F298338

General Info

Members Datasets Scaffolds Average Seq Length
194 118 388 378

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100000157|Ga0070698_10000015716
Length 445
Sequence VGPRASRPPDVSADSESCALRTRAGGTPAVPQNHSTLDFRPWTISTYMTTNHSFDVAVVGAGVFGAWTAYLLSRAGAKVLLIDAYGPANSRASSGGESRIIRMGYGQDAIYTRMSQRSFASWQELFARINRPQLFQQTGVLWLAREDDSYCEATLKTFQQNNVKFERLELGELKRRYPQLELDQISWGILEPDSGILMARQAVQAVFAEALAAGVTYLAAAIRPAGTGEEGKSGKGQTKSHSRLESISTTTGREIVAGKFIFACGPWLPKLFPELLAGLIHVTRQEVFFLGVPAGDDRFNSPGMPTWMDINELTYCLPNLDNRGFKIAIDKHGPQFDPDSGERIVIPESIHAVRAYLARRVPSLRDAPVIESRVCQYENTSNGDFLIDRHPRFENAWLVGGGSGHGFKHGPAVGEYVTSLTSGNAESEVRFALATKEPAQERKVF

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
88 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
89 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
90 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
91 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
92 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
93 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300038699 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot26 Metagenome Rhizosphere
96 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
99 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
100 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
101 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
104 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
105 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
106 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
107 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
108 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
109 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
110 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
111 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
112 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
113 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
114 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
115 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
116 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
117 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
118 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.48
Metatranscriptomes 0.52
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.55
Rhizosphere 97.42
Stem 0
Stem Tuber 0
Unclassified 22.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100000157 3300005471 Bacteria 61949
2 MBSR1b_contig_11080172 2162886012 Unclassified 4042
3 JGI24751J29686_10000027 3300002459 Bacteria 95343
4 rootH2_10081203 3300003320 Unclassified 2262
5 Ga0065714_10064464 3300005288 Bacteria 65432
6 Ga0065704_10002012 3300005289 Bacteria 7470
7 Ga0065712_10000137 3300005290 Bacteria 65446
8 Ga0065712_10083100 3300005290 Bacteria 2862
9 Ga0065715_10010635 3300005293 Unclassified 2800
10 Ga0065715_10097061 3300005293 Bacteria 3771
11 Ga0065715_10117137 3300005293 Unclassified 2358
12 Ga0065707_10001478 3300005295 Bacteria 6767
13 Ga0065707_10091663 3300005295 Bacteria 3899
14 Ga0070676_10041096 3300005328 Bacteria 2680
15 Ga0070670_100000070 3300005331 Bacteria 103166
16 Ga0070670_100022943 3300005331 Bacteria 5369
17 Ga0070670_100046313 3300005331 Bacteria 3739
18 Ga0070670_100319284 3300005331 Unclassified 1360
19 Ga0070689_100068548 3300005340 Bacteria 2767
20 Ga0070687_100007259 3300005343 Bacteria 4607
21 Ga0070659_100282483 3300005366 Unclassified 1381
22 Ga0070701_10022750 3300005438 Bacteria 3009
23 Ga0070700_100021900 3300005441 Bacteria 3720
24 Ga0070700_100078933 3300005441 Unclassified 2120
25 Ga0070708_100002650 3300005445 Bacteria 13861
26 Ga0070681_10005287 3300005458 Bacteria 12466
27 Ga0070681_10295174 3300005458 Bacteria 1531
28 Ga0068867_100070413 3300005459 Bacteria 2615
29 Ga0070706_100084874 3300005467 Bacteria 2934
30 Ga0070698_100025159 3300005471 Bacteria 6203
31 Ga0070698_100031394 3300005471 Bacteria 5507
32 Ga0070698_100062563 3300005471 Bacteria 3754
33 Ga0070699_100003506 3300005518 Bacteria 13861
34 Ga0070699_100022459 3300005518 Bacteria 5438
35 Ga0070699_100158001 3300005518 Bacteria 2006
36 Ga0070679_100069593 3300005530 Unclassified 3510
37 Ga0070697_100000334 3300005536 Bacteria 37096
38 Ga0070697_100000465 3300005536 Bacteria 30980
39 Ga0070697_100046085 3300005536 Bacteria 3533
40 Ga0070697_100190988 3300005536 Unclassified 1738
41 Ga0068853_100097579 3300005539 Bacteria 2594
42 Ga0070686_100006532 3300005544 Bacteria 6489
43 Ga0070686_100153593 3300005544 Unclassified 1614
44 Ga0070695_100015635 3300005545 Bacteria 4582
45 Ga0070696_100033123 3300005546 Bacteria 3548
46 Ga0070704_100047607 3300005549 Bacteria 2998
47 Ga0068857_100488868 3300005577 Bacteria 1154
48 Ga0068854_100082498 3300005578 Unclassified 2377
49 Ga0068859_100015460 3300005617 Bacteria 7666
50 Ga0068859_100023925 3300005617 Bacteria 6129
51 Ga0068859_100056673 3300005617 Bacteria 3945
52 Ga0068859_100125018 3300005617 Bacteria 2640
53 Ga0068859_100179010 3300005617 Bacteria 2203
54 Ga0068859_100196876 3300005617 Unclassified 2099
55 Ga0068859_100197259 3300005617 Bacteria 2097
56 Ga0068864_100066875 3300005618 Bacteria 3120
57 Ga0068864_100111991 3300005618 Bacteria 2432
58 Ga0068864_100189345 3300005618 Bacteria 1885
59 Ga0068861_100037585 3300005719 Bacteria 3600
60 Ga0068861_100070161 3300005719 Bacteria 2713
61 Ga0068863_100041863 3300005841 Bacteria 4354
62 Ga0068863_100157333 3300005841 Bacteria 2176
63 Ga0068858_100070162 3300005842 Bacteria 3248
64 Ga0068858_100087039 3300005842 Unclassified 2905
65 Ga0068858_100146859 3300005842 Unclassified 2215
66 Ga0068860_100066152 3300005843 Unclassified 3433
67 Ga0068862_100038656 3300005844 Unclassified 4048
68 Ga0068862_100116260 3300005844 Bacteria 2353
69 Ga0070715_10000007 3300006163 Bacteria 192075
70 Ga0070716_100000002 3300006173 Bacteria 396037
71 Ga0097621_100012468 3300006237 Bacteria 6304
72 Ga0097621_100102204 3300006237 Unclassified 2413
73 Ga0097621_100155907 3300006237 Bacteria 1960
74 Ga0097621_100353210 3300006237 Unclassified 1308
75 Ga0068871_100001231 3300006358 Bacteria 17095
76 Ga0068871_100262091 3300006358 Bacteria 1508
77 Ga0075433_10136793 3300006852 Bacteria 2178
78 Ga0075434_100054634 3300006871 Bacteria 3967
79 Ga0097620_100015460 3300006931 Bacteria 7666
80 Ga0097620_100023925 3300006931 Bacteria 6129
81 Ga0097620_100056676 3300006931 Bacteria 3945
82 Ga0097620_100125015 3300006931 Bacteria 2640
83 Ga0097620_100179011 3300006931 Bacteria 2203
84 Ga0097620_100196871 3300006931 Unclassified 2099
85 Ga0097620_100197267 3300006931 Bacteria 2097
86 Ga0105251_10035518 3300009011 Bacteria 2459
87 Ga0111539_10006898 3300009094 Bacteria 14592
88 Ga0111539_10019628 3300009094 Bacteria 8339
89 Ga0111539_10139641 3300009094 Bacteria 2837
90 Ga0111539_10539027 3300009094 Bacteria 1359
91 Ga0105247_10001616 3300009101 Bacteria 15953
92 Ga0105247_10093744 3300009101 Bacteria 1909
93 Ga0114129_10211964 3300009147 Bacteria 2618
94 Ga0105243_10007207 3300009148 Bacteria 8544
95 Ga0105243_10318158 3300009148 Bacteria 1417
96 Ga0105241_10110209 3300009174 Bacteria 2202
97 Ga0105242_10043386 3300009176 Unclassified 3638
98 Ga0105242_10289545 3300009176 Unclassified 1491
99 Ga0105248_10162548 3300009177 Bacteria 2518
100 Ga0105237_10147527 3300009545 Unclassified 2347
101 Ga0105238_10008000 3300009551 Bacteria 10578
102 Ga0105238_10042849 3300009551 Bacteria 4581
103 Ga0105238_10086202 3300009551 Bacteria 3128
104 Ga0105249_10014335 3300009553 Bacteria 7010
105 Ga0105249_10110238 3300009553 Bacteria 2601
106 Ga0105249_10296775 3300009553 Unclassified 1619
107 Ga0105239_10039832 3300010375 Bacteria 5148
108 Ga0105246_10023627 3300011119 Unclassified 3980
109 Ga0105246_10080437 3300011119 Bacteria 2320
110 Ga0105246_10167795 3300011119 Bacteria 1678
111 Ga0105246_10232204 3300011119 Unclassified 1453
112 Ga0163162_10296970 3300013306 Unclassified 1747
113 Ga0157375_10247670 3300013308 Bacteria 1942
114 Ga0163163_10000087 3300014325 Bacteria 101689
115 Ga0163163_10033497 3300014325 Unclassified 4970
116 Ga0163163_10164765 3300014325 Bacteria 2262
117 Ga0157380_10108273 3300014326 Unclassified 2329
118 Ga0157380_10140829 3300014326 Unclassified 2072
119 Ga0157376_10187505 3300014969 Bacteria 1894
120 Ga0207710_10001152 3300025900 Bacteria 13476
121 Ga0207710_10065612 3300025900 Bacteria 1655
122 Ga0207647_10004642 3300025904 Bacteria 10180
123 Ga0207685_10000007 3300025905 Bacteria 278341
124 Ga0207645_10050083 3300025907 Bacteria 2667
125 Ga0207643_10000991 3300025908 Bacteria 16942
126 Ga0207707_10032266 3300025912 Bacteria 4585
127 Ga0207662_10010368 3300025918 Bacteria 5145
128 Ga0207646_10057653 3300025922 Bacteria 3470
129 Ga0207694_10020445 3300025924 Bacteria 5009
130 Ga0207694_10035549 3300025924 Bacteria 3823
131 Ga0207650_10000017 3300025925 Bacteria 354674
132 Ga0207650_10014250 3300025925 Bacteria 5524
133 Ga0207686_10067407 3300025934 Unclassified 2289
134 Ga0207709_10002446 3300025935 Bacteria 11659
135 Ga0207670_10009797 3300025936 Bacteria 5485
136 Ga0207665_10000007 3300025939 Bacteria 177869
137 Ga0207689_10007821 3300025942 Bacteria 9352
138 Ga0207689_10066826 3300025942 Bacteria 2955
139 Ga0207712_10003550 3300025961 Bacteria 9836
140 Ga0207712_10058682 3300025961 Bacteria 2720
141 Ga0207639_10159040 3300026041 Unclassified 1902
142 Ga0207708_10002919 3300026075 Bacteria 12590
143 Ga0207708_10012531 3300026075 Bacteria 6321
144 Ga0207708_10071505 3300026075 Bacteria 2658
145 Ga0207641_10066044 3300026088 Bacteria 3096
146 Ga0207641_10124991 3300026088 Bacteria 2301
147 Ga0207641_10265173 3300026088 Bacteria 1610
148 Ga0207648_10133438 3300026089 Bacteria 2186
149 Ga0207648_10134498 3300026089 Bacteria 2177
150 Ga0207674_10065289 3300026116 Bacteria 3669
151 Ga0207674_10091400 3300026116 Bacteria 3034
152 Ga0207674_10189420 3300026116 Unclassified 2007
153 Ga0207675_100057177 3300026118 Bacteria 3639
154 Ga0207675_100060947 3300026118 Unclassified 3522
155 Ga0207675_100087643 3300026118 Bacteria 2924
156 Ga0207675_100255994 3300026118 Bacteria 1696
157 Ga0207428_10005457 3300027907 Bacteria 11857
158 Ga0207428_10016950 3300027907 Bacteria 6260
159 Ga0268264_10033160 3300028381 Unclassified 4240
160 Ga0268264_10095194 3300028381 Bacteria 2576
161 Ga0268264_10120086 3300028381 Bacteria 2315
162 Ga0265760_10014865 3300031090 Bacteria 2232
163 Ga0307408_100017705 3300031548 Bacteria 4773
164 Ga0307407_10106199 3300031903 Bacteria 1754
165 Ga0307412_10250558 3300031911 Unclassified 1375
166 Ga0373940_0034656 3300035088 Bacteria 1363
167 Ga0373951_0000514 3300035091 Bacteria 11019
168 Ga0373942_0003132 3300035207 Unclassified 3914
169 Ga0395905_0368955 3300037471 Bacteria 1329
170 Ga0242422_00058 3300038699 Bacteria 4654
171 Ga0242420_001034 3300038996 Bacteria 3532
172 Ga0436365_1718398 3300039437 Unclassified 3799
173 Ga0439434_0008330 3300042435 Bacteria 3040
174 Ga0495663_0001220 3300046525 Bacteria 8246
175 Ga0495685_060491 3300047447 Bacteria 1277
176 Ga0496107_0051907 3300048910 Bacteria 2958
177 Ga0496110_0290607 3300048913 Bacteria 1489
178 Ga0496112_0212854 3300048915 Bacteria 1890
179 Ga0501202_001981 3300049652 Unclassified 3376
180 Ga0501207_002095 3300049654 Unclassified 2549
181 Ga0501216_001030 3300049660 Unclassified 3596
182 Ga0501217_000096 3300049661 Bacteria 10973
183 Ga0501223_003002 3300049663 Unclassified 3699
184 Ga0501227_001751 3300049665 Bacteria 4818
185 Ga0501233_005002 3300049668 Unclassified 2452
186 Ga0501239_003797 3300049672 Bacteria 1454
187 Ga0501225_0001530 3300049705 Bacteria 7263
188 Ga0501234_002289 3300049707 Bacteria 3022
189 Ga0501226_004005 3300049853 Unclassified 1722
190 nmdc:mga09592_460328_c1 3300050508 Bacteria 1097
191 nmdc:mga06r32_100178_c1 3300050510 Bacteria 2842
192 nmdc:mga08y16_28219_c1 3300050511 Bacteria 5916
193 nmdc:mga08y16_91736_c1 3300050511 Bacteria 3166
194 nmdc:mga0a205_184967_c1 3300050515 Bacteria 1977
195 Ga0070698_100000157
196 MBSR1b_contig_11080172
197 JGI24751J29686_10000027
198 rootH2_10081203
199 Ga0065714_10064464
200 Ga0065704_10002012
201 Ga0065712_10000137
202 Ga0065712_10083100
203 Ga0065715_10010635
204 Ga0065715_10097061
205 Ga0065715_10117137
206 Ga0065707_10001478
207 Ga0065707_10091663
208 Ga0070676_10041096
209 Ga0070670_100000070
210 Ga0070670_100022943
211 Ga0070670_100046313
212 Ga0070670_100319284
213 Ga0070689_100068548
214 Ga0070687_100007259
215 Ga0070659_100282483
216 Ga0070701_10022750
217 Ga0070700_100021900
218 Ga0070700_100078933
219 Ga0070708_100002650
220 Ga0070681_10005287
221 Ga0070681_10295174
222 Ga0068867_100070413
223 Ga0070706_100084874
224 Ga0070698_100025159
225 Ga0070698_100031394
226 Ga0070698_100062563
227 Ga0070699_100003506
228 Ga0070699_100022459
229 Ga0070699_100158001
230 Ga0070679_100069593
231 Ga0070697_100000334
232 Ga0070697_100000465
233 Ga0070697_100046085
234 Ga0070697_100190988
235 Ga0068853_100097579
236 Ga0070686_100006532
237 Ga0070686_100153593
238 Ga0070695_100015635
239 Ga0070696_100033123
240 Ga0070704_100047607
241 Ga0068857_100488868
242 Ga0068854_100082498
243 Ga0068859_100015460
244 Ga0068859_100023925
245 Ga0068859_100056673
246 Ga0068859_100125018
247 Ga0068859_100179010
248 Ga0068859_100196876
249 Ga0068859_100197259
250 Ga0068864_100066875
251 Ga0068864_100111991
252 Ga0068864_100189345
253 Ga0068861_100037585
254 Ga0068861_100070161
255 Ga0068863_100041863
256 Ga0068863_100157333
257 Ga0068858_100070162
258 Ga0068858_100087039
259 Ga0068858_100146859
260 Ga0068860_100066152
261 Ga0068862_100038656
262 Ga0068862_100116260
263 Ga0070715_10000007
264 Ga0070716_100000002
265 Ga0097621_100012468
266 Ga0097621_100102204
267 Ga0097621_100155907
268 Ga0097621_100353210
269 Ga0068871_100001231
270 Ga0068871_100262091
271 Ga0075433_10136793
272 Ga0075434_100054634
273 Ga0097620_100015460
274 Ga0097620_100023925
275 Ga0097620_100056676
276 Ga0097620_100125015
277 Ga0097620_100179011
278 Ga0097620_100196871
279 Ga0097620_100197267
280 Ga0105251_10035518
281 Ga0111539_10006898
282 Ga0111539_10019628
283 Ga0111539_10139641
284 Ga0111539_10539027
285 Ga0105247_10001616
286 Ga0105247_10093744
287 Ga0114129_10211964
288 Ga0105243_10007207
289 Ga0105243_10318158
290 Ga0105241_10110209
291 Ga0105242_10043386
292 Ga0105242_10289545
293 Ga0105248_10162548
294 Ga0105237_10147527
295 Ga0105238_10008000
296 Ga0105238_10042849
297 Ga0105238_10086202
298 Ga0105249_10014335
299 Ga0105249_10110238
300 Ga0105249_10296775
301 Ga0105239_10039832
302 Ga0105246_10023627
303 Ga0105246_10080437
304 Ga0105246_10167795
305 Ga0105246_10232204
306 Ga0163162_10296970
307 Ga0157375_10247670
308 Ga0163163_10000087
309 Ga0163163_10033497
310 Ga0163163_10164765
311 Ga0157380_10108273
312 Ga0157380_10140829
313 Ga0157376_10187505
314 Ga0207710_10001152
315 Ga0207710_10065612
316 Ga0207647_10004642
317 Ga0207685_10000007
318 Ga0207645_10050083
319 Ga0207643_10000991
320 Ga0207707_10032266
321 Ga0207662_10010368
322 Ga0207646_10057653
323 Ga0207694_10020445
324 Ga0207694_10035549
325 Ga0207650_10000017
326 Ga0207650_10014250
327 Ga0207686_10067407
328 Ga0207709_10002446
329 Ga0207670_10009797
330 Ga0207665_10000007
331 Ga0207689_10007821
332 Ga0207689_10066826
333 Ga0207712_10003550
334 Ga0207712_10058682
335 Ga0207639_10159040
336 Ga0207708_10002919
337 Ga0207708_10012531
338 Ga0207708_10071505
339 Ga0207641_10066044
340 Ga0207641_10124991
341 Ga0207641_10265173
342 Ga0207648_10133438
343 Ga0207648_10134498
344 Ga0207674_10065289
345 Ga0207674_10091400
346 Ga0207674_10189420
347 Ga0207675_100057177
348 Ga0207675_100060947
349 Ga0207675_100087643
350 Ga0207675_100255994
351 Ga0207428_10005457
352 Ga0207428_10016950
353 Ga0268264_10033160
354 Ga0268264_10095194
355 Ga0268264_10120086
356 Ga0265760_10014865
357 Ga0307408_100017705
358 Ga0307407_10106199
359 Ga0307412_10250558
360 Ga0373940_0034656
361 Ga0373951_0000514
362 Ga0373942_0003132
363 Ga0395905_0368955
364 Ga0242422_00058
365 Ga0242420_001034
366 Ga0436365_1718398
367 Ga0439434_0008330
368 Ga0495663_0001220
369 Ga0495685_060491
370 Ga0496107_0051907
371 Ga0496110_0290607
372 Ga0496112_0212854
373 Ga0501202_001981
374 Ga0501207_002095
375 Ga0501216_001030
376 Ga0501217_000096
377 Ga0501223_003002
378 Ga0501227_001751
379 Ga0501233_005002
380 Ga0501239_003797
381 Ga0501225_0001530
382 Ga0501234_002289
383 Ga0501226_004005
384 nmdc:mga09592_460328_c1
385 nmdc:mga06r32_100178_c1
386 nmdc:mga08y16_28219_c1
387 nmdc:mga08y16_91736_c1
388 nmdc:mga0a205_184967_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

58

123

0.94

PF01266

DAO

FAD dependent oxidoreductase

55

420

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
1mv8-assembly2.cif.gz_D 1.55 a crystal structure of a ternary complex of gdp-mannose dehydrogenase from psuedomonas aeruginosa 0.9976 6 35
8c79-assembly1.cif.gz_B crystal structure of leishmania donovani 6-phosphogluconate dehydrogenase complexed with nadph 0.9684 5 34
8i4n-assembly1.cif.gz_B crystal strcuture of 6-phosphogluconate dehydrogenase from corynebacterium glutamicum 0.963 5 35
2y0d-assembly1.cif.gz_B bcec mutation y10k 0.9614 5 35
6fqz-assembly1.cif.gz_B plasmodium falciparum 6-phosphogluconate dehydrogenase in its apo form, in complex with its cofactor nadp+ and in complex with its substrate 6-phosphogluconate 0.9588 5 35
ID Description Score Start End Superfamily
af_Q58454_1_196_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 1.01 6 35 3.40.50.720
1mfzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 1.001 6 35 3.40.50.720
5z2gB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9834 6 35 3.50.50.60
3ic9D03 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9817 6 33 3.50.50.60
af_Q4DU92_1_145_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9745 6 34 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2V8W525-F1-model_v4 FAD dependent oxidoreductase domain-containing protein 0.9827 3 377 GO:0008115
GO:0016020
GO:0050660
AF-A0A2V9DLJ7-F1-model_v4 FAD dependent oxidoreductase domain-containing protein 0.9825 2 377 GO:0008115
GO:0050660
AF-A0A2V9JLF7-F1-model_v4 FAD dependent oxidoreductase domain-containing protein 0.9809 82 376 GO:0008115
GO:0050660
AF-A0A2V9JLF7-F1-model_v4 FAD dependent oxidoreductase domain-containing protein 0.9777 82 376 GO:0008115
GO:0050660
AF-A0A359LRX2-F1-model_v4 FAD dependent oxidoreductase domain-containing protein 0.9733 1 377 GO:0008115
GO:0050660

Map