 Ga0400487_56790_492_1601 367
75 3300042876 Ga0451577_0002445 Ga0451577_0002445_8638_9741 367
76 3300044712 Ga0453684_0000035 Ga0453684_0000035_299540_300643 367
77 3300044712 Ga0453684_0001800 Ga0453684_0001800_42153_43256 367
78 3300044712 Ga0453684_0003714 Ga0453684_0003714_2075_3184 367
79 3300044712 Ga0453684_0008163 Ga0453684_0008163_11464_12573 367
80 3300044712 Ga0453684_0183740 Ga0453684_0183740_612_1715 367
81 3300044712 Ga0453684_0380275 Ga0453684_0380275_172_1281 367
82 3300045051 Ga0451576_0000152 Ga0451576_0000152_148261_149364 367
83 3300045051 Ga0451576_0053913 Ga0451576_0053913_2503_3606 367
84 3300045051 Ga0451576_0165584 Ga0451576_0165584_1022_2125 367
85 3300049571 Ga0501034_0053000 Ga0501034_0053000_1933_3036 367
86 3300049589 Ga0501073_0001248 Ga0501073_0001248_521_1633 367
87 3300049589 Ga0501073_0087594 Ga0501073_0087594_104_1216 367
88 3300049741 Ga0501079_0092290 Ga0501079_0092290_366_1472 367
89 3300049742 Ga0501080_0006915 Ga0501080_0006915_6403_7506 367
90 3300054114 Ga0501084_0000386 Ga0501084_0000386_13840_14952 367
91 3300054114 Ga0501084_0281021 Ga0501084_0281021_159_1265 367
92 3300031665 Ga0316575_10055713 Ga0316575_100557132 368
93 3300035398 Ga0316574_0118722 Ga0316574_0118722_16_1125 368
94 3300044712 Ga0453684_0542311 Ga0453684_0542311_111_1217 368
95 3300031235 Ga0265330_10007434 Ga0265330_100074341 369
96 3300031235 Ga0265330_10018628 Ga0265330_100186284 369
97 3300031344 Ga0265316_10019919 Ga0265316_100199196 369
98 3300031344 Ga0265316_10131773 Ga0265316_101317731 369
99 3300031712 Ga0265342_10051025 Ga0265342_100510251 369
100 3300031712 Ga0265342_10052713 Ga0265342_100527132 369
101 3300031727 Ga0316576_10122668 Ga0316576_101226682 369
102 3300031728 Ga0316578_10010401 Ga0316578_100104017 369
103 3300031733 Ga0316577_10016621 Ga0316577_100166213 369
104 3300036647 Ga0316582_0003144 Ga0316582_0003144_5393_6502 369
105 3300039093 Ga0400489_06482 Ga0400489_06482_440_1549 369
106 3300039093 Ga0400489_16044 Ga0400489_16044_361_1470 369
107 3300039093 Ga0400489_44042 Ga0400489_44042_29714_30823 369
108 3300044712 Ga0453684_0002770 Ga0453684_0002770_28493_29605 369
109 3300014326 Ga0157380_10158089 Ga0157380_101580892 372
110 3300025922 Ga0207646_10236175 Ga0207646_102361752 372
111 3300042876 Ga0451577_0008393 Ga0451577_0008393_484_1602 372
112 3300044673 Ga0453683_0011964 Ga0453683_0011964_1606_2724 372
113 3300044712 Ga0453684_0012883 Ga0453684_0012883_10776_11894 372
114 3300044712 Ga0453684_0022517 Ga0453684_0022517_6780_7898 372
115 3300044712 Ga0453684_0153662 Ga0453684_0153662_1208_2326 372
116 3300044712 Ga0453684_0437874 Ga0453684_0437874_262_1380 372
117 3300031691 Ga0316579_10016094 Ga0316579_100160944 373
118 3300042876 Ga0451577_0309209 Ga0451577_0309209_169_1290 373
119 3300044712 Ga0453684_0002965 Ga0453684_0002965_12000_13121 373
120 3300044712 Ga0453684_0144882 Ga0453684_0144882_46_1167 373
121 2162886007 SwRhRL2b_contig_222856 SwRhRL2b_0930.00009600 374
122 3300003203 JGI25406J46586_10034630 JGI25406J46586_100346302 374
123 3300005289 Ga0065704_10070791 Ga0065704_100707919 374
124 3300005293 Ga0065715_10133807 Ga0065715_101338071 374
125 3300005295 Ga0065707_10081744 Ga0065707_1008174448 374
126 3300005295 Ga0065707_10089952 Ga0065707_100899522 374
127 3300005295 Ga0065707_10115101 Ga0065707_101151013 374
128 3300005441 Ga0070700_100033560 Ga0070700_1000335603 374
129 3300005467 Ga0070706_100069985 Ga0070706_1000699852 374
130 3300005467 Ga0070706_100228504 Ga0070706_1002285042 374
131 3300005471 Ga0070698_100263009 Ga0070698_1002630092 374
132 3300005518 Ga0070699_100003502 Ga0070699_1000035021 374
133 3300005518 Ga0070699_100020576 Ga0070699_1000205765 374
134 3300005518 Ga0070699_100095813 Ga0070699_1000958133 374
135 3300005617 Ga0068859_100239676 Ga0068859_1002396762 374
136 3300005617 Ga0068859_100466589 Ga0068859_1004665892 374
137 3300005618 Ga0068864_100131344 Ga0068864_1001313442 374
138 3300005719 Ga0068861_100154908 Ga0068861_1001549082 374
139 3300005842 Ga0068858_100060870 Ga0068858_1000608703 374
140 3300005985 Ga0081539_10005676 Ga0081539_100056767 374
141 3300005985 Ga0081539_10010040 Ga0081539_100100402 374
142 3300006844 Ga0075428_100542249 Ga0075428_1005422491 374
143 3300006847 Ga0075431_100025738 Ga0075431_1000257385 374
144 3300006847 Ga0075431_100259998 Ga0075431_1002599981 374
145 3300006871 Ga0075434_100250985 Ga0075434_1002509851 374
146 3300006880 Ga0075429_100013296 Ga0075429_1000132966 374
147 3300006880 Ga0075429_100033547 Ga0075429_1000335473 374
148 3300006880 Ga0075429_100183443 Ga0075429_1001834433 374
149 3300006880 Ga0075429_100195060 Ga0075429_1001950602 374
150 3300006931 Ga0097620_100239684 Ga0097620_1002396841 374
151 3300006931 Ga0097620_100466601 Ga0097620_1004666012 374
152 3300009147 Ga0114129_10000979 Ga0114129_1000097923 374
153 3300009147 Ga0114129_10072762 Ga0114129_100727624 374
154 3300009147 Ga0114129_10334166 Ga0114129_103341662 374
155 3300009148 Ga0105243_10276862 Ga0105243_102768622 374
156 3300011119 Ga0105246_10066968 Ga0105246_100669683 374
157 3300025910 Ga0207684_10177876 Ga0207684_101778762 374
158 3300025935 Ga0207709_10146653 Ga0207709_101466532 374
159 3300026075 Ga0207708_10044754 Ga0207708_100447542 374
160 3300026095 Ga0207676_10099584 Ga0207676_100995843 374
161 3300026118 Ga0207675_100113056 Ga0207675_1001130562 374
162 3300026118 Ga0207675_100341229 Ga0207675_1003412292 374
163 3300028573 Ga0265334_10017820 Ga0265334_100178202 374
164 3300028577 Ga0265318_10001495 Ga0265318_1000149510 374
165 3300031250 Ga0265331_10096747 Ga0265331_100967471 374
166 3300031344 Ga0265316_10169466 Ga0265316_101694661 374
167 3300032002 Ga0307416_100335267 Ga0307416_1003352671 374
168 3300042876 Ga0451577_0090102 Ga0451577_0090102_630_1754 374
169 3300042876 Ga0451577_0295951 Ga0451577_0295951_142_1266 374
170 3300044673 Ga0453683_0015718 Ga0453683_0015718_595_1719 374
171 3300044712 Ga0453684_0000157 Ga0453684_0000157_237804_238928 374
172 3300044712 Ga0453684_0000232 Ga0453684_0000232_148131_149255 374
173 3300044712 Ga0453684_0002878 Ga0453684_0002878_35401_36525 374
174 3300044712 Ga0453684_0009229 Ga0453684_0009229_8286_9410 374
175 3300044712 Ga0453684_0017652 Ga0453684_0017652_5809_6933 374
176 3300044712 Ga0453684_0064253 Ga0453684_0064253_635_1759 374
177 3300044712 Ga0453684_0099741 Ga0453684_0099741_815_1939 374
178 3300044712 Ga0453684_0103844 Ga0453684_0103844_2050_3174 374
179 3300044712 Ga0453684_0113516 Ga0453684_0113516_1950_3074 374
180 3300044712 Ga0453684_0219306 Ga0453684_0219306_17_1204 374
181 3300045051 Ga0451576_0009885 Ga0451576_0009885_8841_9968 374
182 3300045051 Ga0451576_0046985 Ga0451576_0046985_2881_4077 374
183 3300045051 Ga0451576_0086957 Ga0451576_0086957_1876_3003 374
184 3300045051 Ga0451576_0111371 Ga0451576_0111371_1211_2338 374
185 3300045051 Ga0451576_0520532 Ga0451576_0520532_110_1234 374
186 3300050507 nmdc:mga05p37_100586_c1 nmdc:mga05p37_100586_c1_880_2004 374
187 3300050507 nmdc:mga05p37_341_c1 nmdc:mga05p37_341_c1_33700_34860 374
188 3300050507 nmdc:mga05p37_476055_c1 nmdc:mga05p37_476055_c1_107_1255 374
189 3300050508 nmdc:mga09592_15024_c1 nmdc:mga09592_15024_c1_1066_2226 374
190 3300050508 nmdc:mga09592_35349_c1 nmdc:mga09592_35349_c1_2283_3407 374
191 3300050508 nmdc:mga09592_62934_c1 nmdc:mga09592_62934_c1_1337_2464 374
192 3300050509 nmdc:mga0qj67_291874_c1 nmdc:mga0qj67_291874_c1_59_1183 374
193 3300050510 nmdc:mga06r32_269226_c1 nmdc:mga06r32_269226_c1_67_1194 374
194 3300050510 nmdc:mga06r32_64858_c1 nmdc:mga06r32_64858_c1_2233_3357 374

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02073

Peptidase_M29

Thermophilic metalloprotease (M29)

43

411

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zjc-assembly1.cif.gz_A-2 aminopeptidase s from s. aureus 0.8764 5 374
1zjc-assembly1.cif.gz_A-2 aminopeptidase s from s. aureus 0.8655 5 374
4ics-assembly1.cif.gz_B crystal structure of peps from streptococcus pneumoniae in complex with a substrate 0.8511 5 371
2ayi-assembly1.cif.gz_A wild-type ampt from thermus thermophilus 0.8437 1 371
4icq-assembly1.cif.gz_B structural basis for substrate recognition and reaction mechanism of bacterial aminopeptidase peps 0.8385 5 371
ID Description Score Start End Superfamily
1zjcA01 Alpha Beta;3-Layer(aba) Sandwich;Thermophilic metalloprotease-like;Thermophilic metalloprotease (M29) 0.8395 5 171 3.40.1830.10
2wopA02 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.806 23 56 3.10.105.10
4icsB01 Alpha Beta;3-Layer(aba) Sandwich;Thermophilic metalloprotease-like;Thermophilic metalloprotease (M29) 0.7993 5 172 3.40.1830.10
2vxcA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;BRCT domain 0.7908 21 55 3.40.50.10190
af_Q2QVJ5_13_242_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.7817 6 60 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A661W991-F1-model_v4 Aminopeptidase 0.9934 240 371 GO:0004177
GO:0006508
GO:0046872
AF-A0A523QUT3-F1-model_v4 Aminopeptidase 0.9894 229 371 GO:0004177
GO:0006508
GO:0046872
AF-A0A3D4UHZ4-F1-model_v4 Aminopeptidase 0.989 245 371 GO:0004177
GO:0006508
GO:0046872
AF-A0A831P1G0-F1-model_v4 Aminopeptidase 0.9878 141 370 GO:0004177
GO:0006508
GO:0046872
AF-A0A2M8Q987-F1-model_v4 Aminopeptidase 0.9867 103 371 GO:0004177
GO:0006508
GO:0008237
GO:0046872

Feature Viewer

pLDDT pTM Quality
94.45 0.91 High
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Predicted Structure (AlphaFold2)

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